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At least 829 records · Page 46

Topology, landscapes, and biomolecular energy transport

While ubiquitous, energy redistribution remains a poorly understood facet of the nonequilibrium thermodynamics of biomolecules. At the molecular level, finite-size effects, pronounced nonlinearities, and ballistic processes produce behavior that diverges from the macroscale. Here, we show that transient thermal transport reflects macromolecular energy landscape architecture through the topological characteristics of molecular contacts and the nonlinear processes that mediate dynamics. While the former determines transport pathways via pairwise interactions, the latter reflects frustration within the landscape for local conformational rearrangements. Unlike transport through small-molecule systems, such as alkanes, nonlinearity dominates over coherent processes at even quite short time- and length-scales. Our exhaustive all-atom simulations and novel local-in-time and space analysis, applicable to both theory and experiment, permit dissection of energy migration in biomolecules. The approach demonstrates that vibrational energy transport can probe otherwise inaccessible aspects of macromolecular dynamics and interactions that underly biological function.

59 BASIC BIOLOGICAL SCIENCES↗

FCAP - A new tool for the evaluation of active control technology

A computer program has been developed for the evaluation of flight control systems designed for flexible aircraft. This Flight Control Analysis Program (FCAP) is designed in a modular fashion to incorporate sensor, actuator, and control logic element dynamics as well as aircraft dynamics and aerodynamics for complex configurations. Formulation of the total aircraft dynamic system is accomplished in matrix form by casting the equations in state vector format. The system stability and performance are determined in either the frequency or time domain using classical analysis techniques. The aerodynamic method used also permits evaluation of the flutter characteristics of the aircraft.

Noll, R. B.↗

Polaron-induced phonon localization and stiffening in rutile $\mathrm{TiO_2}$

Small polaron formation in transition metal oxides, like the prototypical material rutile $\mathrm{TiO_2}$, remains a puzzle and a challenge to simple theoretical treatment. In our combined experimental and theoretical study, we examine this problem using Raman spectroscopy of photoexcited samples and real-time time-dependent density functional theory (RT-TDDFT), which employs Ehrenfest dynamics to couple the electronic and ionic subsystems. We observe experimentally the unexpected stiffening of the $A_{1g}$ phonon mode under UV illumination and provide a theoretical explanation for this effect. Our analysis also reveals a possible reason for the observed anomalous temperature dependence of the Hall mobility. Finally, small polaron formation in rutile $\mathrm{TiO_2}$ is a strongly nonadiabatic process and is adequately described by Ehrenfest dynamics at time scales of polaron formation.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Earth orientation from lunar laser ranging and an error analysis of polar motion services

Lunar laser ranging (LLR) data are obtained on the basis of the timing of laser pulses travelling from observatories on earth to retroreflectors placed on the moon's surface during the Apollo program. The modeling and analysis of the LLR data can provide valuable insights into earth's dynamics. The feasibility to model accurately the lunar orbit over the full 13-year observation span makes it possible to conduct relatively long-term studies of variations in the earth's rotation. A description is provided of general analysis techniques, and the calculation of universal time (UT1) from LLR is discussed. Attention is also given to a summary of intercomparisons with different techniques, polar motion results and intercomparisons, and a polar motion error analysis.

Dickey, J. O.↗

An Investigation into the Effects of Swirl on the Performance and Emissions of an Opposed-Piston Two-Stroke Engine using Large Eddy Simulations

Opposed-piston two-stroke (OP-2S) engines have the potential to achieve higher thermal efficiency than a conventional four-stroke diesel engine. However, the uniflow scavenging process is difficult to control over a wider range of speed and loads due to its sensitivity to pressure dynamics, port timings, and port design. Specifically, the angle of the intake ports can be used to generate swirl which has implications for open and closed cycle effects. This study proposes an analysis of the effects of port angle on the in-cylinder flow distribution and combustion performance of an OP-2S using computational fluid dynamics engine. Large Eddy Simulation (LES) was used to model turbulence given its ability to predict in-cylinder mixing and cyclic variability. A three-cylinder model was validated to experimental data collected by Achates Power and the grid was verified using an LES quality approach from the literature. The model was used to simulate port angles from 12 to 29 degrees at constant pressure and temperature boundary conditions. Results indicated that the higher bulk swirl ratio generated by larger port angles tends to trap more internal residuals. This effect on the scavenging performance, combined with the larger trapped swirl ratio, also has a significant impact on the combustion performance in a two-stroke engine. It was concluded that there exists a tradeoff of efficiency and emissions that must be considered when increasing the port angle in a uniflow two-stroke engine. 1. Introduction Two-stroke engines were developed in the 1800s and are commonly used in practice today for lightweight power applications such as motorcycles or handheld power tools, as well as large-bore low speed engines for stationary power and marine applications. Two-stroke engines provide the distinct advantage of higher torque/power output but present challenges due to its coupled intake and exhaust process. Four-stroke engines have the benefit of using two full piston strokes to induct intake charge and to expel exhaust gases. Controlling the trapped charge composition in a twostroke engine via a scavenging process is crucial for reliable and efficient engine operation.

33 ADVANCED PROPULSION SYSTEMS↗

The Retrospective Iterated Analysis Scheme for Nonlinear Chaotic Dynamics

Atmospheric data assimilation is the name scientists give to the techniques of blending atmospheric observations with atmospheric model results to obtain an accurate idea of what the atmosphere looks like at any given time. Because two pieces of information are used, observations and model results, the outcomes of data assimilation procedure should be better than what one would get by using one of these two pieces of information alone. There is a number of different mathematical techniques that fall under the data assimilation jargon. In theory most these techniques accomplish about the same thing. In practice, however, slight differences in the approaches amount to faster algorithms in some cases, more economical algorithms in other cases, and even give better overall results in yet some other cases because of practical uncertainties not accounted for by theory. Therefore, the key is to find the most adequate data assimilation procedure for the problem in hand. In our Data Assimilation group we have been doing extensive research to try and find just such data assimilation procedure. One promising possibility is what we call retrospective iterated analysis (RIA) scheme. This procedure has recently been implemented and studied in the context of a very large data assimilation system built to help predict and study weather and climate. Although the results from that study suggest that the RIA scheme produces quite reasonable results, a complete evaluation of the scheme is very difficult due to the complexity of that problem. The present work steps back a little bit and studies the behavior of the RIA scheme in the context of a small problem. The problem is small enough to allow full assessment of the quality of the RIA scheme, but it still has some of the complexity found in nature, namely, its chaotic-type behavior. We find that the RIA performs very well for this small but still complex problem which is a result that seconds the results of our early studies.

Todling, Ricardo↗

High-resolution infrared spectroscopy of jet cooled trans -deuteroxycarbonyl ( trans -DOCO) radical

The rovibrational spectrum of jet cooled trans-deuteroxycarbonyl (trans-DOCO) radical has been explored at suppressed-Doppler resolution via direct infrared absorption spectroscopy. The trans-DOCO is produced in a supersonic slit discharge of rare-gas/CO mixture doped with D 2 O, whereby the OD forms an energized adduct with CO, cooling in the supersonic expansion and stabilizing DOCO in the trans well. Active laser-frequency stabilization and collisional quenching of Doppler broadening along the slit axis yield <10 MHz frequency precision, with the absorbance noise approaching the quantum shot-noise limit. The current high-resolution spectral results are in excellent agreement with recent studies of the trans-DOCO radical by infrared frequency comb spectroscopy under room temperature conditions [Bui et al., Mol. Phys. 116, 3710 (2018)]. Combined with previous microwave/millimeter wave rotational studies, the suppressed-Doppler infrared data permit characterization of the vibrational ground state, improved structural parameters for the OD stretch vibrational level, and trans-DOCO spin-rotation information in both ground and excited vibrational states. Additionally, the infrared data reveal a-type and much weaker b-type contributions to the spectrum, analysis of which yields orientation of the OD stretch transition dipole moment in the body fixed frame. Of dynamical interest is whether the nascent trans-DOCO complex formed in the entrance channel has sufficient time to convert into the cis-DOCO isomer, or whether this is quenched by rapid stabilization into the trans-DOCO well. Finally, ab initio and Rice–Ramsperger–Kassel–Marcus analysis of the intrinsic reaction coordinate for trans-DOCO to cis-DOCO interconversion rates supports the latter scenario, which helps explain the failure of previous high resolution infrared efforts to detect cis-hydroxycarbonyl.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Frequency analysis and resonant operation for efficient capacitive deionization

Capacitive deionization (CDI) performance metrics can vary widely with operating methods. Conventional CDI operating methods such as constant current and constant voltage show advantages in either energy or salt removal performance, but not both. We here develop a theory around and experimentally demonstrate a new operation for CDI that uses sinusoidal forcing voltage (or sinusoidal current). We use a dynamic system modeling approach, and quantify the frequency response (amplitude and phase) of CDI effluent concentration. Using a wide range of operating conditions, we demonstrate that CDI can be modeled as a linear time invariant system. We validate this model with experiments, and show that a sinusoid voltage operation can simultaneously achieve high salt removal and strong energy performance, thus very likely making it superior to other conventional operating methods. Based on the underlying coupled phenomena of electrical charge (and ionic) transfer with bulk advection in CDI, we derive and validate experimentally the concept of using sinusoidal voltage forcing functions to achieve resonance-type operation for CDI. Despite the complexities of the system, we find a simple relation for the resonant time scale: the resonant time period (frequency) is proportional (inversely proportional) to the geometric mean of the flow residence time and the electrical (RC) charging time. Operation at resonance implies the optimal balance between absolute amount of salt removed (in moles) and dilution (depending on the feed volume processed), thus resulting in the maximum average concentration reduction for the desalinated water. We further develop our model to generalize the resonant time-scale operation, and provide responses for square and triangular voltage waveforms as two examples. To this end, we develop a general tool that uses Fourier analysis to construct CDI effluent dynamics for arbitrary input waveforms. Using this tool, we show that most of the salt removal (~95%) for square and triangular voltage forcing waveforms is achieved by the fundamental Fourier (sinusoidal) mode. The frequency of higher Fourier modes precludes high flow efficiency for these modes, so these modes consume additional energy for minimal additional salt removed. This deficiency of higher frequency modes further highlights the advantage of DC-offset sinusoidal forcing for CDI operation.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Data-Driven Method for Nonlinear Modal Interaction Identification in Fighter Aircraft

The purpose of this paper is to report a new data-driven analysis methodology for identifying nonlinear modal interactions and its application to aeroelastic wind-tunnel data from a generic fighter configuration, which reveals global modal interactions in this system caused by multiple resonance capture events initiated by local nonlinearities. It is shown that during supersonic testing at the Transonic Dynamics Tunnel, vibro-impacts at the embedded external fuel tank shakers on the inboard underwing stations of the generic fighter introduce strong nonlinearity that gives rise to nonlinear modal interactions. Specifically, time–frequency analysis of the acceleration data demonstrates that 6∶5 and 7∶6 transient resonance captures occur across the aircraft exclusively during this vibro-impact forcing window. Further analysis suggests that these resonance captures are dependent on Mach number. These results show experimentally that local vibro-impacts can cause global nonlinear effects in an aeroelastic system and that these effects can be identified using the new methodology herein. The data-driven analysis scheme employed shows applicability to full-aircraft flight test data for identifying nonlinear modal interactions without knowledge of the precise nonlinear contributors.

nonlinear dynamics↗

High-Fidelity Flight Dynamic Analysis of Transonic Truss-Braced Wing

This paper presents a high-fidelity flight dynamic analysis of the Mach 0.8 Transonic Truss-Braced Wing (TTBW). Unsteady RANS CFD simulations of the Mach 0.8 TTBW in pitch, plunge, roll, and yaw oscillations are conducted in FUN3D. The time-domain data are transformed into the frequency-domain data by Fourier series. Transfer functions of the dynamic stability derivatives are then estimated by a frequency-domain re- gression. The dynamic stability derivatives with respect to the angle of attack are determined by the regression of the unsteady aerodynamic coefficients for the plunge motion. The dynamic stability derivatives with re- spect to the pitch rate are determined by the regression of the differential unsteady aerodynamic coefficients for the pitch motion upon the removal of the angle of attack contribution by the plunge motion. Similarly, dynamic stability derivatives with respect to the angle of sideslip, roll rate, and yaw rates are determined from the frequency domain regression. The longitudinal and lateral-direction flight dynamic models of the Mach 0.8 TTBW are constructed from these dynamic stability derivatives. The eigenvalues of the aircraft modes are analyzed to determine the vehicle stability.

Aircraft Stability and Control↗

On-Line Robust Modal Stability Prediction using Wavelet Processing

Wavelet analysis for filtering and system identification has been used to improve the estimation of aeroservoelastic stability margins. The conservatism of the robust stability margins is reduced with parametric and nonparametric time- frequency analysis of flight data in the model validation process. Nonparametric wavelet processing of data is used to reduce the effects of external disturbances and unmodeled dynamics. Parametric estimates of modal stability are also extracted using the wavelet transform. Computation of robust stability margins for stability boundary prediction depends on uncertainty descriptions derived from the data for model validation. The F-18 High Alpha Research Vehicle aeroservoelastic flight test data demonstrates improved robust stability prediction by extension of the stability boundary beyond the flight regime. Guidelines and computation times are presented to show the efficiency and practical aspects of these procedures for on-line implementation. Feasibility of the method is shown for processing flight data from time- varying nonstationary test points.

Brenner, Martin J.↗

The Effect of the Madden‐Julian Oscillation on the Mesospheric Migrating Diurnal Tide: A Study Using SD‐WACCM

Abstract The response of the mesospheric migrating diurnal (DW1) tide to the Madden‐Julian oscillation (MJO) is investigated for the first time using a simulation from the Specified‐Dynamic Whole Atmosphere Community Climate Model (SD‐WACCM), which is driven by reanalysis data. Analysis shows that a significant connection exists between the MJO and the mesospheric DW1 tidal amplitude. During MJO phases 2 and 3, the convection anomalies are associated with enhancement in both the solar insolation absorption and latent heat release in the equatorial troposphere; these in turn lead to stronger DW1 forcing. Conversely, the forcing of DW1 by solar and latent heating in the troposphere is weaker during MJO phase 8. The difference of the tidal amplitude during the opposite MJO phases from the boreal winter mean state is ~15–20%. The parameterized gravity wave variations are found to have a significant impact on the DW1 tidal response in some phases of the MJO.

Yang, Chengyun↗

Ultrafast molecular frame electronic coherences from lab frame scattering anisotropies

Electronic coherences in molecules are ultrafast charge oscillations on the molecular frame (MF) and their direct observation and separation from electronic population dynamics is challenging. Here we present a valence shell lab frame (LF) scattering method suited to probing electronic coherences in isolated systems. MF electronic coherences lead to LF electronic anisotropies observable by ultrafast angle-resolved scattering. Moment analysis of the LF anisotropy completely separates electronic coherences from population dynamics, demonstrated in excited state NH 3 using ultrafast time-energy-angle-resolved photoelectron spectroscopy. Overall, this general approach applies equally to attosecond/femtosecond electronic coherences in isolated systems.

74 ATOMIC AND MOLECULAR PHYSICS↗

Theory of x-ray photon correlation spectroscopy for multiscale flows

Complex multiscale flows associated with instabilities and turbulence are commonly induced under high-energy density (HED) conditions, but accurate measurement of their transport properties has been challenging. X-ray photon correlation spectroscopy (XPCS) with coherent x-ray sources can, in principle, probe material dynamics to infer transport properties using time autocorrelation of density fluctuations. Here we develop a theoretical framework for utilizing XPCS to study material diffusivity in multiscale flows. We extend single-scale shear flow theories to broadband flows using a multiscale analysis that captures shear and diffusion dynamics. Our theory is validated with simulated XPCS for Brownian particles advected in multiscale flows. We demonstrate the versatility of the method over several orders of magnitude in timescale using sequential-pulse XPCS, single-pulse x-ray speckle visibility spectroscopy (XSVS), and double-pulse XSVS.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

On Computation of Koopman Operator from Sparse Data

In this paper, we propose a novel approach to compute the Koopman operator from sparse time series data. In recent years there has a considerable interest in operator theoretic methods for data-driven analysis of dynamical systems and existing techniques for the approximation of the Koopman operator require rich enough data-sets. However, in many applications, the data set may not be rich enough to approximate the operators to acceptable limits. In this paper, using ideas from robust optimization, we propose an algorithm to compute the Koopman operator from sparse data. In particular, we enrich the sparse data set with artificial data points and use robust optimization techniques to obtain the transfer operator. We illustrate the efficiency of our proposed approach in three different dynamical systems, namely, a linear system, a nonlinear system and a dynamical system governed by a partial differential equation.

Sinha, Subhrajit↗

Induced shock pulse testing by transient waveform control

A method of synthesizing an arbitrarily shaped transient time pulse on vibration exciters is described. The transient waveform control technique is based on recent developments in digital time series analysis, the real-time FFT processor. A brief description of the theory, error estimates and hardware/software implementation to the JPL Dynamic Environmental Testing Laboratory is presented.

Kim, B. K.↗

Dynamic tooth loads and stressing for high contact ratio spur gears

A time history, closed form solution is presented for a dynamic model of spur gear systems for all practical contact ratios. The analysis determines the dynamic response of the gear system and the associated tooth loads and stressing. The dynamic model assumes the two gears act as a rigid inertia and the teeth act as a variable spring of a dynamic system excited by the meshing action of the teeth. Included in the analysis are the effects of the nonlinearity of the tooth pair stiffness during mesh, the tooth errors, and the tooth profile modifications. Besides reviewing the features, solution, and program of this analysis, preliminary results from applying the analysis are presented, which show that tooth profile modification, system inertia and damping, and system critical speeds can affect the dynamic gear tooth loads and stressing significantly.

Cornell, R. W.↗