Spatial and temporal variability of phytoplankton pigment off northern California during Coastal Ocean Dynamics Experiment 1
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Abbott, Mark R.↗
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Surface heating and patchiness in the coastal ocean off central California during a wind relaxation event
The difference between the temperature of the ocean at 4-cm and 2-m depth was continuously monitored during a cruise to the coastal transition zone off Point Arena, California, during June 1987. The two temperatures were coincident most of the time but diverged during one nearshore leg of the cruise where large temperature differences of up to 4.7 C were observed between the 4-cm and 2-m sensors, in areas which were separated by regions where the two temperatures were coincident as usual. The spatial scale of this 'patchy' thermal structure was about 5-10 km. A mixed layer model (Garwood, 1977) was used to simulate the near surface stratification when forced by the observed wind stress, surface heating, and optical clarity of the water. The model produced a thin strongly stratified surface layer at stations where exceptionally high turbidity was observed but did not produce such features otherwise. This simple model could not explain the horizontal patchiness in the thermal structure, which was likely due to patchiness in the near-surface chlorophyll distributions or to submesoscale variability of the surface wind stress.
Ramp, Steven R.↗
Infrastructure for Training and Partnershipes: California Water and Coastal Ocean Resources
The purpose of this project was to advance the existing ICESS/Bren School computing infrastructure to allow scientists, students, and research trainees the opportunity to interact with environmental data and simulations in near-real time. Improvements made with the funding from this project have helped to strengthen the research efforts within both units, fostered graduate research training, and helped fortify partnerships with government and industry. With this funding, we were able to expand our computational environment in which computer resources, software, and data sets are shared by ICESS/Bren School faculty researchers in all areas of Earth system science. All of the graduate and undergraduate students associated with the Donald Bren School of Environmental Science and Management and the Institute for Computational Earth System Science have benefited from the infrastructure upgrades accomplished by this project. Additionally, the upgrades fostered a significant number of research projects (attached is a list of the projects that benefited from the upgrades). As originally proposed, funding for this project provided the following infrastructure upgrades: 1) a modem file management system capable of interoperating UNIX and NT file systems that can scale to 6.7 TB, 2) a Qualstar 40-slot tape library with two AIT tape drives and Legato Networker backup/archive software, 3) previously unavailable import/export capability for data sets on Zip, Jaz, DAT, 8mm, CD, and DLT media in addition to a 622Mb/s Internet 2 connection, 4) network switches capable of 100 Mbps to 128 desktop workstations, 5) Portable Batch System (PBS) computational task scheduler, and vi) two Compaq/Digital Alpha XP1000 compute servers each with 1.5 GB of RAM along with an SGI Origin 2000 (purchased partially using funds from this project along with funding from various other sources) to be used for very large computations, as required for simulation of mesoscale meteorology or climate.
Siegel, David A.↗
Correlation of ocean truth data with ERTS-1 imagery: California coastal sites in Monterey Bay, Santa Barbara Channel, and Santa Monica Bay
There are no author-identified significant results in this report.
Anikouchine, W. A.↗
The Changing California Coast: The Effect of a Variable Water Budget on Coastal Vegetation Succession
The land-ocean interface along the central coast of California is one of the most diverse biogeographic regions of the state. This area is composed of a species-rich mosaic of coastal grassland, shrubland, and forest vegetation types. An acceleration of conifer encroachment into shrublands and shrub encroachment into grasslands along the coast has been recently documented. These vegetation changes are believed to be driven primarily by fire suppression and changing grazing patterns. Climatic variables such as precipitation, fog, cloud cover, temperature, slope, and elevation also play an important role in vegetation succession. Our study area is located along the central California coast, which is characterized by a precipitation gradient from the relatively wetter and cooler north to the drier and warmer south. Some studies indicate changing fog patterns along this coast, which may greatly impact vegetation. A decrease in water availability could slow succession processes. The primary objective of this project is to determine if vegetation succession rates are changing for the study area and to identify climate and ecosystem variables which contribute to succession, specifically the transition among grassland, shrubland, and forest. To identify vegetation types and rates of succession, we classified two Landsat TM 5 scenes from 1985 to 2010 with a resulting overall accuracy of 82.4%. Vegetation succession was correlated to changes in maximum and minimum temperatures, precipitation, and elevation for each sub-region of the study area. Fog frequency was then compared between the northern and southern regions of the study area for determining the spatial relation between fog frequency and the percent of vegetation change.
Hsu, Wei-Chen↗
Identification of Sea Surface Temperature and Sea Surface Salinity Fronts along the California Coast: Application Using Saildrone and Satellite Derived Products
Coastal upwelling regions are one of the most dynamic areas of the world’s oceans. The California and Baja California Coasts are impacted by both coastal upwelling and the California Current, leading to frontal activity that is captured by gradients in both Sea Surface Temperature (SST) and Sea Surface Salinity (SSS). Satellite data are a great source of spatial data to study fronts. However, biases near coastal areas and coarse resolutions can impair its usefulness in upwelling areas. In this work gradients in SST from NASA Multi-Scale Ultra-High Resolution (MUR) and in two SSS products derived from the Soil Moisture Active Passive (SMAP) NASA mission are compared directly with gradients derived from the Saildrone uncrewed vehicles to validate the gradients as well as to assess their ability to detect known frontal features. The three remotely sensed data sets (MURSST/JPL, SMAP SSS/RSS, SMAP SSS) were co-located with the Saildrone data prior to the calculation of the gradients. Wavelet analysis is used to determine how well the satellite derived SST and SSS products are reproducing the Saildrone derived gradients. Overall results indicate the remote sensing products are reproducing features of known areas of coastal upwelling. Differences between the SST and SSS gradients are mainly associated with the limitations of the microwave derived SSS coverage near land and its reduced spatial resolution. The results are promising for using remote sensing data sets to monitor frontal structure along the California Coast and the application to long term changes in coastal upwelling and dynamics.
Sea Surface Salinity↗
Southern California Water Resources: Using NASA Earth Observations to Monitor Seagrass Extent and Water Quality Parameters in Southern California
Eelgrass (Zostera marina) is a species of submerged aquatic vegetation found in shallow bays and estuaries with soft seafloors. Eelgrass is recognized for providing ecosystem benefits, such as carbon sequestration, sediment stabilization, water clarification, and fish and wildlife habitats. However, eelgrass is impacted by both marine and terrestrial threats associated with climate change. In this project, we worked with the Southern California Coastal Water Research Project, the National Oceanic and Atmospheric Administration’s National Marine Fisheries Service, and the State of California San Diego Regional Water Quality Control Board to investigate water quality parameters (i.e., chlorophyll-a concentration, sea surface temperature, and turbidity) associated with eelgrass in Newport Bay and Mission Bay, California. The team used Landsat 8 Operational Land Imager and Thermal Infrared Sensor, Landsat 9 Operational Land Imager-2 and Thermal Infrared Sensor-2, Sentinel-2 MultiSpectral Instrument, and ECOsystem Spaceborne Thermal Radiometer Experiment on Space Station land surface temperature and cloud mask to create a time series of these water quality parameters from 2019–2023. We found that the parameters followed cyclical, seasonal patterns with turbidity and sea surface temperature peaking in the summer. We did not find that the parameters had changed significantly over longer time periods. These results will be used in a model developed by the Southern California Coastal Water Research Project to assess eelgrass ecosystem health and predict ecosystem occupancy in the future.
Katya Beener↗
A Three-Dimensional Variational Data Assimilation Scheme for the Regional Ocean Modeling System: Implementation and Basic Experiments
A three-dimensional variational data assimilation scheme for the Regional Ocean Modeling System (ROMS), named ROMS3DVAR, has been described in the work of Li et al. (2008). In this paper, ROMS3DVAR is applied to the central California coastal region, an area characterized by inhomogeneity and anisotropy, as well as by dynamically unbalanced flows. A method for estimating the model error variances from limited observations is presented, and the construction of the inhomogeneous and anisotropic error correlations based on the Kronecker product is demonstrated. A set of single observation experiments illustrates the inhomogeneous and anisotropic error correlations and weak dynamic constraints used. Results are presented from the assimilation of data gathered during the Autonomous Ocean Sampling Network (AOSN) experiment during August 2003. The results show that ROMS3DVAR is capable of reproducing complex flows associated with upwelling and relaxation, as well as the rapid transitions between them. Some difficulties encountered during the experiment are also discussed.
California coastal ocean↗
Coastal California Water Resources II: Utilizing NASA Earth Observations to Detect and Assess the Impacts of Estuarine Breach Events for Improved Coastal Wetland Monitoring and Management
Estuaries are dynamic environments that provide a host of vital ecosystem services. California’s Marine Life Protection Act protects such ecosystems by creating Marine Protected Areas. California has approximately 440,000 acres of estuarine habitats as well as 23 Estuarine Marine Protected Areas (EMPAs); thus, in situ data collection is often difficult due to time and resource constraints. This project used remote sensing to gather data that examined the health and dynamics of California EMPAs in order to supplement ground-based field measurements. Through the use of Landsat 8 Operational Land Imager (OLI) and Thermal Infrared Sensor (TIRS), Sentinel-2 Multispectral Instrument (MSI) and Sentinel-1 C-band Synthetic Aperture Radar (C-SAR), this project assessed mouth state, inundation extent, turbidity, temperature, and tidal measurements for observable estuaries. The Normalized Water Difference Index from Sentinel-2 MSI captured estuary mouth state and inundation extent. Landsat 8 OLI and Sentinel-2 MSI detected differences in water quality metrics that correlated to changes in estuary mouth state (i.e., open or closed). The team’s California Estuary Assessment (CEA) tool in Google Earth Engine was successful in analyzing estuary mouth state, inundation, and water quality. It was most effective when breach events were larger than 10 meters in resolution, water surface was smooth, and imagery was unimpeded by algae or sun glint. The CEA tool will allow the partners, the Ocean Protection Council, Central Coast Wetlands Group, Southern California Coastal Water Research Project, and University of California Los Angeles (UCLA) and Davis (UCD), to better understand estuary dynamics and more effectively conduct in situ estuary monitoring.
Sarah Payne↗
Tidal and atmospheric forcing of the upper ocean in the Gulf of California. 2: Surface heat flux
Satellite infrared imagery and coastal meteorological data for March 1984 through February 1985 are used to estimate the net annual surface heat flux for the northern Gulf of California. The average annual surface heat flux for the area north of Guaymas and Santa Rosalia is estimated to be +74 W/sq m for the 1984-1985 time period. This is comparable to the +20-50 W/sq m previously obtained from heat and freshwater transport estimates made with hydrographic surveys from different years and months. The spatial distribution of the net surface heat flux shows a net gain of heat over the whole northern gulf. Except for a local maximum near San Esteban Island, the largest heat gain (+110-120 W/sq m) occurs in the Ballenas and Salsipuedes channels, where strong tidal mixing produces anomalously cold sea surface temperatures (SSTs) over much of the year. The lowest heat gain occurs in the Guayamas Basin (+40-50 W/sq m), where SSTs are consistently warmer. In the relatively shallow northern basin the net surface heat flux is farily uniform, with a net annual gain of approxmately +70 W/sq m. A local minimum in heat gain (approximately +60 W/sq m) is observed over the shelf in the northwest, where spring and summer surface temperatures are particularly high. A similar minimum in heat gain over the shelf was observed in a separate study in which historical SSTs and 7 years (1979-1986) of meteorological data from Puerto Penasco were used to estimate the net surface heat flux for the northern basin. In that study, however, the heat fluxes were higher, with a gain of +100 W/sq m over the shelf and +114 W/sq m in the northern basin. These larger values are directly attributable to the higher humidities in the 1979-1986 study compared to the 1984-1985 satellite study. High humidities reduce evaporation and the associated latent heat loss, promoting a net annual heat gain. In the norther Gulf of California, however, tidal mixing appears to play a key role in the observed gain of heat. Deep mixing in the island region produces a persistent pool of cold water which is mixed horizontally by the large-scale circulation, lowering surface temperatures over most of the northern gulf. These cold SSTs decrease evaporation by reducing the saturation vapor pressure of the overlying air. As a result, heat loss is substantially reduced, even when humidities are low. By removing heat from the surface, tidal mixing alters the time scale of air-sea interaction and reduces or possibly even inhibits the formation of deep water masses via convection.
Paden, Cynthia A.↗
Satellite observations of the Southern California Bight: circulation, seeps, and run-off
This study uses ERS-1/2 Synthetic Aperture Radar (SAR) and RADARSAT imagery, complemented by Advanced Very High Resolution Radiometer (AVHRR) and SeaWiFS satellite imagery plus in situ measurements to describe several features of the Souther California Bight.
coastal oceans SAR↗
(abstract) Seasonal Variability in Coastal Upwelling: A Comparison of Four Coastal Upwelling Sites from Space
Coastal upwelling of subsurface nutrient-rich water occurs along the eastern boundary of the ocean basins and leads to high primary production and fish catches. In this study satellite observations are used to compare the seasonal cycle in wind forcing and in the oceanic and biological response of the major coastal upwelling regions associated with the Canary, Benguela, California, and Humboldt Currents.
Current California Current Canary Current Benguela↗
Coastal California's Fog as a Unique Habitable Niche: Design for Autonomous Sampling and Preliminary Aerobiological Characterization
Just as on the land or in the ocean, atmospheric regions may be more or less hospitable to life. The aerobiosphere, or collection of living things in Earth's atmosphere, is poorly understood due to the small number and ad hoc nature of samples studied. However, we know viable airborne microbes play important roles, such as providing cloud condensation nuclei. Knowing the distribution of such microorganisms and how their activity can alter water, carbon, and other geochemical cycles is key to developing criteria for planetary habitability, particularly for potential habitats with wet atmospheres but little stable surface water. Coastal California has regular, dense fog known to play a major transport role in the local ecosystem. In addition to the significant local (1 km) geographical variation in typical fog, previous studies have found that changes in height above surface of as little as a few meters can yield significant differences in typical concentrations, populations and residence times. No single current sampling platform (ground-based impactors, towers, balloons, aircraft) is capable of accessing all of these regions of interest.A novel passive fog and cloud water sampler, consisting of a lightweight passive impactor suspended from autonomous aerial vehicles (UAVs), is being developed to allow 4D point sampling within a single fog bank, allowing closer study of small-scale (100 m) system dynamics. Fog and cloud droplet water samples from low-altitude aircraft flights in nearby coastal waters were collected and assayed to estimate the required sample volumes, flight times, and sensitivity thresholds of the system under design.125 cloud water samples were collected from 16 flights of the Center for Interdisciplinary Remotely Piloted Aircraft Studies (CIRPAS) instrumented Twin Otter, equipped with a sampling tube collector, occurring between 18 July and 12 August 2016 below 1 km altitude off the central coast. The collector was flushed first with 70 ethanol, then with sterile DI water, between sampling regions. Collected volumes ranged from 100 L to 12 mL. All samples were diluted serially and plated on two different types of agar, nutrient-dense (PCA) and sparse (R-2A). Plates were incubated at room temperature and counted when colonies first appeared and again at 2 weeks.Preliminary results from seven flights are consistent with generally reported colony-forming unit (CFU) values for terrestrial fog water (e.g., [4]). The PCA assay ranged from 400 to 125,000 CFU/mL, R-2A from 700 to 130,000 CFU/mL. PCA and R-2A counts were not significantly different from each other at I^ plus or minus +/- 0.05, although observationally, the R2A plates had more pigmented colonies. CFU counts from the majority of flights were not different from each other in mean at the same level of significance, but about half differed in median, indicating differences in underlying distribution. These results validate the presence of viable microorganisms in coastal California fog at levels that should be easily detectable by our sampling system. The indicated distribution differences underscore the need for small-scale, long-term sampling surveys. Future planned work includes ion chromatography for limiting nutrients, ATP quantification, and qPCR for several microbial classes of interest.
Coastal↗
Contribution of Phycoerythrin-Containing Phytoplankton to Remotely Sensed Signals in the Ocean
The purpose of this project was to evaluate the importance of phycoerythrin-containing phytoplankton, in particular coccoid cyanobacteria, to remote sensing. We proposed to estimate cyanobacteria abundance and pigmentation and their relationship to water-column optics. We have estimated the contribution of cyanobacteria to scattering and backscattering in both open ocean (Sargasso Sea) and coastal waters (western coast of North Atlantic and the California Current). Sampling and data processing is performed. Relationship between water column optics and phycoerythrin concentration and algorithms development are being carried out.
Vernet, Maria↗
Utilizing Remote Sensing to Detect and Assess the Impacts of Estuarine Breach Events for Improved Coastal Wetland Monitoring and Management
Estuaries are extremely dynamic environments that provide a host of vital ecosystem services. California’s Marine Life Protection Act protects such ecosystems by creating Marine Protected Areas (MPAs). California has approximately 440,000 acres of estuarine habitat as well as 23 Estuarine Marine Protected Areas (EMPAs). Thus, in situ data collection is often difficult due to time and resource constraints. This project used remote sensing to gather data that examined the health and dynamics of California EMPAs to supplement ground-based field measurements. Through the use of Landsat 8 Operational Land Imager (OLI) and Thermal Infrared Sensor (TIRS), Sentinel-2 MultiSpectral Instrument (MSI), and Sentinel-1 C-band Synthetic Aperture Radar (C-SAR), this project assessed mouth state, inundation extent, turbidity, temperature, and tidal measurements for observable estuaries. The Normalized Difference Water Index (NDWI) from Sentinel-2 MSI captured estuary mouth state and inundation extent. Landsat 8 OLI and Sentinel-2 MSI detected differences in water quality metrics that correlated to changes in estuary mouth state (i.e., open or closed) through algorithms in Google Earth Engine (GEE). The GEE California Estuary Assessment (CEA) tool was created with partner input throughout development and culminated in a graphical user interface tailored to management needs. The CEA tool will allow the partners, the Ocean Protection Council, Moss Landing Marine Laboratories’ Central Coast Wetlands Group, the Southern California Coastal Water Research Project, and University of California Los Angeles (UCLA) and Davis (UCD), to better understand estuary dynamics and facilitate informed management decisions through satellite-based Earth observations.
Alex Gunnerson↗
Continuous Remote Measurements of Atmospheric O2 Concentrations in Relation to Interannual Variations in Biological Production and Carbon Cycling in the Oceans
We successfully initiated a program to obtain continuous time series of atmospheric O2 concentrations at a semi-remote coastal site, in Trinidad, California. The installation, which was completed in September 1999, consists of a commercially-available O2 and CO2 analyzers interfaced to a custom gas handling system and housed in a dedicated building at the Trinidad site. Ultimately, the data from this site are expected to provide constraints, complementing satellite data, on variations in ocean productivity and carbon exchange on annual and interannual time scales, in the context of human-induced changes in global climate and other perturbations. The existing time-series, of limited duration, have been used in support of studies of the O2/CO2 exchange from a wild fire (which fortuitously occurred nearby in October 1999) and to quantify air-sea N2O and O2 exchanges related to coastal upwelling events. More generally, the project demonstrates the feasibility of obtaining semi-continuous O2 time series at moderate cost from strategic locations globally.
Keeling, Ralph F.↗
Relation between West Coastal rainfall and Nimbus 6 SCAMS liquid water data over the northeastern Pacific Ocean
A research study is described in which the application to rainfall prediction of cloud liquid water data obtained from the SCAMS experiment of Nimbus 6 is explored. The study area is the Pacific Northwest coast of the United States, where rainfall is produced by extratropical storms that approach from across the Pacific Ocean. SCAMS data related to cloud liquid water over the ocean, and coastal rainfall data, are analyzed for 20 different storm systems in the northeastern Pacific Ocean; these produced significant rainfall from Washington to central California during the period October 1975-March 1976. Results show that the distribution of storm-cloud water analyzed from the SCAMS data over the ocean foreshadows the distribution of coastal rainfall accumulated from the storm at a later time. It is concluded that passive microwave sensor measurements of cloud water over the ocean, when used in conjunction with numerical and other objective guidance, can be used to enhance the accuracy of predictions of coastal rainfall distribution. Limitations in the SCAMS measurements and in the data analysis and interpretation are noted.
Viezee, W.↗
Relation between west coastal rainfall and Nimbus-6 SCAMS liquid water data over the northeastern Pacific Ocean
The application to rainfall prediction of cloud liquid water data obtained from the SCAMS experiment of Nimbus-6 is explored. The study area is the Pacific Northwest coast of the United States, where rainfall is produced by extratropical storms that approach from across the Pacific Ocean. The SCAMS data related to cloud liquid water over the ocean, and coastal rainfall data, are analyzed for 20 different storm systems in the northeastern Pacific Ocean; these produced significant rainfall from Washington to central California during the period October 1975 through March 1976. Results show that the distribution of storm cloud water analyzed from the SCAMS data over the ocean foreshadows the distribution of coastal rainfall accumulated from the storm at a later time. It is concluded that passive microwave sensor measurements of cloud water over the ocean, when used in conjunction with numerical and other objective guidance, can be used to enhance the accuracy of predictions of coastal rainfall distribution. Limitations in the SCAMS measurements and in the data analysis and interpretation are noted.
Viezee, W.↗