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Leveraging the 2024 Solar Eclipse to Enhance Science Learning through Citizen Science

The solar eclipse on April 8, 2024, provided a rare and compelling opportunity for educators and students to engage in hands-on citizen science. Two NASA Science Activation projects GLOBE Mission Earth (GME) and NASA Earth Science Education Collaborative (NESEC) partnered together to provide a unique professional development experience for educators interested in the eclipse. They invited educators to participate in a specialized 5-week online workshop designed to engage the educators in Global Learning and Observations to Benefit the Environment (GLOBE) citizen science about the eclipse. The workshop was designed to support their certification as GLOBE educators and develop their knowledge, skills, and confidence in conducting a GLOBE investigation. Over 60 educators from across the United States took part in this workshop, which focused on investigating the eclipse by collecting and analyzing atmospheric data. The GLOBE Program promotes environmental and scientific literacy by enabling participants to collect Earth science data and contribute it to a global database accessible for research. The 2024 GLOBE Eclipse workshop trained educators in specific GLOBE protocols—Clouds, Air Temperature, and Surface Temperature—using the GLOBE Eclipse tool integrated into the GLOBE Observer app. This training was supplemented with guidance on engaging students in authentic scientific research and creating research posters to present their findings. The workshop aimed to enhance educators’ skills and confidence in integrating GLOBE protocols into their teaching practices. It addressed several key areas outlined in the National Academies' report on Learning through Citizen Science, including scientific context, nature of participation, and project infrastructure. Educators learned about the atmospheric effects of solar eclipses and were trained to use scientific tools and data analysis methods relevant to their research. They also engaged in live sessions and asynchronous activities, practicing data collection and analysis with real-time feedback. Survey results from the workshop highlighted that participants were primarily motivated by the desire to better use data in their classrooms and improve their proficiency with the GLOBE Observer app. Post-workshop evaluations showed significant increases in educators' confidence regarding their ability to conduct and guide scientific research. Participants reported feeling well-prepared to use the GLOBE Observer app for data collection and were successful in integrating their eclipse observations into classroom activities. Participants also valued the opportunity to contribute to authentic science through GLOBE, which involved observing atmospheric changes such as air temperature fluctuations and cloud cover alterations during the eclipse. The success of the workshop is evident in the increased confidence and skill levels of educators, as well as the publication of research posters on the GLOBE Mission Earth Student Research webpage.This session will discuss how the GLOBE Eclipse workshop series effectively utilized the unique context of the solar eclipse to enhance science education through citizen science. By adhering to the principles outlined in the Learning through Citizen Science framework, the workshop successfully engaged educators and students in meaningful scientific practices, demonstrating the potential of citizen science to enrich science education and foster a deeper understanding of Earth systems.

Jessica Taylor↗
NASA NTRS2017

Framework for Processing Citizens Science Data for Applications to NASA Earth Science Missions

Citizen science (or crowdsourcing) has drawn much high-level recent and ongoing interest and support. It is poised to be applied, beyond the by-now fairly familiar use of, e.g., Twitter for natural hazards monitoring, to science research, such as augmenting the validation of NASA earth science mission data. This interest and support is seen in the 2014 National Plan for Civil Earth Observations, the 2015 White House forum on citizen science and crowdsourcing, the ongoing Senate Bill 2013 (Crowdsourcing and Citizen Science Act of 2015), the recent (August 2016) Open Geospatial Consortium (OGC) call for public participation in its newly-established Citizen Science Domain Working Group, and NASA's initiation of a new Citizen Science for Earth Systems Program (along with its first citizen science-focused solicitation for proposals). Over the past several years, we have been exploring the feasibility of extracting from the Twitter data stream useful information for application to NASA precipitation research, with both "passive" and "active" participation by the twitterers. The Twitter database, which recently passed its tenth anniversary, is potentially a rich source of real-time and historical global information for science applications. The time-varying set of "precipitation" tweets can be thought of as an organic network of rain gauges, potentially providing a widespread view of precipitation occurrence. The validation of satellite precipitation estimates is challenging, because many regions lack data or access to data, especially outside of the U.S. and in remote and developing areas. Mining the Twitter stream could augment these validation programs and, potentially, help tune existing algorithms. Our ongoing work, though exploratory, has resulted in key components for processing and managing tweets, including the capabilities to filter the Twitter stream in real time, to extract location information, to filter for exact phrases, and to plot tweet distributions. The key step is to process the "precipitation" tweets to be compatible with satellite-retrieved precipitation data. These key components for processing and managing "precipitation" tweets (and additional ones to be developed) are not limited to precipitation, nor are they limited to the Twitter social medium. Indeed, to maximize the value of our work for NASA earth science programs, these components should be generalized and be part of an overall framework for processing citizen science data for science research. In this paper, we outline such a framework.

earth science satellite data↗
NASA NTRS2021

Going Beyond Hooked Participants: The Nibble- and-Drop Framework for Classifying Citizen Science Participation

Many citizen science (CS) programs aim to grow and sustain a pool of enthusiastic participants who consistently contribute their efforts to a specific scientific endeavor. Consequently, much research has explored CS participants’ motivations and their relationship to participant recruitment and retention. However, much of this research has focused on actively participating citizen scientists. If researchers want to elucidate the relationship between participant factors (such as demographics and motivations) and participant retention, it is necessary to develop a more comprehensive picture of the different degrees of participation in CS. This paper presents a framework for classifying participation throughout the participant’s engagement in a CS project/program. We suggest a CS participation model that captures the dynamic nature of participation across an arc of volunteering. Called the Nibble-and-Drop Framework, the model describes multiple exit points and stages of contribution typical of participation in a CS program. Applying the framework to the NASA GLOBE Observer (GO) CS program, we found that it captured the dynamics of participation in a global-scale, mobile, app-based, contributory style CS project. The framework guided our analysis of how different participant factors correlate with degrees of participation. We found that participants were motivated to initially participate because they wanted to contribute to NASA research and science. Participants who dropped out of the program at various points often initially engaged through specific collection events and did not feel the need to continue contributing beyond the event; other drop-outs doubted whether their contributions were meaningful, showing again the need to ensure that participants understand the value of their engagement in a CS project.

Heather Fischer↗
DOE OSTI2023

Agile collaboration: Citizen science as a transdisciplinary approach to heliophysics

Citizen science connects scientists with the public to enable discovery, engaging broad audiences across the world. There are many attributes that make citizen science an asset to the field of heliophysics, including agile collaboration. Agility is the extent to which a person, group of people, technology, or project can work efficiently, pivot, and adapt to adversity. Citizen scientists are agile; they are adaptable and responsive. Citizen science projects and their underlying technology platforms are also agile in the software development sense, by utilizing beta testing and short timeframes to pivot in response to community needs. As they capture scientifically valuable data, citizen scientists can bring expertise from other fields to scientific teams. The impact of citizen science projects and communities means citizen scientists are a bridge between scientists and the public, facilitating the exchange of information. These attributes of citizen scientists form the framework of agile collaboration. In this paper, we contextualize agile collaboration primarily for aurora chasers, a group of citizen scientists actively engaged in projects and independent data gathering. Nevertheless, these insights scale across other domains and projects. Citizen science is an emerging yet proven way of enhancing the current research landscape. To tackle the next-generation’s biggest research problems, agile collaboration with citizen scientists will become necessary.

79 ASTRONOMY AND ASTROPHYSICS↗
NASA NTRS2020

NASA ESDS Citizen Science Data Working Group

This document provides guidelines for legal, policy, and ethical issues; standards for citizen science data collection and management; information on ensuring usability of citizen science data and communication regarding its use; and best practices for long-term archival of citizen science data.Section1 contains a detailed discussion of policy, ethical, and legal considerations influencing citizen science data collection. Section 2 considers standards for documentation, including documentation of instrumentation, procedures, and the data itself. It concludes with a discussion of how citizen science data should be attributed. Section 3 provides guidance about how to ensure citizen science data are collected and stored in a useable way. It also considers how NASA and data producers should notify the scientific community, including citizen scientists and the public, about citizen science datasets and the scientific conclusions reached using them. Finally, Section 4 provides detailed information regarding what should be archived from projects using a citizen science approach, including data and code. It provides guidance about archive location, process, and timeframe, as well as information about data access and distribution services provided by NASA that may be relevant to data producers working with citizen scientists.

Citizen Science↗
DOE OSTI2016

Citizen Science: Potential New Opportunity for Consent-Based Siting Processes - 16608

Citizen science is a global phenomenon, as millions of volunteers are collecting, analyzing, and sharing data that contribute to scientific knowledge. Recognizing its potential, the U.S. 2013 Open Government National Action Plan encouraged Federal agencies to harness American ingenuity toward helping address a broad range of scientific and societal challenges, specifically invoking crowd-sourcing and citizen science. The October 2015 Plan reinforced this charge, calling on agencies to increase public participation through both means. Thus, citizen science opportunities are actively being sought across a wide range of Federal programs. Meanwhile, all nations with commercial nuclear reactors face the challenge of managing the spent nuclear fuel and high-level radioactive waste produced. Consent-based siting of facilities to manage these materials is considered an essential aspect of this shared challenge. A variety of other agency programs have illustrated the role citizens can play in strengthening engagement, empowerment, and scientific research. With these same themes important to planning for nuclear waste management, citizen science could represent a potential new opportunity for this national effort. Online resources were investigated to understand the nature and range of citizen science projects and seek insights for possible new applications. Results show that volunteers are contributing to research in areas from archaeology to zoology, and extending from the ocean floor to outer space. A large number of the collaborations involve characterizing local environmental conditions and monitoring changes over time. This paper highlights insights from several projects that illustrate the contributions citizen scientists can make to advance scientific knowledge and assist national and international programs. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗
NASA NTRS2022

Characterizing Student-Driven Research Investigations Contributed to the GLOBE Program Citizen Science Initiative in a Formal Education Context

The Global Learning and Observations to Benefit the Environment (GLOBE) Program offers citizen science opportunities to participants of all ages, with a focus on youth in formal classroom contexts. This study uses student investigation research reports and posters submitted to the 2018 International Virtual Science Symposium (IVSS) and Student Research Symposium (SRS) as testbeds for characterizing student-driven Earth system citizen science investigations. Secondarily, this study aimed to capture GLOBE’s alignment to existing citizen science outcomes frameworks in the literature, which have primarily focused on adults and non-formal settings. Based on a literature review, the evaluation team identified 89 potential characteristics in 27 categories to typify investigations from both formal education and citizen science perspectives. We coded the artifacts from 207 student projects, conducted quantitative analysis of frequencies, and performed a semantic network analysis. By using this networking approach, we conceptually mapped several clusters of co-occurring characteristics, defining a descriptive framework for GLOBE projects. We identified three tiers of citizen science projects, increasing in the sophistication of participants’ demonstrated science practices. The framework includes additional components that reflect student citizen scientists’ thoughtfulness and connection to context as well as their projects’ reflection of their motivation and self efficacy. Through these findings, we have identified areas where student citizen scientists would benefit from further support, and suggest here further research to incorporate the experiences of students into the broader understanding of citizen science outcomes.

network analysis↗
NASA NTRS2020

Clouds Around the World: How a Simple Citizen Science Data Challenge Became a Worldwide Success

Citizen science is often recognized for its potential to directly engage the public in science, and is uniquely positioned to support and extend participants’ learning in science. In March 2018, the Global Learning and Observations to Benefit the Environment (GLOBE) Program, NASA’s largest and longest-lasting citizen science program about Earth, organized a month-long event that asked people around the world to contribute daily cloud observations and photographs of the sky (15 March–15 April 2018). What was considered a simple engagement activity turned into an unprecedented worldwide event that garnered major public interest and media recognition, collecting over 55,000 observations from 99 different countries, in more than 15,000 locations, on every continent including Antarctica. The event was called the “Spring Cloud Challenge” and was created to 1) engage the general public in the scientific process and promote the use of the GLOBE Observer app, 2) collect ground-based visual observations of varying cloud types during boreal spring, and 3) increase the number and locations of ground-based visual cloud observations collocated with cloud-observing satellites. The event resulted in roughly 3 times more observations than during the historic and highly publicized 2017 North American total solar eclipse. The dataset also includes observations over the Drake Passage in Antarctica and reports from intense Saharan dust events. This article describes how the challenge was crafted, outreach to volunteer scientists around the world, details of the data collected, and impact of the data.

GLOBE↗
DOE OSTI2016

DISK DETECTIVE: DISCOVERY OF NEW CIRCUMSTELLAR DISK CANDIDATES THROUGH CITIZEN SCIENCE

The Disk Detective citizen science project aims to find new stars with 22 μ m excess emission from circumstellar dust using data from NASA’s Wide-field Infrared Survey Explorer ( WISE ) mission. Initial cuts on the AllWISE catalog provide an input catalog of 277,686 sources. Volunteers then view images of each source online in 10 different bands to identify false positives (galaxies, interstellar matter, image artifacts, etc.). Sources that survive this online vetting are followed up with spectroscopy on the FLWO Tillinghast telescope. This approach should allow us to unleash the full potential of WISE for finding new debris disks and protoplanetary disks. We announce a first list of 37 new disk candidates discovered by the project, and we describe our vetting and follow-up process. One of these systems appears to contain the first debris disk discovered around a star with a white dwarf companion: HD 74389. We also report four newly discovered classical Be stars (HD 6612, HD 7406, HD 164137, and HD 218546) and a new detection of 22 μ m excess around the previously known debris disk host star HD 22128.

79 ASTRONOMY AND ASTROPHYSICS↗
NASA NTRS2016

Disk Detective: Discovery of New Circumstellar Disk Candidates Through Citizen Science

The Disk Detective citizen science project aims to find new stars with 22 micron excess emission from circumstellar dust using data from NASAs Wide-field Infrared Survey Explorer (WISE) mission. Initial cuts on the AllWISE catalog provide an input catalog of 277,686 sources. Volunteers then view images of each source online in 10different bands to identify false positives (galaxies, interstellar matter, image artifacts, etc.). Sources that survive this online vetting are followed up with spectroscopy on the FLWO Tillinghast telescope. This approach should allow us to unleash the full potential of WISE for finding new debris disks and proto planetary disks. We announce a first list of 37 new disk candidates discovered by the project, and we describe our vetting and follow-up process. One of these systems appears to contain the first debris disk discovered around a star with a white dwarf companion: HD 74389. We also report four newly discovered classical Be stars (HD 6612, HD 7406, HD 164137,and HD 218546) and a new detection of 22 micron excess around the previously known debris disk host star HD 22128.

NASAs Wide-field Infrared Survey Explorer (WISE) m↗
NASA NTRS2017

Reinventing Image Detective: An Evidence-Based Approach to Citizen Science Online

Usability studies demonstrate that web users are notoriously impatient, spending as little as 15 seconds on a home page. How do you get users to stay long enough to understand a citizen science project? How do you get users to complete complex citizen science tasks online? Image Detective, a citizen science project originally developed by scientists and science engagement specialists at the NASA Johnson Space center to engage the public in the analysis of images taken from space by astronauts to help enhance NASA's online database of astronaut imagery, partnered with the CosmoQuest citizen science platform to modernize, offering new and improved options for participation in Image Detective. The challenge: to create a web interface that builds users' skills and knowledge, creating engagement while learning complex concepts essential to the accurate completion of tasks. The project team turned to usability testing for an objective understanding of how users perceived Image Detective and the steps required to complete required tasks. A group of six users was recruited online for unmoderated and initial testing. The users followed a think-aloud protocol while attempting tasks, and were recorded on video and audio. The usability test examined users' perception of four broad areas: the purpose of and context for Image Detective; the steps required to successfully complete the analysis (differentiating images of Earth's surface from those showing outer space and identifying common surface features); locating the image center point on a map of Earth; and finally, naming geographic locations or natural events seen in the image. Usability test findings demonstrated that the following best practices can increase participation in Image Detective and can be applied to the successful implementation of any citizen science project: (1) Concise explanation of the project, its context, and its purpose; (2) Including a mention of the funding agency (in this case, NASA); (3) A preview of the specific tasks required of participants; (4) A dedicated user interface for the actual citizen science interaction. In addition, testing revealed that users may require additional context when a task is complex, difficult, or unusual (locating a specific image and its center point on a map of Earth). Video evidence will be made available with this presentation.

Romano, Cia↗
DOE OSTI2021

Perspectives on Citizen Science Data Quality

Information about data quality helps potential data users to determine whether and how data can be used and enables the analysis and interpretation of such data. Providing data quality information improves opportunities for data reuse by increasing the trustworthiness of the data. Recognizing the need for improving the quality of citizen science data, we describe quality assessment and quality control (QA/QC) issues for these data and offer perspectives on aspects of improving or ensuring citizen science data quality and for conducting research on related issues.

54 ENVIRONMENTAL SCIENCES↗
NASA NTRS2023

Do Citizen Science Intense Observation Periods Increase Data Usability? A Deep Dive of the NASA GLOBE Clouds Data Set With Satellite Comparisons

The Global Learning and Observations to Benefit the Environment (GLOBE) citizen science program has recently conducted a series of month-long intensive observation periods (IOPs), asking the public to submit daily reports on cloud and sky conditions from all regions of Earth. This provides a wealth of crowdsourced observations from the ground, which complements other conventional scientific cloud data. In addition, the GLOBE reports are matched in space and time with geostationary and low Earth orbit satellites, which allows for a straightforward comparison of cloud properties, and minimizes the biases associated with mismatched sampling between participants and satellites. The matched GLOBE dataset is used to calculate the mean observed cloud cover by atmospheric level both worldwide and by region. The overall magnitudes of cloud cover between the GLOBE participants and the matched satellites agree within 10%, which is notable given the distinctly different natures of the data sources. The mean vertical cloud profiles show GLOBE reporting more low-level clouds and fewer high-level clouds than satellites. The low cloud disagreement is likely related to satellites missing low clouds when high clouds block their view. Conversely, the high cloud disagreement is related primarily to cloud opacity, as satellites may miss some optically thin clouds. Monte Carlo testing shows the results to be robust, and the tripled amount of IOP data reduces uncertainty by half. These findings also highlight ways in which citizen science IOP data may be used to support scientific research while accounting for their unique properties. Plain Language Summary: Citizen science is becoming an increasingly prominent aspect of scientific research, and so it important to study how citizen science data can be used effectively. For example, The GLOBE Program has recently conducted a series of special data-collecting events, or “challenges”, which gathered large numbers of reports on cloud and sky conditions. Because NASA GLOBE Clouds matches the participant reports with cloud observations from satellites, we can use these data to get a combined view of clouds from above and below. When looking at the average cloud cover for different atmospheric levels across Earth, we find that the GLOBE participants and the satellites agree quite closely. This is a surprising and fascinating find, given how different in nature volunteer ground reports are to satellite measurements. However, there are some small but notable disagreements between GLOBE participants and satellites about the distribution of cloud cover at different levels. In addition, by testing the data for uncertainty, we show that the results from the GLOBE data are reliable, and that more public participation improves the reliability. So, by carefully designing the analysis methodology, and by testing for the uncertainty of the data, citizen science can make a meaningful contribution to scientific research.

J. Brant Dodson↗
DOE OSTI2020

Camera settings and biome influence the accuracy of citizen science approaches to camera trap image classification

Scientists are increasingly using volunteer efforts of citizen scientists to classify images captured by motion-activated trail cameras. The rising popularity of citizen science reflects its potential to engage the public in conservation science and accelerate processing of the large volume of images generated by trail cameras. While image classification accuracy by citizen scientists can vary across species, the influence of other factors on accuracy is poorly understood. Inaccuracy diminishes the value of citizen science derived data and prompts the need for specific best-practice protocols to decrease error. We compare the accuracy between three programs that use crowdsourced citizen scientists to process images online: Snapshot Serengeti, Wildwatch Kenya, and AmazonCam Tambopata. We hypothesized that habitat type and camera settings would influence accuracy. To evaluate these factors, each photograph was circulated to multiple volunteers. All volunteer classifications were aggregated to a single best answer for each photograph using a plurality algorithm. Subsequently, a subset of these images underwent expert review and were compared to the citizen scientist results. Classification errors were categorized by the nature of the error (e.g., false species or false empty), and reason for the false classification (e.g., misidentification). Our results show that Snapshot Serengeti had the highest accuracy (97.9%), followed by AmazonCam Tambopata (93.5%), then Wildwatch Kenya (83.4%). Error type was influenced by habitat, with false empty images more prevalent in open-grassy habitat (27%) compared to woodlands (10%). For medium to large animal surveys across all habitat types, our results suggest that to significantly improve accuracy in crowdsourced projects, researchers should use a trail camera set up protocol with a burst of three consecutive photographs, a short field of view, and determine camera sensitivity settings based on in situ testing. Accuracy level comparisons such as this study can improve reliability of future citizen science projects, and subsequently encourage the increased use of such data.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2017

Considerations for Involving Citizen Science in an Integrated Waste Management System

The U.S. Department of Energy’s (DOE’s) goal is to develop solutions for the long-term, sustainable management of the nation’s spent nuclear fuel (SNF) and high-level radioactive waste (HLW). The DOE has been exploring options for an integrated waste management system to transport, store, and dispose of SNF and HLW from commercial electricity generation, as well national defense activities. To support its efforts, DOE has been exploring ways to seek broad input from the public. The role of citizen science in a wide range of projects is increasing. In the U.S. 2013 and 2015 Open Government National Action Plans, the U.S. government encouraged all Federal agencies to pursue public participation through citizen science, and a large number of agencies and organizations have responded. This paper explores the potential for considering citizen science projects as part of an integrated waste management system, including the siting of facilities. A literature review was performed to gain insights into how citizen science projects can be effectively developed and deployed, including success factors and lessons learned. Results highlight the experiences shared by many people who have developed and implemented citizen science projects, which provide valuable context for potential application to a facility siting process.

Nutt, W. Sam↗
DOE OSTI2017

Considerations for Involving Citizen Science in an Integrated Waste Management System - 17506

The U.S. Department of Energy's (DOE's) goal is to develop solutions for the long-term, sustainable management of the nation's spent nuclear fuel (SNF) and high-level radioactive waste (HLW). The DOE has been exploring options for an integrated waste management system to transport, store, and dispose of SNF and HLW from commercial electricity generation, as well national defense activities. To support its efforts, DOE has been exploring ways to seek broad input from the public. The role of citizen science in a wide range of projects is increasing. In the U.S. 2013 and 2015 Open Government National Action Plans, the U.S. government encouraged all Federal agencies to pursue public participation through citizen science, and a large number of agencies and organizations have responded. This paper explores the potential for considering citizen science projects as part of an integrated waste management system, including the siting of facilities. A literature review was performed to gain insights into how citizen science projects can be effectively developed and deployed, including success factors and lessons learned. Results highlight the experiences shared by many people who have developed and implemented citizen science projects, which provide valuable context for potential application to a facility siting process. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗
DOE OSTI2021

Assimilation of citizen science data in snowpack modeling using a new snow data set: Community Snow Observations

A physically based snowpack evolution and redistribution model was used to test the effectiveness of assimilating crowd-sourced snow depth measurements collected by citizen scientists. The Community Snow Observations project gathers, stores, and distributes measurements of snow depth recorded by recreational users and snow professionals in high mountain environments. These citizen science measurements are valuable since they come from terrain that is relatively undersampled and can offer in situ snow information in locations where snow information is sparse or nonexistent. The present study investigates (1) the improvements to model performance when citizen science measurements are assimilated, and (2) the number of measurements necessary to obtain those improvements. Model performance is assessed by comparing time series of observed (snow pillow) and modeled snow water equivalent values, by comparing spatially distributed maps of observed (remotely sensed) and modeled snow depth, and by comparing fieldwork results from within the study area. The results demonstrate that few citizen science measurements are needed to obtain improvements in model performance, and these improvements are found in 62 % to 78 % of the ensemble simulations, depending on the model year. Model estimations of total water volume from a subregion of the study area also demonstrate improvements in accuracy after CSO measurements have been assimilated. These results suggest that even modest measurement efforts by citizen scientists have the potential to improve efforts to model snowpack processes in high mountain environments, with implications for water resource management and process-based snow modeling.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2018

American Gut: an Open Platform for Citizen Science Microbiome Research

Although much work has linked the human microbiome to specific phenotypes and lifestyle variables, data from different projects have been challenging to integrate and the extent of microbial and molecular diversity in human stool remains unknown. Using standardized protocols from the Earth Microbiome Project and sample contributions from over 10,000 citizen-scientists, together with an open research network, we compare human microbiome specimens primarily from the United States, United Kingdom, and Australia to one another and to environmental samples. Our results show an unexpected range of beta-diversity in human stool microbiomes compared to environmental samples; demonstrate the utility of procedures for removing the effects of overgrowth during room-temperature shipping for revealing phenotype correlations; uncover new molecules and kinds of molecular communities in the human stool metabolome; and examine emergent associations among the microbiome, metabolome, and the diversity of plants that are consumed (rather than relying on reductive categorical variables such as veganism, which have little or no explanatory power). We also demonstrate the utility of the living data resource and cross-cohort comparison to confirm existing associations between the microbiome and psychiatric illness and to reveal the extent of microbiome change within one individual during surgery, providing a paradigm for open microbiome research and education. We show that a citizen science, self-selected cohort shipping samples through the mail at room temperature recaptures many known microbiome results from clinically collected cohorts and reveals new ones. Of particular interest is integrating n = 1 study data with the population data, showing that the extent of microbiome change after events such as surgery can exceed differences between distinct environmental biomes, and the effect of diverse plants in the diet, which we confirm with untargeted metabolomics on hundreds of samples.

59 BASIC BIOLOGICAL SCIENCES↗