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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 19 records

Summit Darshan Archival Dataset

Summit Darshan Archival Dataset contains 2021 Summit Darshan log data for 25 applications and is grouped into science domains. The dataset is processed, and all the propriety fields are anonymized. The resultant data is converted into a tabular structure and saved in parquet file format. In this notebook, we demonstrate how to access the data. Data Organization: The data is organized into two directories: Darshan total (`darshan_total`): List all the high levels generated by the `darshan-parser --total` command on `.darshan` files. There is one parquet file for each application. Note: `uid` and `exe` field are masked Darshan detail (`darshan_detail`): This data contains detailed job level log information extracted by command `darshan-parser` on the raw `.darshan` files. The data is sorted by directory hierarchy in the order of `year/month/day (2021/12/07)`. For instance, to get the data for a `job_id` 3819766 of application `App11`, which was executed on `2021-12-07`can be accessed as follows. Note:`uid` and `filename` fields are masked

97 MATHEMATICS AND COMPUTING↗

Numerical investigations to identify environmental factors for field-scale reactive transport of pathogens at riverbank filtration sites

While induced bank filtration is a proven method for facilitating sustainable drinking water production, it is at risk from surface water contaminations (e.g., pathogens). Induced bank filtration and pathogen transport in groundwater have been studied extensively. However, long-term studies that consider real-world conditions are missing. These conditions include seasonal changes to environmental conditions and waterworks operations. Therefore, to analyze the effect of seasonal changes on the transport of human pathogenic viruses and their indicators in induced bank filtration, concentrations of adenoviruses and pathogen indicators were monitored over 16 months at an active bank filtration plant at the Rhine River, in Düsseldorf (Germany). Based on this data, a 2D groundwater model was created in PFLOTRAN that simulated flow, heat transport, conservative transport of chloride and the resulting electrical conductivity, reactive transport of oxygen and nitrate, and colloid-based transport of coliforms, somatic coliphages, and adenoviruses. The results show that reduced travel time was the key factor determining periods with a low removal of coliforms and somatic coliphages in the aquifer. Travel time was controlled by river level variations during rainy seasons, and the waterworks extraction rates during dry seasons. Further, for adenovirus transport, travel distance in the subsurface appeared to be the key factor, while travel time had no significant impact. Coliform removal increased when the colmation layer permeability decreased, while coliphage and adenovirus removal was unaffected by the colmation layer permeability. Seasonal changes in temperature and oxygen content did not significantly impact the removal of coliphages and adenoviruses in groundwater. Denitrifying conditions correlated with a lowered coliform removal, but the modelling could not establish a connection between denitrifying conditions and coliform removal. Our study showed that removal of pathogens and pathogen indicators at induced bank filtration plants varies greatly in time and space (e.g., for coliforms from 1 to 4 log-levels at 20m travel distance), and that adenovirus transport differs considerably from transport of coliforms and somatic coliphages.

59 BASIC BIOLOGICAL SCIENCES↗

TIME-SERIES PHOTOMETRY OF STARS IN AND AROUND THE LAGOON NEBULA. I. ROTATION PERIODS OF 290 LOW-MASS PRE-MAIN-SEQUENCE STARS IN NGC 6530

We have conducted a long-term, wide-field, high-cadence photometric monitoring survey of {approx}50,000 stars in the Lagoon Nebula H II region. This first paper presents rotation periods for 290 low-mass stars in NGC 6530, the young cluster illuminating the nebula, and for which we assemble a catalog of infrared and spectroscopic disk indicators, estimated masses and ages, and X-ray luminosities. The distribution of rotation periods we measure is broadly uniform for 0.5 days < P < 10 days; the short-period cutoff corresponds to breakup. We observe no obvious bimodality in the period distribution, but we do find that stars with disk signatures rotate more slowly on average. The stars' X-ray luminosities are roughly flat with rotation period, at the saturation level (log L{sub X} /L{sub bol} Almost-Equal-To -3.3). However, we find a significant positive correlation between L{sub X} /L{sub bol} and corotation radius, suggesting that the observed X-ray luminosities are regulated by centrifugal stripping of the stellar coronae. The period-mass relationship in NGC 6530 is broadly similar to that of the Orion Nebula Cluster (ONC), but the slope of the relationship among the slowest rotators differs from that in the ONC and other young clusters. We show that the slope of the period-mass relationship for the slowest rotators can be used as a proxy for the age of a young cluster, and we argue that NGC 6530 may be slightly younger than the ONC, making it a particularly important touchstone for models of angular momentum evolution in young, low-mass stars.

79 ASTRONOMY AND ASTROPHYSICS↗

Infrared weak corrections to strongly interacting gauge boson scattering

We evaluate the impact of electroweak corrections of infrared origin on strongly interacting longitudinal gauge boson scattering, calculating all-order resummed expressions at the double log level. As a working example, we consider the standard model with a heavy Higgs. At energies typical of forthcoming experiments (LHC, International Linear Collider, Compact Linear Collider), the corrections are in the 10%-40% range, with the relative sign depending on the initial state considered and on whether or not additional gauge boson emission is included. We conclude that the effect of radiative electroweak corrections should be included in the analysis of longitudinal gauge boson scattering.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Soft-Collinear Mode for Jet Rates in Soft-Collinear Effective Theory

We propose the addition of a new "soft-collinear" mode to soft collinear effective theory (SCET) below the usual soft scale to factorize and resum logarithms of jet radii R in jet cross sections. We consider exclusive 2-jet cross sections in e + e - collisions with an energy veto Λ on additional jets. The key observation is that there are actually two pairs of energy scales whose ratio is R: the transverse momentum QR of the energetic particles inside jets and their total energy Q, and the transverse momentum ΛR of soft particles that are cut out of the jet cones and their energy Λ. The soft-collinear mode is necessary to factorize and resum logarithms of the latter hierarchy. We show how this factorization occurs in the jet thrust cross section for cone and k T -type algorithms at O(α s ) and using the thrust cone algorithm at O(α$2\atop{s}$). We identify the presence of hard-collinear, in-jet soft, global (veto) soft, and soft-collinear modes in the jet thrust cross section. We also observe here that the in-jet soft modes measured with thrust are actually the "csoft" modes of the theory SCET + . We dub the new theory with both csoft and soft-collinear modes "SCET ++ ". We go on to explain the relation between the "unmeasured" jet function appearing in total exclusive jet cross sections and the hard-collinear and csoft functions in measured jet thrust cross sections. We do not resum logs that are non-global in origin, arising from the ratio of the scales of soft radiation whose thrust is measured at Q${{\tau}}$/R and of the soft-collinear radiation at 2ΛR. Their resummation would require the introduction of additional operators beyond those we consider here. The steps we outline here are a necessary part of summing logs of R that are global in nature and have not been factorized and resummed beyond leading-log level previously.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

How to secure your servers, code and data

Oral presentation in English, slides in English. Advice and best practices regarding the security of your servers, code and data will be presented. We will also describe how the Computer Security Team can help you reduce the risks.

CODE↗

iSSH v. Auditd: Intrusion Detection in High Performance Computing

The goal is to provide insight into intrusions in high performance computing, focusing on tracking intruders motions through the system. The current tools, such as pattern matching, do not provide sufficient tracking capabilities. We tested two tools: an instrumented version of SSH (iSSH) and Linux Auditing Framework (Auditd). First discussed is Instrumented Secure Shell (iSSH): a version of SSH developed at Lawrence Berkeley National Laboratory. The goal is to audit user activity within a computer system to increase security. Capabilities are: Keystroke logging, Records user names and authentication information, and Catching suspicious remote and local commands. Strengths for iSSH are: (1) Good for keystroke logging, making it easier to track malicious users by catching suspicious commands; (2) Works with Bro to send alerts; could be configured to send pages to systems administrators; and (3) Creates visibility into SSH sessions. Weaknesses are: (1) Relatively new, so not very well documented; and (2) No capabilities to see if files have been edited, moved, or copied within the system. Second we discuss Auditd, the user component of the Linux Auditing System. It creates logs of user behavior, and monitors systems calls and file accesses. Its goal is to improve system security by keeping track of users actions within the system. Strenghts of Auditd are: (1) Very thorough logs; (2) Wider variety of tracking abilities than iSSH; and (3) Older, so better documented. Weaknesses are: (1) Logs record everything, not just malicious behavior; (2) The size of the logs can lead to overflowing directories; and (3) This level of logging leads to a lot of false alarms. Auditd is better documented than iSSH, which would help administrators during set up and troubleshooting. iSSH has a cleaner notification system, but the logs are not as detailed as Auditd. From our performance testing: (1) File transfer speed using SCP is increased when using iSSH; and (2) Network benchmarks were roughly the same regardless of which tool was running.

99 GENERAL AND MISCELLANEOUS↗

Recurrent Neural Network Language Models for Open Vocabulary Event-Level Cyber Anomaly Detection

Automated analysis methods are crucial aids for monitoring and defending a network to protect the sensitive or confidential data it hosts. This work introduces a flexible, powerful, and unsupervised approach to detecting anomalous behavior in computer and network logs; one that largely eliminates domain-dependent feature engineering employed by existing methods. By treating system logs as threads of interleaved ``sentences'' (event log lines) to train online unsupervised neural network language models, our approach provides an adaptive model of normal network behavior. We compare the effectiveness of both standard and bidirectional recurrent neural network language models at detecting malicious activity within network log data. Extending these models, we introduce a tiered recurrent architecture, which provides context by modeling sequences of users' actions over time. Compared to isolation forests and Principal Components Analysis (PCA), two popular anomaly detection algorithms, we observe superior performance on the Los Alamos National Laboratory Cyber Security dataset. For log-line-level predictions, our best performing character-based model provides test set anomaly scores ranking red team events in the 98th percentile on average, and yields 0.97 area under the receiver operator characteristic curve, demonstrating the strong fine-grained anomaly detection performance of this approach on open vocabulary logging sources.

Cyber Analysis, Deep Learning, language analysis, ↗

The Hagedorn spectrum, nuclear level densities and first order phase transitions

An exponential mass spectrum, like the Hagedorn spectrum, with slope 1/T{sub H} was interpreted as fixing an upper limiting temperature T{sub H} that the system can achieve. However, thermodynamically, such spectrum indicates a 1{sup st} order phase transition at a fixed temperature T{sub H}. A much lower energy example is the log linear level nuclear density below the neutron binding energy that prevails throughout the nuclear chart. We show that, for non-magic nuclei, such linearity implies a 1{sup st} order phase transition from the pairing superfluid to an ideal gas of quasi particles.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Using Downhole Probes to Locate and Characterize Buried Transuranic and Mixed Low Level Waste

Borehole logging probes were developed and tested to locate and quantify transuranic elements in subsurface disposal areas and in contaminated sites at USDOE Weapons Complex sites. A new method of measuring very high levels of chlroine in the subsurface was developed using pulsed neutron technology from oilfield applications. The probes were demonstrated at the Hanford site in wells containing plutonium and other contaminants.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

A Zoom-in Analysis of I/O Logs to Detect Root Causes of I/O Performance Bottlenecks

Scientific applications frequently spend a large fraction of their execution time in reading and writing data on parallel file systems. Identifying these I/O performance bottlenecks and attributing root causes are critical steps toward devising optimization strategies. Several existing studies analyze I/O logs of a set of benchmarks or applications that were run with controlled behaviors. However, there is still a lack of general approach that systematically identifies I/O performance bottlenecks for applications running "in the wild" on production systems. In this study, we have developed an analysis approach of "zooming in" from platform-wide to application-wide to job-level I/O logs for identifying I/O bottlenecks in arbitrary scientific applications. We analyze the logs collected on a Cray XC40 system in production over a two-month period. This study results in several insights for application developers to use in optimizing I/O behavior.

Wang, Teng↗

X-RAY EMISSION FROM THE SUPER-EARTH HOST GJ 1214

Stellar activity can produce large amounts of high-energy radiation, which is absorbed by the planetary atmosphere leading to irradiation-driven mass loss. We present the detection and an investigation of high-energy emission in a transiting super-Earth host system, GJ 1214, based on XMM-Newton observations. We derive an X-ray luminosity of L{sub X} = 7.4 × 10{sup 25} erg s{sup –1} and a corresponding activity level of log (L{sub X} /L {sub bol}) ∼ –5.3. Further, we determine a coronal temperature of about ∼3.5 MK, which is typical for coronal emission of moderately active low-mass stars. We estimate that GJ 1214 b evaporates at a rate of 1.3× 10{sup 10} g s{sup –1} and has lost a total of ≈2-5.6 M {sub ⊕}.

79 ASTRONOMY AND ASTROPHYSICS↗

Listeria monocytogenes loss of cultivability on carrot is associated with the formation of mesosome-like structures

Raw carrot is known to have antimicrobial activity against Listeria monocytogenes, but the mechanism of action has not been fully elucidated. In this study, we examined carrot antilisterial activity against several strains of Listeria species (including L. grayi, L. innocua, L. seeligeri, and L. welshimeri) and L. monocytogenes. A representative strain of L. monocytogenes was subsequently used for further characterizing carrot antilisterial activity. Exposure to fresh-cut carrot for 15 min resulted in a similar loss of cultivability, ranging from 2.5 to 4.7 log units, across all Listeria strains evaluated. L. monocytogenes recovered from the fresh-cut surface of different raw carrots was 1.6 to 4.1 log lower than levels obtained from paired boiled carrot samples with abolished antilisterial activity. L. monocytogenes levels recovered from fresh-cut carrot were 2.8 to 3.1 log lower when enumerated by culture-dependent methods than by the culture-independent method of PMAxx-qPCR, a qPCR assay that is performed using DNA pre-treated to selectively sequester DNA from cells with injured membranes. These results suggested that L. monocytogenes loss of cultivability on fresh-cut carrot was not associated with a loss of L. monocytogenes cell membrane integrity and putative cell viability. Transmission electron microscopy imaging revealed that L. monocytogenes rapidly formed mesosome-like structures upon exposure to carrot fresh-cut surface but not upon exposure to boiled carrot surface, suggesting there may be an association between the formation of these mesosome-like structures and a loss of cultivability in L. monocytogenes. As a result, further research is necessary to conclude the causality of this association.

59 BASIC BIOLOGICAL SCIENCES↗

Completion Report for Well ER-20-12: Corrective Action Units 101 and 102: Central and Western Pahute Mesa

Well ER-20-12 was drilled for the U.S. Department of Energy, Nevada National Security Administration Nevada Field Office in support of the Underground Test Area Activity. The well was drilled from October 2015 to January 2016 as an addition to the Central and Western Pahute Mesa corrective action units 101 and 102 the Phase II drilling program. Well ER-20-12 was identified based on recommendations of the Pahute Mesa Guidance Team as a result of anomalous tritium detections in groundwater samples collected from Well PM-3 in 2011 and 2013. The primary purpose of the well was to provide information on the hydrogeology in the area downgradient of select underground tests on Western Pahute Mesa and define hydraulic properties in the saturated Tertiary volcanic rocks. The main 46.99-centimeter (cm) (18.5-inch [in.]) borehole was drilled to a depth of 765.14 meters (m) (2,510.3 ft) and the hole opened to 66.04 cm (26 in.); followed by the 50.80-cm (20-in.) surface casing, which was installed and sealed with cement; and a piezometer (p4) was set in the Timber Mountain welded-tuff aquifer (TMWTA) between the casing and the open borehole. The borehole was continued with a 46.99-cm (18.5-in.) drill bit to a depth of 1,326.53 m (4,352.16 ft), and an intermediate 24.44-cm (9.625-in.) casing was installed and sealed to 1,188.72 m (3,900.00 ft) A piezometer (p3) was installed across the Calico Hills zeolitic composite unit (CHZCM) (lava-flow aquifer [LFA]) in the annulus of the open borehole. Two additional piezometers were installed and completed between the intermediate casing and the borehole wall, one (p2) in the CHZCM and one (p1) in the Belted Range aquifer (BRA). The piezometers are set to monitor groundwater properties in the completed intervals. The borehole was continued with a 21.59-cm (8.5-in.) drill bit to a total depth of 1,384.80 m (4,543.33 ft), and the main completion 13.97-cm (5.5-in.) casing was installed in the open borehole across the Pre-Belted Range composite unit (PBRCM). Data collected during hole construction include composite drill cutting samples collected every 3.0 m (10 ft), geophysical logs, hydrophysical logs, percussion core samples, water-quality measurements (including tritium), and water-level measurements. The well penetrated 1,384.4 m (4,543.33 ft) of Tertiary volcanic rocks. The stratigraphy and lithology were generally as expected with one noted exception. A thick lava-flow and related ash-flow tuffs were identified as Calico Hills Formation (Th), and no Crater Flat units were noted. Additionally, many of the Thirsty Canyon and Timber Mountain units were thicker than expected. Fluid levels measured in the borehole during drilling are the following: (1) on November 2, 2015, Navarro measured the fluid level in the borehole at a depth of 492.33 m (1,615.25 ft) below ground surface (bgs); (2) Schlumberger and COLOG recorded fluid levels during geophysical logging on November 4 and 5, 2015, at a depth of 492.86 m (1,617 ft) and 492.25 m (1,615 ft) bgs, respectively; and (3) on December 4, 2015, COLOG and Navarro measured fluid level in the 20-in. casing with an open borehole to 1,326.54 m (4,352.16 ft) bgs at 575.77 m (1,889.00 ft) and 574.03 m (1,883.3 ft) bgs, respectively. These and subsequent water-level measurements indicate a potential head difference of greater than 76.2 m (250 ft) for groundwater in aquifers above and below the Upper Paintbrush confining unit (UPCU). As expected, tritium was occasionally measured above the Safe Drinking Water Act limit (20,000 picocuries per liter [pCi/L]). Lab analysis on four bailed samples and taken from the undeveloped well indicate that the tritium activities average approximately 36,545 pCi/L. All Fluid Management Plan (FMP) requirements for Well ER-20-12 were met. Analysis of monitoring samples and FMP confirmatory samples indicate that fluids generated during drilling at ER-20-12 met the FMP criteria for discharge to the lined sump and designated infiltration area. All sanitary and hydrocarbon waste generated was properly handled and disposed of.

54 ENVIRONMENTAL SCIENCES↗

Expediting Groundwater Sampling at Hanford and Making It Safer - 13158

The CH2M HILL Plateau Remediation Company (CHPRC) manages the groundwater monitoring programs at the Department of Energy's 586-square-mile Hanford site in southeastern Washington state. These programs are regulated by the Resource Conservation and Recovery Act (RCRA), the Comprehensive Environmental Response Compensation and Liability Act (CERCLA), and the Atomic Energy Act (AEA). The purpose of monitoring is to track existing groundwater contamination from past practices, as well as other potential contamination that might originate from RCRA treatment, storage, and disposal (TSD) facilities. An integral part of the groundwater-monitoring program involves taking samples of the groundwater and measuring the water levels in wells scattered across the site. Each year, more than 1,500 wells are accessed for a variety of reasons. Historically, the monitoring activities have been very 'people intensive'. Field personnel or 'samplers' have been issued pre-printed forms showing information about the well(s) for a particular sampling evolution. This information is taken from two official electronic databases: the Hanford Well Information System (HWIS) and the Hanford Environmental Information System (HEIS). The samplers traditionally used these hardcopy forms to document the groundwater samples and well water-levels. After recording the entries in the field, the samplers turned the forms in at the end of the day and other personnel posted the collected information. In Automating Groundwater Sampling at Hanford (HNF-38542-FP Revision 0, Presented at Waste Management 2009 Conference, March 1 - March 5, 2009, Phoenix, AZ), we described the methods, tools, and techniques that would be used in automating the activities associated with measuring water levels. The Field Logging and Electronic Data Gathering (FLEDG) application/database that automates collecting the water-level measurement data has now been implemented at Hanford. In addition to eliminating the need to print out documents, the system saves three-to-four man days each month for the field personnel taking the measurements and the scientists and administrators managing the data and the documentation. After the information has received technical review, FLEDG automatically updates the database for water-level measurements and loads the document management system with the completed sampling report. Due to safety considerations, access to wells is conditional. A spreadsheet with appropriate data not only lists the wells that are cleared for work, but also the safety personnel who must be present before work can start. This spreadsheet is used in planning daily activities. Daily plans are structured to ensure that the wells to be sampled are cleared for work and the appropriate safety personnel have been assigned and are present before the work starts. Historically, the spreadsheets have been prepared manually, and as a result, are potentially subject to human error. However, a companion database application has been developed to work with FLEDG - making the entire sampling process more efficient and safer for personnel. The Well Access List - Electronic, WAL-E, is a database that contains much the same information that was previously manually loaded into the spread sheet. In addition, WAL-E contains a managed work-flow application that shows the access requirements and allows for appropriate reviews of the compiled well. Various CHPRC organizations, including Industrial Hygiene, RADCON, and Well Maintenance and Sample Administration are able to enter and review the wells added or deleted from the WAL-E database. The FLEDG system then accesses this database information to identify appropriate support personnel and provide safety requirements to field personnel. In addition, WAL-E offers the assurance that wells have appropriate locks and are correctly labeled and electrically grounded as required, before well activities begin. This feature is an extremely important aspect of the FLEDG/WAL-E system because it adds another safety check to the work evolution and reduces the potential for unsafe conditions to exist that would lead to a stop-work situation. This paper will further describe the technical aspects of both electronic programs/databases and their successful application at Hanford. (authors)

54 ENVIRONMENTAL SCIENCES↗

WE-E-17A-05: Complementary Prognostic Value of CT and 18F-FDG PET Non-Small Cell Lung Cancer Tumor Heterogeneity Features Quantified Through Texture Analysis

Purpose: Previous studies have shown that CT or 18F-FDG PET intratumor heterogeneity features computed using texture analysis may have prognostic value in Non-Small Cell Lung Cancer (NSCLC), but have been mostly investigated separately. The purpose of this study was to evaluate the potential added value with respect to prognosis regarding the combination of non-enhanced CT and 18F-FDG PET heterogeneity textural features on primary NSCLC tumors. Methods: One hundred patients with non-metastatic NSCLC (stage I–III), treated with surgery and/or (chemo)radiotherapy, that underwent staging 18F-FDG PET/CT images, were retrospectively included. Morphological tumor volumes were semi-automatically delineated on non-enhanced CT using 3D SlicerTM. Metabolically active tumor volumes (MATV) were automatically delineated on PET using the Fuzzy Locally Adaptive Bayesian (FLAB) method. Intratumoral tissue density and FDG uptake heterogeneities were quantified using texture parameters calculated from co-occurrence, difference, and run-length matrices. In addition to these textural features, first order histogram-derived metrics were computed on the whole morphological CT tumor volume, as well as on sub-volumes corresponding to fine, medium or coarse textures determined through various levels of LoG-filtering. Association with survival regarding all extracted features was assessed using Cox regression for both univariate and multivariate analysis. Results: Several PET and CT heterogeneity features were prognostic factors of overall survival in the univariate analysis. CT histogram-derived kurtosis and uniformity, as well as Low Grey-level High Run Emphasis (LGHRE), and PET local entropy were independent prognostic factors. Combined with stage and MATV, they led to a powerful prognostic model (p<0.0001), with median survival of 49 vs. 12.6 months and a hazard ratio of 3.5. Conclusion: Intratumoral heterogeneity quantified through textural features extracted from both CT and FDG PET images have complementary and independent prognostic value in NSCLC.

60 APPLIED LIFE SCIENCES↗

Spatio-Temporal Analysis of HPC I/O and Connection Data

The HPC system consists of a set of layers of software and hardware for I/O and networking. System logs are helpful resources to understand what is going on in the system. A challenge is that it is non-trivial to analyze the logs maintained in various levels of the stack. Independent analysis might lead to an incomplete conclusion due to the limited coverage of each log. This work takes a comprehensive approach to analysis that incorporates the logs in the multiple layers and components, in order to facilitate the detection of anomalous activities. This research aims to identify and predict potential performance bottlenecks in the HPC system, by capturing the temporal variation patterns from heterogeneous, high-dimensional, and non-linear log data. In this paper, we share our preliminary efforts for spatio-temporal analysis of HPC I/O and connection data, with our initial observations from the analysis of one-week HPC log data sets collected from one of NERSC systems.

Choi, Jinhwan↗

Growth, mortality, wood density, biomass data from BIONTE inventories in Manaus, Brazil

BIONTE (BIOmass and NuTrient Experiment) is a selective logging experiment established at the Experimental Station of Tropical Forestry (EEST, aka “ZF2”) field research station in the mid 1980s in the central Amazon (Higuchi et al. 1997, Amaral et al. 2019). Led by the National Institute for Amazon Research (INPA) in Brazil, the project aimed at assessing the effects of logging intensity on forest dynamics and enabling the creation of a model of forest management for the Central Amazon. The experiment included three levels of increasing selective logging intensity and controls, with 1 hectare sample plots (12 total) located at the center of 4 hectare treatment plots. The site’s Köppen classification is tropical rainforest (Af), characterized by high temperatures and humidity, with mean annual temperatures around 27 ℃ and mean annual precipitation around 2200 mm of rain. The vegetation has a high floristic diversity, the soils of the region are poor in nutrients, and the topography is characterized by plateaus (where BIONTE is located), and also valley bottoms and slopes. The inventory (growth and mortality) and biomass data included here covers the 1990 to 2019 period, with wood density being averaged from existing datasets. This dataset includes a data file in .csv file format and a .txt file, BIONTE_mortality-rates_headers.txt, that provides descriptions for the data file headers.

54 ENVIRONMENTAL SCIENCES↗