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Data Assimilation Into a Coupled Ocean Atmosphere Model: Application to the 1997-1998 El Nino

As part of JPL's ocean data assimilation effort to study ocean circulation and seasonal-interannual climate variability, sea level anomaly observed by TOPEX altimeter, together with sea surface temperature and wind stress data, are assimilated into a simple coupled ocean atmosphere model of the tropical Pacific. Model-data consistency is examined. Impact of the assimilation (as initialization) on El Nino Southern Oscillation (ENSO) forecasts is evaluated. The coupled model consists of a shallow water component with two baroclinic modes, an Ekman shear layer, a simplified mixed-layer temperature equation, and a statistical atmosphere based on dominant correlations between historical surface temperature and wind stress anomaly data. The adjoins method is used to fit the coupled model to the data over various six-month periods from late 1996 to early 1998 by optimally adjusting the initial state, model parameters, and basis functions of the statistical atmosphere. On average, the coupled model can be fitted to the data to approximately within the data and representation errors (5 cm, 0.5 C, and 10 sq m/sq m for sea level, surface temperature, and pseudo wind stress anomalies, respectively). The estimated fields resemble observed spatio-temporal structure reasonably well. Hindcasts/forecasts of the 1997/1998 El Nino initialized from forced estimated ocean states and parameters are much more realistic than those simply initialized from ocean states (see figure below). In particular, the ability of the model to produce significant warming beyond the initial state is dramatically improved. Parameter estimation, which compensates for some model errors, is found to be important to obtaining better fits of the model to data and to improving forecasts.

Lee, Tong

Radiative Losses in the Chromosphere During A C-Class Flare

Context. Solar flares release an enormous amount of energy (~10(exp 32) erg) into the corona. A substantial fraction of this energy is transported to the lower atmosphere, which results in chromospheric heating. The mechanisms that transport energy to the lower solar atmosphere during a flare are still not fully understood. Aims. We aim to estimate the temporal evolution of the radiative losses in the chromosphere at the footpoints of a C-class flare, in order to set observational constraints on the electron beam parameters of a RADYN flare simulation. Methods. We estimated the radiative losses from hydrogen, and singly ionized Ca and Mg using semiempirical model atmospheres, which were inferred from a multiline inversion of observed Stokes profiles obtained with the CRISP and CHROMIS instruments on the Swedish 1-m Solar Telescope. The radiative losses were computed taking into account the effect of partial redistribution and non-local thermodynamic equilibrium. To estimate the integrated radiative losses in the chromosphere, the net cooling rates were integrated between the temperature minimum and the height where the temperature reaches 10 kK. We also compared our time series of radiative losses with those from the RADYN flare simulations. Results. We obtained a high spatial-resolution map of integrated radiative losses around the flare peak time. The stratification of the net cooling rate suggests that the Ca IR triplet lines are responsible for most of the radiative losses in the flaring atmosphere. During the flare peak time, the contribution from Ca II H and K and Mgii h and k lines are strong and comparable to the Ca IR triplet (~32kW m(exp -2)). Since our flare is a relatively weak event, the chromosphere is not heated above 11 kK, which in turn yields a subdued Lyα contribution (~7kW m(exp -2)) in the selected limits of the chromosphere. The temporal evolution of total integrated radiative losses exhibits sharply rising losses (0.4kW m(exp -2) (s(exp -1)) and a relatively slow decay (0.23kW m(exp -2) s(exp -1)). The maximum value of total radiative losses is reached around the flare peak time and can go up to 175kWm􀀀2 for a single pixel located at footpoint. After a small parameter study, we find the best model-data consistency in terms of the amplitude of radiative losses and the overall atmospheric structure with a RADYN flare simulation in the injected energy flux of 5 × 10(exp 10) erg s(exp -1) cm(exp -2).

Chromosphere

Scientific machine learning for closure models in multiscale problems: A review

Here, closure problems are omnipresent when simulating multiscale systems, where some quantities and processes cannot be fully prescribed despite their effects on the simulation's accuracy. Recently, scientific machine learning approaches have been proposed as a way to tackle the closure problem, combining traditional (physics-based) modeling with data-driven (machine-learned) techniques, typically through enriching differential equations with neural networks. This paper reviews the different reduced model forms, distinguished by the degree to which they include known physics, and the different objectives of a priori and a posteriori learning. The importance of adhering to physical laws (such as symmetries and conservation laws) in choosing the reduced model form and choosing the learning method is discussed. The effect of spatial and temporal discretization and recent trends toward discretization-invariant models are reviewed. In addition, we make the connections between closure problems and several other research disciplines: inverse problems, Mori-Zwanzig theory, and multi-fidelity methods. In conclusion, much progress has been made with scientific machine learning approaches for solving closure problems, but many challenges remain. In particular, the generalizability and interpretability of learned models is a major issue that needs to be addressed further.

97 MATHEMATICS AND COMPUTING

Mars Atmospheric Chemistry Simulations with the GEM-Mars General Circulation Model

General Circulation Models with interactive physical and chemistry processes are the state-of-the-art tools for an integrated view and understanding of the Martian atmosphere and climate system. The GEM-Mars model currently includes 16 tracers for chemical composition and applies a fully online, interactive calculation of the photo- and gas phase chemistry of carbon dioxide (CO2) and water vapor (H2O). These species largely control the chemical composition of the neutral Mars atmosphere through their photolysis products and their subsequent interactions. Water vapor undergoes a complex cycle on Mars as it is transported and interacts with ice reservoirs both at the planet's surface and at water ice clouds, which in turn provide radiative feedbacks. In the photochemical cycles involving CO2 and H2O, the abundances of 5 species have been reported by previous investigations with significant spatio-temporal coverage: CO2, H2O, CO, O3 and H2O2. This paper presents the current status of the atmospheric chemistry simulations in GEM-Mars by comparing them to a selection of these observational datasets as well as to oxygen dayglow emission from O2(a1∆g). The results are consistent with previous model-data comparisons and illustrate that the water cycle and the photochemistry are well implemented in the model. In particular, the simulation of the key reservoir species H2O2 provides a good match to the available data. Model-data biases for ozone columns and oxygen airglow are related to the simulated water vapor vertical profile, as these species have important column contributions from vertical layers at the top of the hygropause.

F Daerden

Hemispheric Asymmetry of the Annual and Semiannual Variation of Thermospheric Composition

We examine hemispheric asymmetry of the annual and semiannual variation of the ratio of O and N 2 concentrations ( O/N 2 ) using observations by the Global Ultraviolet Imager (GUVI) instrument onboard the Thermosphere Ionosphere Mesosphere Energetics and Dynamics satellite and compare them with Whole Atmosphere Community Climate Model with thermosphere-ionosphere eXtension (WACCM-X) model simulations. We found that in the equatorial region, the “equinox peaks” of the observed O/N 2 are near the end of March and October, and the two annual lows are near the beginning of July and January. Compared to the equatorial region, in the northern hemisphere (NH) low latitudes, the first “equinox peak” clearly shifts toward the December solstice, whereas in the southern hemisphere (SH) low latitudes, the “equinox peaks” shift toward the June solstice (JS), forming the hemispheric asymmetry characteristics of the annual and semiannual variation. Seasonal variation of O/N 2 shows no apparent phase variation with altitude, and the annual and semiannual pattern is consistent from year to year. WACCM-X reproduces the observed annual and semiannual pattern in NH but in SH, it simulates an annual variation instead of the observed annual and semiannual variation. The largest discrepancy occurs near JS in the lower and middle thermosphere: the simulated O density has an annual high near JS in SH; the simulated N 2 density has an annual high near JS in NH but a predominant annual low near JS in SH. These are not in the GUVI data. A weaker thermospheric meridional circulation in the winter hemisphere, or a reduced summer-to-winter latitudinal gradient of neutral temperature in WACCM-X simulations would make model-data comparisons more consistent.

thermosphere composition

Stormtime Ring Current Heating of the Ionosphere and Plasmasphere

The energy deposition from ring current ions into the high density “cold” plasma of the ionosphere and plasmasphere is analyzed, based on a Comprehensive Inner Magnetosphere-Ionosphere simulation of the 2015 October 7 storm. In addition, the Naval Research Laboratory Sami3 is Also a Model of the Ionosphere ionosphere/plasmasphere code is used to simulate the effect of Coulomb-collision heating of plasmasphere and ionosphere electrons by ring current ions. We find that, during stormtime peaks in the Dst index, energy is deposited at altitudes as low as 100 km. Heating along the entirety of any given field line, both in the ionosphere and plasmasphere, contributes to increased temperatures in the ionosphere F layer and inner magnetosphere and to subsequent cold O + outflows. However, relative to the heating of the plasmasphere, the direct heating of the ionosphere by ring current ions produces only small effects. Qualitative model-data agreement on the N + /O + density ratio is consistent with the hypothesis that these outflows are driven by thermal forcing.

J. Krall

Earth System Reanalysis in Support of Climate Model Improvements

Recent climate model developments, established through increased model resolution, have led to substantial improvements in model simulations of the time-evolving, coupled Earth system and its subcomponents. However, regardless of resolution, climate models will always produce climate features and variability that differ from the real world and will be prone to biases. This is due to many remaining uncertainties, such as in parametric and structural model uncertainty, in the initial conditions prescribed, and in the prescribed (scenario) forcing which varies on decadal to centennial timescales. Further model improvements are expected to arise specifically from improved representation of physical processes realized through model-data fusion. This will create an unprecedented opportunity to better exploit a large array of Earth observations, from in situ measurements to weather radars and satellite observations, as the resolved scales of the models approach those of the observations. For this, climate DA will be the central tool to bring models and observations into consistency, by improving initial conditions, inferring uncertain model parameters and structure, and quantifying uncertainty. Generally, there will be advantages and complementarities of adjoint-based smoother approaches, ensemble-based filter approaches, or new ML-inspired approaches. Yet, the ever-increasing model resolution will present growing challenges arising from computational cost, calling for new ways of performing data assimilation and model optimization. Using the complementarity in a hybrid approach, blending tools and concepts from variational, ensemble and ML methods might be what is required in the future. In this context ML could be important to handle non-linear responses, and to better approximate non-Gaussian distributions.

54 ENVIRONMENTAL SCIENCES

Antarctic ice sheet model comparison with uncurated geological constraints shows that higher spatial resolution improves deglacial reconstructions

Accurately reconstructing past changes to the shape and volume of the Antarctic ice sheet relies on the use of physically based and thus internally consistent ice sheet modeling, benchmarked against spatially limited geologic data. The challenge in model benchmarking against geologic data is diagnosing whether model-data misfits are the result of an inadequate model, inherently noisy or biased geologic data, and/or incorrect association between modeled quantities and geologic observations. In this work we address this challenge by (i) the development and use of a new model-data evaluation framework applied to an uncurated data set of geologic constraints, and (ii) nested high-spatial-resolution modeling designed to test the hypothesis that model resolution is an important limitation in matching geologic data. While previous approaches to model benchmarking employed highly curated datasets, our approach applies an automated screening and quality control algorithm to an uncurated public dataset of geochronological observations (specifically, cosmogenic-nuclide exposure-age measurements from glacial deposits in ice-free areas). This optimizes data utilization by including more geological constraints, reduces potential interpretive bias, and allows unsupervised assimilation of new data as they are collected. We also incorporate a nested model framework in which high-resolution domains are downscaled from a continent-wide ice sheet model. We highlight the application of this framework by applying these methods to a small ensemble of deglacial ice-sheet model simulations, and demonstrate that the nested approach improves the ability of model simulations to match exposure age data collected from areas of complex topography and ice flow. We develop a range of diagnostic model-data comparison metrics to provide more insight into model performance than possible from a single-valued misfit statistic, showing that different metrics capture different aspects of ice sheet deflation.

Geosciences

Adaptive Error Estimation in Linearized Ocean General Circulation Models

Data assimilation methods are routinely used in oceanography. The statistics of the model and measurement errors need to be specified a priori. This study addresses the problem of estimating model and measurement error statistics from observations. We start by testing innovation based methods of adaptive error estimation with low-dimensional models in the North Pacific (5-60 deg N, 132-252 deg E) to TOPEX/POSEIDON (TIP) sea level anomaly data, acoustic tomography data from the ATOC project, and the MIT General Circulation Model (GCM). A reduced state linear model that describes large scale internal (baroclinic) error dynamics is used. The methods are shown to be sensitive to the initial guess for the error statistics and the type of observations. A new off-line approach is developed, the covariance matching approach (CMA), where covariance matrices of model-data residuals are "matched" to their theoretical expectations using familiar least squares methods. This method uses observations directly instead of the innovations sequence and is shown to be related to the MT method and the method of Fu et al. (1993). Twin experiments using the same linearized MIT GCM suggest that altimetric data are ill-suited to the estimation of internal GCM errors, but that such estimates can in theory be obtained using acoustic data. The CMA is then applied to T/P sea level anomaly data and a linearization of a global GFDL GCM which uses two vertical modes. We show that the CMA method can be used with a global model and a global data set, and that the estimates of the error statistics are robust. We show that the fraction of the GCM-T/P residual variance explained by the model error is larger than that derived in Fukumori et al.(1999) with the method of Fu et al.(1993). Most of the model error is explained by the barotropic mode. However, we find that impact of the change in the error statistics on the data assimilation estimates is very small. This is explained by the large representation error, i.e. the dominance of the mesoscale eddies in the T/P signal, which are not part of the 21 by 1" GCM. Therefore, the impact of the observations on the assimilation is very small even after the adjustment of the error statistics. This work demonstrates that simult&neous estimation of the model and measurement error statistics for data assimilation with global ocean data sets and linearized GCMs is possible. However, the error covariance estimation problem is in general highly underdetermined, much more so than the state estimation problem. In other words there exist a very large number of statistical models that can be made consistent with the available data. Therefore, methods for obtaining quantitative error estimates, powerful though they may be, cannot replace physical insight. Used in the right context, as a tool for guiding the choice of a small number of model error parameters, covariance matching can be a useful addition to the repertory of tools available to oceanographers.

Chechelnitsky, Michael Y.

Chemical Data Assimilation: A Case Study of Solar Occultation Data From the Atlas 1 Mission of the Atmospheric Trace Molecule Spectroscopy Experiment

A key advantage of using data assimilation is the propagation of information from data-rich regions to data-poor regions, which is particularly relevant to the use of solar occultation data such as from ATMOS. For the first time an in depth uncertainty analyses is included in a photochemical model-data intercomparison including observation, representativeness, and theoretical uncertainty. Chemical data assimilation of solar occultation measurements can be used to reconstruct full diurnal cycles and to evaluate their chemical self-consistency. This paper considers as an example the measurements made by the Atmospheric Trace Molecule Spectroscopy Experiment (ATMOS) instrument Atlas-1 during March 1992 for a vertical profile flow tracking coordinates at an equivalent PV latitude of 38 S. ATMOS was chosen because it simultaneously observes several species. This equivalent PV latitude was chosen as it was where ATMOS n observed the atmosphere's composition over the largest range of altitudes. A single vertical profile was used so that the detailed diurnal information that assimilation utilizes could be highlighted. There is generally good self-consistency between the ATMOS Atlas-1 observations and photochemical theory.

Lary, D. J.

Winter-to-Summer Precipitation Phasing in Southwestern North America: A Multi-Century Perspective from Paleoclimatic Model-Data Comparisons

The phasing of winter-to-summer precipitation anomalies in the North American monsoon (NAM) region 2 (113.25 deg W-107.75 deg W, 30 deg N-35.25 deg N-NAM2) of southwestern North America is analyzed in fully coupled simulations of the Last Millennium and compared to tree ring reconstructed winter and summer precipitation variability. The models simulate periods with in-phase seasonal precipitation anomalies, but the strength of this relationship is variable on multidecadal time scales, behavior that is also exhibited by the reconstructions. The models, however, are unable to simulate periods with consistently out-of-phase winter-to-summer precipitation anomalies as observed in the latter part of the instrumental interval. The periods with predominantly in-phase winter-to-summer precipitation anomalies in the models are significant against randomness, and while this result is suggestive of a potential for dual-season drought on interannual and longer time scales, models do not consistently exhibit the persistent dual-season drought seen in the dendroclimatic reconstructions. These collective findings indicate that model-derived drought risk assessments may underestimate the potential for dual-season drought in 21st century projections of hydroclimate in the American Southwest and parts of Mexico.

Variability

Comparison of MERRA-2 and ECCO-V4 Ocean Surface Heat Fluxes: Consequences of Different Forcing Feedbacks on Ocean Circulation and Implications for Climate Data Assimilation

Forcing ocean models with reanalysis data is a common practice in ocean modeling. As part of this practice, prescribed atmospheric state variables and interactive ocean SST (Sea Surface Temperature) are used to calculate fluxes between the ocean and the atmosphere. When forcing an ocean model with reanalysis fields, errors in the reanalysis data, errors in the ocean model and errors in the forcing formulation will generate a different solution compared to other ocean reanalysis solutions (which also have their own errors). As a first step towards a consistent coupled ocean-atmosphere reanalysis, we compare surface heat fluxes from a state-of-the-art atmospheric reanalysis, the Modern-Era Retrospective analysis for Research and Applications, Version 2 (MERRA-2), to heat fluxes from a state-of-the-art oceanic reanalysis, the Estimating the Circulation and Climate of the Ocean Version 4, Release 2 (ECCO-v4). Then, we investigate the errors associated with the MITgcm (Massachusetts Institute of Technology general circulation model) ocean model in its ECCO-v4 ocean reanalysis configuration (1992-2011) when it is forced with MERRA- 2 atmospheric reanalysis fields instead of with the ECCO-v4 adjoint optimized ERA-interim state variables. This is done by forcing ECCO-v4 ocean with and without feedbacks from MERRA-2 related to turbulent fluxes of heat and moisture and the outgoing long wave radiation. In addition, we introduce an intermediate forcing method that includes only the feedback from the interactive outgoing long wave radiation. The resulting ocean circulation is compared with ECCO-v4 reanalysis and in-situ observations. We show that, without feedbacks, imbalances in the energy and the hydrological cycles of MERRA-2 (which are directly related to the fact it was created without interactive ocean) result in considerable SST drifts and a large reduction in sea level. The bulk formulae and interactive outgoing long wave radiation, although providing air-sea feedbacks and reducing model-data misfit, strongly relax the ocean to observed SST and may result in unwanted features such as large change in the water budget. These features have implications in a desired forcing recipe to be used. The results strongly and unambiguously argue for next generation data assimilation climate studies to involve fully coupled systems.

MERRA-2

Consequences of Different Air-Sea Feedbacks on Ocean Using MITgcm and MERRA-2 Forcing: Implications for Coupled Data Assimilation Systems

Ocean surface flux estimates from atmospheric and oceanic reanalyses contain errors that compensate for inaccuracies in the respective atmosphere and ocean models used to generate these reanalyses. A conundrum for climate studies is the discrepancy between surface fluxes that minimize model-data differences for an atmosphere-only model vs surface fluxes that minimize model-data differences for an ocean model. As a first step towards a consistent coupled ocean-atmosphere data-assimilation (DA) system, we compare surface net heat flux from a state-of-the-art atmospheric reanalysis, the Modern-Era Retrospective analysis for Research and Applications, Version 2 (MERRA-2), to net heat flux from a state-of-the-art ocean state estimate, the Estimating the Circulation and Climate of the Ocean Version 4 (ECCO-v4). The possible impacts of the MERRA-2 and ECCO-v4 air-sea net heat flux difference in a coupled DA system were assessed using a set of experiments designed to imitate different “flavors” of a coupled DA system in an ocean-only setup. This was done by forcing the ECCO-v4 underlying ocean model - the Massachusetts Institute of Technology general circulation model (MITgcm) - with different sets of MERRA-2 fields and utilizing different forcing methods. By doing so we were able to turn off different air-sea feedbacks which, in a coupled DA setup, are partially muted by the constraining observations. The set of experiments, therefore, represents a range of active feedbacks in different “flavors” of coupled data-assimilation systems. For the period 1992–2011, MERRA-2 net heat flux has a global mean difference of -4.9 Wm(exp -2) relative to ECCO-v4. When MERRA-2 surface fields are used to force MITgcm, imbalances in the energy and the hydrological cycles of MERRA-2, which are directly related to the fact that MERRA-2 was created without an interactive ocean, propagate to the ocean. The experiment in which MITgcm is forced with MERRA-2 fluxes (MERRA-2-flux experiment) results in a 2.5°C global mean Sea Surface Temperature (SST) cooling, a 1m reduction in global mean sea level, and other drastic changes in the large scale ocean circulation relative to those resulting when the MITgcm is forced with the optimized ECCO-v4 net heat flux (the ECCO-v4 experiment itself). When MITgcm is forced with MERRA-2 state variables (MERRA-2-state experiment), the SST is somewhat restored to the observed SST, but the errors are shifted to the water cycle, resulting in a global mean sea level increase of 2.7 m. To further explore the pros and cons of these two approaches, we introduce a new intermediate forcing method in which the ocean is forced with turbulent fluxes but has a long wave feedback. This method, unlike MERRA-2 state, preserves the MERRA-2 water and salinity cycles, and it reduces the SST error compared to the MERRA-2-flux experiment, but the SST is not as good as that in the MERRA-2-state experiment. Our results have implications for ocean-model forcing recipes and clearly reveal the undesirable consequences of limiting the feedbacks in either these types of experiments or in coupled DA.

Ehud Strobach