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At least 739 records · Page 41

TOUGHREACT V4.12

TOUGHREACT V4.12 is a 3-D reactive transport code that handles to non-isothermal, multiphase/multicomponent fluid flow, heat transport, aqueous and gaseous species advection-diffusion, and equilibrium/kinetic water-gas-rock-biological reactions. TOUGHREACT V4.12 is based on TOUGHREACT V3.3, with several new features including: an option to compute activity coefficients using the Pitzer ion interaction model; implementation of ECO2N V2.0 for temperatures up to 300 C; options to simulate forward and reverse osmosis, including 2D Poiseuille flow; addition of EOS8 and revisions for EOS5 and EWASG with H2(g); addition of gas species decay, various new output formats and time step control options; many bug fixes.

Spycher, Nicolas↗

Predicting Failure Using Deep Learning SAND Report

Accurate prediction of ductile failure is critical to Sandia’s NW mission, but the models are computationally heavy. The costs of including high-fidelity physics and mechanics that are germane to the failure mechanisms are often too burdensome for analysts either because of the person-hours it requires to input them or because of the additional computational time, or both. In an effort to deliver analysts a tool for representing these phenomena with minimal impact to their existing workflow, our project sought to develop modern data-driven methods that would add microstructural information to business-as-usual calculations and expedite failure predictions. The goal is a tool that receives as input a structural model with stress and strain fields, as well as a machine-learned model, and output predictions of structural response in time, including failure. As such, our project spent substantial time performing high-fidelity, three-dimensional experiments to elucidate materials mechanisms of void nucleation and evolution. We developed crystal-plasticity finite-element models from the experimental observations to enrich the findings with fields not readily measured. We developed engineering length-scale simulations of replicated test specimens to understand how the engineering fields evolve in the presence of fine-scale defects. Finally, we developed deep learning convolutional neural networks, and graph-based neural networks to encode the findings of the experiments and simulations and make forward predictions in time for structural performance. This project demonstrated the power of data-driven methods for model development, which have the potential to vastly increase both the accuracy and speed of failure predictions. These benefits and the methods necessary to develop them are highlighted in this report. However, many challenges remain to implementing these in real applications, and these are discussed along with potential methods for overcoming them.

97 MATHEMATICS AND COMPUTING↗

Ground-motions site and event specificity: Insights from assessing a suite of simulated ground motions in the San Francisco Bay Area

This article presents the results of a research that is part of a larger collaborative effort between the Lawrence Berkeley National Laboratory and the Pacific Earthquake Engineering Research Center, funded by the US Department of Energy Office of Cybersecurity, Energy Security and Emergency Response. The main objective of this study is to assess a suite of near and far-field simulated ground motions obtained from 20 realizations of an M7 Hayward Fault earthquake in the San Francisco Bay Area, California USA, and inform the selection of rupture simulation parameters leading to strong motions. To this aim, comparisons are conducted with NGA-W2 and directivity ground-motion models and a selected population of records. An archetypal steel moment-resisting frame is utilized to assess infrastructure response distributions. The analyses carried out for each simulated event and subdomain with consistent properties in terms of shallow shear-wave velocity proved to be instrumental for better interpreting the differences between simulated motions and empirical models. The main reasons identified for variances between simulations and empirical relationships included (1) directivity effects fully captured by the simulations across the full breadth of rupture models; (2) site vicinity to ruptures that incorporate large-slip patches, particularly if these are in the forward-directivity direction; and (3) presence of geologic structures that can “trap” seismic waves and produce ground motions with large amplitude and long signal duration. The analyses carried out in this work provide a path for interpreting ground-motion site and event specificity obtained from a suite of physics-based simulations, differing only in the rupture model characterization, to inform the selection of simulation scenarios for site-specific engineering analyses under strong excitations. Evidence from this work points to the possibility that current hazard models may underestimate ground-motion intensities in areas where the combined effect of directivity and site conditions results in large ground-motion amplitudes.

58 GEOSCIENCES↗

Theoretical tools for neutrino scattering: interplay between lattice QCD, EFTs, nuclear physics, phenomenology, and neutrino event generators

Maximizing the discovery potential of increasingly precise neutrino experiments will require an improved theoretical understanding of neutrino-nucleus cross sections over a wide range of energies. Low-energy interactions are needed to reconstruct the energies of astrophysical neutrinos from supernovae bursts and search for new physics using increasingly precise measurement of coherent elastic neutrino scattering. Higher-energy interactions involve a variety of reaction mechanisms including quasi-elastic scattering, resonance production, and deep inelastic scattering that must all be included to reliably predict cross sections for energies relevant to DUNE and other accelerator neutrino experiments. Refined nuclear interaction models in these energy regimes will also be valuable for other applications, such as measurements of reactor, solar, and atmospheric neutrinos. This manuscript discusses the theoretical status, challenges, required resources, and path forward for achieving precise predictions of neutrino-nucleus scattering and emphasizes the need for a coordinated theoretical effort involved lattice QCD, nuclear effective theories, phenomenological models of the transition region, and event generators.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Optimization of Application-Driven Development of In Vitro Neuromuscular Junction Models

Neuromuscular junctions (NMJs) are specialized synapses responsible for signal transduction between motor neurons (MNs) and skeletal muscle tissue. Malfunction at this site can result from developmental disorders, toxic environmental exposures, and neurodegenerative diseases leading to severe neurological dysfunction. Exploring these conditions in human or animal subjects is restricted by ethical concerns and confounding environmental factors. Therefore, in vitro NMJ models provide exciting opportunities for advancements in tissue engineering. In the last two decades, multiple NMJ prototypes and platforms have been reported, and each model system design is strongly tied to a specific application: exploring developmental physiology, disease modeling, or high-throughput screening. Directing the differentiation of stem cells into mature MNs and/or skeletal muscle for NMJ modeling has provided critical cues to recapitulate early-stage development. Patient-derived inducible pluripotent stem cells provide a personalized approach to investigating NMJ disease, especially when disease etiology cannot be resolved down to a specific gene mutation. Having reproducible NMJ culture replicates is useful for high-throughput screening to evaluate drug toxicity and determine the impact of environmental threat exposures. Cutting-edge bioengineering techniques have propelled this field forward with innovative microfabrication and design approaches allowing both two-dimensional and three-dimensional NMJ culture models. Many of these NMJ systems require further validation for broader application by regulatory agencies, pharmaceutical companies, and the general research community. In this summary, we present a comprehensive review on the current state-of-art research in NMJ models and discuss their ability to provide valuable insight into cell and tissue interactions.

59 BASIC BIOLOGICAL SCIENCES↗

Machine learning models of intermittent operation of RO wellhead water treatment for salinity reduction and nitrate removal

Machine learning models were developed for intermittent multi-mode operation of a wellhead reverse osmosis water purification and desalination system to predict salt passage, nitrate passage, and permeate flux. The models, based on long short-term memory (LSTM) recurrent neural network (RNN) architecture, included an attention mechanism to increase model performance in proximity of the regulatory limit for nitrate. Training and testing of the models for the Startup, Production, Shutdown and Flushing operational modes were based on operational data (consisting of 22 process variables per data sample) acquired every 2–5 s over a six-month period. The significant sets of model input attributes for the different operational modes were assessed via Spearman ranking correlation, Self-Organizing Map (SOM) analysis and feed forward feature selection (FFFS). Although the variability of nitrate passage, salt passage and permeate flux was significant over the four operational modes, prediction performance for the three outcomes were with R2 and Average Absolute Relative Error (AARE) of 0.78–0.95 and 2.96–6.16 %, respectively. Model updates post membrane elements replacement demonstrated similar levels of prediction accuracy. The study results suggest that there is merit in exploring the utility of multi-mode models for sensor fault detection, data imputation, and for potential use in model-predictive control.

Intermittent RO operation↗

Time-series machine-learning error models for approximate solutions to parameterized dynamical systems

This work proposes a machine-learning framework for modeling the error incurred by approximate solutions to parameterized dynamical systems. In particular, we extend the machine-learning error models (MLEM) framework proposed in Ref. Freno and Carlberg (2019) to dynamical systems. The proposed Time-Series Machine-Learning Error Modeling (T-MLEM) method constructs a regression model that maps features – which comprise error indicators that are derived from standard a posteriori error-quantification techniques – to a random variable for the approximate-solution error at each time instance. The proposed framework considers a wide range of candidate features, regression methods, and additive noise models. We consider primarily recursive regression techniques developed for time-series modeling, including both classical time-series models (e.g., autoregressive models) and recurrent neural networks (RNNs), but also analyze standard non-recursive regression techniques (e.g., feed-forward neural networks) for comparative purposes. Finally, numerical experiments conducted on multiple benchmark problems illustrate that the long short-term memory (LSTM) neural network, which is a type of RNN, outperforms other methods and yields substantial improvements in error predictions over traditional approaches.

42 ENGINEERING↗

A review of computing-based automated fault detection and diagnosis of heating, ventilation and air conditioning systems

We report faults in Heating, Ventilation, and Air Conditioning (HVAC) systems of buildings result in significant energy waste in building operation. With fast-growing sensing data availability and advancement in computing, computational modeling has demonstrated strong capability to detect and diagnose HVAC system faults, hence, ensuring efficient building operation. This paper comprehensively reviews the state-of-the-art computing-based fault detection and diagnosis (FDD) for HVAC systems. Overall, the reviewed computing-based FDD methods are classified as two major approaches: knowledge-based and data-driven approaches. We then identify multiple important topics, including data availability, training data size, data quality, approach generality, capability, interpretability, and required modeling efforts, along with corresponding metrics to summarize the most updated FDD development. Generally, the knowledge-based approaches are further divided as physics-based modeling, Diagnostic Bayesian Network, and performance indicator-based methods while data-driven approaches include supervised learning, unsupervised learning, and regression and statistics-based methods. State-of-the-art FDD development, remaining challenges, and future research directions are further discussed to push forward FDD in practice. Availability of fault data, capability of existing methods to deal with complex fault situations (such as simultaneous faults), modeling interpretability for data-driven methods, and required engineering efforts for physics-based methods are identified as remaining challenges in FDD development. Improving modeling fidelity and reducing modeling efforts are essential for applying physics-based methods in real buildings. Meanwhile, addressing fault data availability, increasing algorithm adaptability, and handling multiple faults are essential to further enhance the applicability of data-driven FDD approaches.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Artificial neural networks estimate evapotranspiration for Miscanthus × giganteus as effectively as empirical model but with fewer inputs

Estimating actual evapotranspiration (ET) is particularly crucial for addressing how vegetation affects the water balance of ecosystems. ET estimation can be complex with empirical models due to their many parameters and reliance on aridity. In contrast, artificial neural networks (ANNs) could potentially estimate ET with fewer and more common meteorological parameters. In this study, we trained two ANNs, one using a feed-forward approach (FFN) and the other a nonlinear auto-regressive network (NARX), to predict ET and compared them to the commonly used empirical model Granger and Gray (GG). We trained our models on a nine-year eddy covariance (EC) dataset for Miscanthu s × giganteus ( M . × giganteus ) from Illinois (UIEF), then tested them using out-of-sample data from both UIEF and a different location in Iowa (SABR) to compare the accuracy of FFN, NARX, and GG models in estimating daily ET. A combination of air temperature (T a ) and solar radiation (R s ) was chosen as inputs due to the highest R 2 for FFN (R 2 = 0.79, 0.81, and 0.79 for training, testing, and validation, respectively) and only T a for NARX (R 2 = 0.70 for out-of-sample validation). The predictive power of the FFN model was superior to the NARX and GG models at the UIEF site (R 2 = 0.84, 0.70, and 0.83 for out-of-sample validation, respectively). Our analysis showed that ANN approaches are as accurate as empirical approaches for estimating ET but use fewer inputs.

54 ENVIRONMENTAL SCIENCES↗

Kernel learning backward SDE filter for data assimilation

In this paper, we develop a kernel learning backward SDE filter method to estimate the state of a stochastic dynamical system based on its partial noisy observations. A system of forward backward stochastic differential equations is used to propagate the state of the target dynamical model, and Bayesian inference is applied to incorporate the observational information. Further, to characterize the dynamical model in the entire state space, we introduce a kernel learning method to learn a continuous global approximation for the conditional probability density function of the target state by using discrete approximated density values as training data. Numerical experiments demonstrate that the kernel learning backward SDE is highly effective.

97 MATHEMATICS AND COMPUTING↗

A flexible event reconstruction based on machine learning and likelihood principles

Event reconstruction is a central step in many particle physics experiments, turning detector observables into parameter estimates; for example estimating the energy of an interaction given the sensor readout of a detector. A corresponding likelihood function is often intractable, and approximations need to be constructed. Here, in our work, we first show how the full likelihood for a many-sensor detector can be broken apart into smaller terms, and secondly how we can train neural networks to approximate all terms solely based on forward simulation. Our technique results in a fast, flexible, and close-to-optimal surrogate model proportional to the likelihood and can be used in conjunction with standard inference techniques allowing for a consistent treatment of uncertainties. We illustrate our technique for parameter inference in neutrino telescopes based on maximum likelihood and Bayesian posterior sampling. Given its great flexibility, we also showcase our method for geometry optimization enabling to learn optimal detector designs. Lastly, we apply our method to realistic simulation of a ton-scale water-based liquid scintillator detector.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

cGAS-like receptors sense RNA and control 3'2'-cGAMP signalling in Drosophila

Cyclic GMP–AMP synthase (cGAS) is a cytosolic DNA sensor that produces the second messenger cG[2'–5']pA[3'–5']p (2'3'-cGAMP) and controls activation of innate immunity in mammalian cells. Animal genomes typically encode multiple proteins with predicted homology to cGAS, but the function of these uncharacterized enzymes is unknown. Here we show that cGAS-like receptors (cGLRs) are innate immune sensors that are capable of recognizing divergent molecular patterns and catalysing synthesis of distinct nucleotide second messenger signals. Crystal structures of human and insect cGLRs reveal a nucleotidyltransferase signalling core shared with cGAS and a diversified primary ligand-binding surface modified with notable insertions and deletions. We demonstrate that surface remodelling of cGLRs enables altered ligand specificity and used a forward biochemical screen to identify cGLR1 as a double-stranded RNA sensor in the model organism Drosophila melanogaster. We show that RNA recognition activates Drosophila cGLR1 to synthesize the novel product cG[3'–5']pA[2'–5']p (3'2'-cGAMP). A crystal structure of Drosophila stimulator of interferon genes (dSTING) in complex with 3'2'-cGAMP explains selective isomer recognition, and 3'2'-cGAMP induces an enhanced antiviral state in vivo that protects from viral infection. Similar to radiation of Toll-like receptors in pathogen immunity, our results establish cGLRs as a diverse family of metazoan pattern recognition receptors.

59 BASIC BIOLOGICAL SCIENCES↗

The Forward Physics Facility at the High-Luminosity LHC

High energy collisions at the High-Luminosity Large Hadron Collider (LHC) produce a large number of particles along the beam collision axis, outside of the acceptance of existing LHC experiments. The proposed Forward Physics Facility (FPF), to be located several hundred meters from the ATLAS interaction point and shielded by concrete and rock, will host a suite of experiments to probe standard model (SM) processes and search for physics beyond the standard model (BSM). In this report, we review the status of the civil engineering plans and the experiments to explore the diverse physics signals that can be uniquely probed in the forward region. FPF experiments will be sensitive to a broad range of BSM physics through searches for new particle scattering or decay signatures and deviations from SM expectations in high statistics analyses with TeV neutrinos in this low-background environment. High statistics neutrino detection will also provide valuable data for fundamental topics in perturbative and non-perturbative QCD and in weak interactions. Experiments at the FPF will enable synergies between forward particle production at the LHC and astroparticle physics to be exploited. We report here on these physics topics, on infrastructure, detector, and simulation studies, and on future directions to realize the FPF’s physics potential.

47 OTHER INSTRUMENTATION↗

Hyphae move matter and microbes to mineral microsites: Integrating the hyphosphere into conceptual models of soil organic matter stabilization

Associations between soil minerals and microbially derived organic matter (often referred to as mineral-associated organic matter or MAOM) form a large pool of slowly cycling carbon (C). Here, the rhizosphere, soil immediately adjacent to roots, is thought to control the spatial extent of MAOM formation because it is the dominant entry point of new C inputs to soil. However, emphasis on the rhizosphere implicitly assumes that microbial redistribution of C into bulk (non-rhizosphere) soils is minimal. We question this assumption, arguing that because of extensive fungal exploration and rapid hyphal turnover, fungal redistribution of soil C from the rhizosphere to bulk soil minerals is common, and encourages MAOM formation. First, we summarize published estimates of fungal hyphal length density and turnover rates and demonstrate that fungal C inputs are high throughout the rhizosphere–bulk soil continuum. Second, because colonization of hyphal surfaces is a common dispersal mechanism for soil bacteria, we argue that hyphal exploration allows for the non-random colonization of mineral surfaces by hyphae-associated taxa. Third, these bacterial communities and their fungal hosts determine the chemical form of organic matter deposited on colonized mineral surfaces. Collectively, our analysis demonstrates that omission of the hyphosphere from conceptual models of soil C flow overlooks key mechanisms for MAOM formation in bulk soils. Moving forward, there is a clear need for spatially explicit, quantitative research characterizing the environmental drivers of hyphal exploration and hyphosphere community composition across systems, as these are important controls over the rate and organic chemistry of C deposited on minerals.

54 ENVIRONMENTAL SCIENCES↗

The Best of Both Worlds: Combined Thermal and Battery Storage for Widespread Building Decarbonization

To meet 2050 decarbonization targets, widespread building electrification is a critical complement to clean power generation. Behind-the-meter storage (BTMS) (e.g., battery electric energy storage [EES] and thermal energy storage [TES]) integrated with buildings or building end uses to store and supply energy at optimal times can minimize burdens associated with operation, planning, and upgrades to the electrical grid sometimes triggered by building electrification. Such BTMS systems can serve the dual purpose of providing enhanced resilience at the building and grid level, and support the deployment of renewable generation needed for wide-scale decarbonization. While TES can cost-effectively shed and shift thermal loads, it cannot generally backup or shift non-thermal building end uses. EES, by contrast, is more expensive, but applicable to all end uses (i.e., thermal and electrical loads). Combined together, these storage systems can be traded off against one another to perform optimally in meeting demand flexibility, decarbonization goals, and energy resilience of the buildings at a lower total system cost. This paper proposes a framework to define BTMS benefits, provides four illustrative electrification scenarios using TES and EES, and discusses the combined TES/EES benefits with building energy modeling results. The paper also highlights potential barriers to adoption of BTMS and a path forward.

buildings↗

Measurements of scattering and absorption properties of submillimeter bauxite and silica particles

Submillimeter solid particles have been considered as thermal storage media for concentrated solar power applications. Knowledge of the scattering and absorption properties of individual particles is crucial for modeling the radiative heat transfer of the particle bed. In this work, a laser scatterometer is used to measure the single-particle scattering properties at a wavelength of 635 nm by using two configurations: (1) a falling particle curtain and (2) a taped particle layer. Because a one-particle nominal thickness is formed with area fractions of 5-55% depending on the configuration, multiple scattering is minimized and hence the single scattering phase function, averaged over all illuminated particles, is directly measured. Bauxite-based ceramic particles that are strongly absorbing in the solar spectrum and silica particles that are nonabsorbing in the visible and near-infrared are investigated. The directional-hemispherical reflectance and transmittance of the taped particles are also measured to deduce the forward and backward scattering efficiency factors and the absorption efficiency factors. Only weak wavelength dependence is observed in the measured region from 380 nm to 1020 nm. Furthermore, the scattering phase functions of all bauxite-based particles with varying sizes and compositions are very similar and can be fitted to a Henyey-Greenstein phase function with an asymmetry factor g = -0.20. For the silica particles, forward scattering dominates and g = 0.45 yields the best fit. A Monte Carlo method is developed to model the particle scattering characteristics, and reasonable agreements between the modeling and experimental results are observed by introducing a specularity parameter.

42 ENGINEERING↗

New strategies for new physics search with Λ b → Λ ν ν ¯ decays

We examine the new physics sensitivity of the rare decay Λ b → Λ ν ν ¯ , which can be accessible at future Z -pole machines like Future Circular Collider and Circular Electron Positron Collider. We find that the longitudinal polarization of Λ b baryons produced in Z decays introduces a novel observable, the forward-backward asymmetry A FB ↑ in the angle between the outgoing Λ momentum and the Λ b spin. We provide Standard Model predictions for the Λ b → Λ ν ν ¯ branching ratio and A FB ↑ , and show that future precision measurements of these observables are complementary and probe new physics scales comparable to other b → s ν ν ¯ and b → s ℓ + ℓ − processes. We also show that the zero crossing of the forward-backward asymmetry offers a robust test of form factor calculations independent of new physics. Published by the American Physical Society 2025

Altmannshofer, Wolfgang (ORCID:0000000316212561)↗