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Computer modeling of the neurotoxin binding site of acetylcholine receptor spanning residues 185 through 196

A model of the complex between the acetylcholine receptor and the snake neurotoxin, cobratoxin, was built by molecular model building and energy optimization techniques. The experimentally identified functionally important residues of cobratoxin and the dodecapeptide corresponding to the residues 185-196 of acetylcholine receptor alpha subunit were used to build the model. Both cis and trans conformers of cyclic L-cystine portion of the dodecapeptide were examined. Binding residues independently identified on cobratoxin are shown to interact with the dodecapeptide AChR model.

NASA Discipline Exobiology↗

The effect of altered 5-hydroxytryptamine levels on beta-endorphin

The purpose of the present study was to examine the effect of altering the concentration of 5-hydroxytryptamine (5-HT) on beta-endorphin (beta-Ep) content in the hypothalamus, thalamus, and periaqueductal gray (PAG)-rostral pons regions of the rat brain. The selective 5-HT reuptake inhibitor, fluoxetine (10 mg/kg), significantly lowered beta-Ep content in the hypothalamus and the PAG. Parachlorophenylalanine, which inhibits 5-HT synthesis, significantly elevated beta-Ep in all brain parts studied. Intracisternal injections of the neurotoxin 5-prime, 7-prime-dihydroxytryptamine with desmethylimipramine pretreatment significantly increased beta-Ep content in the hypothalamus and the PAG. In adrenalectomized rats, fluoxetine significantly decreased beta-Ep levels in the hypothalamus and increased the levels in the PAG. The results indicate that 5-HT may modulate the levels of brain beta-Ep.

Soliman, Karam F. A.↗

Multistep modeling of protein structure: application to bungarotoxin

Modelling of bungarotoxin in atomic details is presented in this article. The model-building procedure utilizes the low-resolution crystal coordinates of the c-alpha atoms of bungarotoxin, sequence homology within the neurotoxin family, as well as high-resolution x-ray diffraction data of cobratoxin and erabutoxin. Our model-building procedure involves: (a) principles of comparative modelling, (b) embedding procedures of distance geometry, and (c) use of molecular mechanics for optimizing packing. The model is not only consistent with the c-alpha coordinates of crystal structure, but also agrees with solution conformational features of the triple-stranded beta sheet as observed by NOE measurements.

NASA Discipline Exobiology↗

Narragansett Bay Water Resources: Using Earth Observations to Identify Trends in Harmful Algal Blooms in Narragansett Bay

Narragansett Bay in Rhode Island is known for its quahog, or hard-shell clam, shellfisheries. However, increased levels in harmful algal blooms (HABs) and high phytoplankton biomass events pose threats to quahog populations, creating conditions that limit quahog growth and reproduction. Quahog shortages, along with public health concerns associated with contamination of shellfish from HAB-produced neurotoxins, have contributed to shellfishery closures. NASA DEVELOP partnered with the Environmental Protection Agency’s National Health and Environmental Effects Research Laboratory and Rhode Island’s Department of Environmental Management to use Earth observations and the partners’ in-situ data to visualize phytoplankton bloom events within the bay. We used Sentinel-3 Ocean and Land Color Instrument (OLCI), Landsat 8 and 9 Operational Land Imager (OLI)data to track several proxies of phytoplankton biomass from June 2016 to October 2023. Multiple sensors and in situ datasets were used to assess the feasibility of monitoring phytoplankton biomass accurately in the relatively small sized Narragansett Bay. We determined that Phytoplankton fluorescence line height was the best parameter to monitor phytoplankton biomass in the bay. Although the relatively small size of the bay and the optical complexity of these nearshore waters can pose a challenge, this assessment showed that Earth observations can be a useful complement to the in-situ monitoring of phytoplankton biomass in Narragansett Bay.

Sentinel-3↗

Using NASA Earth Observations to Identify Trends in Harmful Algal Blooms in Narragansett Bay

Narragansett Bay in Rhode Island is known for its quahog, or hard-shell clam, shellfisheries. However, increased levels in harmful algal blooms (HABs) have posed threats to quahog populations and raised public health concerns due to shellfishery closures resulting from contamination with neurotoxins released by phytoplankton. NASA DEVELOP partnered with the Environmental Protection Agency’s National Health and Environmental Effects Research Laboratory and Rhode Island’s Department of Environmental Management to use Earth observations and the partners’ in-situ data to visualize phytoplankton bloom events within the bay. The team used Sentinel-3 Ocean and Land Color Instrument (OLCI), Landsat 8 Operational Land Imager (OLI), and Landsat 9 OLI-2 to track proposed proxies for phytoplankton from June 2016 to October 2023. Multiple sensors and datasets were employed for more accurate results due to the small spatial extent of Narragansett Bay. Chlorophyll-a and total suspended solids were determined to be accurate parameters to monitor HAB events. Although complications could arise due to the relatively small size of the bay and small-scale of the bloom events, which may be difficult to visualize via remote sensing, Earth observations have proven to help strengthen HAB research, monitoring, and prediction and will complement the extensive in-situ data in Narragansett Bay.

Isabella Giordano↗