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At least 19 records
All sourcesNASA NTRSDOE OSTI
DOE OSTI2023

Diversifying and perennializing plants in agroecosystems alters retention of new C and N from crop residues

Abstract Managing soils to retain new plant inputs is key to moving toward a sustainable and regenerative agriculture. Management practices, like diversifying and perennializing agroecosystems, may affect the decomposer organisms that regulate how new residue is converted to persistent soil organic matter. Here we tested whether 12 years of diversifying/perennializing plants in agroecosystems through extended rotations or grassland restoration would decrease losses of new plant residue inputs and, thus, increase retention of carbon (C) and nitrogen (N) in soil. We tracked dual‐labeled ( 13 C and 15 N), isotopically enriched wheat ( Triticum aestivum ) residue in situ for 2 years as it decomposed in three agroecosystems: maize–soybean (CS) rotation, maize–soybean–wheat plus red clover and cereal rye cover crops (CSW2), and spring fallow management with regeneration of natural grassland species (seven to 10 species; SF). We measured losses of wheat residue (C wheat and N wheat ) in leached soil solution and greenhouse gas fluxes, as well as how much was recovered in microbial biomass and bulk soil at 5‐cm increments down to 20 cm. CSW2 and SF both had unique, significant effects on residue decomposition and retention dynamics that were clear only when using nuanced metrics that able to tease apart subtle differences. For example, SF retained a greater portion of C wheat in 0–5 cm surface soils (155%, p = 0.035) and narrowed the C wheat to N wheat ratio ( p < 0.030) compared to CS. CSW2 increased an index of carbon‐retention efficiency, C wheat retained in the mesocosm divided by total measured, from 0.18 to 0.27 (49%, p = 0.001), compared to CS. Overall, we found that diversifying and extending the duration of living plants in agroecosystems can lead to greater retention of new residue inputs in subtle ways that require further investigation to fully understand.

McDaniel, Marshall D.↗
DOE OSTI2023

Ecological insights into soil health according to the genomic traits and environment-wide associations of bacteria in agricultural soils

Abstract Soil microbiomes are sensitive to current and previous soil conditions, and bacterial ‘bioindicators’ of biological, physical, and chemical soil properties have considerable potential for soil health assessment. However, the lack of ecological or physiological information for most soil microorganisms limits our ability to interpret the associations of bioindicators and, thus, their utility for guiding management. We identified bioindicators of tillage intensity and twelve soil properties used to rate soil health using a 16S rRNA gene-based survey of farmland across North America. We then inferred the genomic traits of bioindicators and evaluated their environment-wide associations (EWAS) with respect to agricultural management practice, disturbance, and plant associations with 89 studies from agroecosystems. Most bioindicators were either positively correlated with biological properties (e.g., organic matter) or negatively correlated with physical and chemical properties. Higher soil health ratings corresponded with smaller genome size and higher coding density, while lower ratings corresponded with larger genomes and higher rrn copy number. Community-weighted genome size explained most variation in health ratings. EWAS linked prominent bioindicators with the impacts of environmental disturbances. Our findings provide ecological insights into bioindicators of soil properties relevant to soil health management, illustrating the tight coupling of microbiome and soil function.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

Viruses of Nitrogen-Fixing Mesorhizobium Bacteria in Globally Distributed Chickpea Root Nodules

Legume nodules are specialized environments on plant roots that are induced and dominated by nitrogen-fixing bacteria. Bacteriophages (phages) in these nodules could potentially provide top-down controls on the population size and, therefore, the function of nitrogen-fixing symbionts. Here we sought to characterize the diversity and biogeographical patterns of phages that infect nitrogen-fixing Mesorhizobium symbionts isolated from root nodules, leveraging 266 genomes of Mesorhizobium isolated from nodules and 648 nodule metagenomes collected from three species of chickpea plants ( Cicer spp.) under different agricultural management practices, spanning eight countries on five continents. We identified 106 phage populations (viral operational taxonomic units [vOTUs]) in Mesorhizobium draft genomes, 37% of which were confirmed as likely prophages. These vOTUs were detected in 64% of the Mesorhizobium-dominated nodule metagenomes and 58% of the Mesorhizobium isolates. Per metagenome, 1 to 16 putative Mesorhizobium vOTUs were detected, with more than half of the nodules containing only one such vOTU. The majority of vOTUs were detected exclusively in Ethiopia, followed by India and Morocco, with the lowest richness of putative Mesorhizobium phages in countries that applied industrial Mesorhizobium inoculants to crops. Two vOTUs were identified in five or more countries and in nodules dominated by different strains of Mesorhizobium, suggesting infection of diverse Mesorhizobium hosts and long-term interactions. Beta-diversity of these Mesorhizobium phage assemblages was significantly correlated with the dominant Mesorhizobium strain, but not with measured environmental parameters. Our findings indicate that nitrogen-fixing nodules in chickpea plants can contain distinct viral assemblages, with potential impacts on the nodule microbiome that bear further exploration.

Microbiology↗
NASA NTRS2009

Simulating the Effects of Irrigation over the U.S. in a Land Surface Model Based on Satellite Derived Agricultural Data

A novel method is introduced for integrating satellite derived irrigation data and high-resolution crop type information into a land surface model (LSM). The objective is to improve the simulation of land surface states and fluxes through better representation of agricultural land use. Ultimately, this scheme could enable numerical weather prediction (NWP) models to capture land-atmosphere feedbacks in managed lands more accurately and thus improve forecast skill. Here we show that application of the new irrigation scheme over the continental US significantly influences the surface water and energy balances by modulating the partitioning of water between the surface and the atmosphere. In our experiment, irrigation caused a 12% increase in evapotranspiration (QLE) and an equivalent reduction in the sensible heat flux (QH) averaged over all irrigated areas in the continental US during the 2003 growing season. Local effects were more extreme: irrigation shifted more than 100 W/m from QH to QLE in many locations in California, eastern Idaho, southern Washington, and southern Colorado during peak crop growth. In these cases, the changes in ground heat flux (QG), net radiation (RNET), evapotranspiration (ET), runoff (R), and soil moisture (SM) were more than 3 W/m(sup 2), 20 W/m(sup 2), 5 mm/day, 0.3 mm/day, and 100 mm, respectively. These results are highly relevant to continental- to global-scale water and energy cycle studies that, to date, have struggled to quantify the effects of agricultural management practices such as irrigation. Based on the results presented here, we expect that better representation of managed lands will lead to improved weather and climate forecasting skill when the new irrigation scheme is incorporated into NWP models such as NOAA's Global Forecast System (GFS).

Ozdogan, Mutlu↗
DOE OSTI2022

Coffee supply chain planning under climate change

The growing demand but uncertain supply makes the sustainability of the coffee industry a shared concern for all participants along the coffee supply chain. This study proposed a decision-making model that comprises the cultivation management, including shade management and annual agriculture management, and the supply chain logistics. A two-stage stochastic program is presented and used within a rolling horizon scheme that periodically updates input data information to deal with uncertainty associated with future climate scenarios. The program minimizes the total expected cost of the entire supply chain of arabica coffee. The study applied the model to the real case study of arabica coffee bean supply to the U.S. market, trying to answer whether arabica coffee supply can meet the U.S. demand from 2022 to 2050 and how to best mitigate any shortage through corporate-farmer partnerships. The results show that the coffee supply will have a 3% shortage in the future; medium-level shade management and more irrigation and fertilization are possible mitigation strategies. These results demonstrate the need for all participants to adopt suitable technologies for the sustainability of global coffee supply chains together.

54 ENVIRONMENTAL SCIENCES↗
NASA NTRS2024

Idaho & Oregon Agriculture: Monitoring Vegetation Impacts of Livestock Management Practices Used to Reduce Predator Conflicts on Idaho and Oregon Grazing Allotments

The practice of night penning, which involves corralling livestock into a fenced, secure area overnight, aims to safeguard animals from predators. Although this method has proven successful in minimizing interactions between livestock and wildlife, the extent of its impact on vegetation communities is still being explored. This project examines the feasibility of using Net Primary Productivity (NPP) values from the Rangeland Analysis Platform (RAP) to quantify the impacts of night penning on rangeland vegetation communities. RAP provides spatially distributed values of vegetation composition, cover, and productivity, and is derived from imagery from Landsat 5, Landsat 7 & Landsat 8 at a 30m resolution for rangelands across the United States. Our DEVELOP team partnered with Alderspring Ranch, Krebs Livestock, and the U.S Department of Agriculture Animal & Plant Health Inspection Service (APHIS) to analyze the impacts of night penning on vegetation communities. We identified control sites that captured the topographic characteristics of night pen sites used by our partners. We then quantified and compared changes in annual NPP between night pen and control sites. Our analysis of RAP NPP data, using a control-treatment design did not find impacts of night penning on vegetation. However, this was a preliminary analysis, and does not conclusively quantify the impacts of night penning on rangeland vegetation. Our analysis indicated that RAP may be a feasible tool to study livestock management impacts on rangeland vegetation; however, future studies could further validate these findings through ground observations.

Rangeland Analysis Platform (RAP)↗
NASA NTRS2021

Emerging satellite observations for diurnal cycling of ecosystem processes

Diurnal cycling of plant carbon uptake and water use, and their responses to water and heat stresses, provide direct insight into assessing ecosystem productivity, agricultural production and management practices, carbon and water cycles, and feedbacks to the climate. Temperature, light, atmospheric water demand, soil moisture and leaf water potential vary over the course of the day, leading to diurnal variations in stomatal conductance, photosynthesis and transpiration. Earth observations from polar-orbiting satellites are incapable of studying these diurnal variations. Here, we review the emerging satellite observations that have the potential for studying how plant functioning and ecosystem processes vary over the course of the diurnal cycle. The recently launched ECOsystem Spaceborne Thermal Radiometer Experiment on Space Station (ECOSTRESS) and Orbiting Carbon Observatory-3 (OCO-3) provide land surface temperature, evapotranspiration (ET), gross primary production (GPP) and solar-induced chlorophyll fluorescence data at different times of day. New generation operational geostationary satellites such as Himawari-8 and the GOES-R series can provide continuous, high-frequency data of land surface temperature, solar radiation, GPP and ET. Future satellite missions such as GeoCarb, TEMPO and Sentinel-4 are also planned to have diurnal sampling capability of solar-induced chlorophyll fluorescence. We explore the unprecedented opportunities for characterizing and understanding how GPP, ET and water use efficiency vary over the course of the day in response to temperature and water stresses, and management practices. We also envision that these emerging observations will revolutionize studies of plant functioning and ecosystem processes in the context of climate change and that these observations and findings can inform agricultural and forest management and lead to improvements in Earth system models and climate projections.

Plant functioning↗
DOE OSTI2023

Forming the Future of Agrohydrology

Agricultural water management is increasingly prioritized throughout the world as producers are tasked with meeting growing crop demand while also managing environmental resources more sustainably. Likewise, agriculture is increasingly modifying the terrestrial water cycle. In response to these dynamics, the informal research discipline of agrohydrology continues to grow, fueled by a new era of rapidly evolving research tools and big data availability. While many researchers are actively invested in agrohydrology as a research topic, there remains a gap in formalizing this valuable discipline. This article aims to: (a) identify key research themes in agrohydrology, (b) conceptualize future research topics within each theme, and (c) estimate a timeframe before topics become pressing (i.e., before a topic becomes a limiting factor in advancing water management in an agricultural context). This commentary is meant to guide the trajectory of an evolving discipline of agrohydrology, the practice of agricultural water management at multiple nested scales, and the conversation of the invested public.

54 ENVIRONMENTAL SCIENCES↗
NASA NTRS1994

Short term responses of nitrogen trace gas emissions to nitrogen fertilization in tropical sugar cane: Variations due to soils and management practices

Nitrogen (N) fertilization of agricultural systems is thought to be a major source of the increase in atmospheric N2O; NO emissions from soils have also been shown to increase due to N fertilization. While N fertilizer use is increasing rapidly in the developing world and in the tropics, nearly all of our information on gas emissions is derived from studies of temperate zone agriculture. Using chambers, we measured fluxes of N2O and NO following urea fertilization in tropical sugar cane systems growing on a variety of soil types in the Hawaiian Islands, USA. On the island of Maui, where urea is applied in irrigation lines and soils are mollisols and inceptisols, N2O fluxes were elevated for a week or less following fertilization; maximum average fluxes were typically less than 30 ng cm(exp -2)/ h. NO fluxes were often an order of magnitude less than N2O. Together, N2O and NO represented from 0.01 - 0.5% of the applied N. In fields on the island of Hawaii, where urea is broadcast on the surface and soils are andisols, N2O fluxes were similar in magnitude to Maui but remained elevated for much longer periods after fertilization. NO emissions were 2-5 times higher than N2O through most of the sampling periods. Together the gases loss represented approximately 1. 1 - 3% of the applied N. Laboratory studies indicate that denitrification is a critical source of N2O in Maui, but that nitrification is more important in Hawaii. Experimental studies suggest that differences in the pattern of N2O/NO and the processes producing them are a result of both carbon availability and placement of fertilizer, and that the more information-intensive fertilizer management practice results in lower emissions.

Matson, P. A.↗
DOE OSTI2025

Machine Learning Models for Mapping Groundwater Pollution Risk: Advancing Water Security and Sustainable Development Goals in Georgia, USA

The widespread use of pesticides, such as atrazine and malathion, in agricultural systems raises significant concerns regarding the contamination of groundwater, which serves as a critical resource for drinking water. This study applies machine learning techniques to predict the concentrations of atrazine and malathion in groundwater across Georgia, USA, using 2019 data. A Random Forest classifier was employed to integrate various environmental and demographic factors, including pesticide application rates, precipitation, lithology, and population density, to predict pesticide contamination in groundwater. The models demonstrated high training accuracies of 100% and moderate average testing accuracy of 55% for atrazine and 60% for malathion across five iterations. The low test accuracy of the model, ranging from 50% to 75%, is likely due to overfitting, which can be attributed to the small dataset size and the complex nature of pesticide-contamination patterns, making it challenging for the model to generalize to unseen data. Feature importance analysis revealed that average pesticide usage emerged as the most influential factor for atrazine, while aquifer lithology and precipitation played crucial roles in both models. These results provide valuable insights into the dynamics of pesticide contamination, highlighting areas at greater risk of contamination. The findings underscore the importance of integrating environmental, geological, and agricultural variables for more effective groundwater management and sustainable agricultural practices, contributing to the protection of water resources and public health.

54 ENVIRONMENTAL SCIENCES↗
NASA NTRS1988

Radar scattering and soil moisture

Research is being conducted on microwave scattering from vegetation. The objective is to develop techniques for measuring parameters of the vegetation canopy (such as biomass) needed for understanding global biogeochemical cycles and to develop techniques for correcting microwave measurements of soil moisture for the effects of the vegetation canopy. Measurements of vegetation and soil moisture are important for understanding the environment on a global scale. For example, moisture in the soil is an important, highly variable, element in the global hydrologic cycle. The hydrologic cycle, in turn, is strongly coupled to weather and climate through moisture (and energy) fluxes at the surface. The amount and distribution of vegetation is an important element in biogeochemical cycles; and knowledge of both the vegetation canopy and soil moisture is of practical importance in agricultural management. These theories are examined.

Levine, D. M.↗
NASA NTRS1995

Investigation of biomass burning and aerosol loading and transport in South America utilizing geostationary satellites

This study attempts to assess the extent of burning and associated aerosol transport regimes in South America and the South Atlantic using geostationary satellite observations, in order to explore the possible roles of biomass burning in climate change and more directly in atmospheric chemistry and radiative transfer processes. Modeling and analysis efforts have suggested that the direct and indirect radiative effects of aerosols from biomass burning may play a major role in the radiative balance of the earth and are an important factor in climate change calculations. One of the most active regions of biomass burning is located in South America, associated with deforestation in the selva (forest), grassland management, and other agricultural practices. As part of the NASA Aerosol Interdisciplinary Program, we are utilizing GOES-7 (1988) and GOES-8 (1995) visible and multispectral infrared data (4, 11, and 12 microns) to document daily biomass burning activity in South America and to distinguish smoke/aerosols from other multi-level clouds and low-level moisture. This study catalogues the areal extent and transport of smoke/aerosols throughout the region and over the Atlantic Ocean for the 1988 (July-September) and 1995 (June-October) biomass burning seasons. The smoke/haze cover estimates are compared to the locations of fires to determine the source and verify the haze is actually associated with biomass burning activities. The temporal resolution of the GOES data (half-hourly in South America) makes it possible to determine the prevailing circulation and transport of aerosols by considering a series of visible and infrared images and tracking the motion of smoke, haze and adjacent clouds. The study area extends from 40 to 70 deg W and 0 to 40 deg S with aerosol coverage extending over the Atlantic Ocean when necessary. Fire activity is estimated with the GOES Automated Biomass Burning Algorithm (ABBA). To date, our efforts have focused on GOES-7 and GOES-8 ABBA development, algorithm development for aerosol monitoring, data acquisition and archiving, and participation in the SCAR-C and SCAR-B field programs which have provided valuable information for algorithm testing and validation. Implementation of the initial version of the GEOS-8 ABBA on case studies in North, Central, and South America has demonstrated the improved capability for monitoring diurnal fire activity and smoke/aerosol transport with the GOES-8 throughout the Western Hemisphere.

Menzel, Paul↗
DOE OSTI2026

Crop models: integrating systems from the molecular to global for agricultural productivity and sustainability

Mathematical models that simulate crop growth in response to environmental conditions and management practices are essential tools for exploring agriculture-based strategies to address food security and environmental sustainability challenges. Early applications of crop models focused on supporting farmers in making management decisions. Applications have since expanded to estimating future impacts on local and global food production from changing climates. Emerging applications of crop models aim to leverage how these models integrate plant processes across biological scales to identify engineering or breeding strategies that account for environmentally-responsive dynamics at field scales and for exploring solutions to improve sustainability. In this review, we highlight recent studies across these four broad application areas and highlight potential future directions for the crop modeling field.

Piao, Ximin [Univ. of Illinois at Urbana-Champaign↗
DOE OSTI2024

Printed Potentiometric Ammonium Sensors for Agriculture Applications

Ammonium (NH 4 + ) concentration is critical to both nutrient availability and nitrogen (N) loss in soil ecosystems but can be highly variable across spatial and temporal scales. For this reason, effectively informing agricultural practices such as fertilizer management and understanding of mechanisms of soil N loss require sensor technologies to monitor ammonium concentrations in real time. Our work investigates the performance of fully printed ammonium ion-selective sensors used in diverse soil environments. Ammonium sensors consisting of a printed ammonium ion-selective electrode and a printed Ag/AgCl reference were fabricated and characterized in aqueous solutions and three different soil types (sand, peat, and clay) under the range of ion concentrations likely to be present in soil (0.01–100 mM). The response of ammonium sensors was further evaluated under variable gravimetric moisture content in the soil to reflect their reliability under field conditions. Ammonium sensors demonstrated a sensitivity of 53.6 ± 5.1 mV/decade when tested in aqueous solution, and a sensitivity of 55.7 ± 11 mV/dec, 57.5 ± 4.1 mV/dec, and 43.7 ± 4 mV/dec was measured in sand, clay, and peat soils, respectively.

60 APPLIED LIFE SCIENCES↗