Investigation of environmental change pattern in Japan. A study on change of environmental condition of Ise Bay using LANDSAT data
There are no author-identified significant results in this report.
Maruyasu, T.↗
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Intraspecific Reaction Norm Variation Controls the Eco-Evolutionary Consequences of Environmental Change
As environmental change accelerates globally, understanding concurrent organismal, species, and community responses is increasingly vital. Here, we examine these collective responses by incorporating genotype-specific thermal reaction norms into an eco-evolutionary predator-prey model, allowing us to track simultaneous phenotypic, ecological, and evolutionary responses to environmental change within ecological communities. We show that the reaction norms expressed by genotypes within a population determine how a community switches between different eco-evolutionary outcomes with changes in temperature. We identify how different components of phenotypic variation in thermal reaction norms—environmental (E), additive environmental and genetic (E + G), and gene-by-environment interactions (G × E)—influence eco-evolutionary dynamics and outcomes as temperature changes. Furthermore, our findings underscore how complex eco-evolutionary responses to environmental change ultimately emerge from variation in reaction norms among genotypes, offering new mechanistic insights into environmental impacts on adaptation, the maintenance of phenotypic and genetic variation, and ecological stability, which is crucial for understanding and predicting eco-evolutionary effects of rapid environmental change in the future.
Eco-evolutionary↗
Adaptations of Endolithic Communities to Abrupt Environmental Changes in A Hyper-Arid Desert
The adaptation mechanisms of microbial communities to natural perturbations remain relatively unexplored, particularly in extreme environments. The extremophilic communities of halite (NaCl) nodules from the hyper-arid core of the Atacama Desert are self-sustained and represent a unique opportunity to study functional adaptations and community dynamics with changing environmental conditions. We transplanted halite nodules to different sites in the desert and investigated how their taxonomic, cellular, and biochemical changes correlated with water availability, using environmental data modeling and metagenomic analyses. Salt-in strategists, mainly represented by haloarchaea, significantly increased in relative abundance at sites characterized by extreme dryness, multiple wet/dry cycles, and colder conditions. The functional analysis of metagenome-assembled genomes (MAGs) revealed site-specific enrichments in archaeal MAGs encoding for the uptake of various compatible solutes and for glycerol utilization. These findings suggest that opportunistic salt-in strategists took over the halite communities at the driest sites. They most likely benefited from metabolites newly released in the environment by the death of microorganisms least adapted to the new conditions. The observed changes were consistent with the need to maximize cellular bioenergetics when confronted with lower water availability and higher salinity, providing valuable information on microbial community adaptations and resilience to climate change.
Atacama↗
Dynamic, Intermediate Soil Carbon Pools May Drive Future Responsiveness to Environmental Change
Accurately capturing dynamic soil response to disturbance effects in agroecosystem models remains elusive, thereby limiting projections of climate change mitigation potential. Perennial grasses cultivated in zero‐tillage management systems hold promise as sustainable agroecosystems. High‐yielding tropical C 4 grasses often have extensive rooting systems, and the belowground processes of root turnover, aggregate formation, and mineral stabilization drove rapid C accumulation after cultivation in a recent study. We sought (i) to understand and constrain the size and responsiveness of dynamic, intermediate‐cycling C pools contributing to the observed C accrual rates, and (ii) to simulate C stocks over time under the disturbance of elevated temperature using soil incubation at multiple temperatures and physical fractionation via density and sonication. Three‐pool transfer modeling of soil incubations revealed small pools of readily available (i.e., days to months) microbial substrate that were responsive to temperature, time since cultivation, and inputs. Larger, kinetically slow‐cycling pools were more indicative of long‐term (i.e., years to decades) changes in C stock and strongly connected to measured changes in physical fractions. Combining the sensitivity of readily available microbial substrate with three‐pool transfer modeling of the physical fractions over time since cultivation revealed that dynamic transfers of inputs occurred between the free organic and aggregate‐protected fractions, and from these fractions to the mineral‐associated dense fraction. Under 5°C temperature elevation, increased transfer rates outweighed elevated decomposition losses to sustain soil C accrual into the future. To effectively plan managed landscapes and monitor sustainable agroecosystems for climate change mitigation, tools must incorporate the complexity of soil response to change. Core Ideas Dynamic aspects of soil C are inadequately represented in most models. Intermediate‐cycling pools are more responsive to disturbances than thought. Root inputs are rapidly moved from particulate debris to mineral‐bound stable pools. Temperature increased the transfer rate to stable pools and sustained C accumulation Climate change mitigation projections must capture dynamic responses in agroecosystems.
Crow, Susan E.↗
Investigation of environmental change pattern in Japan: Application of LANDSAT-2 data for understanding environmental changes in the coastal and of shore zone
There are no author-identified significant results in this report.
Maruyasu, T.↗
Investigation of environmental change pattern in Japan. Application of LANDSAT-2 data for understanding environmental change in the coastal and offshore zone
There are no author-identified significant results in this report.
Maruyasu, T.↗
The effect of changing environmental conditions on microwave signatures of forest ecosystems - Preliminary results of the March 1988 Alaskan aircraft SAR experiment
In preparation for the ESA ERS-1 mission, a series of multitemporal, multifrequency, multipolarization aircraft SAR data sets were acquired near Fairbanks in March 1988. P-, L-, and C-band data were acquired with the NASA/JPL Airborne SAR on five different days over a period of two weeks. The airborne data were augmented with intensive ground calibration data as well as detailed simultaneous in situ measurements of the geometric, dielectric, and moisture properties of the snow and forest canopy. During the time period over which the SAR data were collected, the environmental conditions changed significantly; temperatures ranged from unseasonably warm (1 to 9 C) to well below freezing (-8 to -15 C), and the moisture content of the snow and trees changed from a liquid to a frozen state. The SAR data clearly indicate the radar return is sensitive to these changing environmental factors, and preliminary analysis of the L-band SAR data shows a 0.4 to 5.8 dB increase (depending on polarization and canopy type) in the radar cross section of the forest stands under the warm conditions relative to the cold. These SAR observations are consistent with predictions from a theoretical scattering model.
Way, Jobea↗
Light, temperature, and leaf nitrogen distribution in the tropical rain forest of Biosphere 2 and their importance in the mathematical models for global environmental changes
As the environmental changes occur throughout the world in rapid rate, we need to have further understandings for our planet. Since the ecosystems are so complex, it is almost impossible for us to integrate every factor. However, mathematical models are powerful tools which can be used to simulate those ecosystems with limited data. In this project, I collected light intensity, canopy leaf temperature and Air Handler (AHU) temperature, and nitrogen concentration in the leaves for different profiles in the rainforest mesocosm. These data will later be put into mathematical models such as "big-leaf" and "sun/shade" models to determine how these factors will affect CO2 exchange in the rainforest. As rainforests are diminishing from our planet and their existence is very important for all living things on earth, it is necessary for us to learn more about the unique system of rainforests and how we can co-exist rather than destroy.
Tohda, Motofumi↗
Information theory and machine learning illuminate large‐scale metabolomic responses of Brachypodium distachyon to environmental change
SUMMARY Plant responses to environmental change are mediated via changes in cellular metabolomes. However, <5% of signals obtained from liquid chromatography tandem mass spectrometry (LC‐MS/MS) can be identified, limiting our understanding of how metabolomes change under biotic/abiotic stress. To address this challenge, we performed untargeted LC‐MS/MS of leaves, roots, and other organs of Brachypodium distachyon (Poaceae) under 17 organ–condition combinations, including copper deficiency, heat stress, low phosphate, and arbuscular mycorrhizal symbiosis. We found that both leaf and root metabolomes were significantly affected by the growth medium. Leaf metabolomes were more diverse than root metabolomes, but the latter were more specialized and more responsive to environmental change. We found that 1 week of copper deficiency shielded the root, but not the leaf metabolome, from perturbation due to heat stress. Machine learning (ML)‐based analysis annotated approximately 81% of the fragmented peaks versus approximately 6% using spectral matches alone. We performed one of the most extensive validations of ML‐based peak annotations in plants using thousands of authentic standards, and analyzed approximately 37% of the annotated peaks based on these assessments. Analyzing responsiveness of each predicted metabolite class to environmental change revealed significant perturbations of glycerophospholipids, sphingolipids, and flavonoids. Co‐accumulation analysis further identified condition‐specific biomarkers. To make these results accessible, we developed a visualization platform on the Bio‐Analytic Resource for Plant Biology website ( https://bar.utoronto.ca/efp_brachypodium_metabolites/cgi‐bin/efpWeb.cgi ), where perturbed metabolite classes can be readily visualized. Overall, our study illustrates how emerging chemoinformatic methods can be applied to reveal novel insights into the dynamic plant metabolome and stress adaptation.
59 BASIC BIOLOGICAL SCIENCES↗
Migration and Livelihood Constellations: Assessing Common Themes in the Face of Environmental Change in Somalia and Among Agro-Pastoral Peoples
Research on migration has become more challenging due to at least four factors: (1) more complex migration traditions; (2) the development of migration economies that engage many types of migrants from ever more social and cultural backgrounds; (3) increasing likelihood of climate change-driven environmental migration; and (4) increasing likelihood of conflict-based migration in some contexts. These developments have shaken economic theories of migration and have encouraged interdisciplinary, methodologically mixed, qualitative and quantitative research and analysis. From a review of the literature, we have gleaned 11 common themes about environmental, economic and conflict migration that we differentiate by process (migration behaviours that are still evolving) and patterns (migration behaviours that have become customary). We then consider how positive and negative dimensions of migration can be captured and represented with close attention to livelihood constellations (multiple economic activities combined by individuals, households and families). Finally, focusing on Somalia and agro-pastoral peoples generally, where recent environmental and conflict migration have been added to decades of economic migration and centuries of seasonal, environmental migration associated with pastoralism, we combine historical and qualitative work to demonstrate the value of a livelihood constellation perspective.
migration↗
Investigating the eco‐evolutionary response of microbiomes to environmental change
Abstract Microorganisms are the primary engines of biogeochemical processes and foundational to the provisioning of ecosystem services to human society. Free‐living microbial communities (microbiomes) and their functioning are now known to be highly sensitive to environmental change. Given microorganisms' capacity for rapid evolution, evolutionary processes could play a role in this response. Currently, however, few models of biogeochemical processes explicitly consider how microbial evolution will affect biogeochemical responses to environmental change. Here, we propose a conceptual framework for explicitly integrating evolution into microbiome–functioning relationships. We consider how microbiomes respond simultaneously to environmental change via four interrelated processes that affect overall microbiome functioning (physiological acclimation, demography, dispersal and evolution). Recent evidence in both the laboratory and the field suggests that ecological and evolutionary dynamics occur simultaneously within microbiomes; however, the implications for biogeochemistry under environmental change will depend on the timescales over which these processes contribute to a microbiome's response. Over the long term, evolution may play an increasingly important role for microbially driven biogeochemical responses to environmental change, particularly to conditions without recent historical precedent.
54 ENVIRONMENTAL SCIENCES↗
Systematic comparison of lncRNAs with protein coding mRNAs in population expression and their response to environmental change
Background: Long non-coding RNA (lncRNA) is a class of non-coding RNA with important regulatory roles in biological process of organisms. The systematic comparison of lncRNAs with protein coding mRNAs in population expression and their response to environmental change are still poorly understood. Here we identified 17,610 lncRNAs and calculated their expression levels based on RNA-seq of 80 individuals of Miscanthus lutarioriparius from two environments, the nearly native habitats and transplanted field, respectively. Results: LncRNAs had significantly higher expression diversity and lower expression frequency in population than protein coding mRNAs in both environments, which suggested that lncRNAs may experience more relaxed selection or divergent evolution in population compared with protein coding RNAs. In addition, the increase of expression diversity for lncRNAs was always significantly higher and the magnitude of fold change of expression in new stress environment was significantly larger than protein-coding mRNAs. These results suggested that lncRNAs may be more sensitive to environmental change than protein-coding mRNAs. Analysis of environment-robust and environment-specific lncRNA-mRNA co-expression network between two environments revealed the characterization of lncRNAs in response to environmental change. Furthermore, candidate lncRNAs contributing to water use efficiency (WUE) identified based on the WUE-lncRNA-mRNA co-expression network suggested the roles of lncRNAs in response to environmental change. Conclusion: Our study provided a comprehensive understanding of expression characterization of lncRNAs in population for M. lutarioriparius under field condition, which would be useful to explore the roles of lncRNAs and could accelerate the process of adaptation in new environment for many plants.
Expression diversity↗
Assessing the response of methane hydrates to environmental change at the Svalbard continental margin
This project reflects the results of cooperative research efforts between the US Department of Energy and scientists from Norway and Germany, who collaboratively designed the study, collected and analyzed samples from the water column and sediment and arrive at conclusions presented in joint publications. The main goal of the project was to assess the role of gas hydrate deposits in modulating methane discharge revealed through water column data, and assess the changes in environmental parameters, geochemical and microbiological conditions that drive the methane release in this high latitude region. Samples and data were collected from seven expeditions that encompassed extensive water column surveys, gravity coring, remotely-operated towed instrumentation and seafloor drilling campaigns. Geochemical and microbiological results were interpreted in the context of correlative geophysical data and numerical models, to generate a comprehensive and interdisciplinary view of the processes operating along the Svalbard margin. Incubation experiments complement the filed observations and provide additional data on the microbiological response to methane change. Collectively our results show that methane seepage in this margin is a component of a large methane plume, the Svalbard plume, which is not associated with gas hydrate processes. Consistently, numerical models of data from shallow (gravity cores offshore Storfjordrenna, bearing gas hydrate) and deep (MeBo drilling offshore Prins Karls Foreland) sediment samples show that methane and gas hydrate dynamics at sites that lie within the upper edge of gas hydrate stability are not responding to modern changes in bottom water temperature. Rather the data point to a long history of methane release, dominantly controlled by large scale Earth system changes (e.g., geology, oceanography, and glaciology) with gas hydrate as a temporary methane reservoir. Further results document the episodicity of the methane release, the role of microbes in sequestering methane carbon into authigenic carbonate, reaction networks involved in carbon recycling pathways at the sulfate-methane transition, and response of microbial communities to changes in methane flux allowing for a richer understanding of microbial ecology in response to change at methane seep sites.
58 GEOSCIENCES↗
Root and Microbial Soil CO 2 and CH 4 Fluxes Respond Differently to Seasonal and Episodic Environmental Changes in a Temperate Forest
Upland forest soils are typically major atmospheric carbon dioxide (CO 2 ) sources and methane (CH 4 ) sinks, but the contributions of root and microbial processes, as well as their separate temporal responses to environmental change, remain poorly understood. This 2-year study was conducted in a temperate, deciduous forest located on the Chesapeake Bay in Maryland, USA. We used temporal CO 2 and CH 4 flux measurements, exclusion-source partitioning, and an ecosystem-scale flooding experiment to understand how carbon (C) fluxes, and their root and microbial sources, respond to seasonal and episodic environmental change. Here, we show that the root-and-rhizosphere component of soil CO 2 and CH 4 flux is significant and that its dependence on soil temperature and volumetric water content (VWC) influences soil C dynamics at seasonal timescales. Experimental flooding shows that CO 2 and CH 4 flux responses to episodic moisture change were driven by suppression of soil heterotrophs, while root respiration did not respond to transient hydrologic disturbance. Methane uptake responded strongly to episodic inundation, reinforcing the important role of soil moisture in the short-term control of the forest soil CH 4 sink. However, despite the clear seasonality of CH 4 uptake, as well as its strong response to short-term experimental inundation, temperature and VWC were weak predictors of CH 4 uptake at a seasonal timescale. We suggest that CH 4 consumption in the long-term may be determined by vegetation, nutrients, microbial communities, or other factors correlated with seasonal changes. Our results indicate that root and microbial sources of both CO 2 and CH 4 flux respond differently in timing and magnitude to seasonal and episodic environmental change.
54 ENVIRONMENTAL SCIENCES↗
The Shared Socio-economic Pathways: Trajectories for human development and global environmental change
This Special Issue presents the Shared Socio-economic Pathways (SSPs), a set of 5 storylines on possible trajectories for human development and global environmental change during the 21st century. The information presented in the Special Issue has been developed over the last few years as a joint community effort and includes both qualitative narratives and results of quantitative model analysis. The SSPs form part of a larger set of community scenarios for analysis of climate change. Such community scenarios form a key tool for analysis of analysis of global environmental change and sustainable development problems. They allow exploration of different futures with and without response strategies. They also form a key tool to link across different disciplines and scales. They allow the same scenarios to be used in research on driving forces of climate change, the physical climate system, climate impacts and adaptation and mitigation strategies. Such scenarios can also link research across different research areas (e.g. climate change and biodiversity analysis) or be used across different scales (global, regional and local scales). Finally, they also have a key function as a consistent data source (population projections, climate projections and insights into land and energy development, for instance).
Van Vuuren, Detlef↗
Late Holocene Environmental Changes from NY-NJ Estuaries
High-resolution records of environmental change in the lower Hudson estuary are quite rare. We present preliminary data from several marshes in the New York- New Jersey region in order to understand the late Holocene environmental history of this region. Our project includes salt marsh cores from Hackensack, Piermont, Staten Island, and Jamaica Bay. Our preliminary research has focused on a 11.15 m sediment core from Piermont Marsh, New York (40 deg N, 74 deg W) in an attempt to document the Holocene environmental history of the region. Lithology, loss -on -ignition (LOI), pollen, plant macrofossils, charcoal, and foraminifera were analyzed. Core lithology consists of peat, silts, and clays that vary in color and texture. The base of the core is AMS C-14 dated to 4190 yr BP. Preliminary low-resolution analysis of the core to date includes sampling at the 1-meter interval throughout the core. LOI of the sediments ranges from 1% to 85%. Average rate of deposition is about .26 cm/yr. Major changes in pollen percentages are visible throughout the core.
Peteet, Dorothy M.↗
Late Holocene Environmental Changes from NY-NJ Estuaries
High-resolution records of environmental change in the lower Hudson estuary are quite rare. We present preliminary data from several marshes in the New York- New Jersey region in order to understand the late Holocene environmental history of this region. Our project includes salt marsh cores from Hackensack, Piermont, Staten Island, and Jamaica Bay. Our preliminary research has focused on a 11.15 m. sediment core from Piermont Marsh, New York (40 N, 74 W) in an attempt to document the Holocene environmental history of the region. Lithology, loss-on-ignition (LOI), pollen, plant macrofossils, charcoal, and foraminifera were analyzed. Core lithology consists of peat, silts, and clays that vary in color and texture. The base of the core is AMS C-14 dated to 4190 yr BP. Preliminary low-resolution analysis of the core to date includes sampling at the 1-meter interval throughout the core. LOI of the sediments ranges from 1% to 85%. Average rate of deposition is about .26 cm/yr. Major changes in pollen percentages are visible throughout the core.
Peteet, Dorothy M.↗
Space-Based Ornithology - Studying Bird Migration and Environmental Change in North America
Natural fluctuations in the availability of critical stopover sites coupled with anthropogenic destruction of wetlands, land-use change, and anticipated losses due to climate change present migratory birds with a formidable challenge. Space based technology in concert with bird migration modeling and geographical information analysis yields new opportunities to shed light on the distribution and movement of organisms on the planet and their sensitivity to human disturbances and environmental changes. At the NASA Goddard Space Flight Center, we are creating ecological forecasting tools for science and application users to address the consequences of loss of wetlands, flooding, drought or other natural disasters such as hurricanes on avian biodiversity and bird migration. We use an individual-based bird biophysical migration model, driven by remotely sensed land surface data, climate and hydrologic data, and biological field observations to study migratory bird responses to environmental change in North America. Simulation allows us to study bird migration across multiple scales and can be linked to mechanistic processes describing the time and energy budget states of migrating birds. We illustrate our approach by simulating the spring migration of pectoral sandpipers from the Gulf of Mexico to Alaska. Mean stopover length and trajectory patterns are consistent with field observations.
Smith, James A.↗