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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 1,369 records · Page 76
All sourcesNASA NTRSDOE OSTI
DOE OSTI2019

A Pattern Based Algorithmic Autotuner for Graph Processing on GPUs

This paper presents Gswitch, a pattern-based algorithmic autotuning system that dynamically switches to the suitable optimization variants with negligible overhead. Its novelty is a small set of algorithmic patterns that enables configurable assembling of algorithm variants. The fast transition of Gswitch is based on a machine learning model trained from 644 real graphs from the network repository. In addition, Gswitch provides succinct programming interface which hides all low-level tuning details. We evaluate Gswitch for typical graph algorithms (BFS, CC, PR, SSSP, and BC) on Nvidia Kepler and Pascal GPUs. The results show that Gswitch runs up to 10× faster than the best configuration of the state-of-the-art programmable GPU-based graph processing libraries on ten representative graphs. Gswitch wins on 92.4% cases of 644 graph data which is the largest dataset evaluation reported to date.

HPC, graph algorithms, GPUs, auto tuning↗
DOE OSTI2019

Towards Class-Balancing Human Comfort Datasets with GANs

Human comfort datasets are widely used in smart buildings. From thermal comfort prediction to personalized indoor environments, labelled subjective responses from participants in an experiment are required to feed different machine learning models. However, many of these datasets are small in samples per participants, number of participants, or suffer from a class-imbalance of its subjective responses. In this paper we explore the use of Generative Adversarial Networks to generate synthetic samples to be used in combination with real ones for data-driven applications in the built environment.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2020

How Do Visual Explanations Foster End Users' Appropriate Trust in Machine Learning?

We investigated the effects of different visual explanations on users' trust in machine learning classification. We proposed three forms of visual explanations of a classification based on identifying relevant training instances. We conducted a user study to evaluate these visual explanations as well as a no explanation condition. We measured users' trust of a classifier, quantified the effects of these three forms of explanations, and assessed the changes in users' trust. We found that participants trust a classifier appropriately when an explanation is available. The combination of human, classification algorithm and understandable explanation makes better decisions than the classifier and human alone.This work advances the state-of-the-art closer to building trust-able machine learning models and informs the design and appropriate use of automated systems.

Yang, Fumeng↗
DOE OSTI2020

Characterization and identification of HPC applications at leadership computing facility

High Performance Computing (HPC) is an important method for scientific discovery via large-scale simulation, data analysis, or artificial intelligence. Leadership-class supercomputers are expensive, but essential to run large HPC applications. The Petascale era of supercomputers began in 2008, with the first machines achieving performance in excess of one petaflops, and with the advent of new supercomputers in 2021 (e.g., Aurora, Frontier), the Exascale era will soon begin. However, the high theoretical computing capability (i.e., peak FLOPS) of a machine is not the only meaningful target when designing a supercomputer, as the resources demand of applications varies. A deep understanding of the characterization of applications that run on a leadership supercomputer is one of the most important ways for planning its design, development and operation. In order to improve our understanding of HPC applications, user demands and resource usage characteristics, we perform correlative analysis of various logs for different subsystems of a leadership supercomputer. This analysis reveals surprising, sometimes counter-intuitive patterns, which, in some cases, conflicts with existing assumptions, and have important implications for future system designs as well as supercomputer operations. For example, our analysis shows that while the applications spend significant time on MPI, most applications spend very little time on file I/O. Combined analysis of hardware event logs and task failure logs show that the probability of a hardware FATAL event causing task failure is low. Combined analysis of control system logs and file I/O logs reveals that pure POSIX I/O is used more widely than higher level parallel I/O. Based on holistic insights of the application gained through combined and co-analysis of multiple logs from different perspectives and general intuition, we engineer features to "fingerprint" HPC applications. We use t-SNE (a machine learning technique for dimensionality reduction) to validate the explainability of our features and finally train machine learning models to identify HPC applications or group those with similar characteristic. To the best of our knowledge, this is the first work that combines logs on file I/O, computing, and inter-node communication for insightful analysis of HPC applications in production.

Liu, Zhengchun↗
DOE OSTI2020

Toward Large-Scale Image Segmentation on Summit

Semantic segmentation of images is an important computer vision task that emerges in a variety of application domains such as medical imaging, robotic vision and autonomous vehicles to name a few. While these domain-specific image analysis tasks involve relatively small image sizes (~ 10 2 × 10 2 ), there are many applications that need to train machine learning models on image data with extents that are orders of magnitude larger (~10 4 × 10 4 ). Training deep neural network (DNN) models on large extent images is extremely memory-intensive and often exceeds the memory limitations of a single graphical processing unit, a hardware accelerator of choice for computer vision workloads. Here, an efficient, sample parallel approach to train U-Net models on large extent image data sets is presented. Its advantages and limitations are analyzed and near-linear strong-scaling speedup demonstrated on 256 nodes (1536 GPUs) of the Summit supercomputer. Using a single node of the Summit supercomputer, an early evaluation of a recently released model parallel framework called GPipe is demonstrated to deliver ~ 2X speedup in executing a U-Net model with an order of magnitude larger number of trainable parameters than reported before. Performance bottlenecks for pipelined training of U-Net models are identified and mitigation strategies to improve the speedups are discussed. Together, these results open up the possibility of combining both approaches into a unified scalable pipelined and data parallel algorithm to efficiently train U-Net models with very large receptive fields on data sets of ultra-large extent images.

Seal, Sudip↗
DOE OSTI2022

Data-Driven Prediction and Optimization of Energy Use for Transit Fleets of Electric and ICE Vehicles

Due to the high upfront cost of electric vehicles, many public transit agencies can afford only mixed fleets of internal combustion and electric vehicles. Optimizing the operation of such mixed fleets is challenging because it requires accurate trip-level predictions of electricity and fuel use as well as efficient algorithms for assigning vehicles to transit routes. We present a novel framework for the data-driven prediction of trip-level energy use for mixed-vehicle transit fleets and for the optimization of vehicle assignments, which we evaluate using data collected from the bus fleet of CARTA, the public transit agency of Chattanooga, TN. We first introduce a data collection, storage, and processing framework for system-level and high-frequency vehicle-level transit data, including domain-specific data cleansing methods. We train and evaluate machine learning models for energy prediction, demonstrating that deep neural networks attain the highest accuracy. Based on these predictions, we formulate the problem of minimizing energy use through assigning vehicles to fixed-route transit trips. We propose an optimal integer program as well as efficient heuristic and meta-heuristic algorithms, demonstrating the scalability and performance of these algorithms numerically using the transit network of CARTA.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗
DOE OSTI2021

Improve Learning from Crowds via Generative Augmentation

Crowdsourcing provides an efficient label collection schema for supervised machine learning. However, to control annotation cost, each instance in the crowdsourced data is typically annotated by a small number of annotators. This creates a sparsity issue and limits the quality of machine learning models trained on such data. In this paper, we study how to handle sparsity in crowdsourced data using data augmentation. Specifically, we propose to directly learn a classifier by augmenting the raw sparse annotations. We implement two principles of high-quality augmentation using Generative Adversarial Networks: 1) the generated annotations should follow the distribution of authentic ones, which is measured by a discriminator; 2) the generated annotations should have high mutual information with the ground-truth labels, which is measured by an auxiliary network. Extensive experiments and comparisons against an array of state-of-the-art learning from crowds methods on three real-world datasets proved the effectiveness of our data augmentation framework. It shows the potential of our algorithm for low-budget crowdsourcing in general.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗
DOE OSTI2023

Entropy-driven Optimal Sub-sampling of Fluid Dynamics for Developing Machine-learned Surrogates

Optimal sub-sampling of large datasets from fluid dynamics simulations is essential for training reduced-order machine learned models. A method using Shannon entropy was developed to weight flow features according to their level of information content, such that the most informative features can be extracted and used for training a surrogate model. The method is demonstrated in the canonical flow over a cylinder problem simulated with OpenFOAM. Both time-independent predictions and temporal forecasting were investigated as well as two types of prediction targets: local per-grid-point predictions and global per-time-step predictions. When tested on training a surrogate model, results indicate that our entropy-based sampling method typically outperforms random sampling and yields more reproducible results in less iterations. Finally, the method was used to train a surrogate model for modeling turbulence in magnetohydrodynamic flows, which revealed various challenges and opportunities for future research.

Brewer, Wes↗
DOE OSTI2024

Emerging Technologies for Privacy Preservation in Energy Systems

This study explores the intersection of digitalization and privacy within the energy sector, focusing on the emerging challenges and opportunities presented by integrating Distributed Energy Resources (DERs) and advanced metering infrastructure. The need for robust digital privacy measures has become crucial as the energy industry evolves towards a more decentralized, digitalized, and decarbonized future. This study delves into four cutting-edge privacy-preserving technologies—Homomorphic Encryption (HE), Secure Multiparty Computation (SMPC), Differential Privacy (DP), and Federated Learning (FL)—each offering unique solutions to safeguard consumer data by increasing digital connectivity and data exchange. Through a detailed examination of these methods, the study explains how each technology operates, its applications within the energy sector, and the specific privacy challenges it addresses. Homomorphic Encryption allows for secure computations on encrypted data, enabling data analysis without compromising privacy. Secure Multiparty Computation enables collaborative data analysis across different entities while protecting the confidentiality of the inputs. Differential Privacy introduces randomness into the assembled data set, preventing the identification of individual records in statistical databases. Lastly, Federated Learning offers a paradigm shift in data analysis, where machine learning models are trained at the edge, minimizing the centralization of sensitive data. The research underscores the significance of implementing these privacy-enhancing technologies to comply with strict data protection regulations, foster consumer trust, and enhance the security of the energy infrastructure. By providing a comprehensive overview of these methodologies and their practical implications for the energy sector, this study aims to contribute to the ongoing discourse on digital privacy, offering insights into how the energy industry can navigate the complexities of data privacy in the digital age.

Cali, Umit↗
DOE OSTI2019

ML4Chem: Machine Learning for Chemistry and Materials v0.0.1

ML4Chem is a free, and open-source machine learning package for chemistry and materials sciences written in Python. It allows scientists to focus on applying the most commonly used machine learning models in chemistry and materials sciences with minimum effort.

de Jong, Wibe↗
DOE OSTI2018

DeepAnnotator

Given a collection of pairs ((A) written material such as reports, phrases, bulleted lists, etc., (B) structured labels called annotations) called the training data, we want to create software to take future written material (A) and correctly predict (B). In this case we have used medical reports and medical coder's structured labels as our training data. The software builds a machine learning model of type deep learning, specifically a convolutional neural network (CNN) using the training data so that when new data arrives in the future the annotations can be predicted.

Christian, JamesB.↗
DOE OSTI2017

Tensor Basis Neural Network v. 1.0 (beta)

This software package can be used to build, train, and test a neural network machine learning model. The neural network architecture is specifically designed to embed tensor invariance properties by enforcing that the model predictions sit on an invariant tensor basis. This neural network architecture can be used in developing constitutive models for applications such as turbulence modeling, materials science, and electromagnetism.

Ling, Julia↗
DOE OSTI2020

DNA Sequencing Optimizer v0.1

This is a software utility used to maximize next-generation sequencing data output without compromising quality values. The DNA Sequencing Optimizer is used to determine the optimal amount of library to load. To do this a supervised machine learning model predicts cluster density, a measure of how much DNA is bound to the sequence, from the concentration of DNA loaded. The output is a plot that is used by experimentalists to determine the best DNA library concentration to load onto the sequencer.

Costello, Zachary↗
DOE OSTI2021

Deep-Lynx-ML-Adapter

The Deep Lynx Machine Learning (ML) Adapter is a generic adapter that programmatically runs the ML as continuous data is received. Then, Jupyter Notebooks can be customized according to the project for pre-processing the data, building the machine learning models, prediction analysis of incoming data using an existing model, and forecasting anomalies / failures of the physical asset.

Wilsdon, KatherineN↗
DOE OSTI2021

MACAW v1.0

The ability to embed molecules in a numeric space is essential in order to build mathematical and machine-learning models describing molecular properties or other processes affected by molecules. MACAW is a cheminformatic tool that allows embedding small molecules into a multidimensional numeric space. In the embedding, each molecule is assigned a numeric vector that captures information of the molecule in relation to other molecules, and that vector can be used as input to mathematical models. Molecules that are more similar to each other are embedded closer in this numeric space, whereas molecules that are more different are embedded further away. One advantage of the MACAW embedding technology compared to established alterantives is that it is fast and does not require extensive computational resources or expertise. In particular, MACAW embeddings can be used as input to mathematical models without the need for variable cleaning or feature selection, saving time and simplifying their use. On the other hand, MACAW also contains methods to generate new molecules and to recommend new molecules satisfying a desired molecular property. The generation of new molecules can be biased based on an input set of molecules, effectively generating molecular diversity around it. In its turn, MACAW's molecular recommendation tool is a novel method for evolving molecules in silico towards a desired molecular specification. In this method, the biased molecular generator tool is applied iteratively in combination with a molecular selection step. As a result, in each iteration the molecules selected by the software are increasingly closer to the desired specification. Both the molecular generation and the molecular recommendation tools are very fast, efficient, and intuitive to use.

Roger, VincentBlay↗
DOE OSTI2022

Scramble

The purpose of Scramble is to provide a cross validation method to ensure machine learning model accuracy in cases where model classes have heterogeneous N values.

Elliott, ShilohN↗
DOE OSTI2022

components for the MuMMI software release

The Department of Energy and the National Cancer Institute have developed new software for conducting multi-scale simulations of complex systems. This software, called the Multiscale Machine-Learned Modeling Infrastructure (MuMMI), couples simulations on three spatial scales to study slow, large-scale reorganizations of biomolecular systems with the speed of continuum and coarse-grained models while revealing selected interactions at full atomic precision. In these simulations, coarse-to-fine model conversions are used to spawn relevant fine-scale simulations along chosen order parameters, and fine-to-coarse feedback is used to iteratively improve the accuracy and multi-scale consistency of coarse-scale and continuum simulations. The complete MuMMI framework will be reviewed and released as open-source software by Lawrence Livermore National Laboratory. This review covers a subset of the MuMMI components that were developed exclusively at the Los Alamos National Laboratory.

Neale, Christopher↗