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Results for “Generalized additive models”

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NASA NTRS2011

Hyperspectral Mapping of the Invasive Species Pepperweed and the Development of a Habitat Suitability Model

Mapping and predicting the spatial distribution of invasive plant species is central to habitat management, however difficult to implement at landscape and regional scales. Remote sensing techniques can reduce the impact field campaigns have on these ecologically sensitive areas and can provide a regional and multi-temporal view of invasive species spread. Invasive perennial pepperweed (Lepidium latifolium) is now widespread in fragmented estuaries of the South San Francisco Bay, and is shown to degrade native vegetation in estuaries and adjacent habitats, thereby reducing forage and shelter for wildlife. The purpose of this study is to map the present distribution of pepperweed in estuarine areas of the South San Francisco Bay Salt Pond Restoration Project (Alviso, CA), and create a habitat suitability model to predict future spread. Pepperweed reflectance data were collected in-situ with a GER 1500 spectroradiometer along with 88 corresponding pepperweed presence and absence points used for building the statistical models. The spectral angle mapper (SAM) classification algorithm was used to distinguish the reflectance spectrum of pepperweed and map its distribution using an image from EO-1 Hyperion. To map pepperweed, we performed a supervised classification on an ASTER image with a resulting classification accuracy of 71.8%. We generated a weighted overlay analysis model within a geographic information system (GIS) framework to predict areas in the study site most susceptible to pepperweed colonization. Variables for the model included propensity for disturbance, status of pond restoration, proximity to water channels, and terrain curvature. A Generalized Additive Model (GAM) was also used to generate a probability map and investigate the statistical probability that each variable contributed to predict pepperweed spread. Results from the GAM revealed distance to channels, distance to ponds and curvature were statistically significant (p < 0.01) in determining the locations of suitable pepperweed habitats.

Pepperweed↗

NASA NTRSDate not supplied

TPSAS-NF1676L-13204-DND

Invasive perennial pepperweed (Lepidium latifolium) has spread rapidly throughout the western United States in the past fifteen years. Pepperweed outcompetes many native species for water and nutrients, disturbing sensitive ecosystems. The purpose of this study is to map the contemporary distribution of pepperweed throughout the wetland ecosystem of the restored South San Francisco Bay Salt Ponds and create a habitat suitability model to predict future spread. Pepperweed reflectance data were collected in-situ with the GER 1500 spectroradiometer along with presence and absence pepperweed GPS data points. A Spectral Angle Mapper (SAM) classification algorithm (Method A) was used to distinguish pepperweed spectra and map its distribution on an EO-1 Hyperion image of the study area. Similarly, a supervised classification was run on an ASTER image of the study area. A GIS multivariate habitat suitability model was created to predict areas most susceptible to pepperweed colonization. Variables incorporated into the model were tidal extent, propensity for disturbance, pond salinity, proximity to levees and channels, and terrain curvature. A Generalized Additive Model (GAM) was also used to generate a suitability map (Method B) and investigate the statistical probability that each variable contributed to predict pepperweed spread. Results from the GAM revealed distance to channels, distance to disturbance factors, extreme pond salinity and curvature as statistically significant in determining the locations of suitable pepperweed habitats

Andrew Nguyen↗

NASA NTRS2020

Chrono-Validation of Near-Real-Time Landslide Susceptibility Models via Plugin Statistical Simulations

The idea behind any validation scheme in landslide susceptibility studies is to test whether a model calibrated on a certain data can predict an unknown dataset of the same nature (landslide presences/absences and covariates). Almost the entirety of landslide susceptibility studies are validated by subsetting a single dataset into a training and test sets. This dataset usually corresponds either to event-specific or to historical inventories. Very rarely, a multi-temporal inventory is available and, in the few cases where this condition is met, the validation practices involve training a model on a specific landslide inventory, deriving a single predictive equation and validating it on a subsequent landslide inventory. This commonly leads landslide predictive studies, even those with a strong statistical rigor, to neglect the uncertainty estimation in their modeling scheme. In statistics, validation can also be performed via statistical simulations. This means that after fitting a given model, one can generate any number of predictive functions and test their predictive skills on any type and number of unknown datasets. In this work, we take a similar direction and we apply it to model and validate three separate co-seismic inventories, including an uncertainty estimation phase. We mapped these inventories within the same area in Indonesia, for three earthquakes occurred in 2012, 2017 and 2018. Specifically, we build three event-specific Bayesian Generalize Additive Models of the binomial family. From each model we then simulate 1000 predictive realizations over the remaining two inventories, by using a plug-in scheme where all the morphometric covariates are kept fixed and only the ground motion is replaced according to the prediction target. By doing so, we introduce a new analytical tool for near-real-time landslide predictive purposes, which is able to produce a probabilistic model which stands in between the definitions of susceptibility and hazard. In fact, our model is able to accurately estimate “where” and “when” - although not “how frequently” - landslide have occurred by featuring the multitemporal information of the trigger. In our findings, the simulations are quite similar to the fitted models; and the nine combinations we analyse produce excellent performance. This result confirms the assumption that “the past is the key to the future”, as we show that the relative contribution of each variable and their interactions in each probabilistic model remains practically the same across temporal replicates. This information is not trivial because it supports the routines implemented in global near-real-time applications.

Temporal validation↗

NASA NTRS2018

Polarization Decomposition and Temperature Bias Resolution for SMAP Passive Soil Moisture Retrieval Using Time Series Brightness Temperature Observations

In passive microwave remote sensing of soil moisture, the tau-omega (τ-ω) model has often been used to provide soil moisture estimates at a spatial scale representative of the satellite footprint dimensions. For modeling simplicity, model parameters such as the single scattering albedo (ω) and vegetation opacity (τ) that go into the geophysical inversion process are often assumed to be independent of polarizations. Although this absence of polarization dependence can often be justified in special cases as in low-frequency remote sensing or under dense vegetation conditions, it is not a robust assumption in general. Additional model parameterization errors arising from this assumption are possible, leading to degradation in soil moisture estimation accuracy. In this paper, we propose a time series approach to try to resolve the polarization dependence of several τ-ω model parameters as well as the temperature bias arising from the ancillary temperature data. The Version 4 of the Soil Moisture Active Passive (SMAP) Level 1B brightness temperature time series observations were used to illustrate the mechanics of this approach, with an emphasis on a comparison between resulting satellite soil moisture retrievals and in situ data collected at several core validation sites. It was found that this time series approach resulted in significant reduction of the dry bias exhibited in the current SMAP passive soil moisture data products, while retaining the same performance in other metrics of the current baseline passive soil moisture retrieval algorithm.

time series↗

NASA NTRS2016

Weather and Climate Change Impacts on Human Mortality in Bangladesh

Weather and climate profoundly affect human health. Several studies have demonstrated a U-, V-, or J-shaped temperature-mortality relationship with increasing death rates at the lower and particularly upper end of the temperature distribution. The objectives of this study were (1) to analyze the relationship between temperature and mortality in Bangladesh for different subpopulations and (2) to project future heat-related mortality under climate change scenarios. We used (non-)parametric Generalized Additive Models adjusted for trend, season and day of the month to analyze the effect of temperature on daily mortality. We found a decrease in mortality with increasing temperature over a wide range of values; between the 90th and 95th percentile an abrupt increase in mortality was observed which was particularly pronounced for the elderly above the age of 65 years, for males, as well as in urban areas and in areas with a high socio-economic status. Daily historical and future temperature values were obtained from the NASA Earth Exchange Global Daily Downscaled Projections (NEX-GDDP) dataset. This dataset is comprised of downscaled climate scenarios for the globe that are derived from the General Circulation Model (GCM) runs conducted under the Coupled Model Intercomparison Project Phase 5 (CMIP5). The derived dose-response functions were used to estimate the number of heat-related deaths occurring during the 1990s (1980-2005), the 2020s (2011-2040) and the 2050s (2041-2070). We estimated that excess deaths due to heat will triple from the 1990s to the 2050s, with an annual number of 0.5 million excess deaths in 1990 to and expected number of 1.5 millions in 2050.

mortality↗

NASA NTRS2004

A Method for Incorporating Changing Structural Characteristics Due to Propellant Mass Usage in a Launch Vehicle Ascent Simulation

Launch vehicles consume large quantities of propellant quickly, causing the mass properties and structural dynamics of the vehicle to change dramatically. Currently, structural load assessments account for this change with a large collection of structural models representing various propellant fill levels. This creates a large database of models complicating the delivery of reduced models and requiring extensive work for model changes. Presented here is a method to account for these mass changes in a more efficient manner. The method allows for the subtraction of propellant mass as the propellant is used in the simulation. This subtraction is done in the modal domain of the vehicle generalized model. Additional computation required is primarily for constructing the used propellant mass matrix from an initial propellant model and further matrix multiplications and subtractions. An additional eigenvalue solution is required to uncouple the new equations of motion; however, this is a much simplier calculation starting from a system that is already substantially uncoupled. The method was successfully tested in a simulation of Saturn V loads. Results from the method are compared to results from separate structural models for several propellant levels, showing excellent agreement. Further development to encompass more complicated propellant models, including slosh dynamics, is possible.

McGhee, D. S.↗

NASA NTRS2013

Projected Climate Impacts to South African Maize and Wheat Production in 2055: A Comparison of Empirical and Mechanistic Modeling Approaches

Crop model-specific biases are a key uncertainty affecting our understanding of climate change impacts to agriculture. There is increasing research focus on intermodel variation, but comparisons between mechanistic (MMs) and empirical models (EMs) are rare despite both being used widely in this field. We combined MMs and EMs to project future (2055) changes in the potential distribution (suitability) and productivity of maize and spring wheat in South Africa under 18 downscaled climate scenarios (9 models run under 2 emissions scenarios). EMs projected larger yield losses or smaller gains than MMs. The EMs' median-projected maize and wheat yield changes were 3.6% and 6.2%, respectively, compared to 6.5% and 15.2% for the MM. The EM projected a 10% reduction in the potential maize growing area, where the MM projected a 9% gain. Both models showed increases in the potential spring wheat production region (EM = 48%, MM = 20%), but these results were more equivocal because both models (particularly the EM) substantially overestimated the extent of current suitability. The substantial water-use efficiency gains simulated by the MMs under elevated CO2 accounted for much of the EMMM difference, but EMs may have more accurately represented crop temperature sensitivities. Our results align with earlier studies showing that EMs may show larger climate change losses than MMs. Crop forecasting efforts should expand to include EMMM comparisons to provide a fuller picture of crop-climate response uncertainties.

DSSAT↗

NASA NTRS2014

A New Hybrid Spatio-temporal Model for Estimating Daily Multi-year PM2.5 Concentrations Across Northeastern USA Using High Resolution Aerosol Optical Depth Data

The use of satellite-based aerosol optical depth (AOD) to estimate fine particulate matter PM(sub 2.5) for epidemiology studies has increased substantially over the past few years. These recent studies often report moderate predictive power, which can generate downward bias in effect estimates. In addition, AOD measurements have only moderate spatial resolution, and have substantial missing data. We make use of recent advances in MODIS satellite data processing algorithms (Multi-Angle Implementation of Atmospheric Correction (MAIAC), which allow us to use 1 km (versus currently available 10 km) resolution AOD data.We developed and cross validated models to predict daily PM(sub 2.5) at a 1X 1 km resolution across the northeastern USA (New England, New York and New Jersey) for the years 2003-2011, allowing us to better differentiate daily and long term exposure between urban, suburban, and rural areas. Additionally, we developed an approach that allows us to generate daily high-resolution 200 m localized predictions representing deviations from the area 1 X 1 km grid predictions. We used mixed models regressing PM(sub 2.5) measurements against day-specific random intercepts, and fixed and random AOD and temperature slopes. We then use generalized additive mixed models with spatial smoothing to generate grid cell predictions when AOD was missing. Finally, to get 200 m localized predictions, we regressed the residuals from the final model for each monitor against the local spatial and temporal variables at each monitoring site. Our model performance was excellent (mean out-of-sample R(sup 2) = 0.88). The spatial and temporal components of the out-of-sample results also presented very good fits to the withheld data (R(sup 2) = 0.87, R(sup)2 = 0.87). In addition, our results revealed very little bias in the predicted concentrations (Slope of predictions versus withheld observations = 0.99). Our daily model results show high predictive accuracy at high spatial resolutions and will be useful in reconstructing exposure histories for epidemiological studies across this region.

Air pollution↗

NASA NTRS2007

Construction and Use of Resting 12-Lead High Fidelity ECG "SuperScores" in Screening for Heart Disease

We investigated the accuracy of several conventional and advanced resting ECG parameters for identifying obstructive coronary artery disease (CAD) and cardiomyopathy (CM). Advanced high-fidelity 12-lead ECG tests (approx. 5-min supine) were first performed on a "training set" of 99 individuals: 33 with ischemic or dilated CM and low ejection fraction (EF less than 40%); 33 with catheterization-proven obstructive CAD but normal EF; and 33 age-/gender-matched healthy controls. Multiple conventional and advanced ECG parameters were studied for their individual and combined retrospective accuracies in detecting underlying disease, the advanced parameters falling within the following categories: 1) Signal averaged ECG, including 12-lead high frequency QRS (150-250 Hz) plus multiple filtered and unfiltered parameters from the derived Frank leads; 2) 12-lead P, QRS and T-wave morphology via singular value decomposition (SVD) plus signal averaging; 3) Multichannel (12-lead, derived Frank lead, SVD lead) beat-to-beat QT interval variability; 4) Spatial ventricular gradient (and gradient component) variability; and 5) Heart rate variability. Several multiparameter ECG SuperScores were derivable, using stepwise and then generalized additive logistic modeling, that each had 100% retrospective accuracy in detecting underlying CM or CAD. The performance of these same SuperScores was then prospectively evaluated using a test set of another 120 individuals (40 new individuals in each of the CM, CAD and control groups, respectively). All 12-lead ECG SuperScores retrospectively generated for CM continued to perform well in prospectively identifying CM (i.e., areas under the ROC curve greater than 0.95), with one such score (containing just 4 components) maintaining 100% prospective accuracy. SuperScores retrospectively generated for CAD performed somewhat less accurately, with prospective areas under the ROC curve typically in the 0.90-0.95 range. We conclude that resting 12-lead high-fidelity ECG employing and combining the results of several advanced ECG software techniques shows great promise as a rapid and inexpensive tool for screening of heart disease.

Schlegel, T. T.↗

NASA NTRS1989

Results of including geometric nonlinearities in an aeroelastic model of an F/A-18

An integrated, nonlinear simulation model suitable for aeroelastic modeling of fixed-wing aircraft has been developed. While the author realizes that the subject of modeling rotating, elastic structures is not closed, it is believed that the equations of motion developed and applied herein are correct to second order and are suitable for use with typical aircraft structures. The equations are not suitable for large elastic deformation. In addition, the modeling framework generalizes both the methods and terminology of non-linear rigid-body airplane simulation and traditional linear aeroelastic modeling. Concerning the importance of angular/elastic inertial coupling in the dynamic analysis of fixed-wing aircraft, the following may be said. The rigorous inclusion of said coupling is not without peril and must be approached with care. In keeping with the same engineering judgment that guided the development of the traditional aeroelastic equations, the effect of non-linear inertial effects for most airplane applications is expected to be small. A parameter does not tell the whole story, however, and modes flagged by the parameter as significant also need to be checked to see if the coupling is not a one-way path, i.e., the inertially affected modes can influence other modes.

Buttrill, Carey S.↗

NASA NTRS1999

Delamination Modeling of Composites for Improved Crash Analysis

Finite element crash modeling of composite structures is limited by the inability of current commercial crash codes to accurately model delamination growth. Efforts are made to implement and assess delamination modeling techniques using a current finite element crash code, MSC/DYTRAN. Three methods are evaluated, including a straightforward method based on monitoring forces in elements or constraints representing an interface; a cohesive fracture model proposed in the literature; and the virtual crack closure technique commonly used in fracture mechanics. Results are compared with dynamic double cantilever beam test data from the literature. Examples show that it is possible to accurately model delamination propagation in this case. However, the computational demands required for accurate solution are great and reliable property data may not be available to support general crash modeling efforts. Additional examples are modeled including an impact-loaded beam, damage initiation in laminated crushing specimens, and a scaled aircraft subfloor structures in which composite sandwich structures are used as energy-absorbing elements. These examples illustrate some of the difficulties in modeling delamination as part of a finite element crash analysis.

Fleming, David C.↗

NASA NTRS1999

Delamination Modeling of Composites for Improved Crash Analysis

Fleming, David C.↗

NASA NTRS2002

High-Resolution Simulation of Hurricane Bonnie (1998): Microphysics Validation using TRMM Data

A simulation of Hurricane Bonnie (1998) has been performed using multiple grid nesting to 2 km grid spacing. The simulation is initialized with large-scale analysis fields from the European Center for Medium Range Forecasts and with a bogus vortex inserted via four-dimensional variational data assimilation. The simulation reproduces well the storm intensity, the wavenumber 1 asymmetry of the precipitation field, the occurrence of deep convective towers within the eyewall, and the presence of broad stratiform precipitation regions. Radar and microwave observations from TRMM are used to validate the simulation. Result show excessive graupel production and, to some extent, excessive precipitation production in general by the model. Additional simulations are conducted (and validated by TRMM data) to test parameters and assumptions within the microphysics parameterizations including particle size distributions, particle densities, and assumptions that impact the partitioning of precipitation mass between graupel and snow.

Starr, David OC.↗

NASA NTRS2014

Development and Implementation of Dynamic Scripts to Execute Cycled WRF/GSI Forecasts

Automating the coupling of data assimilation (DA) and modeling systems is a unique challenge in the numerical weather prediction (NWP) research community. In recent years, the Development Testbed Center (DTC) has released well-documented tools such as the Weather Research and Forecasting (WRF) model and the Gridpoint Statistical Interpolation (GSI) DA system that can be easily downloaded, installed, and run by researchers on their local systems. However, developing a coupled system in which the various preprocessing, DA, model, and postprocessing capabilities are all integrated can be labor-intensive if one has little experience with any of these individual systems. Additionally, operational modeling entities generally have specific coupling methodologies that can take time to understand and develop code to implement properly. To better enable collaborating researchers to perform modeling and DA experiments with GSI, the Short-term Prediction Research and Transition (SPoRT) Center has developed a set of Perl scripts that couple GSI and WRF in a cycling methodology consistent with the use of real-time, regional observation data from the National Centers for Environmental Prediction (NCEP)/Environmental Modeling Center (EMC). Because Perl is open source, the code can be easily downloaded and executed regardless of the user's native shell environment. This paper will provide a description of this open-source code and descriptions of a number of the use cases that have been performed by SPoRT collaborators using the scripts on different computing systems.

Zavodsky, Bradley↗

NASA NTRS1993

Modelling, calibration, and error analysis of seven-hole pressure probes

This report describes the calibration of a nonnulling, conical, seven-hole pressure probe over a large range of flow onset angles. The calibration procedure is based on the use of differential pressures to determine the three components of velocity. The method allows determination of the flow angle and velocity magnitude to within an average error of 1.0 deg and 1.0 percent, respectively. Greater accuracy can be achieved by using high-quality pressure transducers. Also included is an examination of the factors which limit the use of the probe, a description of the measurement chain, an error analysis, and a typical experimental result. In addition, a new general analytical model of pressure probe behavior is described, and the validity of the model is demonstrated by comparing it with experimentally measured calibration data for a three-hole yaw meter and a seven-hole probe.

Zillac, G. G.↗

NASA NTRS1983

An analysis of the two-dimensional acoustic field in a nonuniform duct carrying compressible flow

An analytical/numerical linear acoustic solution in a nonuniform two-dimensional duct carrying a compressible mean flow is developed. A quasi-one dimensional mean flow model is employed together with a consistent expression for the cross-flow velocity. The acoustic solution is obtained using the Wave Envelope Method. Numerical results are compared with those of an existing Wave Envelope solution which includes a more general mean flow model. In addition, the singular behavior of the solutions derived in the current work for nearly sonic flow conditions is examined explicitly.

Uenishi, K.↗

NASA NTRS1989

Calibration of seven-hole pressure probes for use in fluid flows with large angularity

Described here is the calibration of a non-nulling, conical, seven-hole pressure probe over a large range of flow onset angles. The calibration procedure is based on the use of differential pressures to determine the three components of velocity. The method allows determination of the flow angle to within 0.5 deg and velocity magnitude to approximately 1.0 percent. Also included is an examination of the factors which limit the use of the probe, a description of the measurement chain, an error analysis, and a typical experimental result. In addition, a new general analytical model of pressure probe behavior is described and the validity of the model is demonstrated by comparing it with experimentally measured calibration data for a three-hole yaw meter and a seven-hole probe.

Zilliac, Gregory G.↗

NASA NTRS1985

Changes of solar luminosity and radius following secular perturbations in the convective envelope

The effect on solar models of several types of slow, spherically symmetric perturbations, acting at various depths within the convective envelope, are calculated. Results are presented on perturbations of the efficiency of convective energy transport (alpha perturbations) and on changes in the nongas component of pressure (beta perturbations). The effects of magnetic fields concentrated near the interface between the radiative core and the convective envelope are explored. It is found that the response and relaxation diagnostics depend both on the type of perturbation and on the depth at which the perturbation is applied. In addition to the general depth dependence, model behavior is sensitive to the presence of major ionization zones near the perturbed layer. The time dependence of the solar model behavior is characterized by an initial hydrostatic reaction followed by a thermal readjustment on a time scale of about 100 years, and finally relaxation to a new thermal equilibrium on a Kelvin time scale.

Endal, A. S.↗