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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 19 records

Augmenting the Structural Dynamics Workflow to Reduce Development Times [Slides]

The structural dynamics workflow at LANL stands to be improved by implementing methods and techniques related to reduced-order finite-element modeling (FEM), pretest predictions, and FEM-test correlation and updating. The benefits of these industry-standard practices are demonstrated in this work. Software used for this project included Ansys 2023 R2 (Mechanical and Spaceclaim), Creo Parametric 8.0, MathCAD Prime 8.0, Matlab R2023b.

42 ENGINEERING↗

Improv Dynamic Workflows

A workflow is a series of dependent computations which are executed to yield an experimental result, much like sheet music describes a musical performance. Dynamic workflows are like improvisational jazz, in which the musicians create unique, situation-driven, collaborative variations on themes. Dynamic workflows can potentially yield better results, save computation, and/or save human decision-making effort versus pre-specified or manual workflows, as they need not run the exhaustive set of studies which might be required in a pre-specified set, and they make their own experimental design decisions at run time. If you have an existing Maestro study where you would like to save computation and/or human time, Improv is for you. Improv provides core capabilities for creating a simple, hierarchical structure over Maestro studies, allowing you to connect ``experimental'' Maestro strudies with decision-making code to select parameters and run corresponding studies.

Goforth, John↗

Multi-objective optimization with an integrated electromagnetics and beam dynamics workflow

In particle accelerators, RF cavities are used to accelerate charged particle beams to designed high energy for physical applications. In a typical accelerator design, the optimization of RF cavities and the optimization of beam dynamics are carried out in separate studies. For a more general and unrestricted accelerator design, a coupled optimization of the RF cavities and the beam parameters is required. For this coupled optimization problem, we have developed an integrated electromagnetics and beam dynamics workflow management system. Within this system, the geometries for a set of cavity components are first adjusted; the field modes are then computed with an electromagnetics program, and imported into a beam dynamics program for beam dynamics simulation. This workflow is encapsulated into a parallel multi-objective optimizer to achieve the integrated accelerator design optimization. A multi fidelity strategy is developed to improve the speed of the optimizer. Furthermore, this integrated global optimization capability is illustrated using a photoinjector design example and yields an improved design.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Software-Defined Data Center Network Architecture using VXLAN-based BGP EVPN for Dynamic Workflows in a Supercomputing Environment (VXLAN-based BGP EVPN Fabric for HPC) v1

This software repository automates the deployment of a multi-vendor VXLAN-based BGP EVPN architecture, leveraging Containerlab to instantiate a stretched CLOS topology. It integrates Linux, Nokia SR Linux, and Arista cEOS, using BGP for underlay, overlay, and topology extension. The software enables rapid prototyping and testing of advanced network configurations. Its key advantage lies in providing a dynamic, programmable environment for research and development of critical technologies supporting dynamic workflows within supercomputing environments, surpassing the limitations of static, vendor-locked alternatives by fostering interoperability and agility.

Kumar, Ronal [Lawrence Berkeley National Laborator↗

Augmenting the Structural Dynamics Workflow to Reduce Development Times

The success of future systems development at Los Alamos National Laboratory (LANL) depends, in part, on the ability to make informed decisions quickly. This is particularly true when asked to perform structural-mechanical analyses across many design alternatives. To help reduce development time, techniques in reduced-order finite-element modeling (FEM), pretest predictions, and FEM-test correlation and updating were demonstrated in the fiscal year (FY) 23 Technology and Demonstration Project (TED): Augmenting the Structural Dynamics Workflow to Reduce Development Times. This report expands on the TED project final report, LA-UR-34022.

42 ENGINEERING↗

Transitioning to Dynamic Workflows at INL

We investigated the opportunity to transition from paper and PDF procedures to more interactive workflows. This transition has been considered because evidence shows that these more interactive digital workflows increase safety and efficiency, while making complex procedures easier for the user to follow and track. The culmination of the project is a report and presentation for the lab deputy director at the end of the fiscal year, in which our team will recommend a path forward based on the findings from literature, employee interviews, and other information gathering activities.

99 GENERAL AND MISCELLANEOUS↗

Demonstration of an AI-driven workflow for dynamic x-ray spectroscopy

X-ray absorption near edge structure (XANES) spectroscopy is a powerful technique for characterizing the chemical state and symmetry of individual elements within materials, but requires collecting data at many energy points which can be time-consuming. While adaptive sampling methods exist for efficiently collecting spectroscopic data, they often lack domain-specific knowledge about the structure of XANES spectra. Here we demonstrate a knowledge-injected Bayesian optimization approach for adaptive XANES data collection that incorporates understanding of spectral features like absorption edges and pre-edge peaks. We show this method accurately reconstructs the absorption edge of XANES spectra using only 15–20% of the measurement points typically needed for conventional sampling, while maintaining the ability to determine the x-ray energy of the sharp peak after the absorption edge with errors less than 0.03 eV, the absorption edge with errors less than 0.1 eV; and overall root-mean-square errors less than 0.005 compared to traditionally sampled spectra. Our experiments on battery materials and catalysts demonstrate the method’s effectiveness for both static and dynamic XANES measurements, improving data collection efficiency and enabling better time resolution for tracking chemical changes. This approach advances the degree of automation in XANES experiments, reducing the common errors of under- or over-sampling points near the absorption edge and enabling dynamic experiments that require high temporal resolution or limited measurement time.

Bayesian optimization↗

Navier: Dataflow Architecture for Computation Chemistry

Navier’s objectives were two evaluate the use of emerging technologies, especially dataflow accelerators, for high-performance computing (HPC) applications, specifically in the domain of chemistry, and to develop a prototype software stack to support such applications. Navier builds on capabilities previously developed by synergistic projects, such as PNNL Data Model Convergence (DMC) LDRD Hardware Advanced Workflows (HAW) and DuOMO, as well as DOE ARIAA. Throughout its 18 months, the Navier team developed new capabilities and artifacts at all levels of the HW/SW stack, provided a seamless way to integrate novel computing architectures (Sambanova SN10 and Xilinx Versal AI) into an existing software stack, developed chemistry workflows, data analytics tools, and HPC molecular dynamics workflows that leverage the developed stack and PNNL institutional investments in emerging architectures. Navier also explored the use of active learning to accelerate a computational chemistry workflow for organic molecules on PNNL Junction cluster (in collaboration with AMD/Xilinx). Navier developed tools, methodologies, and studies for hardware software co-design and (sparse) dataflow accelerators that are composable and can be used together or separately. These methodologies are now used in other projects, such as DOE AMAIS and HPDA. This report describes Navier’s achievement, the developed tools and methodologies, and the research findings and conclusions.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

A simulation framework for evaluating electronic order workflows in integrated health records

Electronic health record (EHR) systems are critical to modern healthcare delivery, yet the dynamic workflows that govern electronic order processing remain underexplored. Inefficiencies in these digital pathways can cause delays in care, repetitive workloads, and even patient harm. This study presents a discrete-event simulation framework used to reconstruct and evaluate EHR-based order workflows in a large integrated healthcare system. Using real-world data extracted from the Veterans Health Administration’s Corporate Data Warehouse, the authors mapped order events to standardized state transitions and modeled their progression across different facilities of varying complexity levels. After being calibrated with empirical distributions of transition times and validated against observed time-in-system metrics, the simulation demonstrates close alignment with historical performance. Scenario analyses reveal that resource capacity constraints significantly amplify the impact of electronic order surges, which are reflected in the disproportionate growth in backlogs and processing delays. Adjustments in transition probabilities further increased recirculation and extended workflow paths. Network-based analysis identified Reserved, InProgress, and Completed as structurally critical states that function as hubs within the process network but the transitions in-between also act as major bottlenecks. These results showcased the effectiveness of simulation-based approaches in monitoring EHR order processing performance and evaluating consequences of workflow changes on healthcare network resources planning. The proposed simulation framework provides a scalable data-driven tool to support operational decision-making and improve the efficiency of electronic order management in complex healthcare environments.

Engineering↗

Physics-based reward driven image analysis in microscopy

The rise of electron microscopy has expanded our ability to acquire nanometer and atomically resolved images of complex materials. The resulting vast datasets are typically analyzed by human operators, an intrinsically challenging process due to the multiple possible analysis steps and the corresponding need to build and optimize complex analysis workflows. We present a methodology based on the concept of a Reward Function coupled with Bayesian Optimization, to optimize image analysis workflows dynamically. The Reward Function is engineered to closely align with the experimental objectives and broader context and is quantifiable upon completion of the analysis. Here, cross-section, high-angle annular dark field (HAADF) images of ion-irradiated (Y, Dy)Ba 2 Cu 3 O 7–δ thin-films were used as a model system. The reward functions were formed based on the expected materials density and atomic spacings and used to drive multi-objective optimization of the classical Laplacian-of-Gaussian (LoG) method. These results can be benchmarked against the DCNN segmentation. This optimized LoG* compares favorably against DCNN in the presence of the additional noise. We further extend the reward function approach towards the identification of partially-disordered regions, creating a physics-driven reward function and action space of high-dimensional clustering. We pose that with correct definition, the reward function approach allows real-time optimization of complex analysis workflows at much higher speeds and lower computational costs than classical DCNN-based inference, ensuring the attainment of results that are both precise and aligned with the human-defined objectives.

47 OTHER INSTRUMENTATION↗

C3F: Collaborative Container-based Model Coupling Framework

Solving complex real-world grand challenge problems requires in-depth collaboration of researchers from multiple disciplines. Such collaboration often involves harnessing multiscale and multi-dimensional data and combining models from different fields to simulate systems. However, the progress on this front has been limited mainly due to significant gaps in domain knowledge and tools that are typically employed in silos of the domains. Researchers from different fields face considerable barriers to understanding and reusing each other’s data/models in order to collaborate effectively. For example, in solving the global sustainability problems, researchers from hydrology, climate science, agriculture, and economics need to run their respective models to study different components of the global and local food, energy and water systems while, at the same time, need to interact with other researchers and integrate the results of one model with another. Developing this kind of model coupling workflow calls for (1) a large amount of data being processed and exchanged across domains and organizations, (2) identifying and processing the output of one model to make it ready for integration into another model, (3) controlling the workflow dynamically so that it runs until a certain convergence condition or other criteria is met, and (4) close collaboration among the modelers to explore, tune, and test the configuration and data transformation needed to link the models. We have developed C3F, a flexible collaborative model coupling framework to help researchers accelerate their model integration and linking efforts by leveraging advanced cyberinfrastructure such as high-performance computing and virtual containers. In this paper, we describe our experience and lessons learned in developing this cyberinfrastructure solution to support the linking of Water Balance Model (WBM) and SIMPLE-G agricultural economic model in an NSF funded INFEWS project and a DOE-funded Program on Coupled Human and Earth Systems (PCHES) to study the implications of groundwater scarcity for food-energy-water systems. The C3F model coupling framework can be extended to facilitate other model linkages as well.

containerization↗

Assessing Edge Localized Mode (ELM) Mitigation by Pellet Triggering in Smallest-Possible Affordable Robust Compact (SPARC) Low-Collisionality Discharges

Simulations of pellet edge-localized mode (ELM) triggering with the M3D-C1 code confirmed experimentally observed pellet mass thresholds in low-collisionality DIII-D discharges and predicted extremely large thresholds in ITER [A. Wingen et al, Nucl. Fusion 64, 066015(2024)]. The linear (static) and nonlinear (dynamic) workflows developed in this previous work are now applied to the SPARC tokamak. Multiple synthetic equilibria for the high-performance H-mode scenario are tested for MHD stability without pellets using the linear workflow and ELITE simulations; a stable one is identified. Pellets of various mass are injected along an inboard, near-midplane trajectory in the M3D-C1 simulation. No pellet mass threshold for ELM triggering can be found for realistic pellet masses, concluding that fueling from this injection location would not trigger ELMs. A poloidal scan of possible injection locations shows very high thresholds on the high-field side and reasonable thresholds on the low-field-side (LFS). Based on results of this work the location for a LFS injection was finalized in the SPARC design. For this LFS injection the pellet mass threshold is determined using the linear workflow, aligning well with the poloidal scan.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Assessing Edge Localized Mode (ELM) Mitigation by Pellet Triggering in Smallest-Possible Affordable Robust Compact (SPARC) Low-Collisionality Discharges

Simulations of pellet edge-localized mode (ELM) triggering with the M3D-C1 code confirmed experimentally observed pellet mass thresholds in low-collisionality DIII-D discharges and predicted extremely large thresholds in ITER. The linear (static) and nonlinear (dynamic) workflows developed in this previous work are now applied to the SPARC tokamak. Multiple synthetic equilibria for the high-performance H-mode scenario are tested for MHD stability without pellets using the linear workflow and ELITE simulations; a stable one is identified. Pellets of various mass are injected along an inboard, near-midplane trajectory in the M3D-C1 simulation. No pellet mass threshold for ELM triggering can be found for realistic pellet masses, concluding that fueling from this injection location would not trigger ELMs. A poloidal scan of possible injection locations shows very high thresholds on the high-field side and reasonable thresholds on the low-field-side (LFS). Based on results of this work the location for a LFS injection was finalized in the SPARC design. For this LFS injection the pellet mass threshold is determined using the linear workflow, aligning well with the poloidal scan.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Co-scheduling Ensembles of In Situ Workflows

Molecular dynamics (MD) simulations are widely used to study large-scale molecular systems. HPC systems are ideal platforms to run these studies, however, reaching the necessary simulation timescale to detect rare processes is challenging, even with modern supercomputers. To overcome the timescale limitation, the simulation of a long MD trajectory is replaced by multiple short-range simulations that are executed simultaneously in an ensemble of simulations. Analyses are usually co-scheduled with these simulations to efficiently process large volumes of data generated by the simulations at runtime, thanks to in situ techniques. Executing a workflow ensemble of simulations and their in situ analyses requires efficient co- scheduling strategies and sophisticated management of computational resources so that they are not slowing down each other. In this paper, we propose an efficient method to co-schedule simulations and in situ analyses such that the makespan of the workflow ensemble is minimized. We present a novel approach to allocate resources for a workflow ensemble under resource constraints by using a theoretical framework modeling the workflow ensemble’s execution. We evaluate the proposed approach using an accurate simulator based on the WRENCH simulation framework on various workflow ensemble configurations. Results demonstrate the significance of co-scheduling simulations and in situ analyses that couple data together to benefit from data locality, in which inefficient scheduling decisions can lead to slowdown in makespan up to a factor of 30.

Do, Tu Mai Anh↗

Integrating Ultra-Coarse-Grained Protein Models into Accessible Workflows for Multiscale Molecular Dynamics

To capture protein conformational transitions using molecular dynamics (MD), several simulation resolutions covering different spatial and temporal scales are typically needed. All-atom (AA) simulations provide fine resolution, but are computationally infeasible for large systems over longer durations. Coarse-grained (CG) and ultra-coarse-grained (UCG) models have a lower resolution and computational cost while still being able to conserve essential protein features. Prior work on a Multiscale Machinelearned Modeling Infrastructure (MuMMI) combined both AA and CG simulations to study RAS-RAF protein interactions, leveraging CG models for longer time scales and using AA to investigate unusual conformations in greater detail. However, MuMMI is still resource-intensive, and this study aims to maximize exploration of the protein conformational space while reducing computational cost. In this paper, we build on prior work that integrates UCG models based on heterogeneous elastic network modeling (hENM) into the MuMMI workflow. We demonstrate that UCG models enable accurate sampling of protein conformations, focusing on simulating RAS-RAF protein interactions. Using higher-resolution CG Martini simulation data, we can automatically refine intramolecular interactions in UCG models. We present a scalable Python package that uses fluctuations observed in higher-resolution CG Martini simulations to estimate bond coefficients of the UCG model. We built novel machine learning-based backmapping methods to recover more detailed CG Martini structures from UCG structures, using diffusion models to learn the mapping between scales. Finally, we present UCG-mini-MuMMI, an accessible and less compute-intensive version of MuMMI as a resource for the scientific community. Incorporating UCG models into MD studies is applicable to a broad range of systems and proteins, and our study offers insights into the advantages and limitations of these methods.

Chemical structure↗

Enabling Command-and-Control in Advanced In Situ Workflows

Scientific discovery is progressing towards autonomous science with the combination of scientific instruments, high-performance computing, and artificial intelligence in complex workflows. This evolution introduces new requirements for managing scientific workflows, including feedback loops, near real-time constraints, and the ability to dynamically control workflow execution. In situ workflows that analyze and visualize data as it is generated are well-suited to satisfy stringent time constraints and their iterative nature offers greater opportunities for command-and-control. However, only a few of the many workflow management systems available have been specifically designed to manage in situ workflows and often lack support for automated feedback loops that allow analysis and visualization components to interact with the main scientific data producer. To address this need, we present in this paper how to add command-and-control capabilities to a workflow management system. We identify the functional design requirements of such a command-and-control system, detail its architecture, interface, and core mechanisms, and illustrate how advanced in situ workflows can leverage command-and-control in three use cases: graceful termination with checkpoint, dynamic and adaptive data reduction, and event-triggered analysis.

Mehta, Kshitij [ORNL] (ORCID:0000000297149981)↗