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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 487 records · Page 27
All sourcesNASA NTRSDOE OSTI
DOE OSTI2026

Report of the 2026 Workshop on Next-Generation Ecosystems for Scientific Computing: Harnessing Community, Software, and AI for Cross-Disciplinary Team Science

Scientific computing is undergoing rapid transformation as advances in artificial intelligence, heterogeneous computing, automation, and data-intensive research reshape not only computational tools but also the institutions, workforce models, and collaborative practices that support scientific discovery. This report synthesizes insights from the 2026 Workshop on Next-Generation Ecosystems for Scientific Computing, the second in a three-year series focused on strengthening scientific computing ecosystems through socio-technical co-design. Workshop discussions identified four interdependent strategic themes: software ecosystems for AI-enabled scientific discovery; trust, validation, and traceability; human-AI teaming and paradigm shifts; and workforce, pedagogy, and governance. The report translates these themes into eight priorities for community action spanning shared research infrastructure, trust and traceability, user experience, human-AI teaming, workforce development, cross-sector coordination, stewardship and sustainability, and evaluation of scientific value. Together, these priorities outline directions for building scientific computing ecosystems that remain trustworthy, sustainable, innovative, and resilient as AI assumes a growing role in scientific work.

AI↗
DOE OSTI2023

US Hydropower Potential at National Conduits

The US Hydropower Potential at National Conduits dataset provides the results of a national assessment of various conduit hydropower potential for the year 2022. Hydropower potential and generation estimates are provided for various types of municipal, agricultural, and industrial applications across all 50 states. A total of 1.41 gigawatts of hydropower potential is estimated across the US. This dataset provides conduit hydropower estimates summarized at state resolution in Shapefile (*.shp) format and at county resolution in comma separated (*.csv) and *.shp format.

13 HYDRO ENERGY↗
DOE OSTI2026

Engineered Membrane Vesicle Production via oprF or oprI Deletion Has Distinct Phenotypic Effects in Pseudomonas putida -putative knockouts table

Table S1, putative gene knockout targets in P. putida KT2440 to enhance vesiculation; Table S2, protein sequence identity of OmpA from E. coli K12 to P. putida KT2440 genes; Table S3, strains utilized in this study and corresponding construction details; Table S4, oligonucleotides utilized in this study; Table S5, plasmids utilized in this study; Table S6, sequences for mNeonGreen, tags, and codon-optimized genes; Figure S1, particle count per gCDW for KT2440 and knockout strains corresponding to data presented in Figure 1B; Figure S2, OD600 measurements of extracted MVs from KT2440 and knockout strains; Figure S3, particle count per gCDW for WT, ΔPP_4669, and ΔPP_1502; Figure S4, particle count per gCDW for KT2440 and knockout strains corresponding to data presented in Figure 3C; Figure S5, sizes of MVs corresponding to particle counts in Figure S4; Figure S6, particle count per gCDW for KT2440 grown on 20 mM glucose alone or 20 mM glucose plus 12.5 mM p-coumarate and 12.5 mM ferulate; Figure S7 and Figure S8, principal component analysis of the cellular fractions; Figure S9, heatmap of outer membrane proteins with differential abundance; and Figure S10, mNeonGreen (mNG) fluorescence signal for the cellular fraction and the extracellular fraction

hypervesiculation↗
DOE OSTI2026

Pseudomonas putida membrane vesicles

Cellular and membrane vesicle proteomes from Pseudomonas putida KT2440 and engineered derivative strains. Proteomic quantification by diDO-IPTL (Waldbauer et al. 2017 Analytical Chemistry).

hypervesiculation↗
DOE OSTI2024

Genome-scale model development and genomic sequencing of the oleaginous clade Lipomyces

The Lipomyces clade contains oleaginous yeast species with advantageous metabolic features for biochemical and biofuel production. Limited knowledge about the metabolic networks of the species and limited tools for genetic engineering have led to a relatively small amount of research on the microbes. Here, a genome-scale metabolic model (GSM) of Lipomyces starkeyi NRRL Y-11557 was built using orthologous protein mappings to model yeast species. Phenotypic growth assays were used to validate the GSM (66% accuracy) and indicated that NRRL Y-11557 utilized diverse carbohydrates but had more limited catabolism of organic acids. The final GSM contained 2,193 reactions, 1,909 metabolites, and 996 genes and was thus named iLst996. The model contained 96 of the annotated carbohydrate-active enzymes. iLst996 predicted a flux distribution in line with oleaginous yeast measurements and was utilized to predict theoretical lipid yields. Twenty-five other yeasts in the Lipomyces clade were then genome sequenced and annotated. Sixteen of the Lipomyces species had orthologs for more than 97% of the iLst996 genes, demonstrating the usefulness of iLst996 as a broad GSM for Lipomyces metabolism. Pathways that diverged from iLst996 mainly revolved around alternate carbon metabolism, with ortholog groups excluding NRRL Y-11557 annotated to be involved in transport, glycerolipid, and starch metabolism, among others. Overall, this study provides a useful modeling tool and data for analyzing and understanding Lipomyces species metabolism and will assist further engineering efforts in Lipomyces .

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2024

CRISPR-Cas9/Cas12a systems for efficient genome editing and large genomic fragment deletions in Aspergillus niger

CRISPR technology has revolutionized fungal genetic engineering by accelerating the pace and expanding the feasible scope of experiments in this field. Among various CRISPR-Cas systems, Cas9 and Cas12a are widely used in genetic and metabolic engineering. In filamentous fungi, both Cas9 and Cas12a have been utilized as CRISPR nucleases. In this work we first compared efficacies and types of genetic edits for CRISPR-Cas9 and -Cas12a systems at the polyketide synthase (albA) gene locus in Aspergillus niger. By employing a tRNA-based gRNA polycistronic cassette, both Cas9 and Cas12a have demonstrated equally remarkable editing efficacy. Cas12a showed potential superiority over Cas9 protein when one gRNA was used for targeting, achieving an editing efficiency of 86.5% compared to 31.7% for Cas9. Moreover, when employing two gRNAs for targeting, both systems achieved up to 100% editing efficiency for single gene editing. In addition, the CRISPR-Cas9 system has been reported to induce large genomic deletions in various species. However, its use for engineering large chromosomal segments deletions in filamentous fungi still requires optimization. Here, we engineered Cas9 and -Cas12a-induced large genomic fragment deletions by targeting various genomic regions of A. niger ranging from 3.5 kb to 40 kb. Our findings demonstrate that targeted engineering of large chromosomal segments can be achieved, with deletions of up to 69.1% efficiency. Furthermore, by targeting a secondary metabolite gene cluster, we show that fragments over 100 kb can be efficiently and specifically deleted using the CRISPR-Cas9 or -Cas12a system. Overall, in this paper, we present an efficient multi-gRNA genome editing system utilizing Cas9 or Cas12a that enables highly efficient targeted editing of genes and large chromosomal regions in A. niger.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2026

Prediction of non-intuitive metabolic targets with bayesian metabolic control analysis to improve 3-hydroxypropionic acid production in Aspergillus niger

Development of efficient bioconversion processes is limited by the ability to predictably improve metabolic flux. Here we deployed Bayesian Metabolic Control Analysis as a platform to integrate multi-omics data with metabolic modeling and evaluated its ability to predict genetic interventions that improve metabolic flux. Global Metabolomics and proteomics data was collected from 17 Aspergillus niger strains engineered to produce the platform biochemical 3-hydroxypropionic acid from which seven actional genetic interventions were predicted from significant flux control coefficients. Of the suggested genetic interventions, two were present within the intuitively designed strains used for training (malonic semialdehyde dehydrogenase and pyruvate carboxylase) while five predicted targets were present within non-intuitive areas of the metabolic network including 5-formyltetrahydrofolate deformylase and four mitochondrial enzymes, alcohol dehydrogenase, succinyl-CoA ligase, aspartate aminotransferase, and malate dehydrogenase. Six of the targets were validated in the highest performing 3-HP strain used for multi-omics data generation which contained a prior disruption of the highest scoring target malonic semialdehyde dehydrogenase. Predicted directional perturbation of five of the six tested targets significantly improved titer and rate of 3-HP production and two significantly improved yield. The greatest improvements were observed following disruption of the non-intuitive target succinyl-CoA ligase which increased titer by 39% and yield by 29% (to 20.4 g/L 3-HP and 0.31 g 3-HP/g glucose) over the strains used for training. This study demonstrates the utility of Bayesian Metabolic Control Analysis and highlights the ability to predict meaningful genetic targets in unexpected areas of metabolism to improve engineered strains for bioconversion.

3-hydroxypropionic acid↗
DOE OSTI2020

Supplemental Microalgal DHA and Astaxanthin Affect Astaxanthin Metabolism and Redox Status of Juvenile Rainbow Trout

Microalgal docosahexaenoic acid (DHA) and astaxanthin (AST) may substitute for fish oil and synthetic AST in aquafeeds. This study explored the effects and mechanisms of those substitutions on AST metabolism and redox status of rainbow trout fed plant protein meal (PM)- or fishmeal (FM)-based diets. Two parallel experiments (PM vs. FM) were performed with 612 juvenile rainbow trout for 16 weeks as a 2 × 3 factorial arrangement of treatments with two AST sources (synthetic (SA) vs. microalgal (AA), at 80 mg/kg) and three levels (0, 50, and 100%) of fish oil substitutions with DHA-rich microalgae. The fish oil substitutions exhibit main effects (p < 0.05) and/or interactive effects (p < 0.05) with the source of AST on AST deposition, malondialdehyde and glutathione concentrations, and mRNA levels and activities of major redox enzymes (glutathione reductase (GR), glutathione peroxidase (GPX), glutathione S-transferase (GST), and superoxide dismutase (SOD)) in the muscle and liver of trout fed both diet series. The AST source produced only differences in tissue AST deposition (p < 0.05) and number of metabolites. In conclusion, the substitutions of fish oil by the DHA-rich microalgae exerted more impacts than those of SA by AA on redox status and functional expression of antioxidant enzymes in the tissues of rainbow trout.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

Mean Flow from Phase Averages in the 2D Boussinesq Equations

The atmosphere and ocean are described by highly oscillatory PDEs that challenge both our understanding of their dynamics and their numerical approximation. This paper presents a preliminary numerical study of one type of phase averaging applied to mean flows in the 2D Boussinesq equations that also has application to numerical methods. The phase averaging technique, well-known in dynamical systems theory, relies on a mapping using the exponential operator, and then an averaging over the phase. The exponential operator has connections to the Craya–Herring basis pioneered by Jack Herring to study the fluid dynamics of oscillatory, nonlinear fluid dynamics. In this paper, we perform numerical experiments to study the effect of this averaging technique on the time evolution of the solution. We explore its potential as a definition for mean flows. We also show that, as expected from theory, the phase-averaging method can reduce the magnitude of the time rate of change in the PDEs, making them potentially suitable for time stepping methods.

Wingate, Beth A.↗
DOE OSTI2023

Genomic Features of Antimicrobial Resistance in Staphylococcus pseudintermedius Isolated from Dogs with Pyoderma in Argentina and the United States: A Comparative Study

Staphylococcus pseudintermedius is the most common opportunistic pathogen in dogs and methicillin resistance (MRSP) has been identified as an emerging problem in canine pyoderma. Here, we evaluated the antimicrobial resistance (AMR) features and phylogeny of S. pseudintermedius isolated from canine pyoderma cases in Argentina (n = 29) and the United States (n = 29). 62% of isolates showed multi-drug resistance. The AMR genes found: mecA, blaZ, ermB, dfrG, catA, tetM, aac(6')-aph(2"), in addition to tetK and lnuA (only found in U.S. isolates). Two point mutations were detected: grlA(S80I)-gyrA(S84L), and grlA(D84N)-gyrA(S84L) in one U.S. isolate. A mutation in rpoB (H481N) was found in two isolates from Argentina. SCCmec type III, SCCmec type V, ΨSCCmec 57395 were identified in the Argentinian isolates; and SCCmec type III, SCCmec type IVg, SCCmec type V, and SCCmec type VII variant in the U.S. cohort. Sequence type (ST) ST71 belonging to a dominant clone was found in isolates from both countries, and ST45 only in Argentinian isolates. This is the first study to comparatively analyze the population structure of canine pyoderma-associated S. pseudintermedius isolates in Argentina and in the U.S. It is important to maintain surveillance on S. pseudintermedius populations to monitor AMR and gain further understanding of its evolution and dissemination.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2024

Simple and Effective Squash-PCR for Rapid Genotyping of Industrial Microalgae

Microalgae are recognized for their versatility in providing renewable energy, biopharmaceuticals, and nutraceuticals, attributed to their sustainable, renewable, and cost-effective nature. Genetic engineering has proven highly effective in enhancing microalgae production. PCR-based genotyping is the primary method for screening genetically transformed microalgae cells. Recently, we developed a novel PCR method, namely Squash-PCR, and employed it for the molecular analysis of industrially important fungi and yeasts. In this study, we successfully implemented the Squash-PCR technique in 12 industrially significant algae species. This approach offers a quick and reliable means of obtaining DNA templates directly from squashed algal cells, eliminating the need for time-consuming and labor-intensive cultivation and genomic DNA extraction steps. Our results demonstrate the effectiveness of Squash-PCR in detecting and characterizing target genes of interest in 12 different algae species. Overall, this study establishes the Squash-PCR method as a valuable tool for molecular studies in algae, enabling researchers to rapidly screen and manipulate genetic traits in diverse algal species.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

Spitzer Variability Properties of Low-gravity L Dwarfs

We present Spitzer Space Telescope variability monitoring observations of three low-gravity L dwarfs with previous detections of variability in the near-IR: 2MASS J0045+16, 2MASS J0501–00, and 2MASS J1425–36. We detect significant periodic variability in two of our targets, 2MASS J0045+16 and 2MASS J0501–00. We do not detect variability in 2MASS J1425–36. Combining our new rotation periods with rotational velocities, we calculate inclination angles of 22° ± 1°, 60{sub -8}{sup +13°}, and 52{sub -13}{sup +19°} for 2MASS J0045+16, 2MASS J0501–00, and 2MASS J1425–36, respectively. Our three new objects are consistent with the tentative relations between inclination, amplitude, and color anomaly previously reported. Objects with the highest variability amplitudes are inclined equator on, while the maximum observed amplitude decreases as the inclination angle decreases. We also find a correlation between the inclination angle and (J–K){sub 2MASS} color anomaly for the sample of objects with measured inclinations. Compiling the entire sample of brown dwarfs with Spitzer variability detections, we find no enhancement in amplitude for young, early-L dwarfs compared to the field dwarf population. We find a possible enhancement in amplitude of low-gravity late-L dwarfs at 4.5 μm. We do not find a correlation between amplitude ratio and spectral type for field dwarfs or for the young population. Finally, we compile the rotation periods of a large sample of brown dwarfs with ages 1 Myr–1 Gyr and compare the rotation rates predicted by evolutionary models assuming angular momentum conservation. We find that the rotation rates of the current sample of brown dwarfs fall within the expected range set by evolutionary models and breakup limits.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2020

Atmospheric Temperature Inversions and He ι 5876 Core Profile Structure in White Dwarfs

Here we report distinctive core profiles in the strongest optical helium line, He ι λ5876, from high-resolution high-sensitivity observations of spectral type DB white dwarfs. By analyzing a sample of 40 stars from Keck/HIRES and VLT/UVES, we find the core appearance to be related to the degree of hydrogen and heavy element content in the atmosphere. New Ca K-line measurements or upper limits are reported for about half the sample stars. He ι λ5876 emission cores with a self-reversed central component are present for those stars with relatively low hydrogen abundance, as well as relatively low atmospheric heavy element pollution. This self-reversed structure disappears for stars with higher degrees of pollution and/or hydrogen abundance, giving way to a single absorption core. From our model atmospheres, we show that the self-reversed emission cores can be explained by temperature inversions in the upper atmosphere. We propose that the transition to a single absorption core is due to the additional opacity from hydrogen and heavy elements that inhibits the temperature inversions. Our current models do not exactly match the effective temperature range of the phenomenon or the amplitude of the self-reversed structure, which is possibly a result of missing physics such as 3D treatment, convective overshoot, and/or non-LTE effects. The He ι λ5876 line structure may prove to be a useful new diagnostic for calibrating temperature profiles in DB atmosphere models.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2021

Eridanus II: A Fossil from Reionization with an Off-center Star Cluster

In this work, we present deep Hubble Space Telescope (HST) photometry of the ultra-faint dwarf galaxy Eridanus II (Eri II). Eri II, which has an absolute magnitude of M V = -7.1, is located at a distance of 339 kpc, just beyond the virial radius of the Milky Way. We determine the star formation history of Eri II and measure the structure of the galaxy and its star cluster. We find that a star formation history consisting of two bursts, constrained to match the spectroscopic metallicity distribution of the galaxy, accurately describes the Eri II stellar population. The best-fit model implies a rapid truncation of star formation at early times, with >80% of the stellar mass in place before z ~ 6. A small fraction of the stars could be as young as 8 Gyr, but this population is not statistically significant; Monte Carlo simulations recover a component younger than 9 Gyr only 15% of the time, where they represent an average of 7 ± 4% of the population. These results are consistent with theoretical expectations for quenching by reionization. The HST depth and angular resolution enable us to show that Eri II’s cluster is offset from the center of the galaxy by a projected distance of 23 ± 3 pc. This offset could be an indication of a small (~50–75 pc) dark matter core in Eri II. Moreover, we demonstrate that the cluster has a high ellipticity of and is aligned with the orientation of Eri II within 3° ± 6°, likely due to tides. The stellar population of the cluster is indistinguishable from that of Eri II itself.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2021

Discovery of Beryllium in White Dwarfs Polluted by Planetesimal Accretion

The element beryllium is detected for the first time in white dwarf stars. This discovery in the spectra of two helium-atmosphere white dwarfs was made possible only because of the remarkable overabundance of Be relative to all other elements, heavier than He, observed in these stars. The measured Be abundances, relative to chondritic, are by far the largest ever seen in any astronomical object. We anticipate that the Be in these accreted planetary bodies was produced by spallation of one or more of O, C, and N in a region of high fluence of particles of MeV or greater energy.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2021

Recurring Planetary Debris Transits and Circumstellar Gas around White Dwarf ZTF J0328–1219

We present follow-up photometry and spectroscopy of ZTF J0328-1219, strengthening its status as a white dwarf exhibiting transiting planetary debris. Using TESS and Zwicky Transient Facility photometry, along with follow-up high-speed photometry from various observatories, we find evidence for two significant periods of variability at 9.937 and 11.2 hr. We interpret these as most likely the orbital periods of different debris clumps. Changes in the detailed dip structures within the light curves are observed on nightly, weekly, and monthly timescales, reminiscent of the dynamic behavior observed in the first white dwarf discovered to harbor a disintegrating asteroid, WD 1145+017. We fit previously published spectroscopy along with broadband photometry to obtain new atmospheric parameters for the white dwarf, with M * = 0.731 ± 0.023 M⊙, T eff = 7630 ± 140 K, and [Ca/He] = - 9.55 ± 0.12. With new high-resolution spectroscopy, we detect prominent and narrow Na D absorption features likely of circumstellar origin, with velocities 21.4 ± 1.0 km s -1 blueshifted relative to atmospheric lines. We attribute the periodically modulated photometric signal to dusty effluents from small orbiting bodies such as asteroids or comets, but we are unable to identify the most likely material that is being sublimated, or otherwise ejected, as the environmental temperatures range from roughly 400 to 700 K.

79 ASTRONOMY AND ASTROPHYSICS↗