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Results for “Tara Oceans”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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7 records

All sources NASA NTRS DOE OSTI

NASA NTRS2013

Underway Sampling of Marine Inherent Optical Properties on the Tara Oceans Expedition as a Novel Resource for Ocean Color Satellite Data Product Validation

Developing and validating data records from operational ocean color satellite instruments requires substantial volumes of high quality in situ data. In the absence of broad, institutionally supported field programs, organizations such as the NASA Ocean Biology Processing Group seek opportunistic datasets for use in their operational satellite calibration and validation activities. The publicly available, global biogeochemical dataset collected as part of the two and a half year Tara Oceans expedition provides one such opportunity. We showed how the inline measurements of hyperspectral absorption and attenuation coefficients collected onboard the R/V Tara can be used to evaluate near-surface estimates of chlorophyll-a, spectral particulate backscattering coefficients, particulate organic carbon, and particle size classes derived from the NASA Moderate Resolution Imaging Spectroradiometer onboard Aqua (MODISA). The predominant strength of such flow-through measurements is their sampling rate-the 375 days of measurements resulted in 165 viable MODISA-to-in situ match-ups, compared to 13 from discrete water sampling. While the need to apply bio-optical models to estimate biogeochemical quantities of interest from spectroscopy remains a weakness, we demonstrated how discrete samples can be used in combination with flow-through measurements to create data records of sufficient quality to conduct first order evaluations of satellite-derived data products. Given an emerging agency desire to rapidly evaluate new satellite missions, our results have significant implications on how calibration and validation teams for these missions will be constructed.

remote sensing↗

DOE OSTI2025

Viroid-like “obelisk” agents are widespread in the ocean and exceed the abundance of RNA viruses in the prokaryotic fraction

Abstract “Obelisks” are recently discovered ribonucleic acid (RNA) viroid-like elements present in diverse environments with no phylogenetic similarity to any known biological agent. obelisks were first identified in the human gut and in a commensal bacterium acting as a replicative host. They have a circular ∼1 kb RNA genome, rod-like secondary structures, and the encoding of a protein superfamily called “Oblins”. We performed a large-scale search of obelisks in the ocean using the Pebblescout program and the transcriptomic Sequence Archive Read databases, revealing the biogeography and abundance of these viroid-like RNA elements. We detected 55 obelisk genomes resulting in 35 marine clusters at the species level. These obelisks were detected in the prokaryotic fraction and to a lesser extent in the eukaryotic fraction, and distributed across all the oceans from surface to mesopelagic including the Arctic, and even in the coldest seawater of Earth beneath the Antarctic Ross Ice Shelf. The obelisk hallmark protein Oblin-1 confirmed by 3D models was found in various marine samples. Some of the detected marine obelisks harbor hammerhead self-cleaving ribozymes in both polarities. In the prokaryotic, but not the eukaryotic, fraction of the Tara Ocean dataset, relative abundance of obelisks calculated by transcriptomic fragment recruitment indicated that they are abundant in marine samples, reaching or even exceeding the relative abundance of the previously discovered uncultured RNA viruses. In conclusion, obelisks are abundant and widespread viroid-like elements that should be included in ocean biogeochemical models.

Environmental Sciences & Ecology↗

DOE OSTI2024

Exabiome: Advancing Microbial Science through Exascale Computing

The Exabiome project seeks to improve the understanding of microbiomes through the development of methods for accelerating metagenomic science using exascale computing. This article gives an overview of scientific impact of the three components of the project: metagenome assembly, protein family detection, and comparative analysis of metagenomes. Exabiome developed MetaHipMer, the only metagenome assembler capable of scaling to full exascale systems. MetaHipMer has enabled ground-breaking assemblies on the Frontier supercomputer, with many scientific benefits, such as the discovery of rare species and viral genomes. To investigate protein families, Exabiome developed two exascale tools, PASTIS and HipMCL. Together, these can utilize exascale resources to understand the functional diversity of billions of dark matter proteins and novel protein families. For comparative analysis, Exabiome developed kmerprof, a tool that can be used to compare huge metagenomes for many different scientific purposes, for example, grouping human microbiomes according to body location.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2026

As above, not so below: Ion fractionation in planetary analog ices

The geophysical evolution and astrobiological potential of ocean worlds are indelibly linked to the chemical compositions of their oceans and ice shells. In the absence of direct measurements, empirical estimates of subsurface ocean compositions have relied on the assumption that the ionic compositions of ice shell surfaces are representative of their underlying ocean compositions. Here, we present experimental results demonstrating that ion fractionation—the differential entrainment of ion species in forming ices—is likely a prevalent process on ocean worlds, suggesting that planetary ice shell compositions do not directly reflect their underlying ocean compositions. We measure in-ice depletions and amplifications of relative ion concentrations ranging between −40 and +77%, compared to the parent fluid composition. Although this may complicate the interpretation of spacecraft data, ion fractionation provides a mechanism for generating compositionally diverse ices that could help explain the geological complexity of planetary ice shells.

58 GEOSCIENCES↗

NASA NTRS2021

Assessing Disaggregated SMAP Soil Moisture Products in the United States

A soil moisture (SM) disaggregation algorithm based on thermal inertia (TI) theory was implemented to downscale the Soil Moisture Active Passive (SMAP) Enhanced product(SPL2SMPE) from 9 km to 1 km over the continental United States. The algorithm applies land surface temperature and normalized difference vegetation index from Moderate Resolution Imaging Spectroradiometer (MODIS) at higher spatial resolution to estimate relative soil wetness within a coarse SMAP grid -this MODIS-derived relative wetness is then used to produce the downscaled SMAP SM. Results from the algorithm were evaluated in terms of their spatiotemporal coverage and accuracy using in situ measurements from SMAP Core Validation Sites (CVS), the US Department of Agriculture Soil Climate Analysis Network (USDA-SCAN), and the National Oceanic and Atmospheric Administration Climate Reference Network(NOAA-CRN). Results were also compared with the baselineSPL2SMPE and the SMAP/Sentinel-1 (SPL2SMAPS) 1kmproduct. Overall, the unbiased root mean square error (ubRMSE)of the disaggregated SM at the CVS using the TI approach is approximately 0.04 m3=m3, which is the SMAP mission requirement for the baseline products. The TI approach out performs the SMAP/Sentinel SL2SMAPS 1km product by approximately0.02 m3=m3. Over the agriculture/crop areas from SCAN and CRN sparse network stations, the TI approach exhibits better ubRMSE compared to SPL2SMPE andSPL2SMAPS byabout0.01 and 0.02 m3=m3, indicating its advantage in these areas. However, a drawback of this approach is that there are data gaps due to cloud cover as optical sensors cannot have a clear view of the land surface.

Soil moisture↗

NASA NTRS2019

Dynamic Characterization of the Crew Module Uprighting System for NASA’s Orion Crew Module

The Orion Crew Module Uprighting System is a set of five airbag that are responsible for the uprighting of the crew module in the case of an inverted splashdown. A series of tests during the Underway Recovery Test 7 (URT-7) were run in preparation for the Artemis I mission, where the dynamic characterization of the CMUS in an ocean wave environment was performed. A Datawell Waverider DWR-G4 wave buoy was deployed to the characterize the wave environment during these tests. The heave measurements from this buoy were projected to the Orion Crew Module Buoyancy Test Article location by two different methods: (1) directly time-shifting the data, and (2) performing a frequency-domain, phase-shifting operation. Results demonstrate that the phase-shifting operation led to better correlation with the true crew module response to wave excitation as compared with the purely time-shifted method. Additionally, a novel approach to localize an object in a bidirectional wave field based on its heave response is presented and validated with URT- 7 data. Given a wave measurement device at a known location, one can estimate the relative distance to another object based solely off its heave response. Results show that if signals have sufficiently good correlation, this method can be used to estimate the relative separation between two objects in the same wave field.

Vertaska, Ivan Bertaska↗

DOE OSTI2025

Learned magnetic map cues and two mechanisms of magnetoreception in turtles

Growing evidence indicates that migratory animals exploit the magnetic field of the Earth for navigation, both as a compass to determine direction and as a map to determine geographical position. It has long been proposed that, to navigate using a magnetic map, animals must learn the magnetic coordinates of the destination, yet the pivotal hypothesis that animals can learn magnetic signatures of geographical areas has, to our knowledge, yet to be tested. Here, in this work, we report that an iconic navigating species, the loggerhead turtle ( Caretta caretta ), can learn such information. When fed repeatedly in magnetic fields replicating those that exist in particular oceanic locations, juvenile turtles learned to distinguish magnetic fields in which they encountered food from magnetic fields that exist elsewhere, an ability that might underlie foraging site fidelity. Conditioned responses in this new magnetic map assay were unaffected by radiofrequency oscillating magnetic fields, a treatment expected to disrupt radical-pair-based chemical magnetoreception, suggesting that the magnetic map sense of the turtle does not rely on this mechanism. By contrast, orientation behaviour that required use of the magnetic compass was disrupted by radiofrequency oscillating magnetic fields. The findings provide evidence that two different mechanisms of magnetoreception underlie the magnetic map and magnetic compass in sea turtles.

animal behaviour↗