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At least 19 records

Coordinate transformation and construction of finite element mesh in a diverted tokamak geometry

A coordinate transformation technique between straight magnetic field line coordinate system (Ψ, θ) and Cartesian coordinate system (R, Z) is presented employing a Solov'ev solution of the Grad-Shafranov equation. Employing the equilibrium solution, the poloidal magnetic flux Ψ(R, Z) of a diverted tokamak, magnetic field line equation is solved computationally to find curves of constant poloidal angle θ, which provides us with explicit relations R = R(Ψ, θ) and Z = Z(Ψ, θ). Correspondingly, conversion from one coordinate to the other along particle trajectories in the vicinity of separatrix is demonstrated. Based on the magnetic structure, a finite element mesh is generated in a diverted tokamak geometry to solve Poisson's equation.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Pitch-Angle Diffusion in the Earth’s Magnetosphere Organized by the Mozer-Transformed Coordinate System

In the Earth’s dipole magnetosphere finite-gyroradius effects produce a shift of the atmospheric loss cone away from the direction of the magnetic field. This loss-cone shift is theoretically described by the “Mozer transform”, which is based upon the curvature drift of particles crossing the equatorial plane. For positive ions the northern and southern loss cones both shift westward and for electrons the northern and southern loss cones both shift eastward. This loss-cone shift is part of a coordinate-system transform, with the transformed coordinates better organizing the behavior of particle orbits in the dipole magnetic field (e.g. first adiabatic invariants, mirror heights, and bounce times). In this report it is demonstrated that the transformed coordinate system also properly organizes pitch-angle diffusion. This improved organization of the diffusion is true whether the angular scattering is produced by plasma-wave scattering or by field-line-curvature (FLC) scattering. It is shown that FLC scattering and the loss cone shift are linked, so that if FLC scattering is occurring, there is a loss cone shifted away from the magnetic-field direction and the Mozer-transformed coordinates are needed.

79 ASTRONOMY AND ASTROPHYSICS↗

General approaches for shear-correcting coordinate transformations in Bragg coherent diffraction imaging. Part I

This two-part article series provides a generalized description of the scattering geometry of Bragg coherent diffraction imaging (BCDI) experiments, the shear distortion effects inherent in the 3D image obtained from presently used methods and strategies to mitigate this distortion. Part I starts from fundamental considerations to present the general real-space coordinate transformation required to correct this shear, in a compact operator formulation that easily lends itself to implementation with available software packages. Such a transformation, applied as a final post-processing step following phase retrieval, is crucial for arriving at an undistorted, correctly oriented and physically meaningful image of the 3D crystalline scatterer. As the relevance of BCDI grows in the field of materials characterization, the available sparse literature that addresses the geometric theory of BCDI and the subsequent analysis methods are generalized here. This geometrical aspect, specific to coherent Bragg diffraction and absent in 2D transmission CDI experiments, gains particular importance when it comes to spatially resolved characterization of 3D crystalline materials in a reliable nondestructive manner. This series of articles describes this theory, from the diffraction in Bragg geometry to the corrections needed to obtain a properly rendered digital image of the 3D scatterer. Part I of this series provides the experimental BCDI community with the general form of the 3D real-space distortions in the phase-retrieved object, along with the necessary post-retrieval correction method. Part II builds upon the geometric theory developed in Part I with the formalism to correct the shear distortions directly on an orthogonal grid within the phase-retrieval algorithm itself, allowing more physically realistic constraints to be applied. Taken together, Parts I and II provide the X-ray science community with a set of generalized BCDI shear-correction techniques crucial to the final rendering of a 3D crystalline scatterer and for the development of new BCDI methods and experiments.

36 MATERIALS SCIENCE↗

CurvilinearGrids.jl: A Julia package for curvilinear coordinate transformations

Finite-difference discretizations of partial differential equations are widespread throughout the scientific community. Oftentimes finite-differences are used to compute spatial gradients of fields on a discrete grid, which is typically a uniform or rectilinear Cartesian mesh. Arbitrary multidimensional geometry is difficult to discretize directly with finite differences, however, due to non-uniform grid spacing and non-orthogonality. Curvilinear coordinate transformations can be used as a strategy to enable arbitrary geometry. While these curvilinear transformations are straightforward, the governing PDEs require additional terms (metrics) and must adhere to strict conservation laws; these criteria complicate the application of the transformation and require careful implementation.

97 MATHEMATICS AND COMPUTING↗

Coordinate transformation methodology for simulating quasistatic elastoplastic solids

Molecular dynamics simulations frequently employ periodic boundary conditions where the positions of the periodic images are manipulated in order to apply deformation to the material sample. For example, Lees-Edwards conditions use moving periodic images to apply simple shear. Here, we examine the problem of precisely comparing this type of simulation to continuum solid mechanics. We employ a hypo-elastoplastic mechanical model, and develop a projection method to enforce quasi-static equilibrium. We introduce a simulation framework that uses a fixed Cartesian computational grid on a reference domain, and imposes deformation via a time-dependent coordinate transformation to the physical domain. As a test case for our method, we consider the evolution of shear bands in a bulk metallic glass using the shear transformation zone theory of amorphous plasticity. We examine the growth of shear bands in simple shear and pure shear conditions as a function of the initial preparation of the bulk metallic glass.

74 ATOMIC AND MOLECULAR PHYSICS↗

Coordinate Transformations

This whitepaper provides details for the background, conventions, definitions, transformation equations, examples, and implementation used in the Solid Body Geometry (SBG) transformations in Monte Carlo Application ToolKit (MCATK).

97 MATHEMATICS AND COMPUTING↗

General approaches for shear-correcting coordinate transformations in Bragg coherent diffraction imaging. Part II

X-ray Bragg coherent diffraction imaging (BCDI) has been demonstrated as a powerful 3D microscopy approach for the investigation of sub-micrometre-scale crystalline particles. The approach is based on the measurement of a series of coherent Bragg diffraction intensity patterns that are numerically inverted to retrieve an image of the spatial distribution of the relative phase and amplitude of the Bragg structure factor of the diffracting sample. This 3D information, which is collected through an angular rotation of the sample, is necessarily obtained in a non-orthogonal frame in Fourier space that must be eventually reconciled. To deal with this, the approach currently favored by practitioners (detailed in Part I) is to perform the entire inversion in conjugate non-orthogonal real- and Fourier-space frames, and to transform the 3D sample image into an orthogonal frame as a post-processing step for result analysis. In this article, which is a direct follow-up of Part I, two different transformation strategies are demonstrated, which enable the entire inversion procedure of the measured data set to be performed in an orthogonal frame. The new approaches described here build mathematical and numerical frameworks that apply to the cases of evenly and non-evenly sampled data along the direction of sample rotation ( i.e. the rocking curve). The value of these methods is that they rely on the experimental geometry, and they incorporate significantly more information about that geometry into the design of the phase-retrieval Fourier transformation than the strategy presented in Part I. Finally, two important outcomes are (1) that the resulting sample image is correctly interpreted in a shear-free frame and (2) physically realistic constraints of BCDI phase retrieval that are difficult to implement with current methods are easily incorporated. Computing scripts are also given to aid readers in the implementation of the proposed formalisms.

36 MATERIALS SCIENCE↗

An Efficient Power Flexibility Aggregation Framework via Coordinate Transformation and Chebyshev Centering Optimization

The large-scale integration of distributed energy resources (DERs) converts the role of a distribution system from a customer to a prosumer. In this context, the controllable DERs are expected to provide capacity support for the transmission system, which can be considered as power flexibility aggregation. Specifically, it is a process of controlling the power output of DERs to fulfill the desired capacity or flexibility. However, the power output of DERs as control variables is redundant. That is, a power flexibility command can be realized by multiple dispatch alternatives, which may hinder efficient design of control rules and flexibility evaluation schemes. Therefore, this paper introduces a conception of the artificial power flexibility controller to avoid the redundancy issue, which is a converted control variable after reconstructing the DER power region. Through this reconstruction, the DERs can be indirectly controlled by the proposed artificial power flexibility controller. In addition, a Chebyshev centering optimization model is developed to approximate the power flexibility region. At last, the proposed method is verified on an artificially-designed network with multiple DERs.

Chebyshev centering optimization↗

Domain Knowledge Guided Bayesian Optimization For Autonomous Alignment Of Complex Scientific Instruments

Bayesian Optimization (BO) is a powerful tool for optimizing complex non-linear systems. However, its performance degrades in high-dimensional problems with tightly coupled parameters and highly asymmetric objective landscapes, where rewards are sparse. In such needle-in-a-haystack scenarios, even advanced methods like trust-region BO (TurBO) often lead to unsatisfactory results. We propose a domain knowledge guided Bayesian Optimization approach, which leverages physical insight to fundamentally simplify the search problem by transforming coordinates to decouple input features and align the active subspaces with the primary search axes. We demonstrate this approach's efficacy on a challenging 12-dimensional, 6-crystal Split-and-Delay optical system, where conventional approaches, including standard BO, TuRBO and multi-objective BO, consistently led to unsatisfactory results. When combined with an reverse annealing exploration strategy, this approach reliably converges to the global optimum. The coordinate transformation itself is the key to this success, significantly accelerating the search by aligning input co-ordinate axes with the problem's active subspaces. As increasingly complex scientific instruments, from large telescopes to new spectrometers at X-ray Free Electron Lasers are deployed, the demand for robust high-dimensional optimization grows. Our results demonstrate a generalizable paradigm: leveraging physical insight to transform high-dimensional, coupled optimization problems into simpler representations can enable rapid and robust automated tuning for consistent high performance while still retaining current optimization algorithms.

FOS: Computer and information sciences↗

Impact of transforming to conformal Fermi coordinates on quasisingle field non-Gaussianity

In general relativity, predictions for observable quantities can be expressed in a coordinate independent way. Nonetheless it may be inconvenient to do so. Using a particular frame may be the easiest way to connect theoretical predictions to measurable quantities. For the cosmological curvature bispectrum such frame is described by the conformal Fermi coordinates. In single field inflation it was shown that going to this frame cancels the squeezed limit of the density perturbation bispectrum calculated in global coordinates. Furthermore, we explore this issue in quasisingle field inflation when the curvaton mass and the curvaton-inflaton mixing are small. In this case, the contribution to the bispectrum from the coordinate transformation to conformal Fermi coordinates is of the same order as that from the inflaton-curvaton interaction term but does not cancel it.

79 ASTRONOMY AND ASTROPHYSICS↗

Lorentz Symmetry Group, Retardation, Intergalactic Mass Depletion and Mechanisms Leading to Galactic Rotation Curves

The general theory of relativity (GR) is symmetric under smooth coordinate transformations, also known as diffeomorphisms. The general coordinate transformation group has a linear subgroup denoted as the Lorentz group of symmetry, which is also maintained in the weak field approximation to GR. The dominant operator in the weak field equation of GR is thus the d’Alembert (wave) operator, which has a retarded potential solution. Galaxies are huge physical systems with dimensions of many tens of thousands of light years. Thus, any change at the galactic center will be noticed at the rim only tens of thousands of years later. Those retardation effects are neglected in the present day galactic modelling used to calculate rotational velocities of matter in the rims of the galaxy and surrounding gas. The significant differences between the predictions of Newtonian instantaneous action at a distance and observed velocities are usually explained by either assuming dark matter or by modifying the laws of gravity (MOND). In this paper, we will show that, by taking general relativity seriously without neglecting retardation effects, one can explain the radial velocities of galactic matter in the M33 galaxy without postulating dark matter. It should be stressed that the current approach does not require that velocities v are high; in fact, the vast majority of galactic bodies (stars, gas) are substantially subluminal—in other words, the ratio of $\frac{v}{c} \ll 1$. Typical velocities in galaxies are 100 km/s, which makes this ratio 0.001 or smaller. However, one should consider the fact that every gravitational system, even if it is made of subluminal bodies, has a retardation distance, beyond which the retardation effect cannot be neglected. Every natural system, such as stars and galaxies and even galactic clusters, exchanges mass with its environment, for example, the sun loses mass through solar wind and galaxies accrete gas from the intergalactic medium. This means that all natural gravitational systems have a finite retardation distance. The question is thus quantitative: how large is the retardation distance? For the M33 galaxy, the velocity curve indicates that the retardation effects cannot be neglected beyond a certain distance, which was calculated to be roughly 14,000 light years; similar analysis for other galaxies of different types has shown similar results. We demonstrate, using a detailed model, that this does not require a high velocity of gas or stars in or out of the galaxy and is perfectly consistent with the current observational knowledge of galactic and extra galactic material content and dynamics

79 ASTRONOMY AND ASTROPHYSICS↗