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Characterization of marine macroalgae by fluorescence signatures

The feasibility of distinguishing macroalgal classes by their fluorescence signatures was investigated using narrow-waveband light to excite groups of accessory pigments in brown, red, and green macroalgae and measuring fluorescence emission at 685 nm. Results obtained on 20 marine macroalgae field-collected samples showed that fluorescence excitation signatures were relatively uniform within phylogenetic classes but were substantially different for different classes. It is suggested that it may be possible to characterize the type and the abundance of subtidal macroalgae from low-flying aircraft using existing laser-induced fluorescence methodology.

Topinka, J. A.

Using commercial high-resolution satellite imagery to monitor a nuisance macroalga in the largest marine protected area in the U.S.A.

Satellite imagery is a useful tool for monitoring and mapping the distribution of invasive or nuisance algal species on coral reefs over the temporal and spatial scales needed for ecosystem management. Visual inspections of high-resolution satellite imagery were used to detect the newly discovered nuisance alga, Chondria tumulosa , at Manawai (Pearl and Hermes Atoll) in combination with ground-truthing surveys. Low-albedo (“dark”) survey sites on spur habitats were associated with mean C. tumulosa cover seven times higher than adjacent high-albedo (“light”) sites. There was an inverse relationship between C. tumulosa percent cover at ground-truthing sites and mean reflectance values. Archival satellite imagery showed that areas of high C. tumulosa cover (i.e., dark patches) were not evident on or before 2015 on the northeast backreef. This case study is the first to apply satellite imagery to target a nuisance red macroalgal bloom on a coral reef. The ability to use satellites for the detection of nuisance or invasive benthic species, such as expansive mats of C. tumulosa , provides managers with a valuable tool, especially in remote regions.

Invasive

Terrestrial sedimentation impact on coral and macroalgal cover in Puerto Rico's southwest coral reefs.

The coral reefs in southwest Puerto Rico (PR) have faced coral cover reduction in the last decades due to changes in its environment that can be related to sedimentation entrance resulting from anthropogenic activities in the watershed (i.e., agriculture and urban development). The Guánica Bay and La Parguera reef platforms are two natural reserves important for recreational and fishing activities. Nonetheless, their respective coral cover has decreased dramatically. Data from a previous NASA-funded project (HICE-PR) conducted between 2014-2018 was analyzed to better understand how the terrigenous sedimentation can affect the coral reef benthic composition in Guánica Bay and La Parguera. A one-way Nested ANOVA and a Tukey's HSD analyses were applied to find differences in benthic cover composition within and among the sites and location. The preliminary results showed differences in coral cover and macroalgae cover between the platforms reefs sites. The coral cover in La Parguera was higher and averaged 11.5% compared to that of Guánica (8.6%), while the macroalgae cover followed a similar pattern. Both coral cover and macroalgae in La Parguera and Guánica varied between from 2016 to 2018 with a general trend of increased coral cover in La Parguera and increase in macroalgae in Guánica. These trends can be related to the distance to the coastline as those reefs located closer to the coastline showed a greater percentage in macroalgal cover than those located farther. Cover of macroalgae and corals at reefs located a mid-distance to the coastline varied with no definite pattern detected. These results will be further correlated with variations in water quality obtained from remotely-sensed data (patterns of chlorophyll a, total suspended sediments, vertical attenuation coefficient) to support the prediction and tracking of coral cover changes in PR's southwest region.

macroalgal

River streamflow, remotely-sensed water quality, and benthic composition of previously undescribed nearshore coral reefs in northern Puerto Rico

Land-based sediment stress represents a threat to many coral reefs in Puerto Rico primarily as a result of unrestricted land cover/land use changes and poor best management practices. The effects of such stresses have been documented along most coasts around the island. However, little attention has been paid to reefs located on the north coast, and very little is known about their composition and current state. Here, we present a study characterizing riverine inputs, water quality conditions, and benthic composition of two previously undescribed coral reefs (Tómbolo and Machuca reefs) located just eastward of the Río Grande de Manatí outlet in north-central Puerto Rico. This study utilizes a time series of remotely sensed ocean color products (diffuse vertical attenuation coefficient at 490 nm [Kd490] and chlorophyll-a concentration [Chl-a] estimated with data from the Visible Infrared Imaging Radiometer Suite [VIIRS]) to characterize water quality in this coastal region. In general, the months with relatively high mean daily river streamflow also coincide with months having the highest proportion of eastward wave direction, which can promote the eastward influence of river waters towards the two coral reefs sites. Kd490 and Chl-a showed a higher riverine influence closer to the watershed outlet. Kd490 and Chl-a monthly peaks also coincide with river streamflow highs, particularly at those pixels closer to shore. Tómbolo Reef, located farther eastward of the river outlet, shows a well-developed primary reef framework mainly composed of threatened reef-building species (Acropora palmata, Pseudodiploria) and high coral cover (19-51%). The benthos of Machuca Reef, located closer to the river outlet, is dominated by macroalgae with a significantly lower coral cover (0.2-2.7%) mainly composed of “weedy” coral species (Porites astroides, and S. radians). Cover of major benthic components correlates with distance from the river outlet, and with gradients in Kd490 and Chl-a, with higher coral cover and lower macroalgal cover farther from the river outlet. Coral cover at Tómbolo Reef is higher than what has been reported for similar sites around Puerto Rico and other Caribbean islands showing its ecological importance and, as up until now, an unrecognized potential refuge of reef-building threatened coral species.

benthic cover

Methyl halide production associated with kelp

Methyl halides (MeX) are important trace constituents of the atmosphere because they, mostly MeCl, have a major impact on the atmospheric ozone layer. Also, MeCl may account for 5 pct. of the total Cl budget and MeI may have a central role in the biogeochemical cycling of iodine. High MeI concentrations were found in seawater from kelp beds and it has been suggested that MeI is produced by kelps and that MeI and MeBr along with numerous other halocarbons were released by non-kelp marine macroalgae. The objective was to determine if kelps (and other seaweeds) are sources of MeX and to assess their contribution to the estimated global source strength (EGSS) of MeX. Although the production of MeX appears to be associated with kelp, microbes involved with kelp degradation also produce MeX. Microbial MeX production may be of global significance. The microbial MeX production potential, assuming annual kelp production equals kelp degradation and 100 pct. conversion of kelp halides to MeX, is approx. 2 x the EGSS. This is not achieved but indicates that microbial production of MeX may be of global significance.

Dastoor, Minoo N.

Discovery of Chlorophyll d : Isolation and Characterization of a Far-Red Cyanobacterium from the Original Site of Manning and Strain (1943) at Moss Beach, California

We have isolated a chlorophyll-d-containing cyanobacterium from the intertidal field site at Moss Beach, on the coast of Central California, USA, where Manning and Strain (1943) originally discovered this far-red chlorophyll. Here, we present the cyanobacterium’s environmental description, culturing procedure, pigment composition, ultrastructure, and full genome sequence. Among cultures of far-red cyanobacteria obtained from red algae from the same site, this strain was an epiphyte on a brown macroalgae. Its Q y in vivo absorbance peak is centered at 704–705 nm, the shortest wavelength observed thus far among the various known Acaryochloris strains. Its Chl a /Chl d ratio was 0.01, with Chl d accounting for 99% of the total Chl d and Chl a mass. TEM imagery indicates the absence of phycobilisomes, corroborated by both pigment spectra and genome analysis. The Moss Beach strain codes for only a single set of genes for producing allophycocyanin. Genomic sequencing yielded a 7.25 Mbp circular chromosome and 10 circular plasmids ranging from 16 kbp to 394 kbp. We have determined that this strain shares high similarity with strain S15, an epiphyte of red algae, while its distinct gene complement and ecological niche suggest that this strain could be the closest known relative to the original Chl d source of Manning and Strain (1943). The Moss Beach strain is designated Acaryochloris sp. (marina) strain Moss Beach.

chlorophyll d