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Data and Scripts Associated with "Modeling Ecohydrological Responses of Vegetation to Urban Microclimates Using the E3SM Land Model"

This dataset supports the study of vegetation ecohydrological responses to urban microclimates using the land component of the Energy Exascale Earth System Model (ELM) at four urban sites in Knoxville, Tennessee, USA. It includes the model inputs, simulation outputs, and associated scripts for running ELM simulations and analyzing the resulting data. The Model_Inputs folder includes static surface data, satellite-derived phenology (i.e., leaf area index), and atmospheric forcing data used to drive ELM simulations. Detailed descriptions of these datasets are provided in Section 2.3.2 of the associated manuscript. The Model_Outputs folder contains simulation results for the baseline, treatment, and ensemble experiments. Outputs from the baseline and treatment simulations are provided as raw ELM NetCDF files. Because the raw outputs from the 4,000-member ensemble are prohibitively large, the ensemble results are provided as summarized CSV files, which also serve as the source data for Figure 5 of the associated manuscript. The Scripts folder contains three components: E3SM, the core codebase of the Energy Exascale Earth System Model (E3SM); elm-olmt, the Offline Land Model Testbed (OLMT) used to perform the simulations; and knoxville_elm, which contains the analysis scripts used to process model outputs and generate the figures and results presented in the associated manuscript. Additional information is provided in Scripts_readme.txt within the Scripts directory.

Lu, Xiaoman [ORNL] (ORCID:0000000306698780)↗

In situ monitoring of H and O stable isotopes in soil water reveals ecohydrologic dynamics in managed soil systems [Urban ecohydrologic dynamics revealed by in situ monitoring of H and O stable isotopes in soil water]

The water cycle in urban and hydrologically managed settings is subject to perturbations that are dynamic on small spatial and temporal scales; the effects of which may be especially profound in soils. We deploy a membrane inlet-based laser spectroscopy system in conjunction with soil moisture and temperature sensors to monitor soil water dynamics and H and O stable isotope ratios (δ 2 H and δ 18 O values) in a seasonally irrigated urban-landscaped garden soil over the course of 9 months between the cessation of irrigation in the autumn and the onset of irrigation through the summer. Here, we find that soil water δ 2 H and δ 18 O values predominately reflect seasonal precipitation and irrigation inputs. A comparison of total soil water by cryogenic extraction and mobile soil water measured by in situ water vapor probes reveals that initial infiltration events after long periods of soil drying (the autumn season in this case) emplace water into the soil matrix that is not easily replaced by, or mixed with, successive pulses of infiltrating soil water. Tree stem xylem water H and O stable isotope composition did not match that of available water sources. Our findings suggest that partitioning of soil water into mobile and immobile “pools” and resulting ecohydrologic separation may occur in engineered and hydrologically managed soils and not be limited to natural settings. Furthermore, the laser spectroscopy method detailed here has potential to yield insights in a variety of critical zone and vadose zone studies, potential that is heightened by the simplicity and portability of the system.

07 ISOTOPE AND RADIATION SOURCES↗

Ecohydrologic separation alters interpreted hydrologic stores and fluxes in a headwater mountain catchment

Recent studies have demonstrated that compartmentalized pools of water preferentially supply either plant transpiration (poorly mobile water) or streamflow and groundwater (highly mobile water) in some catchments, a phenomenon referred to as ecohydrologic separation. Additionally, the omission of processes accounting for ecohydrologic separation in standard applications of hydrological models is expected to influence estimates of water residence times and plant water availability. However, few studies have tested this expectation or investigated how ecohydrologic separation alters interpretations of stores and fluxes of water within a catchment. In this study, we compare two rainfall-runoff models that integrate catchment-scale representations of transport, one that incorporates ecohydrologic separation and one that does not. The models were developed for a second-order watershed at the H.J. Andrews Experimental Forest (Oregon, USA), the site where ecohydrologic separation was first observed, and calibrated against multiple years of stream discharge and chloride concentration. Model structural variations caused mixed results for differences in calibrated parameters and differences in storage between reservoirs. However, large differences in catchment storage volumes and fluxes arise when considering only mobile water. These changes influence interpreted residence times for streamflow-generating water, demonstrating the importance of ecohydrologic separation in catchment-scale water and solute transport.

54 ENVIRONMENTAL SCIENCES↗

Ecohydrological drivers of Neotropical vegetation in montane ecosystems

Montane ecosystems are known for their high numbers of endemic species, unique climate conditions, and wide variety of ecosystem services such as water supply and carbon storage. Although many ecohydrological and climatic studies of montane environments have been carried out in temperate and boreal regions, few have been done in Neotropical regions. Hence, the objective of this review is to synthesize the existing literature on the main factors (biotic and abiotic) that influence vegetation distribution, functional traits, and ecohydrological processes and feedbacks in tropical montane ecosystems and to identify key knowledge gaps. Most of the literature used includes work conducted in Neotropical montane rainforests, cloud forests, and grass/scrublands (e.g., páramos, punas, and campos de altitude/rupestres). Fog is a major climatic attribute in tropical montane habitats. We found that fog regimes (frequency and intensity of fog events) influence both water inputs (i.e., canopy interception and foliar water uptake) and outputs (evapotranspiration) and represent an important driver of local species composition, dominance of plant functional types, and ecological functioning. The stability and conservation of tropical montane ecosystems depends on such ecohydrological fluxes, which are sensitive to increases in air temperature and changing precipitation and fog regimes. Furthermore, to better inform effective conservation and restoration strategies, more work is needed to elucidate how key ecohydrological processes are affected by land use conversion to agriculture and pasture lands, as human activities influence the water budgets in Neotropical montane watersheds not only at regional-scales but also globally.

54 ENVIRONMENTAL SCIENCES↗

Perspectives on Artificial Intelligence for Predictions in Ecohydrology

Abstract In November 2021, the Artificial Intelligence for Earth System Predictability (AI4ESP) workshop was held, which involved hundreds of researchers from dozens of institutions. There were 17 sessions held at the workshop, including one on ecohydrology. The ecohydrology session included various breakout rooms that addressed specific topics, including 1) soils and belowground areas; 2) watersheds; 3) hydrology; 4) ecophysiology and plant hydraulics; 5) ecology; 6) extremes, disturbance and fire, and land-use and land-cover change; and 7) uncertainty quantification methods and techniques. In this paper, we investigate and report on the potential application of artificial intelligence and machine learning in ecohydrology, highlight outcomes of the ecohydrology session at the AI4ESP workshop, and provide visionary perspectives for future research in this area.

54 ENVIRONMENTAL SCIENCES↗

Matching ecohydrological processes and scales of banded vegetation patterns in semiarid catchments

While the claim that water-carbon interactions result in spatially coherent vegetation patterning is rarely disputed in many arid and semiarid regions, the significance of the detailed water pathways and other high frequency variability remain an open question. How the short temporal scale meteorological fluctuations form the long-term spatial variability of available soil water in complex terrains due to the various hydrological, land surface, and vegetation dynamic feedbacks frames the scope of the work here. Knowledge of the detailed mechanistic feedbacks among soil, plants, and the atmosphere will lead to advances in our understanding of plant water availability in arid and semiarid ecosystems and will provide insights for future model development concerning vegetation pattern formation. In this paper, quantitative estimates of water fluxes and vegetation productivity are provided for a semiarid ecosystem with established vegetation bands on hillslopes using numerical simulations. A state-of-the-science process based ecohydrological model is used, which resolves hydrological and plant physiological processes at the relevant space and time scales, for relatively small periods (e.g., decades) of mature ecosystems (i.e., spatially static vegetation distribution). To unfold the mechanisms that shape the spatial distribution of soil moisture, plant productivity and the relevant surface/subsurface and atmospheric water fluxes, idealized hillslope numerical experiments are constructed, where the effects of soil type, slope steepness, and overland flow accumulation area are quantified. Those mechanisms are also simulated in the presence of complex topography features on landscapes. Finally, the main results are (a) short temporal scale meteorological variability and accurate representation of the scales at which each ecohydrological process operates are crucial for the estimation of the spatial variability of soil water availability to the plant root zone; (b) water fluxes such as evapotranspiration, infiltration, runoff-run-on, and subsurface soil water movement have a dynamic short temporal scale behavior that determines the long-term spatial organization of plant soil water availability in ecosystems with established vegetation patterns; and (c) hypotheses concerning the hydrological responses that can lead to vegetation pattern formation have to accommodate realistic and physically based representations of the fast dynamics of key ecohydrological fluxes.

54 ENVIRONMENTAL SCIENCES↗

Ebullition dominates methane fluxes from the water surface across different ecohydrological patches in a temperate freshwater marsh at the end of the growing season

Measurements of the spatial heterogeneity of methane fluxes in wetlands are critical to better understand and predict methane emissions at the ecosystem scale. However, the within-wetland spatial heterogeneity of fluxes is rarely assessed. Here, we use a spatially balanced rapid chamber-based survey of methane at different ecohydrological patches within a temperate freshwater marsh. We measured fluxes exclusively from the water surface without including vegetation. We further used the data from chamber measurements to partition diffusive and ebullitive fluxes. Three ecohydrological patches were distinguishable in the marsh, defined by the type and presence/absence of vegetation. Here, these patches were emergent vegetation, floating-leaved, and open water. Net methane fluxes from the water surface (diffusion plus ebullition) in emergent vegetation patches were larger than in the floating-leaved vegetation and open water patches (p < 0.05). Diffusive fluxes, representing a sizable smaller fraction of net fluxes, were larger in vegetated than in unvegetated patches (p < 0.05), while ebullitive fluxes mirrored the magnitude and differences observed in the net fluxes.Moreover, pooled net and ebullitive fluxes across patches (but not diffusive fluxes) were negatively correlated with water levels, the primary variable affecting patch distribution. Altogether, our results indicate that the differences among ecohydrological patches are driven by ebullition, ultimately highlighting challenges faced by scientists and practitioners in the field and modelers seeking to improve the predictability and resolution of wetland biogeochemical models.

54 ENVIRONMENTAL SCIENCES↗

Ecohydrological modeling in agroecosystems: Examples and challenges

We report that human societies are increasingly altering the water and biogeochemical cycles to both improve ecosystem productivity and reduce risks associated with the unpredictable variability of climatic drivers. These alterations, however, often cause large negative environmental consequences, raising the question as to how societies can ensure a sustainable use of natural resources for the future. Here we discuss how ecohydrological modeling may address these broad questions with special attention to agroecosystems. The challenges related to modeling the two-way interaction between society and environment are illustrated by means of a dynamical model in which soil and water quality supports the growth of human society but is also degraded by excessive pressure, leading to critical transitions and sustained societal growth-collapse cycles. We then focus on the coupled dynamics of soil water and solutes (nutrients or contaminants), emphasizing the modeling challenges, presented by the strong nonlinearities in the soil and plant system and the unpredictable hydroclimatic forcing, that need to be overcome to quantitatively analyze problems of soil water sustainability in both natural and agricultural ecosystems. Finally, we discuss applications of this framework to problems of irrigation, soil salinization, and fertilization and emphasize how optimal solutions for large-scale, long-term planning of soil and water resources in agroecosystems under uncertainty could be provided by methods from stochastic control, informed by physically and mathematically sound descriptions of ecohydrological and biogeochemical interactions.

54 ENVIRONMENTAL SCIENCES↗

Ecohydrological controls on grass and shrub above‐ground net primary productivity in a seasonally dry climate

Abstract Seasonally dry, water‐limited regions are often co‐dominated by distinct herbaceous and woody plant communities with contrasting ecohydrological properties. We investigated the shape of the above‐ground net primary productivity (ANPP) response to annual precipitation ( P a ) for adjacent grassland and shrubland ecosystems in Southern California, with the goal of understanding the role of these ecohydrological properties on ecosystem function. Our synthesis of observations and modelling demonstrates grassland and shrubland exhibit distinct ANPP‐ P a responses that correspond with characteristics of the long‐term P a distribution and mean water balance fluxes. For annual grassland, no ANPP occurs below a ‘precipitation compensation point,’ where bare soil evaporation dominates the water balance, and ANPP saturates above the P a where deep percolation and runoff contribute to the modelled water balance. For shrubs, ANPP increases at a lower and relatively constant rate across the P a gradient, while deep percolation and runoff account for a smaller fraction of the modelled water balance. We identify precipitation seasonality, root depth, and water stress sensitivity as the main ecosystem properties controlling these responses. Observed ANPP‐ P a responses correspond to notably different patterns of rain‐use efficiency (RUE). Grass RUE exceeds shrub RUE over a wide range of typical P a values, whereas grasses and shrubs achieve a similar RUE in particularly dry or wet years. Inter‐annual precipitation variability, and the concomitant effect on ANPP, plays a critical role in maintaining the balance of grass and shrub cover and ecosystem‐scale productivity across this landscape. Copyright © 2015 John Wiley & Sons, Ltd.

Parolari, Anthony J.↗

Synthesizing models useful for ecohydrology and ecohydraulic approaches: An emphasis on integrating models to address complex research questions

Ecohydrology combines empiricism, data analytics, and the integration of models to characterize linkages between ecological and hydrological processes. A challenge for practitioners is determining which models best generalizes heterogeneity in hydrological behaviour, including water fluxes across spatial and temporal scales, integrating environmental and socio–economic activities to determine best watershed management practices and data requirements. We conducted a literature review and synthesis of hydrologic, hydraulic, water quality, and ecological models designed for solving interdisciplinary questions. We reviewed 1,275 papers and identified 178 models that have the capacity to answer an array of research questions about ecohydrology or ecohydraulics. Of these models, 43 were commonly applied due to their versatility, accessibility, user–friendliness, and excellent user–support. Forty–one of 43 reviewed models were linked to at least 1 other model especially: Water Quality Analysis Simulation Program (linked to 21 other models), Soil and Water Assessment Tool (19), and Hydrologic Engineering Center's River Analysis System (15). However, model integration was still relatively infrequent. There was substantial variation in model applications, possibly an artefact of the regional focus of research questions, simplicity of use, quality of user–support efforts, or a limited understanding of model applicability. Simply increasing the interoperability of model platforms, transformation of models to user–friendly forms, increasing user–support, defining the reliability and risk associated with model results, and increasing awareness of model applicability may promote increased use of models across subdisciplines. Furthermore, the current availability of models allows an array of interdisciplinary questions to be addressed, and model choice relates to several factors including research objective, model complexity, ability to link to other models, and interface choice.

54 ENVIRONMENTAL SCIENCES↗

Regional patterns in hydrologic response, a new three-component metric for hydrograph analysis and implications for ecohydrology, Northwest Volcanic Aquifer Study Area, USA

Spatial patterns of hydrologic response were examined for the Northwest Volcanic Aquifer Study Area (NVASA). The utility of established hydrograph-separation methods for assessing hydrologic response in permeable volcanic terranes was assessed and a new three-component metric for hydrograph analysis was developed. The new metric, which partitions streamflow into subcomponents defined by the timescales of hydrologic response (e.g., fast-runoff, intermediate-interflow and slow-baseflow), was used to gain a fundamental understanding of the regional hydrology, investigate sub-regional differences, influencing factors, and ecohydrological implications. The combined effects of NVASA’s physiography, climate and geology create a strongly coupled surface-groundwater system that produces copious baseflow and limited quantities of runoff and interflow. Patterns of hydrologic response are influenced by the type and rate of precipitation and permeability of the underlying geology. Under variable precipitation conditions the hydrologic response of volcanic terranes with similar permeability and subsurface-storage capacity can be significantly different. From a water management and ecohydrology perspective, understanding regional patterns of hydrologic response and sub-regional differences is fundamental. Results indicate that minimum-flow methods provide the most conservative estimate of baseflow and may be the most robust for filtering out snowmelt bias in baseflow estimates. Baseflow contributes ~75% of the perennial streamflow across the NVASA and represents a critical component of the regional water supply that provides critical cold-water habitat.

54 ENVIRONMENTAL SCIENCES↗

Ecohydrological decoupling under changing disturbances and climate

Terrestrial disturbances are increasing in frequency and severity, perturbing the hydrologic cycle by altering vegetation-mediated water use and microclimate. Changes in the hydrological cycle alter vegetation succession, which is additionally influenced by changing climate and atmospheric CO 2 . Here, the interacting drivers and feedbacks between disturbances, climate, and vegetation cause uncertainty regarding the sustainable provision of freshwater through streamflow. Here we synthesize the literature on post-disturbance ecohydrological coupling, in particular, including the mechanistic relationship between vegetation and streamflow, under changing disturbance regimes, atmospheric CO 2 , and climate. Disturbance can cause decoupling between transpiration and streamflow by altering the connectivity, size, availability, and spatial distribution of their source pools. Decoupling increases when soil moisture is low due to reduced connectivity, and when soil moisture is high and Q and T are independent. Successional trajectories regulate the physiological and physical features influencing influence the dynamics of source water partitioning. Changing climate and disturbance regimes can alter succession and prolong decoupling, with potential moderation by CO 2 . Increasing rates, severity, and spread of disturbances along with warming could promote greater decoupling globally. From this review emerges a framework of testable hypotheses that identify the critical processes regulating ecohydrological coupling and provides a roadmap for future research. Accurate prediction of post-disturbance coupling and subsequent water availability for human consumption requires understanding the degree of hydraulic connectivity between source water pools for transpiration and streamflow and their response to succession under changing disturbance and climate regimes.

54 ENVIRONMENTAL SCIENCES↗

FRAMES Metadata Reporting Templates for Ecohydrological Observations, version 1.1

FRAMES is a a set of Excel metadata files and package-level descriptive metadata that are designed to facilitate and improve capture of desired metadata for ecohydrological observations. The metadata are bundled with data files into a data package and submitted to a data repository (e.g. the NGEE Tropics Data Repository) via a web form. FRAMES standardizes reporting of diverse ecohydrological and biogeochemical data for synthesis across a range of spatiotemporal scales and incorporates many best data science practices. This version of FRAMES supports observations for primarily automated measurements collected by permanently located sensors, including sap flow (tree water use), leaf surface temperature, soil water content, dendrometry (stem diameter growth increment), and solar radiation. Version 1.1 extend the controlled vocabulary and incorporates functionality to facilitate programmatic use of data and FRAMES metadata (R code available at NGEE Tropics Data Repository).

54 ENVIRONMENTAL SCIENCES↗

Ecohydrology of urban environments

Urban watersheds include a gradient of highly managed to unmanaged ecosystems that vary in vegetation cover, built and natural drainage systems, and impervious cover. A distinct difference to undeveloped ecosystems is the dominance of material and energy import and export, the disruption of natural catenae, the covariation of soils, terrain and canopy conditions. In this chapter, we discuss the distinct characteristics of urban ecohydrology compared to non-urban systems. We also investigate emergent principles of unmanaged watersheds that underscore the promotion of ecohydrological resilience, and the need to abstract and adapt these principles to support the goal-oriented restoration of impaired urban ecosystems.

42 ENGINEERING↗

Benchmarking soil moisture and its relationship to ecohydrologic variables in Earth System Models

Soil moisture (SM) is a key regulator of ecosystem biogeophysics, influencing plant water relations and land-atmosphere energy exchanges. We evaluate the representation of SM in 16 Earth System Models from the Coupled Model Intercomparison Project Phase 6 (CMIP6) using the International Land Model Benchmarking (ILAMB) framework, focusing on surface (0–5, 0–10 cm) and rootzone (0–100 cm) depths, as well as key ecohydrological variables like gross primary productivity (GPP), leaf area index (LAI), and evapotranspiration (ET), and their coupling. Models are benchmarked against multiple observational and assimilated datasets to assess both state variables and cross-variable relationships. Surface SM is generally well represented (r > 0.87), while rootzone SM variability is systematically overestimated (normalized standard deviation > 1). ET shows strong agreement with observations (r > 0.9), whereas GPP and LAI exhibit larger inter-model spread. Skill in individual variables does not guarantee realistic SM–ecohydrology coupling, which varies strongly across models and depends on the reference dataset. Köppen-based regional analyses reveal strong regime dependence, with several models performing well in Tropical and Temperate regions but degrading in Continental (high-latitude) zones. Across both global and regional benchmarks, models cluster by land surface framework, indicating that structural choices in soil hydrology and soil–plant coupling exert a first-order control on performance. These results provide process-relevant benchmarks and suggest that improving the representation of vertical soil structure, rooting depth distributions, and soil–plant hydraulic coupling will be central to advancing soil moisture realism in next-generation Earth system models.

CMIP6↗

Using Diel Solute Signals to Assess Ecohydrological Processing in Lotic Systems

Lotic systems are a prominent ecohydrological interface within which complex, coupled interactions occur between ecological, hydrological, and geochemical processes. This chapter reviews the ecological processes driving diel signals in oxygen as well as major nutrients and other trace elements. It discusses how diel signals can be used to evaluate functioning and interactions within stream ecosystems. The chapter considers potential future research directions and outstanding questions still to be addressed by or about diel solute signals and associated processes. High-resolution sensor-based time series and associated tools and conceptual advances are being integrated into environmental management. Quantitative tools to disentangle diel biogeochemically-driven signals from other sources of variability in continuous time series are growing. Theoretical models of diel process dynamics are helping to spur hypothesis generation and new ways of approaching diel signals in lotic systems.

Kurz, Marie↗

Ecohydrology of wetland plant communities along an estuarine to tidal river gradient

Abiotic filters that interact with wetland plant communities along tidal–fluvial gradients are highly dynamic, and understanding their quantitative thresholds and relationships to interspecific competition is important during an era of sea-level rise and watershed hydrologic change. Yet, landscape-scale studies of major coastal rivers from the river mouth to the head of tide, such as this study, remain rare. Here, we develop a new predictive framework for estuarine–tidal river research and management using a river-specific low-water datum and the wetland inundation indicator SEVg, the growing-season sum exceedance value of hourly surface-water depth. The distribution and variability of the wetland species pool (n = 203) on the 234 river kilometer (rkm) lower Columbia River and estuary floodplain are described for the first time. 4,940 quadrats at 50 marshes were surveyed (2005–2016). Throughout the estuarine–tidal river system, SEVg was well suited to describe the wetland inundation regime and its variability based on the combination of longitudinal river position and elevation. SEVg increased significantly landward. Two primary wetland inundation regimes were identified: the seaward-tidal, usually greatest during the winter months, and landward-fluvial, greatest during the growing season. Nearest the ocean, salinity is the abiotic factor limiting species richness and non-native species. Farther upriver, the daily, seasonal, and interannual variability of the wetting and drying cycle encourage disturbance-tolerant species and non-natives and limit the number of hydrophytes and total vegetative cover. Hence, the average between-year similarity of site-scale areal cover significantly decreased landward. Hierarchical cluster analysis indicated five vegetative groups and five ecohydrologic zones between rkm 0 and 234 were discriminated with 76 significant species–zone associations. All zones had unique indicator species. Species with high indicator values were Carex lyngbyei throughout the estuarine zones, and Eleocharis palustris, Sagittaria latifolia, and the invasive non-native Phalaris arundinacea in the upper estuarine and lower, middle, and upper tidal river zones (IV > 0.90). Competition from C. lyngbyei nearest the ocean and P. arundinacea in the tidal river was associated with reduced species richness when total cover was >65%. This framework of filters informs the design and prediction of future wetland plant communities on coastal river floodplains.

54 ENVIRONMENTAL SCIENCES↗

Impacts of Riparian and Non-riparian Woody Encroachment on Tallgrass Prairie Ecohydrology

Woody encroachment has impacted grassland ecohydrology worldwide, prompting management strategies aimed at woody vegetation removal to prevent or mitigate loss of water yield. For this work, we measured stream discharge following sustained cutting of riparian trees (2010–2020) in a native tallgrass prairie (northeastern Kansas, USA). Discharge has declined at this site since the 1980’s despite a concurrent increase in precipitation. This decline has been previously attributed to increased transpiration of stream water by riparian vegetation. We used water stable isotopes (δ 18 O and δ 2 H) to determine whether riparian grasses, shrubs, and trees primarily used stream/groundwater or soil water. Additionally, we quantified the increase in riparian and non-riparian woody cover (1978–2020) and combined it with sap-flux data to estimate changes in transpirative water loss. Sustained cutting of riparian trees did not result in increased discharge. Rather than stream/groundwater, the largest proportion of water used by riparian trees (Quercus spp.) was deep soil water. Cornus drummondii (clonal woody shrub) used a higher proportion of stream water and had greater overall variability in water-use. Riparian shrub cover increased about 57% from 1978 to 2020. Over the same time period, shrub cover increased about 20% in areas outside the riparian zone, resulting in an estimated 25% increase in daily transpirative water loss. Although stream water use was less than 50% for all riparian zone species, the total increase in shrub cover on this watershed, coupled with higher transpiration rates of shrubs, suggests that these woody species—within and outside the riparian zone—are key contributors to observed declines in stream flow in this system.

54 ENVIRONMENTAL SCIENCES↗