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At least 19 records

Specifications for a Federal Information Processing Standard Data Dictionary System

The development of a software specification that Federal agencies may use in evaluating and selecting data dictionary systems (DDS) is discussed. To supply the flexibility needed by widely different applications and environments in the Federal Government, the Federal Information Processing Standard (FIPS) specifies a core DDS together with an optimal set of modules. The focus and status of the development project are described. Functional specifications for the FIPS DDS are examined for the dictionary, the dictionary schema, and the dictionary processing system. The DDS user interfaces and DDS software interfaces are discussed as well as dictionary administration.

Goldfine, A.↗

Enabling Open and Interoperable Science: Multi-Omics Data Processing Platform with NASA GeneLab Standardized Bioinformatics Workflows for Space and Earth Research

Multi-omics biological data continues to be generated at an astounding pace. Genomics, transcriptomics, metabolomics, and proteomics, or collectively known as multi-omics data, are used to assess biological functions, and provide invaluable insights into human, animal, plant, and environmental health both on Earth and in Space. Despite the abundance of these valuable data, the need for bioinformatics expertise, particularly as it relates to the niche filed of space biology, and a lack of accessible resources for processing these data limit their usefulness in deriving biological insights. The NASA Open Science Data Repository (OSDR) provides access to omics data from various spaceflight and analog studies. To enhance the accessibility and reusability of these data, GeneLab (part of OSDR) designs and implements standardized, community-driven, open-source bioinformatics workflows to transform raw omics data into standardized processed data. Currently, GeneLab-processed data from hundreds of space studies have been reused for meta-analyses. This has led to new insights and scientific publications that extend beyond the initial research, thereby enriching our understanding of molecular-scale biological responses to the space environment. To make these bioinformatics workflows open and accessible, GeneLab teamed up with DOE-funded initiatives, including the National Microbiome Data Collaborative (NMDC), to create the NASA EDGE [Empowering the Development of Genomics Expertise] Bioinformatics web-based platform. NASA EDGE utilizes shared compute resources to run the GeneLab standardized bioinformatics workflows, which eliminates the need for researchers to have their own high performance computing cluster. The web-based platform makes complicated biological analyses incredibly easy to perform, thus expanding the reach of these analyses to bioinformatics novices, students, and even citizen scientists enabling them to contribute to scientific discoveries and progress. The authors will demonstrate how the NASA EDGE platform can be used to process microbial omics data hosted on OSDR as well as user-generated omics datasets using GeneLab’s standard workflows.

Amanda M. Saravia-Butler↗

WFIP3 Lidar / Processed Data

This dataset contains standardized, processed data from the Leosphere WindCube V2.1 deployed at Nantucket, MA for WFIP-3. The lidar was tall tower validated in May 2023.

17 WIND ENERGY↗

NASA's Earth Science Data Systems Standards Process Experiences

NASA has impaneled several internal working groups to provide recommendations to NASA management on ways to evolve and improve Earth Science Data Systems. One of these working groups is the Standards Process Group (SPC). The SPG is drawn from NASA-funded Earth Science Data Systems stakeholders, and it directs a process of community review and evaluation of proposed NASA standards. The working group's goal is to promote interoperability and interuse of NASA Earth Science data through broader use of standards that have proven implementation and operational benefit to NASA Earth science by facilitating the NASA management endorsement of proposed standards. The SPC now has two years of experience with this approach to identification of standards. We will discuss real examples of the different types of candidate standards that have been proposed to NASA's Standards Process Group such as OPeNDAP's Data Access Protocol, the Hierarchical Data Format, and Open Geospatial Consortium's Web Map Server. Each of the three types of proposals requires a different sort of criteria for understanding the broad concepts of "proven implementation" and "operational benefit" in the context of NASA Earth Science data systems. We will discuss how our Standards Process has evolved with our experiences with the three candidate standards.

Ullman, Richard E.↗

Lidar / Processed Data

This dataset contains processed, standardized data from the UND scanning Doppler lidar at WFIP3's BARG site, consisting of range- and time-resolved measurements of radial velocity, attenuated backscatter, intensity, and spectral width. We note that the beam azimuth angles are NOT referenced to true north.

17 WIND ENERGY↗

CACO Site - ANL Scanning Doppler Lidar / Processed Data

This dataset contains processed, standardized data from the ANL scanning Doppler lidar, consisting of range- and time-resolved measurements of radial velocity, attenuated backscatter, intensity, and spectral width. We note that the beam azimuth angles are NOT referenced to true north.

17 WIND ENERGY↗

Lidar / Processed Data

This dataset contains processed, standardized data from the UND scanning Doppler lidar at WFIP3's BARG site, consisting of range- and time-resolved measurements of radial velocity, attenuated backscatter, intensity, and spectral width. We note that the beam azimuth angles are NOT referenced to true north.

17 WIND ENERGY↗

Optimizing Single Nuclei Sequencing of Brain Samples From Space Flown Mice Across Age and Strain

The NASA GeneLab Sample Processing Laboratory offers high-throughput sequencing services to NASA-funded space biology researchers. Space biology studies have specific challenges such as low sample numbers, introducing susceptibility to batch effects from sample handling. These issues are compounded by complex protocols such as single-nuclei isolation and sequencing, which has recently become an attractive methodology for assessing the cellular diversity within spaceflight samples. High quality single-nuclei sequencing requires reproducible protocols to dissociate tissue and generate clean suspension of intact single nuclei. Producing single-nuclei suspension from brain tissue is particularly challenging due to cell type heterogeneity and the myelin sheath that carries over into the nuclei suspension as debris. Current procedures tend to be time consuming and sometimes include steps that can alter gene expression and create cell-type bias. Commercially available nuclei isolation kits, such as the 10X Genomics nuclei isolation kit, offers a streamlined way to process samples for nuclei isolation, thereby minimizing batch effects and enabling reproducibility. In this study, we report on the performance of the 10X Genomics nuclei isolation kit and Chromium Next GEM Single Cell Multiome ATAC + Gene Expression kit to generate sequencing libraries from space-flown mouse brain samples. Single nuclei sequencing was performed on frozen mouse brain tissue from two spaceflight missions, Rodent Research-10 (RR-10) and RR Reference Mission-2 (RRRM-2). RR-10 mice were female B6129SF2/J, euthanized at 18-19 weeks whereas RRRM-2 mice were female C57BL/6NTac, euthanized at 20 or 37 weeks. Sequencing data was processed using standard GeneLab data processing pipelines. We report evaluation of the performance of the 10X Genomics nuclei isolation kit for spaceflight samples from mouse brain, and evaluation of reproducibility across different mouse strains and age groups. We also report preliminary scientific results including cell type inference, cell clustering, and differentially expressed genes and pathways between spaceflight and ground control samples.

RR-10↗

Symmetric Phase Only Filtering for Improved DPIV Data Processing

The standard approach in Digital Particle Image Velocimetry (DPIV) data processing is to use Fast Fourier Transforms to obtain the cross-correlation of two single exposure subregions, where the location of the cross-correlation peak is representative of the most probable particle displacement across the subregion. This standard DPIV processing technique is analogous to Matched Spatial Filtering, a technique commonly used in optical correlators to perform the crosscorrelation operation. Phase only filtering is a well known variation of Matched Spatial Filtering, which when used to process DPIV image data yields correlation peaks which are narrower and up to an order of magnitude larger than those obtained using traditional DPIV processing. In addition to possessing desirable correlation plane features, phase only filters also provide superior performance in the presence of DC noise in the correlation subregion. When DPIV image subregions contaminated with surface flare light or high background noise levels are processed using phase only filters, the correlation peak pertaining only to the particle displacement is readily detected above any signal stemming from the DC objects. Tedious image masking or background image subtraction are not required. Both theoretical and experimental analyses of the signal-to-noise ratio performance of the filter functions are presented. In addition, a new Symmetric Phase Only Filtering (SPOF) technique, which is a variation on the traditional phase only filtering technique, is described and demonstrated. The SPOF technique exceeds the performance of the traditionally accepted phase only filtering techniques and is easily implemented in standard DPIV FFT based correlation processing with no significant computational performance penalty. An "Automatic" SPOF algorithm is presented which determines when the SPOF is able to provide better signal to noise results than traditional PIV processing. The SPOF based optical correlation processing approach is presented as a new paradigm for more robust cross-correlation processing of low signal-to-noise ratio DPIV image data."

Wernet, Mark P.↗

Split-screen display system and standardized methods for ultrasound image acquisition and multi-frame data processing

A standardized acquisition methodology assists operators to accurately replicate high resolution B-mode ultrasound images obtained over several spaced-apart examinations utilizing a split-screen display in which the arterial ultrasound image from an earlier examination is displayed on one side of the screen while a real-time "live" ultrasound image from a current examination is displayed next to the earlier image on the opposite side of the screen. By viewing both images, whether simultaneously or alternately, while manually adjusting the ultrasound transducer, an operator is able to bring into view the real-time image that best matches a selected image from the earlier ultrasound examination. Utilizing this methodology, dynamic material properties of arterial structures, such as IMT and diameter, are measured in a standard region over successive image frames. Each frame of the sequence has its echo edge boundaries automatically determined by using the immediately prior frame's true echo edge coordinates as initial boundary conditions. Computerized echo edge recognition and tracking over multiple successive image frames enhances measurement of arterial diameter and IMT and allows for improved vascular dimension measurements, including vascular stiffness and IMT determinations.

Selzer, Robert H.↗

A portable real-time data processing system for standard meteorological radiosondes

The UMET-1 is a microprocessor-based portable system for automatic real-time processing of flight data transmitted from the standard RAWINSONDE upper atmosphere meteorological balloonsonde. The first 'target system' is described which was designed to receive data from a mobile tracking and telemetry receiving station (TRADAT), as the balloonsonde ascends to apogee. After balloon-burst, the UMET-1 produces user-ready hardcopy.

Staffanson, F. L.↗

Automatic N(h,t) profiles of the ionosphere with a digital ionosonde

A method is described to accomplish automatic data selection and profile inversion to obtain ionospheric electron density profiles from digitized radio soundings. The profile inversion is based on a well-established formulation by which the optimum radio frequency sounding intervals can be specified from an approximate knowledge of the profile; the expected virtual height coordinates (h) at these frequencies (f) are estimated, and procedures are then used to select h(f) observations nearest the predicted coordinates from a subsequent digital ionogram. From these the next profile is obtained. The process adaptively follows the changing shape and detail of the profile. The procedure requires an average of 15 sec per profile on a standard data processing computer, and can be adapted, with benefit to online real-time use in a digital ionosonde.

Wright, J. W.↗

The Marine and Hydrokinetic ToolKit for Data Quality Control and Analysis: Preprint

The ability to handle data is critical at all stages of marine energy (ME) development. The marine hydrokinetic toolkit (MHKiT) is an open-source marine energy software, which includes modules for ingesting, applying quality control, processing, visualizing, and managing data. MHKiT-Python and MHKiT-MATLAB provide robust and verified functions that are needed by the ME community to standardize data processing. Calculations and visualizations adhere to International Electrotechnical Commission (IEC) technical specifications and other guidelines. A resource assessment of NDBC buoy 46050 near PACWAVE is performed using MHKiT and discusses comparisons to the resource assessment provided performed by Dunkel et al.

marine energy↗

The Marine and Hydrokinetic Toolkit (Mhkit) for Data Quality Control and Analysis

The ability to handle data is critical at all stages of marine energy (ME) development. The marine hydrokinetic toolkit (MHKiT) is an open-source marine energy software, which includes modules for ingesting, applying quality control, processing, visualizing, and managing data. MHKiT-Python and MHKiT-MATLAB provide robust and verified functions that are needed by the ME community to standardize data processing. Calculations and visualizations adhere to International Electrotechnical Commission (IEC) technical specifications and other guidelines. A resource assessment of NDBC buoy 46050 near PACWAVE is performed using MHKiT and discusses comparisons to the resource assessment provided performed by Dunkel et al.

marine energy↗

Recent Advances in Techniques for Hyperspectral Image Processing

Imaging spectroscopy, also known as hyperspectral imaging, has been transformed in less than 30 years from being a sparse research tool into a commodity product available to a broad user community. Currently, there is a need for standardized data processing techniques able to take into account the special properties of hyperspectral data. In this paper, we provide a seminal view on recent advances in techniques for hyperspectral image processing. Our main focus is on the design of techniques able to deal with the highdimensional nature of the data, and to integrate the spatial and spectral information. Performance of the discussed techniques is evaluated in different analysis scenarios. To satisfy time-critical constraints in specific applications, we also develop efficient parallel implementations of some of the discussed algorithms. Combined, these parts provide an excellent snapshot of the state-of-the-art in those areas, and offer a thoughtful perspective on future potentials and emerging challenges in the design of robust hyperspectral imaging algorithms

Plaza, Antonio↗

Automating Detection and Diagnosis of Faults, Failures, and Underperformance in PV Plants

The project developed hybrid physics-based and machine-learning methods for near-real-time detection of balance-of-system faults (e.g., string, combiner, and tracker outages) in utility-scale Photovoltaic plants, achieving over 50% true positive rates with under 10% false positives and significantly reducing engineering setup time. In the extended phase, the scope expanded to plant-level underperformance analysis and industry benchmarking through the SUPER.epri.com platform. SUPER standardizes data processing and performance metrics across more than 9 GWac and 120+ plants, enabling robust comparisons and insights into loss rates, inverter downtime, and capacity degradation.

14 SOLAR ENERGY↗