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At least 37 records · Page 2

Design and Performance of Kokkos Staging Space toward Scalable Resilient Application Couplings

With the growing number of applications designed for heterogeneous HPC devices, application programmers and users are finding it challenging to compose scalable workflows as ensembles of these applications, that are portable, performant and resilient. The Kokkos C++ library has been designed to simplify this cumbersome procedure by providing an intra-application uniform programming model and portable performance. However, assembling multiple Kokkos-enabled applications into a complex workflow is still a challenge. Although Kokkos enables a uniform programming model, the inter-application data exchange still remains a challenge from both performance and software development cost perspectives. In order to address this issue, we propose Kokkos data staging memory space, an extension of Kokkos' data abstraction (memory space) for heterogeneous computing systems. This new abstraction allows to express data on a virtual shared-space for multiple Kokkos applications, thus extending Kokkos to support inter-application data exchange to build an efficient application workflow. Additionally, we study the effectiveness of asynchronous data layout conversions for applications requiring different memory access patterns for the shared data. Our preliminary evaluation with a synthetic benchmark indicate the effectiveness of this conversion adapted to three different scenarios representing access frequency and use patterns of the shared data.

97 MATHEMATICS AND COMPUTING↗

Freeing Space for NASA: Incorporating a Lossless Compression Algorithm into NASA's FOSS System

NASA's Fiber Optic Strain Sensing (FOSS) system can gather and store up to 1,536,000 bytes (1.46 megabytes) per second. Since the FOSS system typically acquires hours - or even days - of data, the system can gather hundreds of gigabytes of data for a given test event. To store such large quantities of data more effectively, NASA is modifying a Lempel-Ziv-Oberhumer (LZO) lossless data compression program to compress data as it is being acquired in real time. After proving that the algorithm is capable of compressing the data from the FOSS system, the LZO program will be modified and incorporated into the FOSS system. Implementing an LZO compression algorithm will instantly free up memory space without compromising any data obtained. With the availability of memory space, the FOSS system can be used more efficiently on test specimens, such as Unmanned Aerial Vehicles (UAVs) that can be in flight for days. By integrating the compression algorithm, the FOSS system can continue gathering data, even on longer flights.

Fiechtner, Kaitlyn↗

Performance of CUDA Unified Memory in CMS Heterogeneous Pixel Reconstruction

The management of separate memory spaces of CPUs and GPUs brings an additional burden to the development of software for GPUs. To help with this, CUDA unified memory provides a single address space that can be accessed from both CPU and GPU. The automatic data transfer mechanism is based on page faults generated by the memory accesses. This mechanism has a performance cost, that can be with explicit memory prefetch requests. Various hints on the inteded usage of the memory regions can also be given to further improve the performance. The overall effect of unified memory compared to an explicit memory management can depend heavily on the application. In this paper we evaluate the performance impact of CUDA unified memory using the heterogeneous pixel reconstruction code from the CMS experiment as a realistic use case of a GPU-targeting HEP reconstruction software. We also compare the programming model using CUDA unified memory to the explicit management of separate CPU and GPU memory spaces.

Kortelainen, Matti J.↗

Enabling Scalable and Extensible Memory-mapped Datastores in Userspace

Exascale workloads are expected to incorporate data-intensive processing in close coordination with traditional physics simulations. These emerging scientific, data-analytics and machine learning applications need to access a wide variety of datastores in flat files and structured databases. Programmer productivity is greatly enhanced by mapping datastores into the application process's virtual memory space to provide a unified “in-memory” interface. Currently, memory mapping is provided by system software primarily designed for generality and reliability. However, scalability at high concurrency is a formidable challenge on exascale systems. Also, there is a need for extensibility to support new datastores potentially requiring HPC data transfer services. In this article, we present UMap , a scalable and extensible userspace service for memory-mapping datastores. Furthermore, through decoupled queue management, concurrency aware adaptation, and dynamic load balancing, UMap enables application performance to scale even at high concurrency. We evaluate UMap in data-intensive applications, including sorting, graph traversal, database operations, and metagenomic analytics. Our results show that UMap as a userspace service outperforms an optimized kernel-based service across a wide range of intra-node concurrency by 1.22-1.9 × . We performed two case studies to demonstrate UMap 's extensibility. First, a new datastore residing in remote memory is incorporated into UMap as an application-specific plugin. Second, we present a persistent memory allocator Metall built atop UMap for unified storage/memory.

97 MATHEMATICS AND COMPUTING↗

Radiation Performance of Memory Technologies for Space Applications

MRAM and DRAM memory technologies identified for possible radiation hardening were investigated for memory-array- and controller-level radiation sensitivity. TID and SEE performance of memory arrays and associated cells is good, but with some questions about viability of hardening of problematic control circuitry. Control-circuitry-related SEE problems are highlighted. TID data are focused on memory arrays only.

Some, Raphael↗

Spectral methods in time for hyperbolic equations

A pseudospectral numerical scheme for solving linear, periodic, hyperbolic problems is described. It has infinite accuracy both in time and in space. The high accuracy in time is achieved without increasing the computational work and memory space which is needed for a regular, one step explicit scheme. The algorithm is shown to be optimal in the sense that among all the explicit algorithms of a certain class it requires the least amount of work to achieve a certain given resolution. The class of algorithms referred to consists of all explicit schemes which may be represented as a polynomial in the spatial operator.

Tal-Ezer, H.↗

CoNNeCT Baseband Processor Module

A document describes the CoNNeCT Baseband Processor Module (BPM) based on an updated processor, memory technology, and field-programmable gate arrays (FPGAs). The BPM was developed from a requirement to provide sufficient computing power and memory storage to conduct experiments for a Software Defined Radio (SDR) to be implemented. The flight SDR uses the AT697 SPARC processor with on-chip data and instruction cache. The non-volatile memory has been increased from a 20-Mbit EEPROM (electrically erasable programmable read only memory) to a 4-Gbit Flash, managed by the RTAX2000 Housekeeper, allowing more programs and FPGA bit-files to be stored. The volatile memory has been increased from a 20-Mbit SRAM (static random access memory) to a 1.25-Gbit SDRAM (synchronous dynamic random access memory), providing additional memory space for more complex operating systems and programs to be executed on the SPARC. All memory is EDAC (error detection and correction) protected, while the SPARC processor implements fault protection via TMR (triple modular redundancy) architecture. Further capability over prior BPM designs includes the addition of a second FPGA to implement features beyond the resources of a single FPGA. Both FPGAs are implemented with Xilinx Virtex-II and are interconnected by a 96-bit bus to facilitate data exchange. Dedicated 1.25- Gbit SDRAMs are wired to each Xilinx FPGA to accommodate high rate data buffering for SDR applications as well as independent SpaceWire interfaces. The RTAX2000 manages scrub and configuration of each Xilinx.

Yamamoto, Clifford K↗

Analysis of memory use for improved design and compile-time allocation of local memory

Trace analysis techniques are used to study memory referencing behavior for the purpose of designing local memories and determining how to allocate them for data and instructions. In an attempt to assess the inherent behavior of the source code, the trace analysis system described here reduced the effects of the compiler and host architecture on the trace by using a technical called flattening. The variables in the trace, their associated single-assignment values, and references are histogrammed on the basis of various parameters describing memory referencing behavior. Bounds are developed specifying the amount of memory space required to store all live values in a particular histogram class. The reduction achieved in main memory traffic by allocating local memory is specified for each class.

Mcniven, Geoffrey D.↗

Symmetry-protected self-correcting quantum memory in three space dimensions

Whether self-correcting quantum memories can exist at nonzero temperature in a physically reasonable setting remains a great open problem. Furthermore, it has recently been argued that symmetry-protected topological (SPT) systems in three space dimensions subject to a strong constraint—that the quantum dynamics respect a 1-form symmetry—realize such a quantum memory. We illustrate how this works in Walker-Wang codes, which provide a specific realization of these desiderata. In this setting we show that it is sufficient for the 1-form symmetry to be enforced on a subvolume of the system. This strongly suggests that the SPT character of the state is not essential. We confirm this by constructing an explicit example with a trivial (paramagnetic) bulk that realizes a self-correcting quantum memory. We therefore show that the enforcement of a 1-form symmetry on a measure-zero subvolume of a three-dimensional system can be sufficient to stabilize a self-correcting quantum memory at nonzero temperature.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Autonomous image data reduction by analysis and interpretation

Image data is a critical component of the scientific information acquired by space missions. Compression of image data is required due to the limited bandwidth of the data transmission channel and limited memory space on the acquisition vehicle. This need becomes more pressing when dealing with multispectral data where each pixel may comprise 300 or more bytes. An autonomous, real time, on-board image analysis system for an exploratory vehicle such as a Mars Rover is developed. The completed system will be capable of interpreting image data to produce reduced representations of the image, and of making decisions regarding the importance of data based on current scientific goals. Data from multiple sources, including stereo images, color images, and multispectral data, are fused into single image representations. Analysis techniques emphasize artificial neural networks. Clusters are described by their outlines and class values. These analysis and compression techniques are coupled with decision making capacity for determining importance of each image region. Areas determined to be noise or uninteresting can be discarded in favor of more important areas. Thus limited resources for data storage and transmission are allocated to the most significant images.

Eberlein, Susan↗

Autonomous image data reduction by analysis and interpretation

Image data is a critical component of the scientific information acquired by space missions. Compression of image data is required due to the limited bandwidth of the data transmission channel and limited memory space on the acquisition vehicle. This need becomes more pressing when dealing with multispectral data where each pixel may comprise 300 or more bytes. An autonomous, real time, on-board image analysis system for an exploratory vehicle such as a Mars Rover is developed. The completed system will be capable of interpreting image data to produce reduced representations of the image, and of making decisions regarding the importance of data based on current scientific goals. Data from multiple sources, including stereo images, color images, and multispectral data, are fused into single image representations. Analysis techniques emphasize artificial neural networks. Clusters are described by their outlines and class values. These analysis and compression techniques are coupled with decision-making capacity for determining importance of each image region. Areas determined to be noise or uninteresting can be discarded in favor of more important areas. Thus limited resources for data storage and transmission are allocated to the most significant images.

Eberlein, Susan↗

Nonvolatile Memory Technology for Space Applications

This slide presentation reviews several forms of nonvolatile memory for use in space applications. The intent is to: (1) Determine inherent radiation tolerance and sensitivities, (2) Identify challenges for future radiation hardening efforts, (3) Investigate new failure modes and effects, and technology modeling programs. Testing includes total dose, single event (proton, laser, heavy ion), and proton damage (where appropriate). Test vehicles are expected to be a variety of non-volatile memory devices as available including Flash (NAND and NOR), Charge Trap, Nanocrystal Flash, Magnetic Memory (MRAM), Phase Change--Chalcogenide, (CRAM), Ferroelectric (FRAM), CNT, and Resistive RAM.

Oldham, Timothy R.↗

Applications of Fuzzy Set Theory to Satellite Soundings

The introduction of an appropriate fuzzy setting for satellite soundings and its application to clustering methods via unimodal fuzzy sets in the future is proposed. Methods of hard clustering analysis and fuzzy partitioned clustering were applied on simulated data with very encouraging results. The proposed clustering technique is discussed. The notion of a unimodal fuzzy set was chosen to represent the partition of a data set for two reasons: (1) it detects all the locations in the vector space where highly concentrated clusters of points exist; and (2) the notion is general enough to represent clusters that exhibit quite general distributions of points. The technique detects all of the existing unimodal fuzzy sets and realizes the maximum separation among them. It is economical in memory space and computational time requirements and also detects groups that are fairly generally distributed in the feature space.

Munteanu, M. J.↗

First- and Second-Order Sensitivity Analysis of a P-Version Finite Element Equation Via Automatic Differentiation

Sensitivity analysis is a technique for determining derivatives of system responses with respect to design parameters. Among many methods available for sensitivity analysis, automatic differentiation has been proven through many applications in fluid dynamics and structural mechanics to be an accurate and easy method for obtaining derivatives. Nevertheless, the method can be computational expensive and can require a high memory space. This project will apply an automatic differentiation tool, ADIFOR, to a p-version finite element code to obtain first- and second- order then-nal derivatives, respectively. The focus of the study is on the implementation process and the performance of the ADIFOR-enhanced codes for sensitivity analysis in terms of memory requirement, computational efficiency, and accuracy.

Hou, Gene↗

The role of time and speed in NASA's SUNLITE program

The SUNLITE program of NASA's LaRC aims to demonstrate lower noise and better frequency stability for continuous-wave (CW) solid-state lasers in the microgravity environment of space. The program will utilize laser-diode-pumped nonplanar-ring oscillators regulated by ultra-stable high-finesse Fabry-Perot Spectrometers to produce light beams with phase rate or frequency variations as low as 3 Hz. SUNLITE will use the period-method (P-method) to measure the phase rate and frequency stability of the lasers. The P-method was chosen because it requires less memory space for the raw data, because frequencies can be analyzed on-line in real-time simply by reciprocating the periods (fi = 1/pi), and because the mean and variance of the frequencies can be calculated as fast or faster than they can be with the fastest fast Fourier transformations. Furthermore, for a given signal-to-noise power ratio, the P-method requires less data and less computer time to extract the noise components. Although the P-method does require fast Time Interval Counters, the Fourier transformation method requires comparably fast Sampling Volt meters. For either method, however, time and computer speed play a critical role.

Hafele, Joseph C.↗