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At least 559 records · Page 31

Cosmological preference for a negative neutrino mass

The most precise determination of the sum of neutrino masses from cosmological data, derived from analysis of the cosmic microwave background (CMB) and baryon acoustic acoustic oscillations (BAO) from the Dark Energy Spectroscopic Instrument (DESI), favors a value below the minimum inferred from neutrino flavor oscillation experiments. We explore which data is most responsible of this puzzling aspect of the current constraints on neutrino mass and whether it is related to other anomalies in cosmology. We demonstrate conclusively that the preference for negative neutrino masses is a consequence of larger than expected lensing of the CMB in both the two- and four-point lensing statistics. Furthermore, we show that this preference is robust to changes in likelihoods of the BAO and CMB optical depth analyses given the available data. We then show that this excess clustering is not easily explained by changes to the expansion history and is likely distinct from the preference for for dynamical dark energy in DESI BAO data. Finally, we discuss how future data may impact these results, including an analysis of Planck CMB with mock DESI 5-year data. Here, we conclude that the negative neutrino mass preference is likely to persist even as more cosmological data is collected in the near future.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Characterization of Low-mass Companions to Kepler Objects of Interest Observed with APOGEE-N

We report the characterization of 28 low-mass (0.02 M ⊙ ≤ M 2 ≤ 0.25 M ⊙ ) companions to Kepler objects of interest (KOIs), eight of which were previously designated confirmed planets. These objects were detected as transiting companions to Sunlike stars (G and F dwarfs) by the Kepler mission and are confirmed as single-lined spectroscopic binaries in the current work using the northern multiplexed Apache Point Observatory Galactic Evolution Experiment near-infrared spectrograph (APOGEE-N) as part of the third and fourth Sloan Digital Sky Surveys. We have observed hundreds of KOIs using APOGEE-N and collected a total of 43,175 spectra with a median of 19 visits and a median baseline of ~1.9 yr per target. We jointly model the Kepler photometry and APOGEE-N radial velocities to derive fundamental parameters for this subset of 28 transiting companions. The radii for most of these low-mass companions are overinflated (by ~10%) when compared to theoretical models. Tidally locked M dwarfs on short-period orbits show the largest amount of inflation, but inflation is also evident for companions that are well separated from the host star. We demonstrate that APOGEE-N data provide reliable radial velocities when compared to precise high-resolution spectrographs that enable detailed characterization of individual systems and the inference of orbital elements for faint (H > 12) KOIs. The data from the entire APOGEE-KOI program are public and present an opportunity to characterize an extensive subset of the binary population observed by Kepler.

79 ASTRONOMY AND ASTROPHYSICS↗

KilonovaNet : Surrogate models of kilonova spectra with conditional variational autoencoders

ABSTRACT Detailed radiative transfer simulations of kilonova spectra play an essential role in multimessenger astrophysics. Using the simulation results in parameter inference studies requires building a surrogate model from the simulation outputs to use in algorithms requiring sampling. In this work, we present kilonovanet, an implementation of conditional variational autoencoders (cVAEs) for the construction of surrogate models of kilonova spectra. This method can be trained on spectra directly, removing overhead time of pre-processing spectra, and greatly speeds up parameter inference time. We build surrogate models of three state-of-the-art kilonova simulation data sets and present in-depth surrogate error evaluation methods, which can in general be applied to any surrogate construction method. By creating synthetic photometric observations from the spectral surrogate, we perform parameter inference for the observed light-curve data of GW170817 and compare the results with previous analyses. Given the speed with which kilonovanet performs during parameter inference, it will serve as a useful tool in future gravitational wave observing runs to quickly analyse potential kilonova candidates.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Nonlinear encoding in diffractive information processing using linear optical materials

Nonlinear encoding of optical information can be achieved using various forms of data representation. Here, we analyze the performances of different nonlinear information encoding strategies that can be employed in diffractive optical processors based on linear materials and shed light on their utility and performance gaps compared to the state-of-the-art digital deep neural networks. For a comprehensive evaluation, we used different datasets to compare the statistical inference performance of simpler-to-implement nonlinear encoding strategies that involve, e.g., phase encoding, against data repetition-based nonlinear encoding strategies. We show that data repetition within a diffractive volume (e.g., through an optical cavity or cascaded introduction of the input data) causes the loss of the universal linear transformation capability of a diffractive optical processor. Therefore, data repetition-based diffractive blocks cannot provide optical analogs to fully connected or convolutional layers commonly employed in digital neural networks. However, they can still be effectively trained for specific inference tasks and achieve enhanced accuracy, benefiting from the nonlinear encoding of the input information. Our results also reveal that phase encoding of input information without data repetition provides a simpler nonlinear encoding strategy with comparable statistical inference accuracy to data repetition-based diffractive processors. Our analyses and conclusions would be of broad interest to explore the push-pull relationship between linear material-based diffractive optical systems and nonlinear encoding strategies in visual information processors.

42 ENGINEERING↗

Injection data analysis using material balance time for CO 2 storage capacity estimation in deep closed saline aquifers

Estimating the ultimate storage capacity of deep saline aquifers is important to address the formation potential to store the envisioned large volumes of CO 2 . Injection data (i.e. injection rate, bottomhole pressure, and cumulative injected volume of CO 2 ) are routinely recorded during storage operations. These data contain valuable information on the subsurface (e.g. the reservoir pore volume and the formation storage capacity) that can be extracted. In this paper, we present a two-step graphical technique to infer the pore volume and the ultimate storage capacity of closed saline aquifers by analyzing the available injection data. First, the pore volume is inferred through adapting the concept of the material balance time. Material balance time is an approximate superposition time function developed to interpret production data from oil and gas wells operating at variable pressure/rate conditions during the boundary-dominated flow period. Using material balance techniques, the ultimate storage capacity is then estimated through linear extrapolation of the average pressure trend to the maximum allowable pressure the formation can withstand. The average pressure is not available in practice, but is can be obtained from the injection data. Two approaches are presented in this study to calculate the average pressure; namely the rigorous and the approximate approaches. Unlike the rigorous approach, the approximate approach does not require a prior knowledge of some reservoir properties (e.g. relative permeability, absolute permeability, formation porosity and thickness) to calculate the average pressure. To investigate its potential and reliability in analyzing CO 2 injection data, the proposed technique is applied to four synthetic cases representing different well operating conditions. Results indicate that the approximate approach consistently overestimates the actual (simulated) storage capacity as compared to the rigorous approach. The agreement - between the inferred and the simulated reservoir pore volume, and between the analytical and numerical estimates of storage capacity - validates the potential application of the technique to CO 2 storage in closed saline aquifers. The technique is further substantiated through application to a field data set utilized from a commercial-scale geological storage (CGS) project. Finally, field data interpretation shows that the proposed technique can be utilized to identify the degree of hydraulic continuity and reservoir compartmentalization within a target formation by interpreting the corresponding pressure and rate responses.

02 PETROLEUM↗

Combination of cluster number counts and two-point correlations: validation on mock Dark Energy Survey

ABSTRACT We present a method of combining cluster abundances and large-scale two-point correlations, namely galaxy clustering, galaxy–cluster cross-correlations, cluster autocorrelations, and cluster lensing. This data vector yields comparable cosmological constraints to traditional analyses that rely on small-scale cluster lensing for mass calibration. We use cosmological survey simulations designed to resemble the Dark Energy Survey Year 1 (DES-Y1) data to validate the analytical covariance matrix and the parameter inferences. The posterior distribution from the analysis of simulations is statistically consistent with the absence of systematic biases detectable at the precision of the DES-Y1 experiment. We compare the χ2 values in simulations to their expectation and find no significant difference. The robustness of our results against a variety of systematic effects is verified using a simulated likelihood analysis of DES-Y1-like data vectors. This work presents the first-ever end-to-end validation of a cluster abundance cosmological analysis on galaxy catalogue level simulations.

79 ASTRONOMY AND ASTROPHYSICS↗

Dark Energy Survey Year 3 results: Simulation-based 𝑤CDM inference from weak lensing and galaxy clustering maps with deep learning: Analysis design

Data-driven approaches using deep learning are emerging as powerful techniques to extract non-Gaussian information from cosmological large-scale structure. Here, this work presents the first simulation-based inference (SBI) pipeline that combines weak lensing and galaxy clustering maps in a realistic Dark Energy Survey Year 3 (DES Y3) configuration and serves as preparation for a forthcoming analysis of the survey data. We develop a scalable forward model based on the CosmoGridV1 suite of N-body simulations to generate over one million self-consistent mock realizations of DES Y3 at the map level. Leveraging this large dataset, we train deep graph convolutional neural networks on the full survey footprint in spherical geometry to learn low-dimensional features that approximately maximize mutual information with target parameters. These learned compressions enable neural density estimation of the implicit likelihood via normalizing flows in a ten-dimensional parameter space spanning cosmological 𝑤CDM, intrinsic alignment, and linear galaxy bias parameters, while marginalizing over baryonic, photometric redshift, and shear bias nuisances. To ensure robustness, we extensively validate our inference pipeline using synthetic observations derived from both systematic contaminations in our forward model and independent Buzzard galaxy catalogs. Our forecasts yield significant improvements in cosmological parameter constraints, achieving 2−3× higher figures of merit in the 𝛺 𝑚 − 𝑆 8 plane relative to our implementation of baseline two-point statistics and effectively breaking parameter degeneracies through probe combination. These results demonstrate the potential of SBI analyses powered by deep learning for upcoming Stage-IV wide-field imaging surveys.

Thomsen, A. [Zurich, ETH] (ORCID:0000000203099021)↗

A Dataset of CFD Simulated Industrial Furnace Images for Conditional Automatic Generation with GANs

The steel industry is constantly looking for ways to automate processes and improve efficiency. A standard practice in industry is to simulate how complex systems will operate before they are actually used. Some complex systems, including steel industry processes such as blast furnaces, require complex physics-based simulations utilizing computational fluid dynamics (CFD). These CFD physics-based simulations are very accurate but can take significant time and computational resources to process, resulting in challenges for the implementation of the models in real-world operational environments. In recent years, deep learning (DL) has been considered as a substitute for these CFD models. DL models can be trained on validated CFD simulation data and then used for industrial process inference. Previous DL-based solutions have made great contributions for industrial automation but are currently missing the additional visualization component that CFD simulations also provide. In this paper, we propose a dataset for simple DL generative approaches that can help to address this issue. The dataset and methodology under development to approach this prediction are discussed in this work.

Calix, Ricardo↗

Efficient kinetic thermal inverse modeling for organic material decomposition

The prevalent use of organic materials in manufacturing is a fire safety concern, and motivates the need for predictive thermal decomposition models. A critical component of predictive modeling is numerical inference of kinetic parameters from bench scale data. Currently, an active area of computational pyrolysis research focuses on identifying efficient, robust methods for optimization. This paper demonstrates that kinetic parameter calibration problems can successfully be solved using classical gradient-based optimization. We explore calibration examples that exhibit characteristics of concern: high nonlinearity, high dimensionality, complicated schemes, overlapping reactions, noisy data, and poor initial guesses. The examples demonstrate that a simple, non-invasive change to the problem formulation can simultaneously avoid local minima, avoid computation of derivative matrices, achieve a computational efficiency speedup of 10x, and make optimization robust to perturbations of parameter components. Techniques from the mathematical optimization and inverse problem communities are employed. By re-examining gradient-based algorithms, we highlight opportunities to develop kinetic parameter calibration methods that should outperform current methods.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Updated neutrino mass constraints from galaxy clustering and CMB lensing-galaxy cross-correlation measurements

In this work, we revisit cosmological constraints on the sum of the neutrino masses Σm v from a combination of full-shape BOSS galaxy clustering [P(k)] data and measurements of the cross-correlation between Planck Cosmic Microwave Background (CMB) lensing convergence and BOSS galaxy overdensity maps [$C_{l}^{kg}$], using a simple but theoretically motivated model for the scale-dependent galaxy bias in auto- and cross-correlation measurements. We improve upon earlier related work in several respects, particularly through a more accurate treatment of the correlation and covariance between P(k) and $C_{l}^{kg}$ measurements. When combining these measurements with Planck CMB data, we find a 95% confidence level upper limit of Σm v sum of neutrino masses < 0.14 eV, while slightly weaker limits are obtained when including small-scale ACTPol CMB data, in agreement with our expectations. We confirm earlier findings that (once combined with CMB data) the full-shape information content is comparable to the geometrical information content in the reconstructed BAO peaks given the precision of current galaxy clustering data, discuss the physical significance of our inferred bias and shot noise parameters, and perform a number of robustness tests on our underlying model. While the inclusion of $C_{l}^{kg}$ measurements does not currently appear to lead to substantial improvements in the resulting Σm v of neutrino mass constraints, we expect the converse to be true for near-future galaxy clustering measurements, whose shape information content will eventually supersede the geometrical one.

79 ASTRONOMY AND ASTROPHYSICS↗

Solving the puzzle of Fe homeostasis by integrating molecular, mathematical, and societal models

To ensure optimal utilization and bioavailability, iron uptake, transport, subcellular localization, and assimilation are tightly regulated in plants. In this work, we examine recent advances in our understanding of cellular responses to Fe deficiency. We then use intracellular mechanisms of Fe homeostasis to discuss how formalizing cell biology knowledge via a mathematical model can advance discovery even when quantitative data is limited. Using simulation-based inference to identify plausible systems mechanisms that conform to known emergent phenotypes can yield novel, testable hypotheses to guide targeted experiments. However, this approach relies on the accurate encoding of domain-expert knowledge in exploratory mathematical models. We argue that this would be facilitated by fostering more “systems thinking” life scientists and that diversifying your research team may be a practical path to achieve that goal.

59 BASIC BIOLOGICAL SCIENCES↗

Bayesian model-data comparison incorporating theoretical uncertainties

Accurate comparisons between theoretical models and experimental data are critical for scientific progress. However, inferred physical model parameters can vary significantly with the chosen physics model, highlighting the importance of properly accounting for theoretical uncertainties. In this Letter, we present a Bayesian framework that explicitly quantifies these uncertainties by statistically modeling theory errors, guided by qualitative knowledge of a theory’s varying reliability across the input domain. We demonstrate the effectiveness of this approach using two systems: a simple ball drop experiment and multi-stage heavy-ion simulations. In both cases incorporating model discrepancy leads to improved parameter estimates, with systematic improvements observed as additional experimental observables are integrated.

Bayesian methods↗

Enhancing the Quality and Reliability of Machine Learning Interatomic Potentials through Better Reporting Practices

Recent developments in machine learning interatomic potentials (MLIPs) have empowered even nonexperts in machine learning to train MLIPs for accelerating materials simulations. However, reproducibility and independent evaluation of presented MLIP results is hindered by a lack of clear standards in current literature. In this Perspective, we aim to provide guidance on best practices for documenting MLIP use while walking the reader through the development and deployment of MLIPs including hardware and software requirements, generating training data, training models, validating predictions, and MLIP inference. We also suggest useful plotting practices and analyses to validate and boost confidence in the deployed models. Finally, we provide a step-by-step checklist for practitioners to use directly before publication to standardize the information to be reported. Altogether, we hope that our work will encourage the reliable and reproducible use of these MLIPs, which will accelerate their ability to make a positive impact in various disciplines including materials science, chemistry, and biology, among others.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Tuning the Lifetimes of Photoinduced Deligation in a Metal–Organic Framework via Linker Functionalization

Recently photoinduced dynamic ligation in a metal–organic frameworks (MOFs) was reported, where a long-lived charge-transfer excited state (ca. 30 μs) featuring partial dissociation between the carboxylate linker and metal-based node was probed by time-resolved infrared (TRIR) spectroscopy. The study offers a new mechanistic perspective to evaluate the potential contribution from the excited state molecular configuration to the performance of MOF photocatalysts. In this work, by employing MIL-101(Fe) as the study platform, we have further explored the influence of intramolecular interactions on the stability of relevant excited states and demonstrated the effective tuning of their lifetimes through the incorporation of different functional groups into the system. The correlations between the varied excited state lifetimes and coordination configurations with specific functional groups (−NH 2 or −NO 2 ) was inferred from the analyses of infrared spectroscopic data and theoretical calculations, revealing the essential role of the intramolecular interactions (i.e., between the added functional groups and the carboxylate group) in the modulation of system energetics. Overall, the work presents a pathway to tune the excited state dynamics and expands the knowledge regarding the photoinduced dynamic ligation in carboxylate-based MOFs.

excited states↗

Persistence and Plasticity in Conifer Water–Use Strategies

The selective use of seasonal precipitation by vegetation is critical to understanding the residence time and flow path of water in watersheds, yet there are limited datasets to test how climate alters these dynamics. Here, we use measurements of the seasonal cycle of tree ring δ 18 O for two widespread conifer species in the Rocky Mountains of North America to provide a multi-decadal depiction of the seasonal origins of forest water use. The results show that while the conifer tree stands had a dominant preference for use of snowmelt, there were multi-annual periods over the last four decades when use of summer precipitation was preferential. Utilization of summer rain emerged during years with increased snowfall and tree growth, suggesting that summer rain enhanced the transpiration stream only during the periods of highest water use. We hypothesize this could be explained through shallowing of the root profile during wetter periods and/or through the influence of changing water table depths on the residence time of summer precipitation in the root zone. We suggest the tree ring proxy approach used here could be applied in other watersheds to provide critical insight into the temporal dynamics of plant water use that could not be inferred from short measurement campaigns. Furthermore, these data on the seasonal origins of forest water are critical for understanding forest vulnerability to drought, the processes that affect precipitation pathways and residence time in watersheds and the interpretation of tree ring proxy data.

59 BASIC BIOLOGICAL SCIENCES↗

Mixed‐Phase Clouds Over the Southern Ocean as Observed From Satellite and Surface Based Lidar and Radar

Abstract This study investigates the occurrence of mixed‐phase clouds (MPC, i.e., cloud layers containing both liquid and ice water at sub‐freezing temperatures) over the Southern Ocean (SO) using space‐ and surface‐based lidar and radar observations. The occurrence of supercooled clouds is dominated by geometrically thin (<1 km) layers that rarely contain ice. We diagnose layers that are geometrically thicker than 1 km to contain ice ~65% and ~4% of the time from below by surface remote sensors and from above by orbiting remote sensors, respectively. We examine the discrepancy in MPC occurrence statistics as diagnosed from below and above the cloud layer. From above, we find that MPC occurrence has a gradient associated with the Antarctic Polar Front near 55°S with a rare occurrence of satellite‐derived MPC south of that latitude. In contrast, surface sensors find ice in 33% of supercooled liquid water layers. We infer using observing system simulation experiments and data analysis that space‐based lidar cannot identify the occurrence of MPC except when secondary ice‐forming processes operate in convection that is, sufficiently strong to loft ice crystals to cloud tops. We conclude that the CALIPSO phase statistics of MPC have a severe low bias in MPC occurrence. Based on surface‐based statistics in the SO, we present a parameterization of the frequency of MPC as a function of cloud top temperature that differs substantially from that used in recent climate model simulations.

54 ENVIRONMENTAL SCIENCES↗

Sensitivity Analysis of Genome-Scale Metabolic Flux Prediction

TRIMER, Transcription Regulation Integrated with MEtabolic Regulation, is a genome-scale modeling pipeline targeting at metabolic engineering applications. Using TRIMER, regulated metabolic reactions can be effectively predicted by integrative modeling of metabolic reactions with a Transcription Factor (TF)-gene regulatory network (TRN), which is modeled via a Bayesian network (BN). In this paper, we focus on sensitivity analysis of metabolic flux prediction for uncertainty quantification of BN structures for TRN modeling in TRIMER. We propose a computational strategy to construct the uncertainty class of TRN models based on the inferred regulatory order uncertainty given transcriptomic expression data. With that, we analyze the prediction sensitivity of the TRIMER pipeline for the metabolite yields of interest. The obtained sensitivity analyses can guide Optimal Experimental Design (OED) to help acquire new data that can enhance TRN modeling and achieve specific metabolic engineering objectives, including metabolite yield alterations. Here we have performed small- and large-scale simulated experiments, demonstrating the effectiveness of our developed sensitivity analysis strategy for BN structure learning to quantify the edge importance in terms of metabolic flux prediction uncertainty reduction and its potential to effectively guide OED.

59 BASIC BIOLOGICAL SCIENCES↗

The consequences of gamma-ray burst jet opening angle evolution on the inferred star formation rate

ABSTRACT Gamma-ray burst (GRB) data suggest that the jets from GRBs in the high redshift universe are more narrowly collimated than those at lower redshifts. This implies that we detect relatively fewer long GRB progenitor systems (i.e. massive stars) at high redshifts, because a greater fraction of GRBs have their jets pointed away from us. As a result, estimates of the star formation rate (SFR; from the GRB rate) at high redshifts may be diminished if this effect is not taken into account. In this paper, we estimate the SFR using the observed GRB rate, accounting for an evolving jet opening angle. We find that the SFR in the early universe (z > 3) can be up to an order of magnitude higher than the canonical estimates, depending on the severity of beaming angle evolution and the fraction of stars that make long GRBs. Additionally, we find an excess in the SFR at low redshifts, although this lessens when accounting for evolution of the beaming angle. Finally, under the assumption that GRBs do, in fact, trace canonical forms of the cosmic SFR, we constrain the resulting fraction of stars that must produce GRBs, again accounting for jet beaming-angle evolution. We find this assumption suggests a high fraction of stars in the early universe producing GRBs – a result that may, in fact, support our initial assertion that GRBs do not trace canonical estimates of the SFR.

79 ASTRONOMY AND ASTROPHYSICS↗