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Results for “Rosette Pattern”

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DOE OSTI2020

Iterative Learning Control for Video-rate Atomic Force Microscopy

We present a control scheme for video-rate atomic force microscopy with rosette pattern. The controller structure involves a feedback internal-model-based controller and a feedforward iterative learning controller. The iterative learning controller is designed to improve tracking performance of the feedback-controlled scanner by rejecting the repetitive disturbances arising from the system nonlinearities. We investigate the performance of two inversion techniques for constructing the learning filter. We conduct tracking experiments using a two-degree-of-freedom microelectromechanical system (MEMS) nanopositioner at frame rates ranging from 5 to 20 frames per second. Furthermore, the results reveal that the algorithm converges rapidly and the iterative learning controller significantly reduces both the transient and steady-state tracking errors. We acquire and report a series of high-resolution time-lapsed video-rate AFM images with the rosette pattern.

42 ENGINEERING↗

DOE OSTI2021

A Kinematic Perspective on the Formation Process of the Stellar Groups in the Rosette Nebula

Stellar kinematics is a powerful tool for understanding the formation process of stellar associations. Here, we present a kinematic study of the young stellar population in the Rosette nebula using recent Gaia data and high-resolution spectra. We first isolate member candidates using the published mid-infrared photometric data and the list of X-ray sources. A total of 403 stars with similar parallaxes and proper motions are finally selected as members. The spatial distribution of the members shows that this star-forming region is highly substructured. The young open cluster NGC 2244 in the center of the nebula has a pattern of radial expansion and rotation. We discuss its implication on the cluster formation, e.g., monolithic cold collapse or hierarchical assembly. On the other hand, we also investigate three groups located around the border of the H ii bubble. The western group seems to be spatially correlated with the adjacent gas structure, but their kinematics is not associated with that of the gas. The southern group does not show any systematic motion relative to NGC 2244. These two groups might be spontaneously formed in filaments of a turbulent cloud. The eastern group is spatially and kinematically associated with the gas pillar receding away from NGC 2244. This group might be formed by feedback from massive stars in NGC 2244. Our results suggest that the stellar population in the Rosette Nebula may form through three different processes: the expansion of stellar clusters, hierarchical star formation in turbulent clouds, and feedback-driven star formation.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

DOE OSTI2022

Bassanite Grows Along Distinct Coexisting Pathways and Provides a Low Energy Interface for Gypsum Nucleation

Calcium sulfate is a naturally abundant and industrially important mineral; understanding its formation mechanism contributes to reconstructing geochemical record and controlling its scaling in industry. Formation of gypsum is shown to follow a multistage-processes via bassanite, but the evolution of bassanite and the mechanism by which it is replaced by gypsum are poorly understood. Here we outline a three-stage process: (i) growth of bassanite nanoparticles into nanorods or rosettes, (ii) extension of bassanite rosettes by addition of fundamental growth units and aggregation of bassanite nanorods into aggregates, and (iii) heterogeneous nucleation of gypsum on the tips of bassanite rosettes and aggregates. The findings demonstrate that bassanite grows via distinct coexisting pathways and provides a low energy interface for heterogeneous nucleation of gypsum, thus providing proofs that more than one growth pathway can operate simultaneously in a crystallization system and that the precursors in multistage crystallization processes can imprint their pattern of precipitation onto the final phase.

36 MATERIALS SCIENCE↗

DOE OSTI2022

Hierarchical deep reinforcement learning reveals a modular mechanism of cell movement

Time-lapse images of cells and tissues contain rich information about dynamic cell behaviours, which reflect the underlying processes of proliferation, differentiation and morphogenesis. However, we lack computational tools for effective inference. Here we exploit deep reinforcement learning (DRL) to infer cell–cell interactions and collective cell behaviours in tissue morphogenesis from three-dimensional (3D) time-lapse images. We use hierarchical DRL (HDRL), known for multiscale learning and data efficiency, to examine cell migrations based on images with a ubiquitous nuclear label and simple rules formulated from empirical statistics of the images. When applied to Caenorhabditis elegans embryogenesis, HDRL reveals a multiphase, modular organization of cell movement. Imaging with additional cellular markers confirms the modular organization as a novel migration mechanism, which we term sequential rosettes. Furthermore, HDRL forms a transferable model that successfully differentiates sequential rosettes-based migration from others. Our study demonstrates a powerful approach to infer the underlying biology from time-lapse imaging without prior knowledge.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2024

Cryogenic electron tomography reveals novel structures in the apical complex of Plasmodium falciparum

Intracellular infectious agents, like the malaria parasite, Plasmodium falciparum, face the daunting challenge of how to invade a host cell. This problem may be even harder when the host cell in question is the enucleated red blood cell, which lacks the host machinery co-opted by many pathogens for internalization. Evolution has provided P. falciparum and related single-celled parasites within the phylum Apicomplexa with a collection of organelles at their apical end that mediate invasion. This apical complex includes at least two sets of secretory organelles, micronemes and rhoptries, and several structural features like apical rings and a putative pore through which proteins may be introduced into the host cell during invasion. We perform cryogenic electron tomography (cryo-ET) equipped with Volta Phase Plate on isolated and vitrified merozoites to visualize the apical machinery. Through tomographic reconstruction of cellular compartments, we see new details of known structures like the rhoptry tip interacting directly with a rosette resembling the recently described rhoptry secretory apparatus (RSA), or with an apical vesicle docked beneath the RSA. Subtomogram averaging reveals that the apical rings have a fixed number of repeating units, each of which is similar in overall size and shape to the units in the apical rings of tachyzoites of Toxoplasma gondii. Comparison of these polar rings in Plasmodium and Toxoplasma parasites also reveals them to have a structurally conserved assembly pattern. These results provide new insight into the essential and structurally conserved features of this remarkable machinery used by apicomplexan parasites to invade their respective host cells.

59 BASIC BIOLOGICAL SCIENCES↗

NASA NTRS1984

Verification and application of the Iosipescu shear test method

Finite element models were used to study the effects of notch angle variations on the stress state within an Iosipescu shear test speciment. These analytical results were also studied to determine the feasibility of using strain gage rosettes and a modified extensometer to measure shear strains in this test specimen. Analytical results indicate that notch angle variations produced only small differences in simulated shear properties. Both strain gage rosettes and the modified extensometer were shown to be feasible shear strain transducers for the test method. The Iosipoescu shear test fixture was redesigned to incorporate several improvements. These improvements include accommodation of a 50 percent larger specimen for easier measurement of shear train, a clamping mechanism to relax strict tolerances on specimen width, and a self contained alignment tool for use during specimen installation. A set of in-plane and interlaminar shear properties were measured for three graphite fabric/epoxy composites of T300/934 composite material. The three weave patterns were Oxford, 5-harness satin, and 8-harness satin.

Walrath, D. E.↗

NASA NTRS2003

WVD2 and WDL1 modulate helical organ growth and anisotropic cell expansion in Arabidopsis

Wild-type Arabidopsis roots develop a wavy pattern of growth on tilted agar surfaces. For many Arabidopsis ecotypes, roots also grow askew on such surfaces, typically slanting to the right of the gravity vector. We identified a mutant, wvd2-1, that displays suppressed root waving and leftward root slanting under these conditions. These phenotypes arise from transcriptional activation of the novel WAVE-DAMPENED2 (WVD2) gene by the cauliflower mosaic virus 35S promoter in mutant plants. Seedlings overexpressing WVD2 exhibit constitutive right-handed helical growth in both roots and etiolated hypocotyls, whereas the petioles of WVD2-overexpressing rosette leaves exhibit left-handed twisting. Moreover, the anisotropic expansion of cells is impaired, resulting in the formation of shorter and stockier organs. In roots, the phenotype is accompanied by a change in the arrangement of cortical microtubules within peripheral cap cells and cells at the basal end of the elongation zone. WVD2 transcripts are detectable by reverse transcriptase-polymerase chain reaction in multiple organs of wild-type plants. Its predicted gene product contains a conserved region named "KLEEK," which is found only in plant proteins. The Arabidopsis genome possesses seven other genes predicted to encode KLEEK-containing products. Overexpression of one of these genes, WVD2-LIKE 1, which encodes a protein with regions of similarity to WVD2 extending beyond the KLEEK domain, results in phenotypes that are highly similar to wvd2-1. Silencing of WVD2 and its paralogs results in enhanced root skewing in the wild-type direction. Our observations suggest that at least two members of this gene family may modulate both rotational polarity and anisotropic cell expansion during organ growth.

NASA Discipline Plant Biology↗