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At least 19 records

Lake Huron Enhances Snowfall Downwind of Lake Erie: A Modeling Study of the 2010 New Year’s Lake Effect Snowfall Event

In the Northeast and Great Lakes regions of the United States, the influence of multiple lakes on the overlying air can greatly affect lake-effect snowfall over downwind communities. To assess the impact of Lake Huron on snowfall downwind of Lake Erie, we simulated a lake-effect snow event which occurred from 1 to 6 January 2010 using the Regional Atmospheric Modeling System (RAMS). We found that the presence of Lake Huron enhances snowfall downwind of Lake Erie by almost 20% and leads to much heavier local snowfall totals than when Lake Huron is not present. This increase in snowfall is due to a lake-to-lake (L2L) convective band, as secondary circulations associated with lake-effect convection form over Lake Huron and persist overland between the lakes before reintensifying over Lake Erie. As these secondary circulations move over Lake Erie, lifting within the upward branch of the circulations accelerates the development of convection within the L2L band. Surface fluxes and convection over Lake Huron deepen the boundary layer, promoting deeper vertical development of this L2L band over Lake Erie. However, although this boundary layer modification strengthens the L2L band, we found that it actually reduced lake-effect snowfall produced by wind-parallel bands (WPB) in other parts of the lake. This indicates that boundary layer modification from upstream lakes may impact L2L bands differently than WPB which are not connected to upstream secondary circulations.

Lake effects↗

Thermal modeling of three lakes within the continuous permafrost zone in Alaska using the LAKE 2.0 model

Abstract. Lakes in the Arctic are important reservoirs of heat with much lower albedo in summer and greater absorption of solar radiation than surrounding tundra vegetation. In the winter, lakes that do not freeze to their bed have a mean annual bed temperature >0 ∘C in an otherwise frozen landscape. Under climate warming scenarios, we expect Arctic lakes to accelerate thawing of underlying permafrost due to warming water temperatures in the summer and winter. Previous studies of Arctic lakes have focused on ice cover and thickness, the ice decay process, catchment hydrology, lake water balance, and eddy covariance measurements, but little work has been done in the Arctic to model lake heat balance. We applied the LAKE 2.0 model to simulate water temperatures in three Arctic lakes in northern Alaska over several years and tested the sensitivity of the model to several perturbations of input meteorological variables (precipitation, shortwave radiation, and air temperature) and several model parameters (water vertical resolution, sediment vertical resolution, depth of soil column, and temporal resolution). The LAKE 2.0 model is a one-dimensional model that explicitly solves vertical profiles of water state variables on a grid. We used a combination of meteorological data from local and remote weather stations, as well as data derived from remote sensing, to drive the model. We validated modeled water temperatures with data of observed lake water temperatures at several depths over several years for each lake. Our validation of the LAKE 2.0 model is a necessary step toward modeling changes in Arctic lake ice regimes, lake heat balance, and thermal interactions with permafrost. The sensitivity analysis shows us that lake water temperature is not highly sensitive to small changes in air temperature or precipitation, while changes in shortwave radiation and large changes in precipitation produced larger effects. Snow depth and lake ice strongly affect water temperatures during the frozen season, which dominates the annual thermal regime of Arctic lakes. These findings suggest that reductions in lake ice thickness and duration could lead to more heat storage by lakes and enhanced permafrost degradation.

Clark, Jason A. (ORCID:0000000248105261)↗

Insights on Simulating Summer Warming of the Great Lakes: Understanding the Behavior of a Newly Developed Coupled Lake-Atmosphere Modeling System

The Laurentian Great Lakes are the world's largest freshwater system and regulate the climate of the Great Lakes region, which has been increasingly experiencing climatic, hydrological, and ecological changes. An accurate mechanistic representation of the Great Lakes thermal structure in Regional Climate Models (RCMs) is paramount to studying the climate of this region. Currently, RCMs have primarily represented the Great Lakes through coupled one-dimensional (1D) column lake models; this approach works well for small inland lakes but is unable to resolve the realistic hydrodynamics of the Great Lakes and leads to inaccurate representations of lake surface temperature (LST) that influence regional climate and weather patterns. This work overcomes this limitation by developing a fully two-way coupled modeling system using the Weather Research and Forecasting model and a three-dimensional (3D) hydrodynamic model. The coupled model system resolves the interactive physical processes between the atmosphere, lake, and surrounding watersheds; and validated against a range of observational data. The model is then used to investigate the potential impacts of lake-atmosphere coupling on the simulated summer LST of Lake Superior. By evaluating the difference between our two-way coupled modeling system and our observation-driven modeling system, we find that coupled-lake atmosphere dynamics can lead to a higher LST during June-September through higher net surface heat flux entering the lake in June and July and a lower net surface heat flux entering the lake in August and September. The unstratified water in June distributes the entering surface heat flux throughout the water column leading to a minor LST increase, while the stratified waters of July create a conducive thermal structure for the water surface to warm rapidly under the higher incoming surface heat flux. This research provides insight into the coupled modeling system behavior, which is critical for enhancing our predictive understanding of the Great Lakes climate system.

54 ENVIRONMENTAL SCIENCES↗

Forecasting Lake-Effect Precipitation in the Great Lakes Region Using NASA Enhanced-Satellite Data

Lake-effect precipitation is common in the Great Lakes region, particularly during the late fall and winter. The synoptic processes of lake-effect precipitation are well understood by operational forecasters, but individual forecast events still present a challenge. Locally run, high resolution models can assist the forecaster in identifying the onset and duration of precipitation, but model results are sensitive to initial conditions, particularly the assumed surface temperature of the Great Lakes. The NASA Short-term Prediction Research and Transition (SPoRT) Center has created a Great Lakes Surface Temperature (GLST) composite, which uses infrared estimates of water temperatures obtained from the MODIS instrument aboard the Aqua and Terra satellites, other coarser resolution infrared data when MODIS is not available, and ice cover maps produced by the NOAA Great Lakes Environmental Research Lab (GLERL). This product has been implemented into the Weather Research and Forecast (WRF) model Environmental Modeling System (WRF-EMS), used within forecast offices to run local, high resolution forecasts. The sensitivity of the model forecast to the GLST product was analyzed with a case study of the Lake Effect Storm Echinacea, which produced 10 to 12 inches of snowfall downwind of Lake Erie, and 8 to 18 inches downwind of Lake Ontario from 27-29 January 2010. This research compares a forecast using the default Great Lakes surface temperatures from the Real Time Global sea surface temperature (RTG SST), in the WRF-EMS model to the enhanced NASA SPoRT GLST product to study forecast impacts. Results from this case study show that the SPoRT GLST contained less ice cover over Lake Erie and generally cooler water temperatures over Lakes Erie and Ontario. Latent and sensible heat fluxes over Lake Ontario were decreased in the GLST product. The GLST product decreased the quantitative precipitation forecast (QPF), which can be correlated to the decrease in temperatures and heat fluxes. A slight increase in precipitation coverage was noted over Lake Erie due to a decrease in ice cover. Both the RTG SST and the GLST products predicted the precipitation south of the actual location of precipitation. This single case study is the first part of an examination to determine how MODIS data can be applied to improve model forecasts in the Great Lakes region.

Cipullo, Michelle↗

Influence of Lake Ice Biases in Reanalysis Data on Downscaled Climate Simulations over the Great Lakes Region

This data package contains observation-based and model-simulated datasets (all provided in NetCDF format) for evaluating how wintertime lake-ice representation affects regional weather and climate over the Laurentian Great Lakes (freshwater lake ecosystem) during the high–ice-cover winter of 2009. The observational component includes: (1) Stage IV gridded precipitation at 4 km, hourly resolution for January–February 2009 over the Great Lakes region (radar–gauge multisensor precipitation analyses); (2) Great Lakes Surface Environmental Analysis (GLSEA) satellite-derived lake-ice coverage at 1.3 km, daily resolution for the 2009 winter months, providing ice coverage over Lakes Superior, Michigan, Huron, Erie, and Ontario; and (3) in situ measurements at the Standard Rock site on Lake Superior from the Great Lakes Evaporation Network (GLEN) at hourly resolution, including near-surface atmospheric variables and sensible and latent heat fluxes (air–lake exchange) at a fixed point location. The modeling component provides corresponding fields from two simulations, both archived at 4 km, hourly resolution: a standalone Weather Research Forecasting model (WRF) run driven by the European Centre for Medium-Range Weather Forecasts (ECMWF) Reanalysis 5 (ERA5), and a two-way coupled model using WRF and the Finite Volume Community Ocean Model (WRF-FVCOM, a 3-D hydrodynamic lake model). These outputs include variables relevant to air–lake interaction and lake-effect processes (e.g., near-surface temperature, humidity, wind, precipitation, and surface turbulent fluxes), enabling direct comparison with the observational datasets. Users can analyze and visualize these NetCDF files with common tools such as Python (e.g., xarray, netCDF4, numpy, pandas), NCO/CDO, Panoply, or ncview; NetCDF variables can also be converted to other formats (e.g., CSV, GeoTIFF) using these utilities.

EARTH SCIENCE > ATMOSPHERE > ATMOSPHERIC TEMPERATU↗

Coupled Lake‐Atmosphere‐Land Physics Uncertainties in a Great Lakes Regional Climate Model

Abstract This study develops a surrogate‐based method to assess the uncertainty within a convective permitting integrated modeling system of the Great Lakes region, arising from interacting physics parameterizations across the lake, atmosphere, and land surface. Perturbed physics ensembles of the model during the 2018 summer are used to train a neural network surrogate model to predict lake surface temperature (LST) and near‐surface air temperature (T2m). Average physics uncertainties are determined to be 1.5C for LST and T2m over land, and 1.9C for T2m over lake, but these have significant spatiotemporal variations. We find that atmospheric physics parameterizations alone are the dominant sources of uncertainty (45%–53%), while lake and land parameterizations account for 33% and 38% of the uncertainty of LST and T2m over land respectively. Interactions of atmosphere physics parameterizations with those of the land and lake contribute to an additional 13%–17% of the total variance. LST and T2m over the lake are more uncertain in the deeper northern lakes, particularly during the rapid warming phase that occurs in late spring/early summer. The LST uncertainty increases with sensitivity to the lake model's surface wind stress scheme. T2m over land is more uncertain over forested areas in the north, where it is most sensitive to the land surface model, than the more agricultural land in the south, where it is most sensitive to the atmospheric planetary boundary and surface layer scheme. Uncertainty also increases in the southwest during multiday temperature declines with higher sensitivity to the land surface model.

54 ENVIRONMENTAL SCIENCES↗

Study of the Microbial Diversity of a Newly Discovered East Antarctic Freshwater Lake, L27C, and of a Perennially Ice-Covered Lake Untersee

The microbial communities that reside within freshwater lakes of Schirmacher and Untersee Oases in East Antarctica must cope with extreme conditions that may include cold temperature, annual freeze-thaw cycles, exposure to UV radiation, especially during the austral summer months, low light beneath thick ice-cover, followed by seasonal darkness. The objective of this study was to assess the microbial biodiversity and distribution from samples taken from two freshwater lakes (L27C and Lake Untersee) that were collected during the Tawani 2008 International Antarctic Expedition that conducted research in this region of Antarctica. L27C is a small, previously unreported lake residing 2 km WNW of Maitri Station at Schirmacher Oasis. Biodiversity and distribution of microorganisms within the lake were studied using both culture-independent and culture-dependent methodologies based upon the analysis of eubacterial 16S rRNA gene sequences. Lake Untersee, a perennially ice-covered, ultra-oligotrophic, lake in the Otto-von-Gruber-Gebirge (Gruber Mountains) of central Dronning Maud Land was also sampled and the microbial diversity was analyzed by eubacterial 16S rRNA gene sequences derived from pure cultures. Direct culturing of water samples from each lake on separate R2A growth medium exhibited a variety of microorganisms including: Janthinobacterium, Hymenobacter, Sphingamonas, Subtercola, Deinococcus, Arthrobacter, Flavobacterium, Polaromonas, Rhodoferax and Duganella. The evaluation of samples from L27C through culture-independent methodology identified a rich microbial diversity consisting of six different phyla of bacteria. The culture-independent analysis also displayed the majority of bacteria (56%) belonged to the Class gamma-proteobacteria within the phylum Proteobacteria. Within the Class gamma-proteobacteria, Acinetobacter dominated (48%) the total microbial load. Overall, L27C exhibited 7 different phyla of bacteria and 20 different genera. Statistical analysis (Shannon-Weaver Diversity Index and Simpson Diversity Index) of the biodiversity of L27C displayed a moderately rich and diverse community. Investigations of the biodiversity and distribution of microorganisms in these lakes will help further our understanding of how the physical environment impact the structure and function within these microbially dominated ecosystems.

Huang, Jonathan P.↗

Great Salt Lake Health and Air Quality: Monitoring Lakebed Exposure and its Impact on Air Quality and Environmental Hazards in the Great Salt Lake Watershed

Water flow into the Great Salt Lake has declined rapidly over the last forty years due to human withdrawals and climate change. As a result of declining lake levels, over 50% of the lakebed is now exposed. Dust storms may grow in frequency and intensity across Northern Utah as lakebed dust becomes airborne under specific meteorological conditions. In our research project, we utilized satellite imagery from Terra and Aqua, Sentinel-5P, CALIPSO, Landsat 5 TM, Landsat 7 ETM+, Landsat 8 OLI-2, Suomi NPP, ground sensor environmental data, and demographic data to understand the relationship between lake desiccation and dust, and the impact of pollution upon the communities surrounding the Great Salt Lake. By plotting changes in Lake Surface Area against Aerosol Optical Depth (AOD) over our study period (2010-2022), we found an inverse relationship (R2=0.3423) between lake surface area and dust levels within our study area. We conducted a Vertical Feature Mask (VFM) and Extinction Coefficient Plot, from which we identified that during dust events, the aerosol type is mainly polluted dust and the aerosol height is 200 meters from the surface. Lastly, we created bivariate choropleth maps, which demonstrate which census tracts within our study area are most vulnerable to AOD (a proxy for PM2.5 from dust), NO2 and HCHO (precursors to ozone). In summary, our findings revealed that declining lake levels are associated with an increase in intensity of dust events, and these dust events will particularly impact residents of Tooele County and the west side of Salt Lake City. Project resources support partner needs by informing targeted air monitoring efforts, lakebed management practices, and advocacy efforts for GSL stewardship.

Terminal Saline Lake↗

Hydropower Infrastructure - LAkes, Reservoirs, and RIvers (HILARRI), v4

HILARRI is a database of links between major datasets of operational hydropower dams and powerplants, and inland water bodies. These connections are critical for conducting large-scale analysis of hydropower infrastructure and their associated natural and engineered water systems. Features include: – Dams from the National Inventory of Dams (2025) and the Global Reservoir and Dam Database (GRanD v1.3) – Hydropower plants from the Existing Hydropower Assets dataset (EHA 2025) – Power plants that are listed in the 2025 U.S. Hydropower Development Pipeline Data or were listed in previous versions of the dataset These hydropower infrastructure features are linked to several major datasets that provide hydrologic and hydraulic information relevant for analysis of hydropower systems that includes the integral water resources. That information comes from: – Products from the National Hydrography Dataset (NHD) – NHDPlusV2 Medium Resolution river network flowlines, – NHD waterbodies (limited to lakes and reservoirs), – NHD Watershed Boundary Dataset (HUC12-level for the Conterminous United States (CONUS)) – NHD High Resolution waterbodies – HydroLAKES water bodies (lakes and reservoirs) – LAGOS-US lakes and reservoirs – EPA National Lakes Assessment (2007, 2012, 2017, and 2022) – The Reservoir Sedimentation Database (RESSED) – EPA SuRGE sampling locations Unique identifiers are used to facilitate joining to the original full datasets. For example, characteristics of NHD flowlines such as estimated average flow rate can be joined from the NHDPlusV2 dataset to a dam or power plant listed in HILARRI based on the ID field, “COMID”, that is common to both datasets. HILARRI only includes basic information about identifiers, location, and data quality or usage notes. It does not contain the attributes or time series data associated with these sites. The HILARRI dataset incorporates information from several datasets to facilitate more effective and accurate analysis of hydropower infrastructure and their associated waterbodies. For example, dams were checked against the most recent American Rivers Dam Removal Database to identify and flag facilities that may no longer exist. Additionally, dams that are listed multiple times in the NID are identified and flagged to avoid double-counting when analyzing and summarizing information. Other quality flags include certainty of operational hydropower (i.e., if one or more datasets indicates hydropower at a particular location), whether an associated water body is accurate or composed of multiple polygons, or whether there is a known issue with reported characteristics in one of the underlying datasets. These additional data flags are designed to increase confidence in data usage for individual to large-scale analyses.

Hansen, Carly [ORNL] (ORCID:0000000193280838)↗

Comparison of the Microbial Diversity and Abundance Between the Freshwater Land-Locked Lakes of Schirmacher Oasis and the Perennially Ice-Covered Lake Untersee in East Antarctica

Extreme conditions such as low temperature, dryness, and constant UV-radiation in terrestrial Antarctica are limiting factors of the survival of microbial populations. The objective of this study was to investigate the microbial diversity and enumeration between the open water lakes of Schirmacher Oasis and the permanently ice-covered Lake Untersee. The lakes in Schirmacher Oasis possessed abundant and diverse group of microorganisms compared to the Lake Untersee. Furthermore, the microbial diversity between two lakes in Schirmacher Oasis (Lake L27C and L47) was compared by culture-based molecular approach. It was determined that L27Chad a richer microbial diversity representing 5 different phyla and 7 different genera. In contrast L47 consisted of 4 different phyla and 6 different genera. The difference in microbial community could be due to the wide range of pH between L27C (pH 9.1) and L47 (pH 5.7). Most of the microbes isolated from these lakes consisted of adaptive biological pigmentation. Characterization of the microbial community found in the freshwater lakes of East Antarctica is important because it gives a further glimpse into the adaptation and survival strategies found in extreme conditions.

Huang, Jonathan↗

Planetary Lake Lander - A Robotic Sentinel to Monitor a Remote Lake

The Planetary Lake Lander Project is studying the impact of rapid deglaciation at a high altitude alpine lake in the Andes, where disrupted environmental, physical, chemical, and biological cycles result in newly emerging natural patterns. The solar powered Lake Lander robot is designed to monitor the lake system and characterize both baseline characteristics and impacts of disturbance events such as storms and landslides. Lake Lander must use an onboard adaptive science-on-the-fly approach to return relevant data about these events to mission control without exceeding limited energy and bandwidth resources. Lake Lander carries weather sensors, cameras and a sonde that is winched up and down the water column to monitor temperature, dissolved oxygen, turbidity and other water quality parameters. Data from Lake Lander is returned via satellite and distributed to an international team of scientists via web-based ground data systems. Here, we describe the Lake Lander Project scientific goals, hardware design, ground data systems, and preliminary data from 2011. The adaptive science-on-the-fly system will be described in future papers.

Pedersen, Liam↗

Lake-Effect Snowstorm Events and Associated Snowfall Totals Integrated from NOAA Storm Reports, ERA5, and HRRR for the Laurentian Great Lakes (1997–2024)

Lake-effect snowstorms are localized, impactful winter weather phenomena that can generate substantial snowfall totals and pose significant challenges for forecasting, transportation, and regional infrastructure. To support the analysis and modeling of these events, this dataset compiles observational reports of lake-effect snowstorms alongside corresponding snowfall estimates derived from gridded atmospheric datasets. The observational component of the data originates from the National Weather Service (NWS) winter storm report, subset to lake-effect snow event type, covering 1997–2024. For each lake-effect snow event, this data provides the impacted county, event start and end datetimes at an hourly resolution, as well as relevant storm narratives. The complementary reanalysis-derived data is sourced from European Centre for Medium-Range Weather Forecasts (ECMWF) Reanalysis 5 (ERA5) and High-Resolution Rapid Refresh (HRRR) gridded data. For both gridded datasets, the maximum total snowfall (in units mm) was extracted, constrained by the county and datetimes specified by the observational report. ERA5 data covers the entire observational period (1997–2024), whereas HRRR data is only available from November 2016 – December 2024. Three CSV files are provided here: (1) the observational lake-effect snow event report, (2) ERA5 maximum snowfall detections for each event, and (3) HRRR maximum snowfall detections for each event. Relevant data from the observational files, such as impacted state and county, event datetimes, and event IDs, were included for convenience. Users can inspect and visualize the data using tools such as Microsoft Excel and Python pandas/matplotlib packages. This dataset may support a variety of applications, including climatological analyses of lake-effect snowfall, evaluation of snowfall representation in atmospheric datasets and numerical weather prediction models, and the development of machine learning approaches for detecting or predicting lake-effect snowfall events.

EARTH SCIENCE > ATMOSPHERE > PRECIPITATION > SOLID↗

Gas exchange on Mono Lake and Crowley Lake, California

Gas exchange coefficients (k) have been determined for freshwater Crowley Lake and saline Mono Lake through the use of a man-made purposefully injected gas, SF6. The concentration decreased from an initial value of 40 to 4 pmol/L for Mono Lake and from 20 to 1 pmol/L for Crowley lake over a period of 6 wks. Wind-speed (u) records from anemometers on the shore of each lake made it possible to determine the relationship between k and u. The average u and k values for the experiment were identical for the two lakes, despite the large chemical differences. It is estimated that, for the u values observed over Mono Lake from July to December 1984, the exchange of CO2 occurred 2.5 times faster than without chemical enhancement. This is a factor of 4 lower than needed to explain the high invasion rate of C-14 produced by nuclear bomb tests.

Wanninkhof, Rik↗

Changes in ice cover thickness and lake level of Lake Hoare, Antarctica - Implications for local climatic change

Results are reported from 10 years of ice-thickness measurements at perennially ice-covered Lake Hoare in southern Victoria Land, Antarctica. The ice cover of this lake had been thinning steadily at a rate exceeding 20 cm/yr during the last decade but seems to have recently stabilized at a thickness of 3.3 m. Data concerning lake level and degree-days above freezing are presented to show the relationship between peak summer temperatures and the volume of glacier-derived meltwater entering Lake Hoare each summer. From these latter data it is inferred that peak summer temperatures have been above 0 C for a progressively longer period of time each year since 1972. Possible explanations for the thinning of the lake ice are considered. The thickness of the ice cover is determined by the balance between freezing during the winter and ablation that occurs all year but maximizes in summer. It is suggested that the term most likely responsible for the change in the ice cover thickness at Lake Hoare is the extent of summer melting, consistent with the rising lake levels.

Wharton, Robert A., Jr.↗

Biogeochemical cycling of manganese in Oneida Lake, New York: whole lake studies of manganese

Oneida Lake, New York is a eutrophic freshwater lake known for its abundant manganese nodules and a dynamic manganese cycle. Temporal and spatial distribution of soluble and particulate manganese in the water column of the lake were analyzed over a 3-year period and correlated with other variables such as oxygen, pH, and temperature. Only data from 1988 are shown. Manganese is removed from the water column in the spring via conversion to particulate form and deposited in the bottom sediments. This removal is due to biological factors, as the lake Eh/pH conditions alone can not account for the oxidation of the soluble manganese Mn(II). During the summer months the manganese from microbial reduction moves from the sediments to the water column. In periods of stratification the soluble Mn(II) builds up to concentrations of 20 micromoles or more in the bottom waters. When mixing occurs, the soluble Mn(II) is rapidly removed via oxidation. This cycle occurs more than once during the summer, with each manganese atom probably being used several times for the oxidation of organic carbon. At the end of the fall, whole lake concentrations of manganese stabilize, and remain at about 1 micromole until the following summer, when the cycle begins again. Inputs and outflows from the lake indicate that the active Mn cycle is primarily internal, with a small accumulation each year into ferromanganese nodules located in the oxic zones of the lake.

NASA Discipline Exobiology↗

Forecasting Lake-Effect Snow in the Great Lakes Using NASA Satllite Data

This slide presentation reviews the forecast of the lake effect snow in the Great Lakes region using models and infrared estimates of Great Lake Surface Temperatures (GLSTs) from the MModerate Resolution Imaging Spectroradiometer (MODIS) instrument on Terra and Aqua satellites, and other satellite data. This study analyzes Lake Erie and Lake Ontario which produce storm total snowfall ranged from 8-18 inches off of Lake Ontario and 10-12 inches off of Lake Erie for the areas downwind.

Cipullo, Michelle↗

Evaluate data lake design for the accelerator control system

Increasing precision in automation for modern particle accelerators not only creates a requirement to gather data from all devices but also demands scalable and high-performance data infrastructure with the capability of handling vast incoming device data. A well architected data lake is suitable for such a system which integrates real-time data acquisition, transient data caching, and long-term storage. This paper evaluates data lake architecture for an Accelerator Control System (ACS), focusing on two critical components of a data lake, data cache and long-term storage.

Jaikar, Amol [Fermilab]↗

Antarctic lake viromes reveal potential virus associated influences on nutrient cycling in ice-covered lakes

The McMurdo Dry Valleys (MDVs) of Antarctica are a mosaic of extreme habitats which are dominated by microbial life. The MDVs include glacial melt holes, streams, lakes, and soils, which are interconnected through the transfer of energy and flux of inorganic and organic material via wind and hydrology. For the first time, we provide new data on the viral community structure and function in the MDVs through metagenomics of the planktonic and benthic mat communities of Lakes Bonney and Fryxell. Viral taxonomic diversity was compared across lakes and ecological function was investigated by characterizing auxiliary metabolic genes (AMGs) and predicting viral hosts. Our data suggest that viral communities differed between the lakes and among sites: these differences were connected to microbial host communities. AMGs were associated with the potential augmentation of multiple biogeochemical processes in host, most notably with phosphorus acquisition, organic nitrogen acquisition, sulfur oxidation, and photosynthesis. Viral genome abundances containing AMGs differed between the lakes and microbial mats, indicating site specialization. Using procrustes analysis, we also identified significant coupling between viral and bacterial communities (p = 0.001). Finally, host predictions indicate viral host preference among the assembled viromes. Collectively, our data show that: (i) viruses are uniquely distributed through the McMurdo Dry Valley lakes, (ii) their AMGs can contribute to overcoming host nutrient limitation and, (iii) viral and bacterial MDV communities are tightly coupled.

Microbiology↗