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At least 163 records · Page 9

A neutralizing antibody target in early HIV-1 infection was recapitulated in rhesus macaques immunized with the transmitted/founder envelope sequence

Transmitted/founder (T/F) HIV-1 envelope proteins (Envs) from infected individuals that developed neutralization breadth are likely to possess inherent features desirable for vaccine immunogen design. To explore this premise, we conducted an immunization study in rhesus macaques (RM) using T/F Env sequences from two human subjects, one of whom developed potent and broad neutralizing antibodies (Z1800M) while the other developed little to no neutralizing antibody responses (R66M) during HIV-1 infection. Using a DNA/MVA/protein immunization protocol, 10 RM were immunized with each T/F Env. Within each T/F Env group, the protein boosts were administered as either monomeric gp120 or stabilized trimeric gp140 protein. All vaccination regimens elicited high titers of antigen-specific IgG, and two animals that received monomeric Z1800M Env gp120 developed autologous neutralizing activity. Using early Env escape variants isolated from subject Z1800M as guides, the serum neutralizing activity of the two immunized RM was found to be dependent on the gp120 V5 region. Interestingly, the exact same residues of V5 were also targeted by a neutralizing monoclonal antibody (nmAb) isolated from the subject Z1800M early in infection. Glycan profiling and computational modeling of the Z1800M Env gp120 immunogen provided further evidence that the V5 loop is exposed in this T/F Env and was a dominant feature that drove neutralizing antibody targeting during infection and immunization. An expanded B cell clonotype was isolated from one of the neutralization-positive RM and nmAbs corresponding to this group demonstrated V5-dependent neutralization similar to both the RM serum and the human Z1800M nmAb. The results demonstrate that neutralizing antibody responses elicited by the Z1800M T/F Env in RM converged with those in the HIV-1 infected human subject, illustrating the potential of using immunogens based on this or other T/F Envs with well-defined immunogenicity as a starting point to drive breadth.

59 BASIC BIOLOGICAL SCIENCES↗

Immunization of cows with HIV envelope trimers generates broadly neutralizing antibodies to the V2-apex from the ultralong CDRH3 repertoire

The generation of broadly neutralizing antibodies (bnAbs) to conserved epitopes on HIV Envelope (Env) is one of the cornerstones of HIV vaccine research. The animal models commonly used for HIV do not reliably produce a potent broadly neutralizing serum antibody response, with the exception of cows. Cows have previously produced a CD4 binding site response by homologous prime and boosting with a native-like Env trimer. In small animal models, other engineered immunogens were shown to focus antibody responses to the bnAb V2-apex region of Env. Here, we immunized two groups of cows (n = 4) with two regimens of V2-apex focusing Env immunogens to investigate whether antibody responses could be generated to the V2-apex on Env. Group 1 was immunized with chimpanzee simian immunodeficiency virus (SIV)-Env trimer that shares its V2-apex with HIV, followed by immunization with C108, a V2-apex focusing immunogen, and finally boosted with a cross-clade native-like trimer cocktail. Group 2 was immunized with HIV C108 Env trimer followed by the same HIV trimer cocktail as Group 1. Longitudinal serum analysis showed that one cow in each group developed serum neutralizing antibody responses to the V2-apex. Eight and 11 bnAbs were isolated from Group 1 and Group 2 cows, respectively, and showed moderate breadth and potency. Potent and broad responses in this study developed much later than previous cow immunizations that elicited CD4bs bnAbs responses and required several different immunogens. All isolated bnAbs were derived from the ultralong CDRH3 repertoire. The finding that cow antibodies can target more than one broadly neutralizing epitope on the HIV surface reveals the generality of elongated structures for the recognition of highly glycosylated proteins. The exclusive isolation of ultralong CDRH3 bnAbs, despite only comprising a small percent of the cow repertoire, suggests these antibodies outcompete the long and short CDRH3 antibodies during the bnAb response.

Microbiology↗

A Big Problem for Small Earthquakes: Benchmarking Routine Magnitudes and Conversion Relationships with Coda Envelope-Derived Mw in Southern Kansas and Northern Oklahoma

Earthquake magnitudes are widely relied upon measures of earthquake size. Although moment magnitude (M w ) has become the established standard for moderate and large earthquakes, difficulty in reliably measuring seismic moments for small (generally M w <4) earthquakes has meant that magnitudes for these events remain plagued by a patchwork of inconsistent measurement scales. Because of this, magnitudes of small earthquakes and statistics derived from them can be biased. Furthermore, because small earthquakes are much more numerous than large ones, many applications, such as seismic hazard modeling, depend critically on analysis of events characterized by magnitudes other than M w . Therefore, to assess this problem, we apply coda envelope analysis to reliably determine moment magnitudes for a case study of small earthquakes from northern Oklahoma and southern Kansas. Not surprisingly, we find significant differences among M L , m bLg , and M w for M ~2–4 earthquakes examined here. More troublingly, we find that relations designed to convert other magnitudes to M w , which are relied upon for important applications such as seismic hazard analysis, often increase rather than decrease this bias for our dataset. In our case study, we find that converted magnitudes can result in a systematic bias sometimes exceeding 0.5 magnitude units, a difference that typically corresponds to a factor of ~3 in seismicity rate. Moreover, we find a correspondingly large bias in Gutenberg–Richter b-values, controlled primarily by inaccurate magnitude scaling in the conversion relationships. Although this study focuses on a relatively small geographic area, we can expect that similar issues exist with varying severity in other regions. Therefore, magnitudes of small earthquakes and their associated statistics, including seismicity rates and b-values, should be treated with caution.

58 GEOSCIENCES↗

Aerosol Envelope Sealing of New Residences

This project investigated the use of an aerosol-based sealing method to reduce air leakage of new homes in the United States. The process involves pressurizing the building while dispersing an aerosol sealant “fog” to the building interior. As air escapes the building through leaks in the envelope, the sealant particles are carried to the leaks where they make contact and stick, sealing the leaks. A standard blower door is used to facilitate the sealing process and to provide real-time feedback and a permanent record of the sealing. The technology is thus capable of simultaneously measuring, locating, and sealing leaks in a building automatically.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Aerosol Envelope Sealing of New Residences

This project investigated the use of an aerosol-based sealing method to reduce air leakage of new homes in the United States. The process involves pressurizing the building while dispersing an aerosol sealant “fog” to the building interior. As air escapes the building through leaks in the envelope, the sealant particles are carried to the leaks where they make contact and stick, sealing the leaks. A standard blower door is used to facilitate the sealing process and to provide real-time feedback and a permanent record of the sealing. The technology is thus capable of simultaneously measuring, locating, and sealing leaks in a building automatically.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Beam Envelope Variation due to Space-Charge Neutralization

Our non-invasive, time-resolved diamagnetic loop measurements of beam size during the electron current-pulse flattop at the exit of our 20-MeV linear induction accelerator revealed that the beam size varied by about 13% during the current flattop. This was an unexpected result, since both current and energy were constant during the interval of radius variation. One possible cause, poor vacuum, was investigated using a time resolved envelope equation. It was found that sufficiently high residual-gas pressure in the downstream transport region could result in the observed variation.

43 PARTICLE ACCELERATORS↗

Clean Energy Employment Impacts and Occupational Analyses: Building Envelope & Electrification Upgrades

Under the Communities LEAP (Local Energy Action Program) Pilot, the U.S. Department of Energy (DOE) is working with a group of LEAP communities to bolster workforce development initiatives and support the growth of local employment in the clean energy economy. Through this resource, DOE seeks to provide participating communities with an overview of the types of occupations that could be affected by investments in building envelope and building electrification upgrades in existing building stock - differentiating between the residential and commercial sectors. This occupational analysis is intended to be used by communities to inform workforce initiatives (e.g., local training and education programs) as they implement building energy efficiency and electrification projects at scale.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Integrated Off-Gas System Tests on the DM1200 Melter with RPP-WTP LAW Sub-Envelope Bl Simulants, VSL-03R3851-1, Rev. 0 (Oct 2003)

The report documents melter and off-gas performance results obtained on the DM1200 melter during processing of LAW Sub-Envelope B1 feed. The principal objectives of the DM1200 melter testing were to demonstrate suitable processing and production rates for LAW B1 feed; characterize the glass product for elemental composition; measure elemental emission rates and decontamination factors (DFs) across the melter and off-gas treatment components; and provide additional data on the performance of the thermal catalytic oxidation and selective catalytic reduction (TCO/SCR) unit efficiency in treating organic emissions. The feed was spiked with organic compounds for part of the testing duration. All data were collected for use in engineering and system design purposes. No sampling and analysis to collect environmental data was performed during these tests.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

DuraMelter 100 Sub-Envelope Changeover Testing Using LAW SubEnvelopes A1 and C1 Feeds in Support of the LAW Pilot Melter (Final Report)

The primary goal of the testing described in this report was to develop and recommend a compliant HLW glass formulation to support the actual waste testing of AZ-101 Envelope D waste (blended with actual pretreatment products including Cs- and Tc-eluates from pretreatment of AP-101 and AZ-101 LAW). Testing of actual waste will be performed at Battelle, Pacific Northwest Division. The test objective was met by the development and recommendation of the glass formulation HLW98-95; the formulation has been transmitted to the WTP to support vitrification of HLW AZ-101 actual waste.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Integrated Off-Gas System Tests on the DM1200 Melter with RPP-WTP LAW Sub-Envelope C1 Simulants (Final Report)

The report documents melter and off-gas performance results obtained on the DM1200 during processing of LAW Sub-Envelope Cl feed. The principal objectives of the DM1200 melter testing were to demonstrate suitable processing and production rates for LAW Cl feed; characterize the glass product for elemental composition, the presence of organic compounds, and TCLP response for metals; and measure destruction and removal efficiencies (DREs) for organic compounds across the melter and off-gas treatment components. The feed was spiked with organic compounds for part of the testing duration. Data were collected for both process engineering needs and to support regulatory activities. The data needed for regulatory support were collected using EPA methods and independent data analyses and data checking were performed.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Integration of thermally anisotropic building envelopes with TES and advanced controls to tailor HVAC loads

Heating, ventilation, and air conditioning (HVAC) systems are the primary energy consumers in buildings to meet heating or cooling energy demands. The building envelope can play an active role in reducing this demand and associated costs by collecting thermal energy naturally available, such as diurnal temperature swings, solar irradiance, and night sky radiation cooling, to offset heating and cooling loads.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Poisson Equation for a (General) Homogeneous d-Dimensional Ellipsoid with Applications to Beam Envelope Tracking

This note describes the solution of the free-space Poisson equation in the interior of a $d$-dimensional homogeneous ellipsoid, and the associated space charge fields. An explicit formula (\ref{Sformula}) is provided that relates the $d\times d$ matrix describing the space charge (quadratic) potential to the $d\times d$ covariance matrix of the ellipsoid. For the cases $d=2$ and $d=3$, this result is used to determine the linear map corresponding to a space charge kick, that may be used to push the beam $6\times 6$ covariance matrix during envelope tracking. The treatment of upright ellipsoids for $d=2$ and $d=3$ is well-represented in the literature. However, the approach taken here emphasizes a general ellipsoid with arbitrary correlations in any dimension. The Appendix provides a general solution of the free-space Poisson equation in dimension $d$ for a source distribution with ellipsoidal symmetry.

97 MATHEMATICS AND COMPUTING↗

Component pose reconstruction using a single robotic total station for panelized building envelopes

The construction industry can benefit greatly from increased automation in construction processes in terms of precision, time, and labor costs. This is especially true for prefabricated construction for either new buildings or envelope retrofits. Here, prefabricated components are manufactured offsite according to design specifications and installed onsite. Accurate information on the component’s position and orientation (pose) is needed to achieve this. A tool named “Real-Time Evaluator” (RTE), designed to autonomously track prefabricated components as they are being installed and provide real-time installation instructions, is currently under development using a single robotic total station. This is challenging since at least three points are needed to determine the pose of an object in space. To achieve this goal with a single robotic total station, two key algorithms were developed: the “resection” algorithm aligns the digital twin with the physical twin regardless of the location of the total station, and the “transformation” algorithm gives instructions of translations and rotations to installers to achieve the desired installation pose. The algorithms were evaluated experimentally on a lab-scale demonstration. Results show that the resection algorithm achieved an average error of < 3.1 mm, while the transformation algorithm predicted the rotation angle along a single axis with an error of < 0.5◦.

Tang, Mengjia↗

Electron transport across the cell envelope via multiheme c -type cytochromes in Geobacter sulfurreducens

Extracellular electron transfer (EET) enables certain microorganisms to respire using soluble and insoluble extracellular electron acceptors by transporting electrons across the cell envelope. Among these, G. sulfurreducens serves as a model organism for understanding direct EET pathways, where multiheme c-type cytochromes mediate electron transport from intracellular redox carriers to extracellular acceptors such as Fe(III) oxides and electrodes. This review focuses on heme-dependent electron transfer in Geobacter sulfurreducens, detailing the roles of inner membrane cytochromes, periplasmic carriers, outer membrane conduits, and recently characterized extracellular nanowires formed by polymerized multiheme c-type cytochromes, including OmcS, OmcE, and OmcZ. We examine the state of understanding of their physiological function, their structural features, expression patterns, and essentiality under various respiratory conditions. These insights advance our understanding of microbial anaerobic respiration and have implications for biogeochemical cycling, bioenergy generation, and bioremediation. The molecular architecture, assembly mechanisms, and secretion pathways of multiheme c-type cytochrome nanowires remain active areas of investigation, offering promising directions for future research and biotechnological innovation in engineered microbial systems.

Chemistry↗

Does Carrier Envelope Phase Affect the Ionization Site in a Neutral Diatomic Molecule?

A recent work shows how to extract the ionization site of a neutral diatomic molecule by comparing Quantum Trajectory Monte Carlo (QTMC) simulations with experimental measurements of the final electron momenta distribution. This method was applied to an experiment using a 40-femtosecond infrared pulse, finding that a downfield atom is roughly twice as likely to be ionized as an upfield atom in a neutral nitrogen molecule. However, an open question remains as to whether an assumption of the zero carrier envelope phase (CEP) used in the above work is still valid for short, few-cycle pulses where the CEP can play a large role. Given experimentalists’ limited control over the CEP and its dramatic effect on electron momenta after ionization, it is desirable to see what influence the CEP may have in determining the ionization site. In this paper, we employ QTMC techniques to simulate strong-field ionization and electron propagation from neutral N2 using an intense 6-cycle laser pulse with various CEP values. Comparing simulated electron momenta to experimental data indicates that the ratio of down-to-upfield ions remains roughly 2:1 regardless of the CEP. This confirms that the ionization site of a neutral molecule is determined predominantly by the laser frequency and intensity, as well as the ground-state molecular wavefunction, and is largely independent of the CEP.

Schimmoller, Alex↗

Importance of Window Installation in Residential Building Envelopes Having Continuous External Insulation in Order to Realize Energy Efficiency

Residential buildings are one of the prime candidates in the United States for reducing energy consumption. Continuous exterior insulation (CEI) is being used increasingly often in residential buildings to improve energy efficiency. Windows constitute 15–40% of a building envelope and are the weakest component in energy performance. The installation of windows in walls with CEI has not been well evaluated. We identified four cases of installing windows in walls with CEI of 25–76 mm (1–3 in.) thickness and analyzed the energy loss between the window and wall interface (flanking loss), structural issues, air leakage, and moisture penetration. Thermal analysis showed that the insulation value (RSI) of the 305 mm (12 in.) perimeter wall surrounding a window decreased by 7.6–34.5% in the four cases when compared with the RSI of the wall without the window. A window installation method is proposed to address the issues likely to occur with installation methods currently being used in the field. An out-of-the-box installation system was also designed to achieve a better thermal performance, cost effectiveness, and structural performance in high-performance residential buildings.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗