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At least 19 records
All sourcesNASA NTRSDOE OSTI
DOE OSTI2020

Patterns in extracellular enzyme activity and microbial diversity in deep-sea Mediterranean sediments

Deep-sea sediments are populated by diverse microbial communities that derive their nutritional requirements from the degradation of organic matter. Extracellular hydrolytic enzymes play a key role in the survival of microbes by enabling them to access and degrade complex organic compounds that are found in seafloor sediments. Despite their importance, extracellular enzymatic activity is poorly characterized at water depths greater than a few hundred meters where physical properties, such as pressure and temperature, create a unique environment for influencing enzyme behavior. In this work, we investigated microbial communities and enzyme activities in surface sediment collected at four sampling stations in the central Mediterranean Sea at water depths ranging from 800 to 2200 m. Fluorometric assays revealed that extracellular hydrolytic activity varied according to substrate type and water depth which suggests that the distributions of these enzymes within this basin are not homogenous. Furthermore, enzyme activities indicated substantial demand for phosphomonoesters and proteins, with measurable but much lower demand for polysaccharides. Barcoded amplicon sequencing of bacterial and archaeal SSU genes revealed that microbial communities varied across sampling stations and some groups displayed water-depth related trends. Our results demonstrate that heterotrophic capabilities of microbes in deep-sea Mediterranean sediments can differ substantially even within the same region.

16S rRNA↗
DOE OSTI2021

Basin scale distributions of dissolved manganese, nickel, zinc and cadmium in the Mediterranean Sea

Samples for dissolved trace metal concentrations were collected during GEOTRACES expedition GA04-N in summer/spring in the Mediterranean Sea, starting in the Atlantic Ocean and sampling both deep basins of the Mediterranean Sea. Outflow of Mediterranean Outflow Water leads to elevated concentrations of Mn, Ni and Zn in the Atlantic Ocean, but a concentration minimum in the Atlantic distribution of Cd. Nevertheless, when comparing the in- and outflow, the Mediterranean is a net source of Cd to the Atlantic Ocean. Surface concentrations of Mn, Ni, Zn and Cd are elevated in the Mediterranean relative to the Atlantic Ocean where Ni and Cd gradually increased along the eastward surface water flow path, Zn reached a homogenous concentration in the order of 1 to 1.5 nM, and Mn displayed a patchy surface distribution. The observed differences are attributable to the different dynamics of their biogeochemical cycling, notably the partitioning between the dissolved and particulate phases due to biological uptake, scavenging and possibly organic complexation. The elevated surface concentrations of Mn, Ni, Zn and Cd in the Mediterranean are derived from atmospheric deposition, where most likely Zn and Cd are mainly sourced from anthropogenic origin, Mn mostly from lithogenic origin and Ni from both anthropogenic and lithogenic origin. Dissolved Zn and Cd, as well as phosphate and nitrate, display striking inter-basin fractionations with elevated concentrations in the deep water of the western basin compared to the deep eastern basin, without a coinciding increase in the apparent oxygen utilization. Given that physical circulation or contribution from biogenic particulate metals cannot explain the elevated dissolved concentrations, an external non-biological source is required. This source is most likely a vertical flux of metal laden particles dissolving through the water column of the western Mediterranean where these particles, most likely from anthropogenic origin, are derived from either atmospheric deposition or particulate material deposited on the continental shelves that makes its way into the deep basin. Furthermore, to confirm or detect trends in dissolved metal concentrations in the deep basin, regular basin wide assessments of the trace metal distributions in the Mediterranean are needed. The distributions of Mn, Ni, Zn and Cd in the Sea of Marmara illustrate that all of these metals can be affected by anthropogenic surface sources and highlight the different susceptibilities of the dissolved metal distributions to supply from remineralization, and to removal through scavenging. This study provides a first baseline to assess future changes and underlines that the Mediterranean marine environment is susceptible to anthropogenic disturbances, with varying effects for different metals due to differing source strengths and biogeochemical cycles.

58 GEOSCIENCES↗
DOE OSTI2015

POPs in free-ranging pilot whales, sperm whales and fin whales from the Mediterranean Sea: Influence of biological and ecological factors

The pilot whale Globicephala melas, the sperm whale Physeter macrocephalus, and the fin whale Balaenoptera physalus are large cetaceans permanently inhabiting the Mediterranean Sea. These species are subjected to numerous anthropogenic threats such as exposure to high levels of contaminants. Therefore, selected persistent organic pollutants POPs (29 PCBs, 15 organochlorine compounds, 9 PBDEs and 17 PCDD/Fs) were analysed in blubber biopsies of 49 long-finned pilot whales, 61 sperm whales and 70 fin whales sampled in the North Western Mediterranean Sea (NWMS) from 2006 to 2013. Contamination profile and species feeding ecology were then combined through the use of stable isotopes. δ{sup 13}C, δ{sup 15}N values and POPs levels were assessed through IR-MS and GC–MS respectively. To assess the toxic potency of the dioxin-like compounds, the TEQ approach was applied. δ{sup 15}N values were 12.2±1.3‰ for sperm whales, 10.5±0.7‰ for pilot whales and 7.7±0.8‰ in fin whales, positioning sperm whales at higher trophic levels. δ{sup 13}C of the two odontocetes was similar and amounted to −17.3±0.4‰ for sperm whales and −17.8±0.3‰ for pilot whales; whilst fin whales were more depleted (−18.7±0.4‰). This indicates a partial overlap in toothed-whales feeding habitats, while confirms the differences in feeding behaviour of the mysticete. Pilot whales presented higher concentrations than sperm whales for ΣPCBs (38,666±25,731 ng g{sup −1} lw and 22,849±15,566 ng g{sup −1} lw respectively), ΣPBDEs (712±412 ng g{sup −1} lw and 347±173 ng g{sup −1} lw respectively) and ΣDDTs (46,081±37,506 ng g{sup −1} lw and 37,647±38,518 ng g{sup −1} lw respectively). Fin whales presented the lowest values, in accordance with its trophic position (ΣPCBs: 5721±5180 ng g{sup −1} lw, ΣPBDEs: 177±208 ng g{sup −1} lw and ΣDDTs: 6643±5549 ng g{sup −1} lw). Each species was characterized by large inter-individual variations that are more related to sex than trophic level, with males presenting higher contaminant burden than females. The discriminant analysis (DA) confirmed how DDTs and highly chlorinated PCBs were influential in differentiating the three species. Pollutant concentrations of our species were significantly higher than both their Southern Hemisphere and North Atlantic counterparts, possibly due to the particular Mediterranean geomorphology, which influences pollutants distribution and recycle. Dioxin-like PCBs accounted for over 80% of the total TEQ. This study demonstrated (1) an important exposure to pollutants of Mediterranean cetaceans, often surpassing the estimated threshold toxicity value of 17,000 ng g{sup −1} lw for blubber in marine mammals; and (2) how the final pollutant burden in these animals is strongly influenced not only by the trophic position but also by numerous other factors such as sex, age, body size and geographical distribution. - Highlights: • We analysed POPs concentrations in cetaceans from North-western Mediterranean Sea. • We integrated δ{sup 13}C and δ{sup 15}N values to combine trophic position and contamination. • Odontocetes show PCBs level higher than the toxicity threshold of 17 μg g{sup −1} lw. • Trophic position, sex, body size and distribution affect interspecies diversity.

54 ENVIRONMENTAL SCIENCES↗
NASA NTRS2007

Contrasts Between Precipitation over Mediterranean Sea and Adjacent Continental Areas Based on Decadal Scale Satellite Estimates

Most knowledge concerning the last century's climatology and climate dynamics of precipitation over the Mediterranean Sea basin is based on observations taken from rain gauges surrounding the sea itself. In turn, most of the observations come from Southern Europe, with many fewer measurements taken from widely scattered sites situated over North Africa, the Middle East, and the Balkans. This aspect of research on the Mediterranean Sea basin is apparent in a recent compilation of studies presented in book form concerning climate variability of the Mediterranean region [Lionello, P., P. Malanotte-Rizzoli, and R. Boscolo (eds.), 2006: Mediterranean Climate Variability. Elsevier, Amsterdam, 9 chapters.] In light of this missing link to over-water observations, this study (in conjunction with four companion studies by Z. Haddad, A. Mugnai, T. Nakazawa, and G. Stephens) will contrast the nature of precipitation variability directly over the Mediterranean Sea to precipitation variability over the surrounding land areas based on three decades of satellite-based precipitation estimates which have stood up well to validation scrutiny. The satellite observations are drawn from the Global Precipitation Climatology Project (GPCP) dataset extending back to 1979 and the TRMM Merged Algorithm 3b42 dataset extending back to 1998. Both datasets are mostly produced from microwave measurements, excepting the period from 1979 to mid-1987 when only infrared satellite measurements were available for the GPCP estimates. The purpose of this study is to emphasize how the salient properties of precipitation variability over land and sea across a hierarchy of space and time scales, and the salient differences in these properties, might be used in guiding short-term climate models to better predictions of future climate states under different regional temperature-change scenarios.

Smith, Eric A.↗
NASA NTRS2015

Characterization of Aerosol Episodes in the Greater Mediterranean Sea Area from Satellite Observations (2000-2007)

An algorithm able to identify and characterize episodes of different aerosol types above sea surfaces of the greater Mediterranean basin (GMB), including the Black Sea and the Atlantic Ocean off the coasts of Iberia and northwest Africa, is presented in this study. Based on this algorithm, five types of intense (strong and extreme) aerosol episodes in the GMB are identified and characterized using daily aerosol optical properties from satellite measurements, namely MODIS-Terra, Earth Probe (EP)-TOMS and OMIAura. These aerosol episodes are: (i) biomass-burning/urban-industrial (BU), (ii) desert dust (DD), (iii) dust/sea-salt (DSS), (iv) mixed (MX) and (v) undetermined (UN). The identification and characterization is made with our algorithm using a variety of aerosol properties, namely aerosol optical depth (AOD), Angstrom exponent (a), fine fraction (FF), effective radius (reff) and Aerosol Index (AI). During the study period (2000e2007), the most frequent aerosol episodes are DD, observed primarily in the western and central Mediterranean Sea, and off the northern African coasts, 7 times/year for strong episodes and 4 times/year for extreme ones, on average. The DD episodes yield 40% of all types of strong aerosol episodes in the study region, while they account for 71.5% of all extreme episodes. The frequency of occurrence of strong episodes exhibits specific geographical patterns, for example the BU are mostly observed along the coasts of southern Europe and off the Atlantic coasts of Portugal, the MX episodes off the Spanish Mediterranean coast and over the Adriatic and northern Aegean Sea, while the DSS ones over the western and central Mediterranean Sea. On the other hand, the extreme episodes for all but DD aerosol display more patchy spatial patterns. The strong episodes exhibit AOD at 550 nm as high as 1.6 in the southernmost parts of central and eastern Mediterranean Sea, which rise up to 5 for the extreme, mainly DD and DSS, episodes. Although more than 90% of all aerosol episodes last 1 day, there are few cases, mainly extreme DD episodes, which last up to 4 days. Independently of their type, the Mediterranean aerosol episodes occur more frequently in spring (strong and extreme episodes) and summer (strong episodes) and most rarely during winter. A significant year by year variability of Mediterranean aerosol episodes has been identified, more in terms of their frequency than intensity. An analysis of 5-day back trajectories for the most extreme episodes provides confidence on the obtained results of the algorithm, based on the revealed origin and track of air masses causing the episodes. The 25 and 6% of all strong and extreme episodes, respectively, are MX, thus highlighting the co-existence of different aerosol types in the greater Mediterranean. The intensity of both MX and DSS episodes exhibits similar patterns to those of DD strong ones, indicating that desert dust is a determinant factor for the intensity of aerosol episodes in the Mediterranean, including DSS and MX episodes.

Atmospheric Chemistry↗
DOE OSTI2022

Exceptionally stable preindustrial sea level inferred from the western Mediterranean Sea

An accurate record of preindustrial (pre-1900 CE) sea level is necessary to contextualize modern global mean sea level (GMSL) rise with respect to natural variability. Precisely dated phreatic overgrowths on speleothems (POS) provide detailed rates of Late Holocene sea-level rise in Mallorca. Statistical analysis indicates that sea level rose locally by 0.12 to 0.31 m (95% confidence) from 3.26 to 2.84 thousand years (ka) ago (2σ) and remained within 0.08 m (95% confidence) of preindustrial levels from 2.84 ka to 1900 CE. This sea-level history is consistent with glacial isostatic adjustment models adopting relatively weak upper mantle viscosities of ~10 20 Pa s. There is virtual certainty (>0.999 probability) that the average GMSL rise since 1900 CE has exceeded even the high average rate of sea-level rise between 3.26 and 2.84 ka inferred from the POS record. We conclude that modern GMSL rise is anomalous relative to any natural variability in ice volumes over the past 4000 years.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2018

Historical separation and present-day structure of common dolphinfish (Coryphaena hippurus) populations in the Atlantic Ocean and Mediterranean Sea

Abstract The common dolphinfish (Coryphaena hippurus) is an epipelagic, mid-trophic level, highly migratory species distributed throughout the world’s tropical and subtropical oceans in waters greater than 20°C. Life-history variables, migratory behaviour, and genetic markers have been used to define major stocks in the central Atlantic Ocean and Mediterranean Sea. Here, we used the mitochondrial DNA gene NADH subunit 1 (688 bp) to test for differences between population groups. A total of 103 haplotypes were detected among 203 fish. Gene diversities in samples were large and similar among populations (mean h = 0.932; range 0.894–0.987), but nucleotide diversities varied widely among samples (range π = 0.004–0.034) and appear to reflect population histories. Principal component analysis revealed two large populations groups, and the analysis of molecular variation and pairwise values of ΦST resolved population structure within these groups. Populations in the eastern Atlantic and Mediterranean showed the largest amounts of divergence from one another (ΦCT = 0.331). Adult movement and biophysical barriers to larval dispersal may explain contemporary differences between stocks, but the divergent populations in the Mediterranean Sea are likely due to isolations by cold temperature barriers during Pleistocene glaciations. The geographically large stock groupings require international cooperation in the harvest management and conservation of local dolphinfish populations.

Maggio, Teresa↗
NASA NTRS1988

Satellite detection of transient enhanced primary production in the western Mediterranean Sea

Extensive ship sampling of chlorophyll a and primary production of CO2 in the western Mediterranean Sea was conducted contemporaneous with Nimbus-7 coastal zone color scanner imagery. This approach resulted in an empirical model for estimating integrated water-column primary production from satellite imagery. Precision was adequate to resolve short-term fluctuations in primary production associated with a mesoscale circulation feature.

Lohrenz, Steven E.↗
NASA NTRS2022

Impact of Assimilating Adaptively Thinned AIRS Cloud-Cleared Radiances on the Analysis of Polar Lows and Mediterranean Sea Tropical-Like Cyclone in a Global Modeling and Data Assimilation Framework

Polar lows, and mesoscale convective cyclones bearing resemblance to tropical cyclones but originating outside of the tropics, are storms that are challenging to represent accurately in global analyses and models because of their small size, rapid growth at subsynoptic scales, occurrence in data poor oceanic regions, and difficulties in objectively validating them in analysis. Building on previous positive results obtained with respect to the representation of tropical cyclones (TCs) in a global model, a set of observing system experiments (OSEs) performed using the NASA Goddard Earth Observing System (GEOS, version 5) are investigated, focusing on three case studies—a polar low in the Sea of Okhotsk, a polar low in the Southern Ocean, and a Mediterranean Sea tropical-like cyclone that occurred during the boreal fall season of 2014. Experiments assimilating adaptively thinned cloud-cleared hyperspectral infrared radiances from the Atmospheric Infrared Sounder (AIRS) instrument on board the NASA Aqua satellite, with higher density in the vicinity of each storm and its pre-cyclogenesis environment, and lower density elsewhere, demonstrate a positive impact on the analyzed representation of each storm. The adaptive thinning experiments improve the storm intensity and structure, including vertical alignment, depth, symmetry, strength, and compactness of warm core compared to the reference experiments. The results suggest that jet-level processes associated with extremely strong horizontal velocity gradients as represented in the model analysis can be useful to locate dynamically active regions of the extratropical atmosphere where denser data coverage is likely to improve the analyzed representation of polar lows and other similar marine mesoscale convective cyclones.

global modeling↗
DOE OSTI2018

Enrichment of Bacteria From Eastern Mediterranean Sea Involved in Lignin Degradation via the Phenylacetyl-CoA Pathway

The degradation of allochthonous terrestrial organic matter, such as recalcitrant lignin and hemicellulose from plants, occurs in the ocean. We hypothesize that bacteria instead of white-rot fungi, the model organisms of aerobic lignin degradation within terrestrial environments, are responsible for lignin degradation in the ocean due to the ocean’s oligotrophy and hypersalinity. Warm oxic seawater from the Eastern Mediterranean Sea was enriched on lignin in laboratory microcosms. Lignin mineralization rates by the lignin-adapted consortia improved after two sequential incubations. Shotgun metagenomic sequencing detected a higher abundance of aromatic compound degradation genes in response to lignin, particularly phenylacetyl-CoA, which may be an effective strategy for marine microbes in fluctuating oxygen concentrations. 16S rRNA gene amplicon sequencing detected a higher abundance of Gammaproteobacteria and Alphaproteobacteria bacteria such as taxonomic families Idiomarinaceae, Alcanivoraceae , and Alteromonadaceae in response to lignin. Meanwhile, fungal Ascomycetes and Basidiomycetes remained at very low abundance. Our findings demonstrate the significant potential of bacteria and microbes utilizing the phenylacetyl-CoA pathway to contribute to lignin degradation in the Eastern Mediterranean where environmental conditions are unfavorable for fungi. Exploring the diversity of bacterial lignin degraders may provide important enzymes for lignin conversion in industry. Enzymes may be key in breaking down high molecular weight lignin and enabling industry to use it as a low-cost and sustainable feedstock for biofuels or other higher-value products.

09 BIOMASS FUELS↗
DOE OSTI2015

Ostreopsis cf. ovata dynamics in the NW Mediterranean Sea in relation to biotic and abiotic factors

An expansion of the distribution of Ostreopsis cf. ovata, a dinoflagellate which produces palytoxin-like compounds, has been reported in recent years. Economical and social interests are affected by blooms, as they are responsible for respiratory and skin problems in humans and may cause damage to marine organisms. In order to identify the most influential environmental factors that trigger proliferations of O. cf. ovata in the area of the adjacent shallow rocky coast of the Ebro Delta (NW Mediterranean Sea) a three-year survey was performed on the metaphytic microalgae community growing on the macrophytes Jania rubens and Corallina elongata. Small-size diatoms were more abundant than dinoflagellates; O. cf. ovata was identified as the only species present from the genus. Seawater temperature was the primary driver defining the ecological niche of O. cf. ovata. Freshwater and groundwater fluxes were more pronounced in southern than in northern sites, which may have resulted in a distinct O. cf. ovata spatial distribution, with the highest records of abundance and more frequent blooms in the north. In consequence, negative correlations between the abundance of O. cf. ovata and nitrate concentrations and significant positive correlation with salinity were observed. The temporal pattern of O. cf. ovata dynamics from mid-July to early-November is probably due to the fact that this species is observed only above a certain threshold temperature of seawater. Metaphytic cells of O. cf. ovata were smaller in the northern site than in the south, possibly as a result of an increase in cell division, coinciding with higher abundance, and this could be an indicator of favorable conditions. Toxicity in planktonic cells was negatively correlated with cell abundance in the water column, achieving maximum concentrations of 25 pg. PLTX eq cell{sup −1}. - Highlights: • Presence of a single Ostreopsis genotype in confirmed through qPCR. • Temperature confirmed as the most important parameter affecting its distribution. • Salinity positively correlated with Ostreopsis cf. ovata abundance. • Ostreopsis cf. ovata has a restricted ecological niche. • Toxicity in Ostreopsis planktonic cells negatively correlated with cell abundance.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2019

A Bayesian statistical approach to inferring particle dynamics from in-situ pump POC and chloropigment data from the Mediterranean Sea

Concentrations of chloropigments and particulate organic carbon (POC) in large-volume in-situ pump samples from the Mediterranean Sea were used to estimate rate constants of processes that control the fate of particles, and specifically chloropigments, in the water column. In this paper we introduce a Bayesian statistical inversion method that combines the data with a new box model and has the capacity to infer rate constants for POC respiration/dissolution, chlorophyll and pheopigment degradation, and particle aggregation and disaggregation. We use first-order kinetics to model disaggregation, and use both first-order and second-order kinetics to model aggregation. Using these methods, the estimated small-particle (1–70 μm) POC respiration rate constant was 2.44 -1.00 +1.69 yr -1 (0.41 yr). The estimated disaggregation and second-order aggregation rate constants were 85.6 -36.4 +63.4 yr -1 (1.17×10 -2 yr) and 2.78 -1.17 +2.01 μM -1 yr -1 , respectively. Using the optimal rate constants and the corresponding particle concentrations, disaggregation is ~4.2 times faster than the small-size POC dissolution rate, which indicates that disaggregation is a dominant processes at the time of sampling. More importantly, by comparing our results with those of previous studies, we conclude that sampling methods have less influence than tracers themselves on inferring particle dynamic rate constants. We previously introduced a somewhat similar approach to modeling SV sediment trap data, but large volume pumps are a much more common sample collection method in oceanographic surveys than SV sediment traps, and thus our new model should have a wider applicability.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
NASA NTRS2006

Atlantic to Mediterranean Sea Level Difference Driven by Winds near Gibraltar Strait

Observations and numerical simulations show that winds near Gibraltar Strait cause an Atlantic Ocean to Mediterranean Sea sea level difference of 20 cm peak to peak with a 3-cm standard deviation for periods of days to years. Theoretical arguments and numerical experiments establish that this wind-driven sea level difference is caused in part by storm surges due to alongshore winds near the North African coastline on the Atlantic side of Gibraltar. The fraction of the Moroccan coastal current offshore of the 284-m isobath is deflected across Gibraltar Strait, west of Camarinal Sill, resulting in a geostrophic surface pressure gradient that contributes to a sea level difference at the stationary limit. The sea level difference is also caused in part by the along-strait wind setup, with a contribution proportional to the along-strait wind stress and to the length of Gibraltar Strait and adjoining regions and inversely proportional to its depth.

atmospheric pressure fluctuations↗
NASA NTRS2019

Climatology of Transient Luminous Events and Lightning Observed Above Europe and the Mediterranean Sea

In 1999, the first sprites were observed above European thunderstorms using sensitive cameras. Since then, Eurosprite campaigns have been conducted to observe sprites and other transient luminous events (TLEs), expanding into a network covering large parts of Europe and coastal areas. In 2009 through 2013, the number of optical observations of TLEs reached a peak of 2000 per year. Because of this unprecedented number of European observations, it was possible to construct a climatology of 8394 TLEs observed above 1018 thunderstorm systems and study for the first time their distribution and seasonal cycle above Europe and parts of the Mediterranean Sea. The number of TLEs per thunderstorm was found to follow a power law, with less than 10 TLEs for 801 thunderstorms and up to 195 TLEs above the most prolific one. The majority of TLEs were classified as sprites, 641 elves, 280 halos, 70 upward lightning, 2 blue jets and 1 gigantic jet. The climatology shows intense TLE activity during summer over continental areas and in late autumn over coastal areas and sea. The two seasons peak, respectively, in August and November, separated by March and April with almost no TLEs, and a relative minimum around September. The observed TLE activity, i.e. mostly sprites, is shown to be largely consistent with lightning activity, with a 1/1000 of observed TLE-to-lightning ratio in regions with most observations. The overall behaviour is consistent among individual years, making the observed seasonal cycle a robust general feature of TLE activity above Europe.

Arnone, Enrico↗