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At least 19 records

Arabidopsis plants expressing only the redox–regulated Rca–α isoform have constrained photosynthesis and plant growth

Rubisco activase (Rca) facilitates the release of sugar–phosphate inhibitors from the active sites of Rubisco and thereby plays a central role in initiating and sustaining Rubisco activation. In Arabidopsis, alternative splicing of a single Rca gene results in two Rca isoforms, Rca–α and Rca–β. Redox modulation of Rca–α regulates the function of Rca–α and Rca–β acting together to control Rubisco activation. Although Arabidopsis Rca–α alone less effectively activates Rubisco in vitro, it is not known how CO 2 assimilation and plant growth are impacted. Here, we show that two independent transgenic Arabidopsis lines expressing Rca–α in the absence of Rca–β (‘Rca–α only’ lines) grew more slowly in various light conditions, especially under low light or fluctuating light intensity, and in a short day photoperiod compared to wildtype. Photosynthetic induction was slower in the Rca–α only lines, and they maintained a lower rate of CO 2 assimilation during both photoperiod types. Here, our findings suggest Rca oligomers composed of Rca–α only are less effective in initiating and sustaining the activation of Rubisco than when Rca–β is also present. Currently there are no examples of any plant species that naturally express Rca–α only but numerous examples of species expressing Rca–β only. That Rca–α exists in most plant species, including many C3 and C4 food and bioenergy crops, implies its presence is adaptive under some circumstances.

59 BASIC BIOLOGICAL SCIENCES↗

Data from Arabidopsis Plants Expressing Only the Redox-Regulated Rca-α Isoform Have Constrained Photosynthesis and Plant Growth

Rubisco activase (Rca) facilitates the release of sugar‐phosphate inhibitors from the active sites of Rubisco and thereby plays a central role in initiating and sustaining Rubisco activation. In Arabidopsis, alternative splicing of a single Rca gene results in two Rca isoforms, Rca‐α and Rca‐β. Redox modulation of Rca‐α regulates the function of Rca‐α and Rca‐β acting together to control Rubisco activation. Although Arabidopsis Rca‐α alone less effectively activates Rubisco in vitro , it is not known how CO2 assimilation and plant growth are impacted. Here, we show that two independent transgenic Arabidopsis lines expressing Rca‐α in the absence of Rca‐β (“Rca‐α only” lines) grew more slowly in various light conditions, especially under low light or fluctuating light intensity, and in a short day photoperiod compared to wildtype. Photosynthetic induction was slower in the Rca‐α only lines, and they maintained a lower rate of CO2 assimilation during both photoperiod types. Our findings suggest Rca oligomers composed of Rca‐α only are less effective in initiating and sustaining the activation of Rubisco than when Rca‐β is also present. Currently there are no examples of any plant species that naturally express Rca‐α only but numerous examples of species expressing Rca‐β only. That Rca‐α exists in most plant species, including many C3 and C4 food and bioenergy crops, implies its presence is adaptive under some circumstances.

Biomass Analytics↗

Carbonation reaction of recycled concrete aggregates (RCA): CO 2 mass consumption under various treatment conditions

Concrete is a key building material around the world due to its excellent strength and durability. Recycling demolished concrete for new construction materials may play a significant role in sustainable development. Producing recycled concrete aggregates (RCA) from waste concrete is one approach for such an initiative. However, using RCA may pose challenges, such as reduced density, lower elastic modulus and strength, and increased water absorption. Recently, the carbonation of RCA has emerged as a method to address those concerns. This study explores the carbon sequestration capacity of RCA through carbonation, examining various parametric conditions, including initial CO 2 pressure, relative humidity, temperature, and pre-treatment approach. Both lab-scale and large-scale carbonation tests were conducted. Additionally, a cost analysis and CO 2 footprint assessment were performed. The findings showed that applying higher initial CO 2 pressures (e.g., 40–60 psi) and optimal relative humidity (~55 %) could significantly enhance the carbonation efficiency of RCA. Elevating temperature also led to accelerated CO 2 consumption, being more effective on the lab scale. The economic analysis presented potential cost benefits when substituting natural aggregates with CO 2 -treated RCA. All in all, these results suggest that the carbonation of RCA may provide significant environmental benefits through carbon sequestration, promoting sustainable construction practices.

36 MATERIALS SCIENCE↗

Data for A Role for Differential Rubisco Activase Isoform Expression in C4 Bioenergy Grasses at High Temperature

Rubisco activase (Rca) facilitates the release of sugar-phosphate inhibitors at Rubisco catalytic sites during CO2 fixation. Most plant species express two Rca isoforms, the larger Rca-α and the shorter Rca-β, either by alternative splicing from a single gene or expression from separate genes. The mechanism of Rubisco activation by Rca isoforms has been intensively studied in C3 plants. However, the functional role of Rca in C4 plants where Rubisco and Rca are located in a much higher [CO2] compartment is less clear. In this study, we selected four C4 bioenergy grasses and the model C4 grass setaria ( Setaria viridis ) to investigate the role of Rca in C4 photosynthesis. All five C4 grass species contained two Rca genes, one encoding Rca-α and the other Rca-β, which were positioned closely together in the genomes. A variety of abiotic stress-related motifs were identified in the Rca-α promoter of each grass, and while the Rca-β gene was constantly highly expressed at ambient temperature, Rca-α isoforms were expressed only at high temperature but never surpassed 30% of Rca-β content. The pattern of Rca-α induction on transition to high temperature and reduction on return to ambient temperature was the same in all five C4 grasses. In sorghum ( Sorghum bicolor ), sugarcane ( Saccharum officinarum ), and setaria, the induction rate of Rca-α was similar to the recovery rate of photosynthesis and Rubisco activation at high temperature. This association between Rca-α isoform expression and maintenance of Rubisco activation at high temperature suggests that Rca-α has a functional thermo-protective role in carbon fixation in C4 grasses by sustaining Rubisco activation at high temperature.

Genomics↗

SISGR: The regulation of carbon fixation in plant and green algae: Rubisco activase and the origin of heat inactivation of CO 2 assimilation

Rubisco activase (Rca) is a critical AAA+ ATPase protein complex that remodels and promotes the Rubisco enzyme, a key player in photosynthetic performance and carbon fixation. The assembly and function of the Rca protein complex are regulated by a range of factors, including subunit concentration, nucleotide-binding states, thermal conditions, metal-ion coordination, and post-translational modifications, such as phosphorylation. Despite its importance in photosynthesis, the detailed molecular mechanisms underlying the regulation of plant Rca and how it activates Rubisco remain elusive. This project aims to bridge this knowledge gap by integrating sophisticated enzymology tools with single-molecule methods and high-resolution electron microscopy to elucidate the structure and function of plant Rca. Through these multiple approaches, we have systematically investigated how the activity of plant Rca is impacted by various factors, such as phosphorylation and metal-ion coordination. The Rca complex assembly/disassembly dynamics were captured using anti-Brownian electrokinetic (ABEL) trap-based measurements, providing unprecedented insight into its structural flexibility and diverse assembly states. Furthermore, the structural analysis of Rca through electron crystallography and single-particle cryogenic electron microscopy (cryo-EM) reveals novel assembly states of the spinach Rca, providing insight into the mechanistic action for Rubisco remodeling. By combining cutting-edge tools and approaches, this work uncovers critical aspects of Rca’s regulation and assembly, paving the way for a deeper understanding of its role in photosynthetic efficiency and the potential for enhancing carbon fixation in crops.

59 BASIC BIOLOGICAL SCIENCES↗

Microscopic characterization of alkali-silica reaction (ASR) affected recycled concrete mixtures induced by reactive coarse and fine aggregates

Alkali-silica reaction (ASR) is one of the most detrimental distress mechanisms leading to early deterioration of concrete infrastructure, creating large amounts of construction and demolition waste which however can be transformed into recycled concrete aggregates (RCA). Yet, as ASR is an ongoing distress mechanism, its potential of reoccurrence in RCA could cause adverse effects. Investigation of the crack propagation of RCA concrete revealed that the distress features vary widely thus, indicating different distress mechanisms in all RCA concrete. Concrete made of slightly damaged RCA shows the lease number of cracks yet, wider cracks at high expansion levels. Additionally, the distress in slightly damaged RCA concrete made of reactive coarse aggregate and RCA concrete made of reactive sand, regardless of original damage extent, is governed by cracks propagating through the residual cement paste whereas cracks propagate through the new cement paste in severely damaged RCA made of reactive coarse aggregate.

36 MATERIALS SCIENCE↗

Transcription factor bHLH121 regulates root cortical aerenchyma formation in maize

Root anatomical phenotypes present a promising yet underexploited avenue to deliver major improvements in yield and climate resilience of crops by improving water and nutrient uptake. For instance, the formation of root cortical aerenchyma (RCA) significantly increases soil exploration and resource capture by reducing the metabolic costs of root tissue. A key bottleneck in studying such phenotypes has been the lack of robust high-throughput anatomical phenotyping platforms. We exploited a phenotyping approach based on laser ablation tomography, termed Anatomics , to quantify variation in RCA formation of 436 diverse maize lines in the field. Results revealed a significant and heritable variation for RCA formation. Genome-wide association studies identified a single-nucleotide polymorphism mapping to a root cortex-expressed gene-encoding transcription factor bHLH121. Functional studies identified that the bHLH121 Mu transposon mutant line and CRISPR/Cas9 loss-of-function mutant line showed reduced RCA formation, whereas an overexpression line exhibited significantly greater RCA formation when compared to the wild-type line. Characterization of these lines under suboptimal water and nitrogen availability in multiple soil environments revealed that bHLH121 is required for RCA formation developmentally as well as under studied abiotic stress. Overall functional validation of the bHLH121 gene’s importance in RCA formation provides a functional marker to select varieties with improved soil exploration and thus yield under suboptimal conditions.

59 BASIC BIOLOGICAL SCIENCES↗

Impact of regadenoson-induced myocardial creep on dynamic Rubidium-82 PET myocardial blood flow quantification

Background: Repositioning of the heart during myocardial perfusion imaging (MPI) using Rubidium-82 (Rb-82) PET may occur when using regadenoson. Our aim was to determine the prevalence and the effect of correcting for this myocardial creep on myocardial blood flow (MBF) quantification. Methods: We retrospectively included 119 consecutive patients who underwent dynamic rest- and regadenoson-induced stress MPI using Rb-82 PET. The presence of myocardial creep was visually assessed in the dynamic stress PET series by identifying differences between the automatically drawn myocardium contour and the activity. Uncorrected and corrected stress MBFs were compared for the three vascular territories (LAD, LCX, and RCA) and for the whole myocardium. Results: Myocardial creep was observed in 52% of the patients during stress. Mean MBF values decreased after correction in the RCA from 4.0 to 2.7 mL/min/g (P < 0.001), in the whole myocardium from 2.7 to 2.6 mL/min/g (P = 0.01), and increased in the LAD from 2.5 to 2.6 mL/min/g (P = 0.03) and remained comparable in the LCX (P = 0.3). Conclusions: Myocardial creep is a frequent phenomenon when performing regadenoson-induced stress Rb-82 PET and has a significant impact on MBF values, especially in the RCA territory. As this may hamper diagnostic accuracy, myocardial creep correction seems necessary for reliable quantification. [French] French Abstract: Contexte: Un repositionnement du cœur lors de l’imagerie de perfusion myocardique (MPI) à l’aide de la TEP au rubidium-82 (RB-82) peut survenir lors de l’utilisation du regadenoson. Notre objectif était de déterminer la prévalence et l’effet de la correction du fluage sur la quantification du débit sanguin myocardique (DSM). Méthodes: dans cette étude rétrospective, nous avons inclus 119 patients consécutifs ayant beneficié d’un examen au repos suivi d’un stress pharamacologique au régadénoson en utilisant le RB-82. La présence de fluage myocardique a été évaluée visuellement sur les images TEP de stress dynamique en utilisant les différences entre les contours automatiques et les images myocardiques. Les DSM de stress non corrigés et corrigés ont été comparés pour les trois territoires vasculaires (coronaire gauche-CG, la circonflexe-CX, et coronaire droite-CD) et pour l’ensemble du myocarde. Résultats: le fluage myocardique a été observé chez 52% des patients sur les examens de stress. Les valeurs moyennes de DSM ont diminué après correction dans le territoire de la CD de 4,0 à 2,7 mL/min/g (p < 0,001), dans le myocarde entier de 2,7 à 2,6 mL/min/g (p = 0,01) et augmenté dans le territoire de la CG de 2,5 à 2,6 mL/min/g (p = 0,03) et est resté comparable dans le territoire de la CX (p = 0,3). Conclusions: le fluage myocardique est un phénomène fréquent lors de l’exécution du stress phramacologique au régadénoson à l’aide du RB-82. Il a un impact significatif sur les valeurs de DSM, en particulier dans le territoire de la CD. La correction du fluage myocardique semble donc nécessaire pour une quantification fiable des flux coronariens. [Spanish] Spanish Abstract: Antecedentes: El movimiento del corazón durante la imagen de perfusión miocárdica usando Rubidio-82 (Rb-82) PET puede ocurrir cuando se usa regadenosón. Nuestro enfoque fue determinar la prevalencia y efecto de la corrección de este Artefacto de movimiento en la cuantificación del flujo sanguíneo miocárdico. Métodos: Se incluyeron de forma retrospectiva 119 pacientes que se realizaron estudio dinámico en reposo y estudio de perfusión miocárdica en estrés inducido por regadenosón usando Rb-82 PET. La presencia de el artefacto de movimiento fue evaluado visualmente en el estudio en serie de PET dinámico en estrés identificando las diferencias entre el contorno miocárdico dibujado automáticamente y la actividad. La perfusión miocárdica en estrés corregida y sin corregir se compararon para los tres territorios vasculares (Descendente Anterior, Circunfleja, Coronaria Derecha) y para todo el miocardio. Resultados: El artefacto de movimiento miocárdico se observo en un 52% de los pacientes durante el estrés. El promedio de los valores de flujo sanguíneo miocárdico disminuyen después de la corrección en la arteria coronaria derecha de 4.0 a 2.7 ml/min/g (p < 0.001), en todo el miocardio de 2.7 a 2.6 mL/min/g (p = 0.01) y un aumento en la arteria descendente anterior de 2.5 a 2.6 mL/min/g (p = 0.03) y se mantuvo comparable en la arteria circunfleja (p = 0.3). Conclusiones: El artefacto de movimiento miocárdico es un fenómeno frecuente cuando se realiza la prueba de estrés inducido con regadenosón Rb-82 PET y tiene un impacto significativo en los valores de flujo sanguíneo miocárdico, principalmente en el territorio de la coronaria derecha. Esto puede disminuir la precisión diagnostica, la corección del artefacto de movimiento es necesario para una cuantificación confiable. [Chinese] Chinese Abstract: 背景: 铷-82 (Rb-82) PET心肌灌注成像 (MPI) 过程在使用类伽腺苷时可能会发生心脏重定位。我们的目的是确定心肌蠕动 (myocardial creep) 校正对心肌血流灌注定量的影响及其普遍性。 方法: 我们连续回顾了119 名使用 Rb-82 PET 进行动态的静息与类伽腺苷负荷MPI的患者。通过识别自动绘制的心肌轮廓和心肌活动之间的差异, 在动态负荷 PET 检查中肉眼评估心肌蠕动的存在。分别在已校正和未校正的负荷 MBF上, 对三个血管区域 (LAD, LCX, RCA) 和整个心肌灌注情况进行比较。 结果: 负荷检查中, 52% 的患者观察到心肌蠕动。 RCA 校正后平均MBF值从4.0降至 2.7 mL / min / g (p <0.001), 整个心肌从 2.7降至 2.6 mL / min / g (p = 0.01) , LAD 从 2.5 升至 2.6mL / min / g (p = 0.03) 并且在LCX中保持不变 (p = 0.3) 。 结论: 类伽腺苷负荷 Rb-82 PET 检查中, 心肌蠕动是一种常见的现象, 并且对 MBF 值有显著影响, 特别在 RCA 区域。这可能妨碍诊断准确性, 因此心肌蠕动校正是准确定量的必要条件。.

62 RADIOLOGY AND NUCLEAR MEDICINE↗

Microstructural analysis of recycled concrete using X-ray microtomography

This paper reports an investigation of the recycled concrete (RC) microstructure using synchrotron microtomography (μCT) at the Advanced Light Source combined with Scanning Electron Microscopy analysis. The study evaluated the influence of 50% of recycled concrete aggregate (RCA) and its water absorption compensation on the RC microstructure. The following variables were studied: a) the compressive strength of the original concrete used to obtain the RCA (40 and 80 MPa) and b) the initial moisture condition of the RCA (Saturated Surface Dry and Oven Dry). The microtomographic images showed the mixtures cast with RCA in the dry condition developed an evident macropore network surrounding the RCA particle that was not observed in the mixtures using RCA in the SSD condition. SEM images confirmed the initial findings from μCT and showed that the thickness of the interfacial transition zone in RC is in the same order of magnitude as the reference concrete.

36 MATERIALS SCIENCE↗

Overall assessment of alkali-silica reaction affected recycled concrete aggregate mixtures derived from construction and demolition waste

A large amount of research has been conducted on the reuse of construction and demolition waste (CDW) in concrete. Yet, CDW may display pre-existing damage which raises concerns on its use. In this work, coarse recycled concrete aggregate (RCA) is reclaimed from distinct members of an alkali-silica reaction (ASR) affected overpass. RCA mixtures incorporating 50 and 100% replacement are then manufactured and stored in conditions enabling further ASR development. Mechanical (Stiffness Damage Test- SDT) and microscopic (Damage Rating Index- DRI) analyses are conducted at a fixed “secondary” induced expansion. Results indicate that the overall damage of ASR-affected RCA mixtures is different from conventional concrete and depends upon the “past” RCA condition. Furthermore, the DRI can capture the “past” and “secondary” expansion while the SDT simply detects the “secondary” distress. Finally, an adapted DRI version is proposed to better evaluate and distinguish “past” and “secondary” damage in ASR-affected recycled concrete.

36 MATERIALS SCIENCE↗

Evaluation of alkali–silica reaction damage in concrete using linear and nonlinear resonance techniques

Here in this study, the initiation and development of alkali–silica reaction (ASR) in concrete prisms containing reactive coarse (RCA) and reactive fine (RFA) aggregates were monitored over one year using linear and nonlinear resonance techniques. Although the linear resonance test could detect initiation and development of ASR damage in RCA specimens, it failed in the RFA specimens. Petrographic analysis confirmed the presence of early-stage ASR damage and the presence of different microcracking patterns in the RFA and RCA specimens, which may explain differences in the linear resonance data. For both RCA and RFA specimens, the nonlinear resonance test results were able to detect the initiation of ASR damage and showed a strong correlation with the ASR expansion for all specimens from different mix designs. The results demonstrate the high sensitivity of the nonlinear resonance test and its potential for quantitative evaluation of the ASR damage state of concrete specimens without a baseline measurement.

36 MATERIALS SCIENCE↗

Single-molecule diffusometry reveals the nucleotide-dependent oligomerization pathways of Nicotiana tabacum Rubisco activase

Oligomerization plays an important role in the function of many proteins, but a quantitative picture of the oligomer distribution has been difficult to obtain using existing techniques. Here in this paper, we describe a method that combines sub-stoichiometric labeling and recently developed single-molecule diffusometry to measure the size distribution of oligomers under equilibrium conditions in solution, one molecule at a time. We use this technique to characterize the oligomerization behavior of Nicotiana tabacum (Nt) Rubisco activase (Nt-Rca), a chaperone-like AAA-plus ATPase essential in regulating carbon fixation during photosynthesis. We directly observed monomers, dimers, and a tetramer/hexamer mixture and extracted their fractional abundance as a function of protein concentration. We show that the oligomerization pathway of Nt-Rca is nucleotide dependent: ATPγS binding strongly promotes tetramer/hexamer formation from dimers and results in a preferred tetramer/hexamer population for concentrations in the 1-10 $μ$M range. Furthermore, we directly observed dynamic assembly and disassembly processes of single complexes in real time and from there estimated the rate of subunit exchange to be &sim;0.1 s -1 with ATPγS. On the other hand, ADP binding destabilizes Rca complexes by enhancing the rate of subunit exchange by >2 fold. These observations provide a quantitative starting point to elucidate the structure-function relations of Nt-Rca complexes. We envision the method to fill a critical gap in defining and quantifying protein assembly pathways in the small-oligomer regime.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Molecular mechanism of Rubisco activase: Dynamic assembly and Rubisco remodeling

Ribulose-1,5-bisphosphate (RuBP) carboxylase-oxygenase (Rubisco) enzyme is the limiting step of photosynthetic carbon fixation, and its activation is regulated by its co-evolved chaperone, Rubisco activase (Rca). Rca removes the intrinsic sugar phosphate inhibitors occupying the Rubisco active site, allowing RuBP to split into two 3-phosphoglycerate (3PGA) molecules. This review summarizes the evolution, structure, and function of Rca and describes the recent findings regarding the mechanistic model of Rubisco activation by Rca. New knowledge in these areas can significantly enhance crop engineering techniques used to improve crop productivity.

59 BASIC BIOLOGICAL SCIENCES↗

Root cause analysis of a molten salt pump in FLUSTFA

The primary salt pump installed in the high-temperature FLUoride Salt Test Facility (FLUSTFA) was successfully operated for some time, but later ceased operation. To understand what occurred, a Root Cause Analysis (RCA) was performed. Steps taken to try to get the pump operational include adjusting the shaft position, increasing the heating power of the tape heaters on the pump volute, and manually rotating the pump shaft. While removing the insulation, corrosion was noted on the outside of the pump volute, and decolorization of the insulation and tape heaters was observed. Significant corrosion products were also observed in the pump itself and the piping connected to the pump. The nitrogen cover gas was maintained from before salt was introduced into the loop until the pump was dismounted and continues to be maintained even after the pump was removed. After considering probable scenarios, causes were assigned and corrective actions were developed to prevent those causes. Then, the RCA was presented to an advisory committee for review, the “Review Committee,” consisting of experts in large molten salt systems: Brandon Haugh, David Holcomb, Kevin Robb, and Vicente Rojas. As a result, the advisory committee provided comprehensive feedback, which have been incorporated into a revised RCA. Findings have then been summarized and reported in this publication.

22 - GENERAL STUDIES OF NUCLEAR REACTORS↗

Nucleotide Dependence of Subunit Rearrangements in Short-Form Rubisco Activase from Spinach

Higher-plant Rubisco activase (Rca) plays a critical role in regulating the activity of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco). In vitro, Rca is known to undergo dynamic assembly–disassembly processes, with several oligomer stoichiometries coexisting over a broad concentration range. Although the hexamer appears to be the active form, changes in quaternary structure could play a role in Rubisco regulation. Therefore, in this work, fluorescent labels were attached to the C-termini of spinach β-Rca, and the rate of subunit mixing was monitored by measuring energy transfer as a function of nucleotide and divalent cation. Only dimeric units appeared to exchange. Poorly hydrolyzable substrate analogues provided locked complexes with high thermal stabilities (apparent T m = 60 °C) and an estimated t 1/2 of at least 7 h, whereas ATP-Mg provided tight assemblies with t 1/2 values of 30–40 min and ADP-Mg loose assemblies with t 1/2 values of <15 min. Accumulation of ADP to 20% of the total level of adenine nucleotide substantially accelerated equilibration. An initial lag period was observed with ATP·Mg, indicating inhibition of subunit exchange at low ADP concentrations. The ADP K i value was estimated to exceed the K m for ATP (0.772 ± 96 mM), suggesting that the equilibration rate is a function of the relative contributions of high- and low-affinity states. C-Terminal cross-linking generated covalent dimers, required the N-terminal extension to the AAA+ domain, and provided evidence of different classes of sites. We propose that oligomer reorganization may be stalled during periods of high Rubisco reactivation activity, whereas changes in quaternary structure are stimulated by the accumulation of ADP at low light levels.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Non-invasive ventral cervical magnetoneurography as a proxy of in vivo lipopolysaccharide-induced inflammation

Maintenance of autonomic homeostasis is continuously calibrated by sensory fibers of the vagus nerve and sympathetic chain that convey compound action potentials (CAPs) to the central nervous system. Lipopolysaccharide (LPS) intravenous challenge reliably elicits a robust inflammatory response that can resemble systemic inflammation and acute endotoxemia. Here, we administered LPS intravenously in nine healthy subjects while recording ventral cervical magnetoneurography (vcMNG)-derived CAPs at the rostral Right Nodose Ganglion (RNG) and the caudal Right Carotid Artery (RCA) with optically pumped magnetometers (OPM). We observed vcMNG RNG and RCA neural firing rates that tracked changes in TNF-α levels in the systemic circulation. Further, endotype subgroups based on high and low IL-6 responders segregate RNG CAP frequency (at 30-120 min) and based on high and low IL-10 response discriminate RCA CAP frequency (at 0-30 min). These vcMNG tools may enhance understanding and management of the neuroimmune axis that can guide personalized treatment based on an individual’s distinct endophenotype.

59 BASIC BIOLOGICAL SCIENCES↗

Strong and Efficient Consistency with Consistency-aware Durability

We introduce consistency-aware durability or C ad , a new approach to durability in distributed storage that enables strong consistency while delivering high performance. We demonstrate the efficacy of this approach by designing cross-client monotonic reads , a novel and strong consistency property that provides monotonic reads across failures and sessions in leader-based systems; such a property can be particularly beneficial in geo-distributed and edge-computing scenarios. We build O rca , a modified version of ZooKeeper that implements C ad and cross-client monotonic reads. We experimentally show that O rca provides strong consistency while closely matching the performance of weakly consistent ZooKeeper. Compared to strongly consistent ZooKeeper, O rca provides significantly higher throughput (1.8--3.3×) and notably reduces latency, sometimes by an order of magnitude in geo-distributed settings. We also implement C ad in Redis and show that the performance benefits are similar to that of C ad ’s implementation in ZooKeeper.

Computer Science↗

An extended radar relative calibration adjustment (eRCA) technique for higher-frequency radars and range–height indicator (RHI) scans

Abstract. This study extends the relative calibration adjustment technique for calibration of weather radars to higher-frequency radars as well as range–height indicator (RHI) scans. The calibration of weather radars represents one of the most dominant sources of error for their use in a variety of fields including quantitative precipitation estimation and model comparisons. While most weather radars are routinely calibrated, the frequency of calibration is often less than required, resulting in miscalibrated time periods. While full absolute calibration techniques often require the radar to be taken offline for a period of time, there have been online calibration techniques discussed in the literature. The relative calibration adjustment (RCA) technique uses the statistics of the ground clutter surrounding the radar as a monitoring source for the stability of calibration but has only been demonstrated to work at S- and C-band for plan-position indicator (PPI) scans at a constant elevation. In this work the RCA technique is modified to work with higher-frequency radars, including Ka-band cloud radars. At higher frequencies the properties of clutter can be much more variable. This work introduces an extended clutter selection procedure that incorporates the temporal stability of clutter and helps to improve the operational stability of RCA for relatively higher-frequency radars. The technique is also extended to utilize range–height scans from radars where the elevation is varied rather than the azimuth. These types of scans are often utilized with research radars to examine the vertical structure of clouds. The newly extended technique (eRCA) is applied to four Department of Energy Atmospheric Radiation Measurement (DOE ARM) weather radars ranging in frequency from C- to Ka-band. Cross comparisons of three co-located radars with frequencies C, X, and Ka at the ARM Cloud, Aerosol, and Complex Terrain Interactions (CACTI) site show that the technique can determine changes in calibration. Using an X-band radar at the ARM Eastern North Atlantic (ENA) site, we show how the technique can be modified to be more resilient to clutter fields that show increased variability, in this case due to sea clutter. The results show that this technique is promising for a posteriori data calibration and monitoring.

47 OTHER INSTRUMENTATION↗