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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 19 records
All sourcesNASA NTRSDOE OSTI
DOE OSTI2021

Activation of the CaR-CSE/H2S pathway confers cardioprotection against ischemia-reperfusion injury

Ischemia-reperfusion (I/R) injury is a multifactorial process triggered when an organ is subjected to transiently reduced blood supply. The result is a cascade of pathological complications and organ damage due to the production of reactive oxygen species following reperfusion. The present study aims to evaluate the role of activated calcium-sensing receptor (CaR)-cystathionine γ-lyase (CSE)/hydrogen sulfide (H2S) pathway in I/R injury. Firstly, an I/R rat model with CSE knockout was constructed. Transthoracic echocardiography, TTC and HE staining were performed to determine the cardiac function of rats following I/R Injury, followed by TUNEL staining observation on apoptosis. Besides, with the attempt to better elucidate how CaR-CSE/H2S affects I/R, in-vitro culture of human coronary artery endothelial cells (HCAECs) was conducted with gadolinium chloride (GdCl3, a CaR agonist), H{sub 2}O{sub 2}, siRNA against CSE (siCSE), or W7 (a CaM inhibitor). The interaction between CSE and CaM was subsequently detected. Plasma oxidative stress indexes, H2S and CSE, and apoptosis-related proteins were all analyzed following cell apoptosis. We found that H2S elevation led to the improvement whereas CSE knockdown decreased cardiac function in rats with I/R injury. Moreover, oxidative stress injury in I/R rats with CSE knockout was aggravated, while the increased expression of H2S and CSE in the aortic tissues resulted in alleviated the oxidative stress injury. Moreover, increased H2S and CSE levels were found to inhibit cell apoptotic ability in the aortic tissues after I/R injury, thus attenuating oxidative stress injury, accompanied by inhibited expression of apoptosis-related proteins. In HCAECs following oxidative stress treatment, siCSE and CaM inhibitor were observed to reverse the protection of CaR agonist. Coimmunoprecipitation assay revealed the interaction between CSE and CaM. Taken together, all above-mentioned data provides evidence that activation of the CaR-CSE/H2S pathway may confer a potent protective effect in cardiac I/R injury.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2020

Materials Data on CSe(ClF)3 by Materials Project

CSe(ClF)3 crystallizes in the orthorhombic Pbca space group. The structure is zero-dimensional and consists of eight CSe(ClF)3 clusters. there are two inequivalent C2+ sites. In the first C2+ site, C2+ is bonded in a trigonal non-coplanar geometry to three F1- atoms. There is one shorter (1.33 Å) and two longer (1.34 Å) C–F bond length. In the second C2+ site, C2+ is bonded in a trigonal non-coplanar geometry to three F1- atoms. There is one shorter (1.33 Å) and two longer (1.34 Å) C–F bond length. There are two inequivalent Se4+ sites. In the first Se4+ site, Se4+ is bonded in a rectangular see-saw-like geometry to four Cl1- atoms. There are a spread of Se–Cl bond distances ranging from 2.22–2.71 Å. In the second Se4+ site, Se4+ is bonded in a rectangular see-saw-like geometry to four Cl1- atoms. There are a spread of Se–Cl bond distances ranging from 2.25–2.64 Å. There are six inequivalent Cl1- sites. In the first Cl1- site, Cl1- is bonded in a single-bond geometry to one Se4+ atom. In the second Cl1- site, Cl1- is bonded in a distorted single-bond geometry to one Se4+ atom. In the third Cl1- site, Cl1- is bonded in a distorted single-bond geometry to one Se4+ atom. In the fourth Cl1- site, Cl1- is bonded in a 2-coordinate geometry to two Se4+ and two F1- atoms. Both Cl–F bond lengths are 3.10 Å. In the fifth Cl1- site, Cl1- is bonded in a 1-coordinate geometry to one Se4+ atom. In the sixth Cl1- site, Cl1- is bonded in a 2-coordinate geometry to two Se4+ and two F1- atoms. There are one shorter (3.09 Å) and one longer (3.10 Å) Cl–F bond lengths. There are six inequivalent F1- sites. In the first F1- site, F1- is bonded in a single-bond geometry to one C2+ and one Cl1- atom. In the second F1- site, F1- is bonded in a single-bond geometry to one C2+ and one Cl1- atom. In the third F1- site, F1- is bonded in a single-bond geometry to one C2+ and one Cl1- atom. In the fourth F1- site, F1- is bonded in a single-bond geometry to one C2+ atom. In the fifth F1- site, F1- is bonded in a single-bond geometry to one C2+ atom. In the sixth F1- site, F1- is bonded in a single-bond geometry to one C2+ and one Cl1- atom.

36 MATERIALS SCIENCE↗
DOE OSTI2020

Materials Data on CsAsH6(CSe)2 by Materials Project

CsAsH6(CSe)2 crystallizes in the monoclinic C2/c space group. The structure is three-dimensional. Cs1+ is bonded in a 6-coordinate geometry to six equivalent Se2- atoms. There are a spread of Cs–Se bond distances ranging from 3.73–3.80 Å. C is bonded to one As3- and three H1+ atoms to form distorted corner-sharing CAsH3 tetrahedra. The C–As bond length is 1.97 Å. All C–H bond lengths are 1.10 Å. As3- is bonded in a tetrahedral geometry to two equivalent C and two equivalent Se2- atoms. Both As–Se bond lengths are 2.31 Å. There are three inequivalent H1+ sites. In the first H1+ site, H1+ is bonded in a single-bond geometry to one C atom. In the second H1+ site, H1+ is bonded in a single-bond geometry to one C atom. In the third H1+ site, H1+ is bonded in a single-bond geometry to one C atom. Se2- is bonded in a distorted single-bond geometry to three equivalent Cs1+ and one As3- atom.

36 MATERIALS SCIENCE↗
DOE OSTI2025

SIAM CSE 2025 presentation

Explore the source record for details and available documents.

McQuarrie, Shane Alexander [Sandia National Labora↗
DOE OSTI2019

Measurement of spleen fat on MRI-proton density fat fraction arises from reconstruction of noise

Purpose: This study compares splenic proton density fat fraction (PDFF) measured using confounder-corrected chemical shift-encoded (CSE)-MRI to magnetic resonance spectroscopy (MRS) in human patients at 3T. Methods: This was a prospectively designed ancillary study to various previously described single-center studies performed in adults and children with known or suspected nonalcoholic fatty liver disease. Patients underwent magnitude-based MRI (MRI-M), complex-based MRI (MRI-C), high signal-to-noise variants (Hi-SNR MRI-M and Hi-SNR MRI-C), and MRS at 3T for spleen PDFF estimation. PDFF from CSE-MRI methods were compared to MRS-PDFF using Wilcoxon signed-rank tests. Demographics were summarized descriptively. Spearman’s rank correlations were computed pairwise between CSE-MRI methods. Individual patient measurements were plotted for qualitative assessment. A significance level of 0.05 was used. Results: Forty-seven patients (20 female, 27 male) including 12 adults (median 55 years old) and 35 children (median 12 years old). Median PDFF estimated by MRS, MRI-M, Hi-SNR MRI-M, MRI-C, and Hi-SNR MRI-C was 1.0, 2.3, 1.9, 2.2, and 2.0%. The four CSE-MRI methods estimated statistically significant higher spleen PDFF values compared to MRS (p < 0.0001 for all). Pairwise associations in spleen PDFF values measured by different CSE-MRI methods were weak, with the highest Spearman’s rank correlations being 0.295 between MRI-M and Hi-SNR MRI-M; none were significant after correction for multiple comparisons. No qualitative relationship was observed between PDFF measurements among the various methods. Conclusion: Overestimation of PDFF by CSE-MRI compared to MRS and poor agreement between related CSE-MRI methods suggest that non-zero PDFF values in human spleen are artifactual.

62 RADIOLOGY AND NUCLEAR MEDICINE↗
DOE OSTI2020

The Corrective Maintenance Paradigm Shift at Hanford's Tank Farms - 20077

Hanford's Tank Farms facilities have been used to safely store waste for over 70 years, with the first single-shell tanks being constructed in 1943. Tank Farm facilities consist of 149 single-shell tanks, 28 double-shell tanks, an evaporator facility, and wastewater treatment facilities. Tank Farm facilities are aging, with a tremendous corrective maintenance burden on the Tank Farm contractor. The mission of Tank Farm facilities is soon changing from waste storage to waste staging for the Hanford Waste Treatment and Immobilization Plant (WTP). WTP operations will demand a significant increase in Tank Farm facility operations, in which corrective maintenance outage windows will shrink drastically. This realization has forced the Tank Farm contractor to consider a paradigm shift in Tank Farm facilities Maintenance planning, and the use of reliability Engineering tools. The Tank Farm Production Operations Engineering Cognizant System Engineering (CSE) organization has led the way in motivating this paradigm shift. This shift has been realized through the use of: 1) technical exchange with other Department of Energy (DOE) contractors to develop improvements in the CSE program, 2) a shift from the use of lagging to leading system health indicators, and 3) a Plant Health Committee to unite Engineering, Operations, and Maintenance personnel toward a productive maintenance strategy. The CSE organization has held several technical exchanges with other DOE contractors to discuss CSE concepts, and how to better maintain aging infrastructure. The technical exchange with other contractors has greatly reduced the time required to make improvements in the Tank Farm CSE program. Other DOE contractors have already faced issues surrounding aging infrastructure, and have vast experience in improving the reliability and usable life of structures and components in nuclear facilities. The past CSE program used lagging health indicators to determine the health of systems. The key lagging indicator used to determine system health was availability, which is the percentage of time that a facility was ready for operation compared to the time the facility was demanded for operation. Availability was a good indicator of health in the waste storage mission of Tank Farms, where safe storage was the most important function of the facility, and where maintenance outage windows were typically long-duration. In current and future operations, outage windows are reducing, resulting in the need for much more reliable systems. Systems that have had high availability may suddenly become inoperable due to a failed component or sub-system. In several instances, the use of availability as an indicator of system health failed to predict system/equipment failure before its occurrence. In discussions with other DOE contractors, a set of reliability tools, including leading indicators of health, has been implemented in the CSE program. This primarily involves the use of failure modes and effects analysis and the study of equipment failure to develop system monitoring plans that focus on trending data to detect oncoming equipment failure ahead of time. In addition, the use of a Plant Health Committee has added significantly to the paradigm shift from a corrective maintenance philosophy to the use of predictive and preventive maintenance. The Plant Health Committee is a chartered team consisting of Engineering, Operations, and Maintenance personnel. CSEs use this forum to present the results of their performance monitoring, including the presentation of health via leading health indicators. The most positive aspect of this committee is the communication that it creates within these critical organizations. The Operations and Maintenance organization benefit from focusing maintenance on the reliability-centered focus provided by Engineering. Engineering benefits from the operational experience of the Operations organization and from the failure data that can be provided by Maintenance personnel. The continued use of the Plant Health Committee is expected to further decrease maintenance outage times, in better support of oncoming 24/7 operations. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗
DOE OSTI2019

The modeling of the turbulent reaction rate under high-pressure conditions: A priori evaluation of the Conditional Source-term Estimation concept

With the goal of obtaining an accurate model of the turbulent reaction rate for Large Eddy Simulations (LESs), the modeling of turbulence-chemistry-thermodynamic interaction is addressed through an a priori study of a Direct Numerical Simulation (DNS) database representing high-pressure turbulent combustion. The DNS database consists of simulations of a temporal mixing layer in which a single-step chemical reaction occurs. The potential of the single-conditioned Conditional Source-term Estimation (CSE) approach to model the filtered turbulent reaction rate needed for conducting LES is examined. Evaluations conducted with the mixture fraction as a conditioning variable at two filter widths and with the probability density function (PDF) extracted from the DNS database that represents the mixture fraction, show that the deviation between the model and template is large and substantially increases with filter width. To address this deviation, the Double-conditioned CSE (DCSE) approach is explored with two different second conditioning variables, the first conditioning variable still being the mixture fraction; four filter widths are considered. The first choice of the second conditioning variable is a normalized progress variable based on the CO 2 mass fraction and the second choice of the second conditioning variable is a normalized temperature. With each second conditional variable, the DCSE results represent a substantial improvement over CSE, by as much as an order of magnitude when measured by the relative error from the DNS-extracted filtered reaction rate. A quantitative test based on a root mean square identifies the reason for the DCSE success compared to CSE: unlike in CSE, the DCSE is able to substantially reduce the fluctuations of the modeled reaction rate from the filtered reaction rate over the entire range of the filtered reaction rate values, and particularly at the larger reaction rate values for which the DCSE model has higher fidelity. The results are shown to be equally favorable for the two conditioning variables. Consideration of DNS realizations at higher free-stream pressure or larger Reynolds number shows that the results are essentially equally successful at other pressure or Reynolds number values.

42 ENGINEERING↗
DOE OSTI2022

Hard color-singlet exchange in dijet events in proton-proton collisions at $\sqrt{s} = 13$ TeV

We present a measurement of events with two jets separated by a pseudorapidity gap (jet-gap-jet). The signature is expected from hard color-singlet exchange. The jets are reconstructed with the CMS detector. The highest p_\text{T} p T jets have p_\text{T}^\text{jet1,2} > 40 p T jet1,2 > 40 GeV, with 1.4 < |\eta^\text{jet1,2}| < 4.7 1.4 < | η jet1,2 | < 4.7 and \eta^\text{jet1} \eta^\text{jet2} < 0 η jet1 η jet2 < 0 . We measure the fraction of color-singlet exchange dijet events, f_\text{CSE} f CSE , and compare it to previous measurements and to predictions. We also study jet-gap-jet events where the colliding protons remain intact and are detected with the Roman pots of TOTEM. A larger fraction f_\text{CSE} f CSE is found in the latter subsample.

Baldenegro Barrera, Cristian↗
NASA NTRS1987

The effects of chromospheric radiation on the circumstellar chemistry of evolved stars

Astrophysical situations are discussed in which radiation sources other than interstellar are important, and the atomic abundances of the Alpha Ori circumstellar envelope (CSE) are related to the chromospheric and interstellar radiation fields, and to the temperature distribution. The most common Alpha Ori CSE species are neutral atoms and first ions, and the electron fraction is high throughout the entire CSE. A peak in the neutral abundances in the outer CSE appears close to where the chromospheric and interstellar radiation fields are equal. The present theory predicts that the slope of the K I density should change from about -1.5 to -3.5 in the outer envelope, with the mass loss rate implied by this K I density being of the order of 4 x 10 to the -6th solar masses/yr.

Glassgold, A. E.↗
DOE OSTI2021

CRISPR-Cas9 editing of CAFFEOYL SHIKIMATE ESTERASE 1 and 2 shows their importance and partial redundancy in lignification in Populus tremula × P. alba

Lignins are cell wall-located aromatic polymers that provide strength and hydrophobicity to woody tissues. Lignin monomers are synthesized via the phenylpropanoid pathway, wherein CAFFEOYL SHIKIMATE ESTERASE (CSE) converts caffeoyl shikimate into caffeic acid. Here, we explored the role of the two CSE homologs in poplar (Populus tremula × P. alba). Reporter lines showed that the expression conferred by both CSE1 and CSE2 promoters is similar. CRISPR-Cas9-generated cse1 and cse2 single mutants had a wild-type lignin level. Nevertheless, CSE1 and CSE2 are not completely redundant, as both single mutants accumulated caffeoyl shikimate. In contrast, the cse1 cse2 double mutants had a 35% reduction in lignin and associated growth penalty. The reduced-lignin content translated into a fourfold increase in cellulose-to-glucose conversion upon limited saccharification. Phenolic profiling of the double mutants revealed large metabolic shifts, including an accumulation of p-coumaroyl, 5-hydroxyferuloyl, feruloyl and sinapoyl shikimate, in addition to caffeoyl shikimate. This indicates that the CSEs have a broad substrate specificity, which was confirmed by in vitro enzyme kinetics. Taken together, our results suggest an alternative path within the phenylpropanoid pathway at the level of the hydroxycinnamoyl-shikimates, and show that CSE is a promising target to improve plants for the biorefinery.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

DevOps Pragmatic Practices and Potential Perils in Scientific Software Development

The DevOps movement, which aims to accelerate the continuous delivery of high-quality software, has taken a leading role in reshaping the software industry. Likewise, there is growing interest in applying DevOps tools and practices in the domains of computational science and engineering (CSE) to meet the ever-growing demand for scalable simulation and analysis. Translating insights from industry to research computing, however, remains an ongoing challenge; DevOps for science and engineering demands adaptation and innovation in those tools and practices. There is a need to better understand the challenges faced by DevOps practitioners in CSE contexts in bridging this divide. To that end, we conducted a participatory action research study to collect and analyze the experiences of DevOps practitioners at a major US national laboratory through the use of storytelling techniques. We share lessons learned and present opportunities for future investigation into DevOps practice in the CSE domain.

97 MATHEMATICS AND COMPUTING↗