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Investigating the Relationship Between Liquid Water and Leaf Area in Clonal Populus

Leaf Area Index (LAI) is one of the most commonly employed biophysical parameters used to characterize vegetation canopies and scale leaf physiological processes to larger scales. For example, LAI is a critical parameter used in regional scale estimates of evapotranspiration, photosynthesis, primary productivity, and carbon cycling (Running et al., 1989; Dorman and Sellers, 1989; Potter et al., 1993). LAI is typically estimated using ratio-based techniques, such as the Normalized Difference Vegetation Index (NDVI: e.g. Tucker 1979; Asrar et al., 1989; Sellers 1985, 1987). The physical basis behind this relationship depends on the high spectral contrast between scattered near-infrared (NIR) and absorbed red radiation in canopies. As the number of leaves present in a canopy increases over a unit area, NIR reflectance increases, while red reflectance decreases, resulting in an increase in the ratio. Through time series and image compositing, NDVI provides an additional temporal measure of how these parameters change, providing a means to monitor fluxes and productivity (Tucker et al., 1983). NDVI, while highly successful for agriculture and grassland ecosystems has been found to be less successful in evergreen chaparral and forested ecosystems (Badhwar et al., 1986; Gamon et al., 1993; Hall et al., 1995). Typically, the relationship between NDVI and LAI becomes progressively more asymptotic at LAI values above three (Sellers, 1985), although linear relationships have been observed in conifers at LAis as high as 13 (Spanner et al., 1990). In this paper, we explore an alternative approach for estimating LAI for remotely sensed data from AVIRIS based on estimates of canopy liquid water. Our primary objective is to test the hypothesis that the depth of the liquid water bands expressed in canopy reflectance spectra at 960, 1200, 1400 and 1900 nm increases with increasing LAI in canopies. This study builds from work by Roberts et al. (1997), in which liquid water was shown to increase following a gradient of increasing LAI ranging from grasslands to coniferous forests. In that study, it was observed that forests, which showed little variation in NDVI, showed significant variation in liquid water. In order to test this hypothesis, we analyzed field spectra measured over Populus resprouts of known LAI and monitored changes in liquid water in young Populus stands as they aged over a 4-year time span. The study was conducted in south-central Washington, in a clonal Populus fiber farm owned and operated by Boise-Cascade near the town of Wallula.

Roberts, Dar

Effects of Elevated CO2 Concentration on Photosynthesis and Respiration of Populus Deltodies

To determine how increased atmospheric CO2 will affect the physiology of cottonwood trees, cuttings of the cloned Populus deltodies [cottonwood] were grown in open-top chambers containing ambient or elevated CO2 concentration. The control treatment was maintained at ambient Biosphere 2 atmospheric CO2 (c. 450 +/- 50 micro l/l), and elevated CO2 treatment was maintained at approximately double ambient Biosphere 2 atmospheric CO2 (c. 1000 +/- 50 micro l/l). The effects of elevated CO2 on leaf photosynthesis, and stomatal conductance were measured. The cottonwoods exposed to CO2 enrichment showed no significant indication of photosynthetic down-regulation. There was no significant difference in the maximum assimilation rate between the treatment and the control (P less than 0.24). The CO2 enriched treatment showed a decreased stomatal conductance of 15% (P less than 0.03). The elevated CO2 concentrated atmosphere had an effect on the respiration rates of the plants; the compensation point of the treatment was on average 13% higher than the control (P less than 0.01).

Anderson, Angela M.

Monitoring environmental state of Alaskan forests with AIRSAR

During March 1988 and May 1991, the JPL airborne synthetic aperture radar, AIRSAR, collected sets of multi-temporal imagery of the Bonanza Creek Experimental Forest near Fairbanks, Alaska. These data sets consist of series of multi-polarized images collected at P-, L-, and C-bands each over a period of a few days. The AIRSAR campaigns were complemented with extensive ground measurements that included observations of both static canopy characteristics such as forest architecture as well as properties that vary on short term time scales such as canopy dielectric conditions. Observations exist for several stands of deciduous and coniferous species including white spruce (Picea glauca), black spruce (Picea mariana), and balsam poplar (Populus balsamifera). Although the duration of each campaign was fairly short, significant changes in environmental conditions caused notable variations in the physiological state of the canopies. During the 1988 campaign, environmental conditions ranged from unseasonably warm to more normal subfreezing temperatures. This permitted AIRSAR observations of frozen and thawed canopy states. During May 1991, ice jams that occurred along the river caused many stands to flood while the subsequent clearing of the river then allowed the waters to recede, leaving a snow covered ground surface. This allowed observations of several stands during both flooded and nonflooded conditions. Furthermore, the local weather varied from clear sunny days to heavy overcast days with some occurrence of rain. Measurements of leaf water potential indicated that this caused significant variations in canopy water status, allowing SAR observations of water stressed and unstressed trees. Mean backscatter from several stands is examined for the various canopy physiological states. The changes in canopy backscatter that occur as a function of environmental and physiological state are analyzed. Preliminary results of a backscatter signature modeling analysis are presented. The implications of using SAR to monitor canopy phenological state are addressed.

Mcdonald, Kyle C.

Dependence of Photosynthetic Capacity, Photosynthetic Pigment Allocation, and Carbon Storage on Nitrogen Levels in Foliage of Aspen Stands

The role of foliar nitrogen (N) in the seasonal dynamics and vertical canopy distribution of photosynthetic pigments, photosynthetic capacity, and carbon (C) storage was investigated in boreal broadleaved species. The study was conducted at two different aged stands (60 y and 15 y) in 1994 and 1996 in Saskatchewan, Canada as part of the Boreal Ecosystem-Atmosphere Study (BOREAS). Foliage in upper and lower strata was examined for aspen (Populus tremuloides Michx.) and its associated hazelnut shrub (Corylus americana Walt.). We determined that C accumulation, expressed as dry mass per unit leaf area (mg C cm (exp -2)), was linearly dependent on N content (approximately 0.3- 3.5 mg N cm (exp -2))(r (exp 2) = 0.93, n=383, P less than 0.001) when eleven foliage groups were defined according to species, site, and developmental stage. C assembly was greatest in the upper aspen strata of both sites (seasonal average, 40.1 plus or minus 0.6 mg C cm (exp -2)), intermediate in the lower aspen strata (32.7 plus or minus 0.6), and considerably lower, and similar, in the hazelnut shrub layers (23.7 plus or minus 0.6) and in expanding aspen leaves (23.8 plus or minus 0.5); the lowest C assembly per unit N occurred in the two youngest, emerging leaf groups (17.1 plus or minus 0.6). Other relationships among physiological and biochemical variables were typically non-linear and were confounded by inclusion of the three groups of young (i.e., emerging or expanding) leaves, unless these were separately identified. Net C uptake, measured as photosynthetic capacity (A (sub max), micromole CO2 m (exp -2) s (exp -1)), was greater in aspen throughout the season, and optimal in mid-summer at a C:N ratio of approximately 18 (approximately 2.3 %N). When young leaves were excluded and logarithms of both variables were used, A (sub max) was approximately linearly dependent on N (mg N cm (exp-2) (r (exp 2) = 0.85, n= 193, P less than 0.001), attributed to incorporation of N into photosynthetic complexes and enzymes. In mature leaves, differences in pigment content vs. N among canopy strata were accentuated when N was expressed per unit leaf area (Mg cm (exp -2)) . However, the simplest log-linear relationship between a pigment variable and N was obtained for a ratio describing the relative allocation of photosynthetic pigment to Chl a (Chl a/[Chl b + carotenoids], microgram cm (exp -2)/ microgram cm-2) vs. %N (r (exp 2) = 0.90, n=343, P less than 0.001). Attainment of comparable A (sub max) Chl a content and relative Chl a allocation per unit N (mg cm (exp -2)) was achieved at different foliar N levels per canopy group: the lowest N requirement was for hazelnut leaves in the lowest, shaded stratum at the older, closed canopy site; the highest N requirement was in aspen leaves of the upper-most stratum at the younger, more open canopy site. These results highlight the differences in physiological responses between young and fully expanded leaves and show that sustaining those foliar constituents and processes important to C balance may require higher foliar N levels in leaves of establishing vs. mature aspen stands. There may be implications for remote-sensing assessments made for carbon balance in springtime, or over a landscape mosaic comprised of different aged stands.

Middleton, Elizabeth M.

The Relationship of Forest Fires Detected by MODIS and SRTM Derived Topographic Features in Central Siberia

Fires are a common occurrence in the Siberian boreal forest. The MOD14 Thermal anomalies product of the Terra MODIS Moderate Resolution Spectroradiometer) product set is designed to detect thermal anomalies (i.e. hotspots or fires) on the Earth's surface. Recent field studies showed a dependence of fire occurrence on topography. In this study MODIS thermal anomaly data and SRTM topography data were merged and analyzed to evaluate if forest fires are more likely to occur at certain combinations of elevation, slope and aspect. Using the satellite data over a large area can lead to better understanding how topography and forest fires are related. The study area covers a 2.5 Million krn(exp 2) portion of the Central Siberian southern taiga from 72 deg to 110 deg East and from 50 deg to 60 deg North. About 57% of the study area is forested and 80% of the forest grows between 200 and 1000 m. Forests with pine (Pinus sylvestris), larch (Larix sibirica, L. gmelinii), Siberian pine (Pinus sibirica), spruce (Picea obovata.) and fir (Abies sibirica) cover most of the landscape. Deciduous stands with birch (Betula pendula, B. pubescens) and aspen (Populus tremula) cover the areas of lower elevation in this region. The climate of this area is distinctly continental with long, cold winters and short hot summers. The tree line in this part of the world is around 1500 m in elevation with alpine tundra, snow and ice fields and rock outcrops extending up to over 3800 m. A 500 m resolution landcover map was developed using 2001 MODIS MOD13 Normalized Vegetation Index (NDVI) and Middle Infrared (MIR) products for seven 16-day periods. The classification accuracy was over 87%. The SRTM version 2 data, which is distributed in 1 degree by 1 degree tiles were mosaiced using the ENVI software. In this study, only those MODIS pixels were used that were flagged as "nominal or high confidence fire" by the MODIS fire product team. Using MODIS data from the years 2000 to 2005 along with the improved Shuttle Radar Topographic Mission (SRTM) version 2 data at 100 m resolution, the distribution of hot spots was examined by elevation, slope and aspect as well as by forest type. The results show that more forest area burns at lower elevations but a larger percentage of the available forest area burns at higher elevations. This is probably because steep slopes occur at higher elevations. Fires are only more common on slopes with a southern exposure if the slope is steeper than 15 degrees. The next step in this study will be to monitor areas where the risk of fire is high (steep slopes with a southern exposure) and to refine this method by incorporating anthropogenic features for more accurate fire disturbance monitoring.

Ranson, Jon K.

Persistent Effects of Fire Severity on Early Successional Forests in Interior Alaska

There has been a recent increase in the frequency and extent of wildfires in interior Alaska, and this trend is predicted to continue under a warming climate. Although less well documented, corresponding increases in fire severity are expected. Previous research from boreal forests in Alaska and western Canada indicate that severe fire promotes the recruitment of deciduous tree species and decreases the relative abundance of black spruce (Picea mariana) immediately after fire. Here we extend these observations by (1) examining changes in patterns of aspen and spruce density and biomass that occurred during the first two decades of post-fire succession, and (2) comparing patterns of tree composition in relation to variations in post-fire organic layer depth in four burned black spruce forests in interior Alaska after 10-20 years of succession.Wefound that initial effects of fire severity on recruitment and establishment of aspen and black spruce were maintained by subsequent effects of organic layer depth and initial plant biomass on plant growth during post-fire succession. The proportional contribution of aspen (Populus tremuloides) to total stand biomass remained above 90% during the first and second decades of succession in severely burned sites, while in lightly burned sites the proportional contribution of aspen was reduced due to a 40- fold increase in spruce biomass in these sites. Relationships between organic layer depth and stem density and biomass were consistently negative for aspen, and positive or neutral for black spruce in all four burns. Our results suggest that initial effects of post-fire organic layer depths on deciduous recruitment are likely to translate into a prolonged phase of deciduous dominance during post-fire succession in severely burned stands. This shift in vegetation distribution has important implications for climate-albedo feedbacks, future fire regime, wildlife habitat quality and natural resources for indigenous subsistence activities in interior Alaska.

Shenoy, Aditi

Water Use and Requirements of PtFT1 Plums for Long Duration Space Missions

Early applications of bioregenerative life support technologies for space exploration will likely start with supplemental food production for the crew. This could include fresh, perishable foods that cannot be stored for long and but have a high impact on the diet acceptability bioavailable nutrients. Because of the limited working volume in spacecraft, these plants must be small in size. A combination of CIF (Center Innovation Fund) and NASA Post Doctoral funding was used in FY15 to develop horticultural approaches for propagation, production and fruiting of several dwarf plum lines and evaluate their suitability as candidates for long duration space missions. Collaborators at the USDA Agricultural Research Service transformed Prunus domestica with the FT1 (Flowering Locus T1) flowering gene from Populus trichocarpa (PtFTl), which resulted in early flowering, driving the plant out of its juvenile growth phase and into reproductive development years earlier than would normally occur. The result is a plum line that has potential as a component of food production system on long-duration space missions since it completes complete generation (seed-to-seed) within less than a year and maintains a dwarf-bush or vine-like growth habit. Further, there appears to be no obligatory requirement for a dormancy period, resulting in continuous fruit production on a given plant. This potential is described in Graham et al (2015, in press).

plant growt

Southern Colorado Disasters: Using NASA Observations to Map Aspen Extent and Recovery Due to Wildfire

Quaking aspen (Populus tremuloides) is an important species for wildlife, watershed health, and ecosystem resilience across its range. Heavy ungulate browsing and factors influenced by a changing climate including seasonal temperature changes and moisture deficit have led to reduced post-fire aspen regeneration rates in southern Colorado. This project partnered with Trinchera Ranch and the Colorado State Forest Service to estimate aspen recovery after the Spring Creek Fire, which ignited in June of 2018. The Southern Colorado Disasters team utilized field measurements and satellite imagery from Landsat Operational Land Imager (OLI), Sentinel-2 MultiSpectral Instrument (MSI), and the Shuttle Radar Topography Mission (SRTM) to train and run several random forest models that detect pre- and post-fire aspen extent. Ocular sampling of over 500 points on high-resolution pre-fire and post-fire images identified percentage aspen cover in 30 x 30-meter grid cells. This process provided training data for regression models, which were able to detect aspen across the landscape for both time periods using multiple remote sensing vegetation health indices. In addition, landscape suitability for aspen regeneration was modeled to provide a guide for managers on where to monitor for aspen regeneration post-fire.

DEVELOP Project Summary

Southern Colorado Disasters: Using NASA Earth Observations to Map Aspen Extent and Recovery Due to Wildfire

Quaking aspen (Populus tremuloides) is an important species for wildlife, watershed health, and ecosystem resilience across its range. Heavy ungulate browsing and factors influenced by a changing climate including seasonal temperature changes and moisture deficit have led to reduced post-fire aspen regeneration rates in southern Colorado. This project partnered with Trinchera Ranch and the Colorado State Forest Service to estimate aspen recovery after the Spring Creek Fire, which ignited in June of 2018. The Southern Colorado Disasters team utilized field measurements and satellite imagery from Landsat Operational Land Imager (OLI), Sentinel-2 MultiSpectral Instrument (MSI), and the Shuttle Radar Topography Mission (SRTM) to train and run several random forest models that detect pre- and post-fire aspen extent. Ocular sampling of over 500 points on high-resolution pre-fire and post-fire images identified percentage aspen cover in 30 x 30-meter grid cells. This process provided training data for regression models, which were able to detect aspen across the landscape for both time periods using multiple remote sensing vegetation health indices. In addition, landscape suitability for aspen regeneration was modeled to provide a guide for managers on where to monitor for aspen regeneration post-fire.

DEVELOP Technical Paper

Importance of Tree- and Species-Level Interactions With Wildfire, Climate, and Soils in Interior Alaska: Implications for Forest Change Under A Warming Climate

The boreal zone of Alaska is dominated by interactions between disturbances, vegetation, and soils. These interactions are likely to change in the future through increasing permafrost thaw, more frequent and intense wildfires, and vegetation change from drought and competition. We utilize an individual tree-based vegetation model, the University of Virginia Forest Model Enhanced (UVAFME), to estimate current and future forest conditions across sites within interior Alaska. We updated UVAFME for application within interior Alaska, including improved simulation of permafrost dynamics, litter decay, nutrient dynamics, fire mortality, and post-fire regrowth. Following these updates, UVAFME output on species-specific biomass and stem density was comparable to inventory measurements at various forest types within interior Alaska. We then simulated forest response to climate change at specific inventory locations and across the Tanana Valley River Basin on a 2 × 2 km2 grid. We derived projected temperature and precipitation from a five-model average taken from the CMIP5 archive under the RCP 4.5 and 8.5 scenarios. Results suggest that climate change and the concomitant impacts on wildfire and permafrost dynamics will result in overall decreases in biomass (particularly for spruce (Picea spp.)) within the interior Tanana Valley, despite increases in quaking aspen (Populus tremuloides) biomass, and a resulting shift towards higher deciduous fraction. Simulation results also predict increases in biomass at cold, wet locations and at high elevations, and decreases in biomass in dry locations, under both moderate (RCP 4.5) and extreme (RCP 8.5) climate change scenarios. These simulations demonstrate that a highly detailed, species interactive model can be used across a large region within Alaska to investigate interactions between vegetation, climate, wildfire, and permafrost. The vegetation changes predicted here have the capacity to feed back to broader scale climate-forest interactions in the North American boreal forest, a region which contributes significantly to the global carbon and energy budgets.

forest modeling

Leaf-level chlorophyll fluorescence and reflectance spectra of high latitude plants

Little is known about the chlorophyll fluorescence spectra for high latitude plants. A FluoWat leaf clip was used to measure leaf-level reflectance and chlorophyll fluorescence spectra of leaves of common high latitude plants to examine general spectral characteristics of these species. Fluorescence yield (Fyield) was calculated as the ratio of the emitted fluorescence divided by the absorbed radiation for the wavelengths from 400 nm up to the wavelength of the cut-off for the FluoWat low pass filter (either 650 or 700 nm). The Fyield spectra grouped into distinctly different patterns among different plant functional types. Black spruce (Picea mariana) Fyield spectra had little red fluorescence, which was reabsorbed in the shoot, but displayed a distinct far-red peak. Quaking aspen (Populus tremuloides) had both high red and far-red Fyield peaks, as did sweet coltsfoot (Petasites frigidus). Cotton grass (Eriophorum spp.) had both red and far-red Fyield peaks, but these peaks were much lower than for aspen or coltsfoot. Sphagnum moss (Sphagnum spp.) had a distinct Fyield red peak but low far-red fluorescence. Reindeer moss lichen (Cladonia rangiferina) had very low fluorescence levels, although when damp displayed a small red Fyield peak. These high latitude vegetation samples showed wide variations in Fyield spectral shapes. The Fyield values for the individual red or far-red peaks were poorly correlated to chlorophyll content, however the ratio of far-red to red Fyield showed a strong correlation with chlorophyll content. The spectral variability of these plants may provide information for remote sensing of vegetation type but may also confound attempts to measure high latitude vegetation biophysical characteristics and function using solar induced fluorescence (SIF).

K Fred Huemmrich

Yellowstone Ecological Forecasting: Assessing Change in Aspen Extent in Northern Yellowstone National Park

The removal and reintroduction of the gray wolf (Canis lupus) in Yellowstone National Park have played an important role in shaping the ecological composition of this distinct landscape, and it is a textbook example of multi-trophic dynamics. With particular importance to conservation science, the inter-trophic cascades between wolves and species such as the elk (Cervus canadensis) and the quaking aspen (Populus tremuloides) have been extensively studied. In conjunction with the National Park Service, Yellowstone National Park, Utah State University, and the University of Wisconsin–Stevens Point, this project utilized satellite remote sensing to investigate the long-term trends in aspen extent. Through random forest modeling and phenological approaches, Sentinel-2 Multispectral Instrument (MSI; years 2017–2019) and Landsat 5 Thematic Mapper (TM; years 1987–2011) datasets were used to derive an Enhanced Vegetation Index (EVI), a Normalized Difference Vegetation Index (NDVI), Tasseled Cap Indices (Brightness, Greenness, Wetness), and RGB true color composites. The International Space System Global Ecosystem Dynamics Investigation (ISS GEDI) was used to analyze canopy height. Results were consolidated into maps and time-series that provide an in-depth and intricate depiction of aspen stand extent. The end products will assist the National Park Service in its management practices and inform wildlife restoration and rewilding decisions within and beyond the contexts of Yellowstone National Park.

Kyle Steen

Yellowstone Ecological Forecasting: Assessing Change in Aspen Extent in Northern Yellowstone National Park

The removal and reintroduction of the gray wolf (Canis lupus) in Yellowstone National Park have shaped the ecological composition of this distinct landscape, representing a textbook example of trophic dynamics. With particular importance to conservation science, researchers have studied the trophic cascades between wolves and species such as elk (Cervus canadensis) and quaking aspen (Populus tremuloides). In conjunction with the National Park Service, Yellowstone National Park, Utah State University, and the University of Wisconsin–Stevens Point, this project utilized satellite remote sensing to investigate the long-term trends in aspen extent. Through random forest modeling and phenological approaches, Landsat 5 Thematic Mapper (TM; years 1986–2011) and Sentinel-2 Multispectral Instrument (MSI; years 2017–2019) datasets were used to derive color composites, Normalized Difference Vegetation Index (NDVI), Enhanced Vegetation Index (EVI), and Tasseled Cap Indices (Brightness, Greenness, Wetness). The International Space System (ISS) Global Ecosystem Dynamics Investigation (GEDI) provided canopy height data. The team consolidated results into maps and time-series which provide an in-depth depiction of aspen stand extent. The National Park Service will use these end products to assist in its management practices and inform wildlife restoration decisions within and beyond Yellowstone National Park.

Kyle Steen

Effects of Water Limitation and Competition on Tree Carbon Allocation in an Earth System Modeling Framework

Earth system models (ESMs) have a limited capacity to represent plant functional diversity and shifts in trait distributions. Approaches to improving the representation of this complexity in ESMs include (i) optimality-based approaches that predict trait–environment responses and (ii) explicitly modelling coexistence and community assembly. These approaches are expected to converge only when optimality-based approaches identify competitively dominant strategies, which often differ from strategies that maximize ecosystem functioning or fitness components in monoculture. We used two models, LM3-PPA (a vegetation demographic model designed as an ESM component) and BiomeE (a computationally efficient analog for LM3-PPA), to explore how water limitation affects carbon allocation strategies of canopy trees. We compared competitive allocation strategies and those that maximize biomass or productivity in monoculture. We did not explicitly model coexistence or community assembly. Rather, we used model experiments to identify competitive and maximizing strategies in a two-dimensional trait space under different precipitation and mortality scenarios. At 10 eastern US locations, we simulated historical, wet and dry climate scenarios, novel drought and three different mortality scenarios (low, medium or high sensitivity to water deficit). For each site and scenario, we identified the competitive strategy and three maximizing strategies (maximum biomass, productivity or drought-tolerance). Root: leaf ratios tended to increase and leaf area tended to decrease with increasing water stress (increasing water limitation and its effects on mortality). However, relative to maximizing strategies, competitive strategies shifted towards greater allocation to roots and leaves with increasing water stress. Competitive overinvestments (greater allocation to roots and leaves by competitive strategies compared with maximizing strategies) were robust across different modelling contexts, including vegetation parameter sets (Acer vs. Populus), models (LM3-PPA vs. BiomeE) and uncalibrated vs. calibrated BiomeE versions. Synthesis: The theoretical prediction that competitive and maximizing allocation strategies differ under water limitation is confirmed for a demographic model designed as an ESM component. Optimality-based trait predictions can simplify representing trait diversity in ESMs but do not always correspond to competitive outcomes. Explicitly modelling coexistence and community assembly in ESMs is challenging but is likely the most general approach to representing trait diversity.

vegetation demographic model