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At least 19 records

Plant Science in Reduced Gravity: Lessons Learned

The effect of gravity on the growth and development of plants has been the subject of scientific investigation for over a century. The results obtained in space to test specific hypotheses on gravitropism, gene expression, seed formation, or growth rate are affected by both the primary effect of the microgravity and secondary effects of the spaceflight environment. The secondary effects of the spaceflight environment include physical effects arising from physical changes, such as the absence of buoyancy driven convective mixing, altered behavior of liquids and gases, and the environmental conditions in the spacecraft atmosphere. Thus, the design of biological experiments (e.g. cells, plants, animals, etc.) conducted in microgravity must account for changes in the physical forces, as well as the environmental conditions, imposed by the specific spaceflight vehicle and experimental hardware. In addition, researchers must become familiar with other aspects of spaceflight experiments: payload integration with hardware developers, safety documentation and crew procedures, and the logistics of conducting flight and ground controls. This report reviews the physical and environmental factors that directly and indirectly affect the results of plant science experiments in microgravity and is intended to serve as a guide in the design and implementation plant experiments in space.

Stutte, Gary W.↗

Application of scanning microdensitometer data in selected plant science case studies

This paper treats a representative sample of projects aimed at vegetation mapping and assessment via analysis of both digital photographic and Landsat data projects and illustrates the potential for using scanning microdensitometric data extracted from color infrared photographs in the following applications: freshwater wetlands mapping, tree type mapping, and yield vs. reflectance modeling in corn fertilization experiments. These case studies are presented to illustrate the general applicability of scanning microdensitometer data in the contexts of image classification and enhancement as well as quantitative modeling of ground parameters.

Lillesand, T. M.↗

Global climate change and US agriculture

Agricultural productivity is expected to be sensitive to global climate change. Models from atmospheric science, plant science, and agricultural economics are linked to explore this sensitivity. Although the results depend on the severity of climate change and the compensating effects of carbon dioxide on crop yields, the simulation suggests that irrigated acreage will expand and regional patterns of U.S. agriculture will shift. The impact of the U.S. economy strongly depends on which climate model is used.

Adams, Richard M.↗

Open Science for Plants in Space: Improvements in NASA's Open Science Data Repository

Upcoming deep space missions will rely on plants for crew and ecosystem health. Open access space biology data enables scientists to examine the biological responses of plants to ionizing radiation, altered gravity, elevated CO2, and many other abiotic stressors. NASA has declared 2023 as the ‘Year of Open Science’ and created a 5-year Transform to Open Science (TOPS) initiative designed to rapidly transform the agency toward an inclusive culture of open science. NASA’s Open Science Data Repository (OSDR) combines two databases, GeneLab and Ames Life Sciences Data Archive (ALSDA) to maximize access to standardized ‘omics (e.g., transcriptomics, proteomics) and phenotypic data (e.g., microscopy, biomass), respectively. Current OSDR standards include the ISA (Investigation-Study-Assay) experiment model, assay metadata configurations, and standardized terminology and ontologies. In 2024 OSDR will include a new suite of features for improved FAIR compliance including downloadable plant metadata templates, data submission tools and overall improved AI-readiness of plant datasets. AI/ML methods can be helpful tools to overcome the inherent challenges of space biology research (small sample size, sparse and heterogeneous data etc.). However these methods are built on an assumption of normalized and well-curated data. OSDR’s new curation tools will improve users ability to leverage ML and AI methods to model space biology data and better understand the complex effects of spaceflight on living systems across hierarchical biological levels. We look forward to sharing our advances with the spaceflight community.

FAIR↗

Open Science for Plants in Space: Data Sharing, Standards, and Informatics for Reuse and Knowledge Discovery

Upcoming deep space missions will rely on plants for crew and ecosystem health. Open access space biology data enables scientists to examine the biological responses of plants to ionizing radiation, altered gravity, low atmospheric pressure, elevated CO2, altered photoperiods and many other abiotic stressors. Open Science is the practice of making research available to all, while respecting diverse cultures, and fostering collaborations with equity. 2023 is the ‘Year of Open Science’, and NASA has a 5-year Transform to Open Science (TOPS) initiative designed to rapidly transform the agency toward an inclusive culture of open science. NASA’s Open Science Data Repository (OSDR) within NASA’s Biological and Physical Sciences Division provides access to data from space-relevant biological experiments. OSDR combines two databases, GeneLab and Ames Life Sciences Data Archive (ALSDA) to maximize access to standardized ‘omics (e.g., transcriptomics, proteomics) and phenotypic data (e.g., microscopy, biomass), respectively. GeneLab started in 2014 with the creation of the first space-relevant FAIR (Findable, Accessible, Interoperable, Reusable) biological ‘omics repository, providing detailed metadata on investigation, sample, and assay levels. The addition of ALSDA to OSDR expands plant data analysis capabilities across both phenotypic and ‘omics data. Today, OSDR hosts 62+ plant datasets and has enabled 58 peer-reviewed publications. Most of these publications were collaboration efforts under the OSDR Analysis Working Groups (AWGs). AWGs provide great opportunities for investigators to collaborate and set new standards for space-relevant data and metadata. The AWGs welcome any ASPB members interested in contributing plant expertise for space biology, and to serve as subject matter experts as we establish the framework for modern plant data archiving. Investigators are invited to submit their space-relevant plant datasets to OSDR and visit the site to learn about the tools OSDR has to offer (osdr.nasa.gov/bio).

FAIR↗

Open Science for Plants in Space: Data Sharing, Standards, and Informatics for Reuse and Knowledge Discovery

Upcoming deep space missions rely on plants and crops for crew and ecosystem health. Access to space plant data enables scientists to gain a deeper understanding of biological responses to ionizing radiation, altered gravity, low atmospheric pressure, elevated CO2, and altered photoperiods. Open Science is the practice of making research available to all, while respecting diverse cultures, fostering collaborations with equity. 2023 is the ‘Year of Open Science’, and NASA has a 5-year Transform to Open Science (TOPS) mission designed to rapidly transform the agency toward an inclusive culture of open science. NASA’s Open Science Data Repository (OSDR) developed by NASA’s Biological and Physical Sciences Division provides access to data from space-relevant biological experiments. OSDR combines two databases, GeneLab and Ames Life Sciences Data Archive (ALSDA) to maximize access to standardized ‘omics (e.g., transcriptomics, proteomics) and phenotypic data (e.g., microscopy, biomass), respectively. OSDR started in 2014 with the creation of the first space-relevant FAIR (Findable, Accessible, Interoperable, Reusable) biological ‘omics repository (GeneLab), providing detailed metadata on investigation, sample, and assay levels. Today, GeneLab hosts 62 plant datasets which have led to 5 published peer-reviewed meta-analysis publications. Most of these publications were collaboration efforts under the OSDR Analysis Working Groups (AWGs). AWGs provide great opportunities for investigators to collaborate and set new standards for space-relevant data and metadata. The AWGs are welcoming any ASPB members interested in providing plant expertise for space biology. The addition of ALSDA to OSDR is also expanding analysis capability beyond ‘omics. Now is the time to get involved as a Subject Matter Expert as we establish the framework for modern plant data archiving through the AWGs. Investigators are invited to submit their space-relevant plant datasets to OSDR and visit the site to learn about the tools OSDR has to offer (osdr.nasa.gov/bio).

FAIR↗

Progress Towards an Interdisciplinary Science of Plant Phenology: Building Predictions Across Space, Time and Species Diversity

Climate change has brought renewed interest in the study of plant phenology - the timing of life history events. Data on shifting phenologies with warming have accumulated rapidly, yet research has been comparatively slow to explain the diversity of phenological responses observed across latitudes, growing seasons and species. Here, we outline recent efforts to synthesize perspectives on plant phenology across the fields of ecology, climate science and evolution. We highlight three major axes that vary among these disciplines: relative focus on abiotic versus biotic drivers of phenology, on plastic versus genetic drivers of intraspecific variation, and on cross-species versus autecological approaches. Recent interdisciplinary efforts, building on data covering diverse species and climate space, have found a greater role of temperature in controlling phenology at higher latitudes and for early-flowering species in temperate systems. These efforts have also made progress in understanding the tremendous diversity of responses across species by incorporating evolutionary relatedness, and linking phenological flexibility to invasions and plant performance. Future research with a focus on data collection in areas outside the temperate mid-latitudes and across species' ranges, alongside better integration of how risk and investment shape plant phenology, offers promise for further progress.

phenology↗

Open Science for Plants in Space: Data Sharing, Standards, and Informatics for Reuse and Knowledge Discovery

Upcoming deep space missions will rely on plants for crew and ecosystem health. Open access space biology data enables scientists to examine the biological responses of plants to ionizing radiation, altered gravity, low atmospheric pressure, elevated CO2, altered photoperiods and many other abiotic stressors. Open Science is the practice of making research available to all, while respecting diverse cultures, to foster collaborations with equity. NASA has declared 2023 as the ‘Year of Open Science’ and created a 5-year Transform to Open Science (TOPS) initiative designed to rapidly transform the agency toward an inclusive culture of open science. NASA’s Open Science Data Repository (OSDR) within the Biological and Physical Sciences Division provides access to data from space-relevant biological experiments. OSDR combines two databases, GeneLab and Ames Life Sciences Data Archive (ALSDA) to maximize access to standardized ‘omics (e.g., transcriptomics, proteomics) and phenotypic data (e.g., microscopy, biomass), respectively. GeneLab started in 2014 with the creation of the first space-relevant FAIR (Findable, Accessible, Interoperable, Reusable) biological ‘omics repository, providing detailed metadata on investigation, sample, and assay levels. The addition of ALSDA to OSDR expands plant data analysis capabilities across both phenotypic and ‘omics data. Today, OSDR hosts 62+ plant datasets and has enabled 58 peer-reviewed publications. Most of these publications were collaboration efforts under the OSDR Analysis Working Groups (AWGs). AWGs provide great opportunities for investigators to collaborate with community members and set new standards for space-relevant data and metadata. The AWGs welcome any ASGSR members interested in contributing plant expertise for space biology, and to serve as subject matter experts as we establish the framework for modern plant data archiving. Investigators are encouraged to submit their space-relevant plant datasets to OSDR and visit the site to learn about the tools OSDR has to offer (osdr.nasa.gov/bio).

FAIR↗

Using Science Skills to Understand Ecophysiology and Manage Resources

Presentation will be for a general audience and focus on plant science and ecosystem science in NASA. Examples from the projects involving the presenter will be used to illustrate. Specifically, the California Sacramento-San Joaquin River Delta project. This collaboration supports the goals of the Delta Plan in developing science-based, adaptive-management strategies. The mission is to improve reliability of water supply and restore a healthy Delta ecosystem while enhancing agriculture and recreation. NASA can contribute gap-filling science understanding of overall functions in the Delta ecosystem and assess and help develop management plans for specific issues. Airborne and satellite remote-sensing, ecosystem modeling, and biological studies provide underlying data needed by Delta stakeholders to assess and address water, ecosystem restoration, and environmental and economic impacts of potential actions in the Delta. The California Sacramento-San Joaquin River Delta, the hub for California's water supply, supports important ecosystem services for fisheries, supplies drinking water for millions, and distributes water from Northern California to agriculture and urban communities to the south; millions of people and businesses depend on Delta water. Decades of competing demands for Delta resources and year-to-year variability in precipitation has resulted in diminished overall health of the Delta. Declines in fish populations, threatened ecosystems, endangered species, invasive plants and animals, cuts in agricultural exports, and increased water conservation is the result. NASA and the USDA, building on previous collaborations, aide local Delta stakeholders in assessing and developing an invasive weed management approach. Aquatic, terrestrial, and riparian invasive weeds threaten aquatic and terrestrial ecosystem restoration efforts. Aquatic weeds are currently detrimental economically, environmentally, and sociologically in the Delta. They negatively impact the redistribution of water and disrupt the ecology of the Bay Delta food web. Filling current science gaps in the Delta Plan and improving management practices within the Delta are important to achieving the mission of improved Delta health. Methods developed can become routine land and water management tools. New high-resolution NASA sensor systems could be used to provide data packages specifically designed for water system The presenter will also speak about his personal experience and the role Delaware Valley College played in preparation for a professional career science.

Water↗

Lessons Learned From Plant Research in Low Earth Orbit

This presentation is part of the pre-ASGSR workshop that will be held in Houston, Texas on November 9, 2022. The overall objective of the workshop is to discuss conducting biology experiments beyond low Earth orbit (LEO) and present the challenges and the paths forward. In part, the workshop will highlight lessons learned in plant space biology, some of the plant spaceflight stressors that are anticipated to cause biological changes beyond LEO and discuss what is currently known about these changes, and how results can be leveraged for future missions to the Moon and Mars. Platforms that can be utilized to conduct plant science experiments beyond LEO will also be discussed.

Plant Space Biology↗

NASA-HBCU Space Science and Engineering Research Forum Proceedings

The proceedings of the Historically Black Colleges and Universities (HBCU) forum are presented. A wide range of research topics from plant science to space science and related academic areas was covered. The sessions were divided into the following subject areas: Life science; Mathematical modeling, image processing, pattern recognition, and algorithms; Microgravity processing, space utilization and application; Physical science and chemistry; Research and training programs; Space science (astronomy, planetary science, asteroids, moon); Space technology (engineering, structures and systems for application in space); Space technology (physics of materials and systems for space applications); and Technology (materials, techniques, measurements).

Sanders, Yvonne D.↗

The Forgetful Professor and the Space Biology Adventure

This video was created as one of the products of the 2013 ISS Faculty Fellows Summer Program. Our High School science teacher faculty fellows developed this video as an elementary/middle school education component. The video shows a forgetful professor who is trying to remember something, and along the journey she learns more about the space station, space station related plant science, and the Kennedy Space Center. She learns about the Veggie hardware, LED lighting for plant growth, the rotating garden concept, and generally about space exploration and the space station. Lastly she learns about the space shuttle Atlantis.

Massa, Gioia D.↗

Plant Water Management in Microgravity

The NASA Plant Water Management (PWM) technology demonstrations aboard ISS apply recent advances in microgravity capillary fluidics research towards the mundane yet problematic challenges of simply watering plants in space. Plant growth in a low-g environment is often hampered by inadequate aeration and over-saturation of the root zone. The present effort aims to exploit the passive capillary forces of poorly wetting liquids (i.e., contaminated water) within unique system geometries that effectively replace the role of gravity in providing sufficient aeration and hydration for simulated plants. Several flight demonstrations have been completed on ISS, including soil and hydroponic models in single and parallel channel networks. Two future demonstrations are still in work and plan to further develop the system to handle sustained plant growth with additional sensors to monitor the growth environment. The results to date demonstrate proof-of-concept, system stability, limits of operation, and more, for simulated plant models. Eventually, real plants will be incorporated into these systems and tested on orbit. The implications are discussed in relation to plant growth facilities for further near-term microgravity plant science research as well as for automated food production for long duration human exploration missions.

microgravity↗

CELSS Program Meeting

A meeting on the potential contributions of plant science to the goals of Controlled Ecological Life Support System (CELSS) research produced discussions that helped to focus on a variety of topics. In the area of volatiles and soluble organics, microbial activity, disease, and productivity, participants emphasized the need to know more about the consequences of closure for the growth of plants. Under nutrient delivery systems, the problems focus on the need to maintain a stable, optimum nutrient system. Lighting systems discussions emphasized unique methods of direct lighting and development of improved irradiation sources. Flight experiment opportunities were outlined by one speaker. Documentation of the Plant Growth Module was discussed. The last day's discussion focused on the organization of the research group to be involved in the development and use of a two to three cubic meter sealed chamber and ancillary equipment.

Tremor, John W.↗

Using Satellite Remote Sensing to Map Changes in Aquatic Invasive Plant Cover in the Sacramento-San Joaquin River Delta of California

Waterways of the Sacramento San Joaquin Delta have recently become infested with invasive aquatic weeds such as floating water hyacinth (Eichhoria crassipes) and water primrose (Ludwigia peploides). These invasive plants cause many negative impacts, including, but not limited to: the blocking of waterways for commercial shipping and boating; clogging of irrigation screens, pumps and canals; and degradation of biological habitat through shading. Zhang et al. (1997, Ecological Applications, 7(3), 1039-1053) used NASA Landsat satellite imagery together with field calibration measurements to map physical and biological processes within marshlands of the San Francisco Bay. Live green biomass (LGB) and related variables were correlated with a simple vegetation index ratio of red and near infra-red bands from Landsat images. More recently, the percent (water area) cover of water hyacinth plotted against estimated LGB of emergent aquatic vegetation in the Delta from September 2014 Landsat imagery showed a 80% overall accuracy. For the past two years, we have partnered with the U. S. Department of Agriculture (USDA) and the Department of Plant Sciences, University of California at Davis to conduct new validation surveys of water hyacinth and water primrose coverage and LGB in Delta waterways. A plan is underway to transfer decision support tools developed at NASA's Ames Research Center based on Landsat satellite images to improve Delta-wide integrated management of floating aquatic weeds, while reducing chemical control costs. The main end-user for this application project will be the Division of Boating and Waterways (DBW) of the California Department of Parks and Recreation, who has the responsibility for chemical control of water hyacinth in the Delta.

Map Changes↗

Analysis of Satellite and Airborne Imagery for Detection of Water Hyacinth and Other Invasive Floating Macrophytes and Tracking of Aquatic Weed Control Efficacy

Waterways of the Sacramento San Joaquin Delta have recently become infested with invasive aquatic weeds such as floating water hyacinth (Eichhoria crassipes) and water primrose (Ludwigia peploides). These invasive plants cause many negative impacts, including, but not limited to: the blocking of waterways for commercial shipping and boating; clogging of irrigation screens, pumps and canals; and degradation of biological habitat through shading. Zhang et al. (1997, Ecological Applications, 7(3), 1039-1053) used NASA Landsat satellite imagery together with field calibration measurements to map physical and biological processes within marshlands of the San Francisco Bay. Live green biomass (LGB) and related variables were correlated with a simple vegetation index ratio of red and near infra-red bands from Landsat images. More recently, the percent (water area) cover of water hyacinth plotted against estimated LGB of emergent aquatic vegetation in the Delta from September 2014 Landsat imagery showed an 80 percent overall accuracy. For the past two years, we have partnered with the U. S. Department of Agriculture (USDA) and the Department of Plant Sciences, University of California at Davis to conduct new validation surveys of water hyacinth and water primrose coverage and LGB in Delta waterways. A plan is underway to transfer decision support tools developed at NASA's Ames Research Center based on Landsat satellite images to improve Delta-wide integrated management of floating aquatic weeds, while reducing chemical control costs. The main end-user for this application project will be the Division of Boating and Waterways (DBW) of the California Department of Parks and Recreation, who has the responsibility for chemical control of water hyacinth in the Delta.

Agriculture↗