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At least 1,765 records · Page 98

PDF Entity Annotation Tool (PEAT)

While different text mining approaches – including the use of Artificial Intelligence (AI) and other machine based methods - continue to expand at a rapid pace, the tools used by researchers to create the labeled datasets required for training, modeling, and evaluation remain rudimentary. Labeled datasets contain the target attributes the machine is going to learn; for example, training an algorithm to delineate between images of a car or truck would generally require a set of images with a quantitative description of the underlying features of each vehicle type. Development of labeled textual data that can be used to build natural language machine learning models for scientific literature is not currently integrated into existing manual workflows used by domain experts. Published literature is rich with important information, such as different types of embedded text, plots, and tables that can all be used as inputs to train ML/natural language processing (NLP) models, when extracted and prepared in machine readable formats. Currently, both normalized data extraction of use to domain experts and extraction to support development of ML/NLP models are labor intensive and cumbersome manual processes. Automatic extraction of data and information from formats such as PDFs that are optimized for layout and human readability, not machine readability. The PDF (Portable Document Format) Entity Annotation Tool (PEAT) was developed with the goal of allowing users to annotate publications within their current print format, while also allowing those annotations to be captured in a machine-readable format. One of the main issues with traditional annotation tools is that they require transforming the PDF into plain text to facilitate the annotation process. While doing so lessens the technical challenges of annotating data, the user loses all structure and provenance that was inherent in the underlying PDF. Also, textual data extraction from PDFs can be an error prone process. Challenges include identifying sequential blocks of text and a multitude of document formats (multiple columns, font encodings, etc.). As a result of these challenges, using existing tools for development of NLP/ML models directly from PDFs is difficult because the generated outputs are not interoperable. We created a system that allows annotations to be completed on the original PDF document structure, with no plain text extraction. The result is an application that allows for easier and more accurate annotations. In addition, by including a feature that grants the user the ability to easily create a schema, we have developed a system that can be used to annotate text for different domain-centric schemas of relevance to subject matter experts. Different knowledge domains require distinct schemas and annotation tags to support machine learning.

97 MATHEMATICS AND COMPUTING↗

libEnsemble: A complete Python toolkit for dynamic ensembles of calculations

Almost all science and engineering applications eventually stop scaling: their runtime no longer decreases as available computational resources increase. Therefore, many applications will struggle to efficiently use emerging extreme-scale high-performance, parallel, and distributed systems. libEnsemble is a complete Python toolkit and workflow system for intelligently driving ensembles of experiments or simulations at massive scales. It enables and encourages multidisciplinary design, decision, and inference studies portably running on laptops, clusters, and supercomputers.

97 MATHEMATICS AND COMPUTING↗

Fiats: Functional inference and training for surrogates

Fiats provides a platform for research on the training and deployment of neural-network surrogate models for computational science. Fiats also supports exploring, advancing, and combining functional, object-oriented, and parallel programming patterns in Fortran 2023. As such, the Fiats name has dual expansions: “Functional Inference And Training for Surrogates” or “Fortran Inference And Training for Science.” Fiats inference and training procedures are pure and therefore satisfy a language constraint imposed on procedure invocations inside Fortran’s parallel loop construct: do concurrent. Furthermore, the Fiats training procedures are built around a do concurrent parallel reduction. Several compilers can automatically parallelize do concurrent on Central Processing Units (CPUs) or Graphics Processing Units (GPUs). Fiats thus aims to achieve performance portability through standard language mechanisms.

Rouson, Damian [Lawrence Berkeley National Laborat↗

The Next-Generation Ecosystem Experiment Arctic Rainfall Simulator: a tool to understand the effects of changing rainfall patterns in the Arctic

Rainfall frequency and intensity are expected to increase in the Arctic, with potential detrimental impacts on permafrost, leading to enhanced thawing and carbon release to the atmosphere. However, there have been very few studies on the effect of discrete rain events on permafrost in the Arctic and sub-Arctic. Conducting controlled rainfall experiments within permafrost landscapes can provide an improved understanding of the effect of changing intensity, duration, and timing of rain events on permafrost tundra ecosystems. Here, we describe the design and implementation of the Next-Generation Ecosystem Experiment Arctic Rainfall Simulator (NARS), a variable intensity (4–82 mm/h) rainfall simulator that can be used to study the effects of rainfall on permafrost stability. The NARS design includes a 3D-printed 4 cm H-flume and uses an eTape resistivity sensor that was calibrated (R 2 = 0.9–0.96) to measure discharge from the system. NARS is designed to be lightweight, simple to construct, and can be easily deployed in remote locations. As a field validation of updated rainfall simulator design and modernized controls, NARS was tested on the Seward Peninsula, AK. Because of its portability, versatility in deployment, dimensions, and rainfall intensity, NARS represents a methodological innovation for researching the impacts of rainfall on permafrost environments.

54 ENVIRONMENTAL SCIENCES↗

Parallelization of a Proxy Transport App Using ComputeCPP and SYCL

This document details the attempts to parallelize a multi-group Monte Carlo proxy app using SYCL and the ComputeCPP Community Edition compiler. SYCL is a standard set by the Khronos Group and is described as a, “cross-platform abstraction layer that builds on the underlying concepts, portability and efficiency of OpenCL that enables code for heterogeneous processors to be written in a “single-source” style using completely standard C++.” ComputeCpp Community Edition (CE) is a heterogeneous parallel programming platform that provides a conformant implementation of the SYCL™ 1.2.1 Khronos specification. ComputeCPP provides a compiler and an SDK containing a build system to improve the usability of the compiler. The supported OpenCL 1.2 platforms for ComputeCpp are AMD® and Intel®, with experimental support for PTX which is used on Nvidia graphics cards as well as experimental support for ARM chips. All testing reported in this document was done on the Darwin computer cluster using an Nvidia GTX Titan X graphics card. Since ComputeCPP does not support using this card with OpenCL, ComputeCPP’s experimental PTX64 bit-code generation was used to generate device code.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

SYCL for Monte Carlo Transport [Slides]

SYCL is a cross-platform abstraction layer that builds on the underlying concepts, portability and efficiency of OpenCL that enables code for heterogeneous processors to be written in a “single-source” style using completely standard C++.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Compact X-Ray Systems [Slides]

X-ray technology has changed very little since its discovery over a century ago. LANL develops low-cost, man-portable, systems with markets in: cargo inspection, weld inspection, field medicine, veterinary medicine, and EOD work.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Canberra Falcon 5000 Job-Aid

The Falcon 5000 is a portable, mechanically-cooled, coaxial HPGe gamma-ray detector. Its high resolution and efficiency over a wide energy range make it wellsuited for nuclide identification, plutonium isotopic composition analysis, and prompt gamma analysis.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

ORTEC Detective DX/EX-100

The Detective is a portable, mechanically-cooled, coaxial HPGe gamma-ray detector. Its reasonable high resolution and efficiency over a wide energy range make it well-suited for nuclide identification and isotopic composition analysis.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Converting the MCNP Runtape to HDF5

The current runtape in MCNP is a Fortran unformatted IO dump of approximately 800 variables used for restarting an MCNP simulation. This format has a number of technical issues for those who interact with it. First, Fortran unformatted IO is not guaranteed to be portable. As a result, a runtape generated on one machine is not necessarily readable on another. Second, for users who wish to extract data from the runtape, there is no simple approach. It is impossible to extract one variable without knowing the size and position of every other one. Finally, the runtape itself is not backwards compatible such that a future version of MCNP could open it. Users are expected to keep around versions of MCNP that are compatible with saved runtapes.

97 MATHEMATICS AND COMPUTING↗

FY19 L2 MRT 6744 Milestone Completion: Digital Time-Resolved Spot Diagnostic (D-TRSD)

This milestone report describes development of the Digital Time-Resolved Spot Diagnostic (D-TRSD) into a functioning diagnostic that has been proven in the laboratory. Laboratory tests complete the MRT 6744 exit criteria with the recording and analysis of a spot size measurement for two consecutive pulses on a two-pulse source. Additional channels will be added in the near future to provide an 84-channel measurement capability. The new modular design is more portable than the previous generations and will be much easier to set up at radiographic facilities across the complex.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Dose Modeling for Harborview Research and Training Facility

The Harborview Research and Training (R&T) Facility at the University of Washington (UW) was accidently contaminated from a breached sealed source of Cesium-137. The release occurred during removal of the sealed source from its holder within a portable hot cell in the loading dock area near room 220. The loading dock and northeast corner of the building above the ground floor were impacted by the release, whereas the remaining portions of the R&T Facility were minimally affected. Detailed descriptions of the R&T Facility and the affected area/rooms are included in Section 2. The RESRAD Team in the Environmental Science Division of Argonne National Laboratory visited the site on August 12, 2019, and interviewed the R&T Facility building manager and staff working in the building at that time. Site- and building-specific data were collected including building floor plan CAD drawings, building occupants’ working hours, contaminated rooms photos and their dimensions, building air exchange rates, building materials and “curtain wall” details, and so forth. These data are being used in the dose modeling for potential occupants of the building after it is remediated. The dose modeling was performed using the RESRAD-BUILD computer code, which is designed for the evaluation of radiologically contaminated buildings (Yu et al. 2003). Two hypothetical building occupants of the Harborview R&T Facility were evaluated: a researcher occupying room 726 (a research laboratory on the seventh floor) and a custodian occupying room 220 (loading dock and trash compactor room with a rollup door). A maintenance worker that will be spending less time in impacted areas was not modeled because it will be bounded by other two hypothetical building occupants modeled. A summary description of the RESRAD-BUILD is provided in Appendix A, and the modeling of potential doses to a researcher and a custodian is described in detail in Section 3. A summary and a discussion of the dose modeling results are included in Section 4. The parameters used in the RESRAD-BUILD modeling are included in Appendix B. This report documents the dose modeling results; it does not describe measurements of the actual radioactivity levels at the Harborview R&T Facility, nor does it set any expectation for the actual final radioactivity levels. The radiation doses presented are modeling results based on the generic screening values of Cs-137 and several conservative assumptions and are meant only to assist in decision making regarding decontamination of the Harborview R&T Facility.

61 RADIATION PROTECTION AND DOSIMETRY↗

NEAMS Workbench and Bison Fuel Performance Remote Application Configuration

The mission of the US Department of Energy (DOE) Nuclear Energy Advanced Modeling and Simulation (NEAMS) Program is to develop, apply, deploy, and support state-of-the-art predictive modeling and simulation tools for the design and analysis of current and future nuclear energy systems. This is accomplished using computing architectures that range from laptops to leadership class facilities. The NEAMS Workbench [1,2,3] initiative will facilitate the transition from conventional computer codes to high-fidelity ones by providing a common analysis environment and interface for model creation, review, execution, output review, and visualization for integrated codes. The BISON fuel performance code [4] is a finite element method (FEM)-based software being developed by multiple organizations led by the Idaho National Laboratory for the US Department of Energy Office of Nuclear Energy. BISON can simulate a variety of fuel and cladding compositions and geometries in varying dimensionalities, depending upon the problem type and complexity, including one-dimensional (1D), 1.5D, 2D axially symmetric (2D-rz), 2D radial-azimuthal (2D-rθ), or 3D models. The NEAMS Workbench allows execution of the BISON fuel performance code on local and remote compute resources. In this report, the detailed instructions of configuring the NEAMS Workbench for remote execution of the BISON fuel performance code on a portable batch system (PBS)-scheduled compute resource, as well the transfer of associated Bison files, is illustrated.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

University of Washington Harborview Research and Training Building Environmental Sample Plan for Cs-137 in Soils and Sediments

On May 2, 2019, a release of Cs-137 from a breached sealed source containing 2,800 curies (Ci) (1E14 Bq) of Cesium-137 (Cs-137) occurred at the University of Washington (UW) Harborview Research and Training Building (HRB). The release occurred during removal of the source from its holder within a portable hot cell in the second floor loading dock area. The loading dock and northeast corner of the building above the ground floor were heavily impacted by the release, while the remaining portions of the building and the exterior of the building were minimally impacted.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

l3d2vtk: An MCNPTools Utility to Enable LNK3DNT File Visualization & Post-processing [Slides]

This presentation discusses the objective of the project which is to provide a utility (among other utilities) that improves MCNP analysis post-processing and visualization capabilities. Much recent work has been done to improve MCNP post-processing and visualization. It also discusses the goals of the project, which are to create a product that is portable, open, easily interrogated by a user, no dependencies, including a mesh tally-to-VTK conversion, an EEOUT-to-VTK conversion, and an interactive, 3-D, visualization environments (e.g., ParaView). The presentation also discusses the reasons regarding why this is being done, which are to provide physical insight into behaviors and trends, to facilitate error mitigation (easier to “see” errors than “read” them), and to improve communication with collaborators. It also discusses why this is being done now as analyses are getting ever-more complicated and are more flexible in terms of build, test, and deployment capabilities.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Large Area Airborne Contamination Monitoring

Current D&D operations at Hanford have demonstrated a flaw in the current state of the art capability of defining airborne contamination boundaries. Airborne particulate emissions of Pu-239 from CM2H operations on the Hanford Pu Finishing Plant were detected well beyond areas controlled for airborne plutonium, putting numerous workers at risk for radiological assimilations. Forty-two Hanford workers had positive bioassay results for plutonium uptake. Work areas determined to be free of airborne contamination as measured by state-of-the-art continuous alpha monitoring (CAM) systems were later discovered not to be. Airborne contamination was scattered to a such degree that CAM systems were surveying insufficient volumes of air to accurately predict where respiratory protection was required. A $\$ 19,000$ state of the art portable CAM system used at both Hanford and at SRS screens air for alpha activity at the rate of 1 CFM. This research project will explore the feasibility of using commercially available air purifying systems to screen significantly larger volumes of air for airborne actinide contamination. Commercial household HEPA based air purifying units screen large volumes of air, a simple $\$ 300$ unit being looked at for this study could screen a volume of air that would require over 300 of the $\$ 19,000$ CAMs. The goal of the project was to determine the feasibility of building a detection system capable of screening the air purifiers pre-filters and HEPA filters for any actinide bearing hot particles that have been captured. The simplest technologies available to Field-Radiological-Protection personnel are hand-held alpha field survey meters. With the size and the corrugated structure of these HEPA filters, hand screening is not practical. This project researched alternatives capable of automating this function. Two potential technologies were examined. One technology evaluated was the measurement of xray emissions from the actinides, taking advantage of the higher emission rates of the L x-rays compared to the gamma emissions of isotopes such as Pu-238 or Pu-239. High resolution to low resolution systems were evaluated. Branching ratio data on the actinides in the literature is incomplete, and a study was initiated to measure branching ratios of the various L emissions of a number of the plutonium isotopes. A Monte Carlo simulation was also run to calculate the effect the attenuating HEPA media would have on x-ray measurements on spectrometers centered in each quadrant above the surface of the HEPA. The second technology evaluated was measuring the light from a scintillating media applied to the surface of the HEPA filter using a ThorLabs Scientific-Grade Digital Camera Model 8051M. A light tight enclosure capable of holding the 2’x2’x1” HEPA filter was fabricated. Numerous scintillation media were evaluated for both the sensitivity and for resolution of measuring alpha activity. Figure 1 shows images of a 4”x4” section of HEPA filter with a 3 x 3 grid of Pu-238 contamination loaded inside the crevices of the HEPA.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

AOI2 - Initial Engineering, Testing, and Design of a Commercial-Scale Postcombustion CO 2 Capture System on an Existing Coal-Fired Generating Unit (Project Carbon)

The continued long-term use of North Dakota lignite is likely dependent on creating a business case for carbon capture, utilization, and storage (CCUS) that also addresses society’s desire to reduce carbon emissions. CCUS coupled with enhanced oil recovery appears to be the most feasible option for utilities to sustain and grow the lignite industry. Establishing a market where lignite-powered utilities provide carbon dioxide (CO 2 ) to oil producers depends upon having a cost-effective method to capture CO 2 . The application of CO 2 capture technology to lignite-fired flue gas has challenges in addition to the cost of capture, including the effects of the buildup of heat-stable salts, aerosol formation, degradation of solvents or solid sorbents, or subsequent solvent loss. Lignite, especially North Dakota lignite, presents its own set of challenges that include the combination of high sodium, sulfur, and ash contents; NO x reduction; and footprint limitations. Project Carbon was designed to address these technical barriers and provide pre-FEED (preliminary front-end engineering and design) information necessary for additional commercial demonstrations to move forward. A long-term pilot-scale evaluation of Mitsubishi Heavy Industries’ (MHI’s) KS-1™ solvent at Minnkota Power Cooperative’s lignite-fired Milton R. Young Station Unit 2 (MRY2) was a major objective of the project. The purpose of the test was to demonstrate the technology’s compatibility with MRY2’s flue gas over an extended period of time. During the long-term test, aerosol sampling and measurement were performed, and a pilot-scale baghouse was tested to determine the effect of bag material and operation on aerosol concentrations in the flue gas. Project engineering and design work were performed to support the other major project objective: a pre-FEED study of CO 2 capture at MRY2. Finally, a techno-economic assessment (TEA) of the application of CO 2 capture to MRY2 was performed. This project was performed over a period of 28 months, with a total budget of $12,700,000. The U.S. Department of Energy’s (DOE’s) National Energy Technology Laboratory, through the Energy & Environmental Research Center’s (EERC’s) Cooperative Agreement, the North Dakota Industrial Commission, and industry partners ALLETE and Minnkota Power Cooperative, funded the project. The pilot-scale test system at MRY2 performed very well for the continuous test period of 83 days. The CO 2 capture plant achieved stable operation while utilizing MHI’s KS-1™ solvent and the MHI amine emission reduction unit. No major concerns were encountered when capturing CO 2 from lignite-fired flue gas. Challenges were encountered because the cooling water temperature was warmer than needed for the capture system to operate efficiently. This affected the ability of the solvent to capture CO 2 and promoted solvent loss through solvent entrainment caused by high CO 2 gas temperature within a cyclone separator. The KS-1™ solvent and the lignite-derived flue gas were analyzed during the long-term test. Analysis of the solvent indicates that, although some metals and heat-stable salts increased over the course of the long-term test, they were at levels that can be treated with filtration and reclaiming and do not pose a concern for effective solvent operation. Fourier transform infrared (FTIR) spectrometry was successfully used to determine the composition of the lignite-derived flue gas as well as concentrations of select components of the flue gas at various locations within the EERC’s CO 2 capture system. The formation of aerosols during the capture process is of interest, as are approaches for their reduction, especially in a baghouse. Testing of aerosol removal was performed using the EERC’s portable baghouse. It was found that both Ryton and polytetrafluoroethylene (PTFE) membrane bags were effective at reducing the level of aerosols during steady-state operation. During backpulse events, however, the amount of aerosols passing through the bags was an order of magnitude lower for the Ryton bags than the PTFE membrane bags. The testing showed that proper design of the baghouse air-to-cloth ratio as well as minimization of backpulsing can dramatically reduce the amount of aerosols that pass through the bags and remain in the flue gas stream exiting a baghouse system. A technology maturation plan (TMP) was performed to enable successful development of the Kansai Mitsubishi Carbon Dioxide Recovery® (KM CDR®) Process for application to a combustion flue gas for which the process has not yet been demonstrated. In the TMP, new challenges to the MHI CO 2 capture technology during its application to MRY2 were identified. These challenges included capture from lignite-fired (as opposed to subbituminous coal-fired) flue gas, a larger scope than previous applications of the technology, and implementation in a colder climate that could affect process and equipment operability. Because MRY2 is located where stack icing in the winter could be problematic, a rime icing study was performed. Rime icing modeling indicated that, under both 100% and 50% operating loads, there is a potential for many icing events during any given part of the year in which below-freezing weather conditions exist. The models showed that a critical amount of rime ice could be formed at the stack top during two or more events per year. CO 2 capture plant stack height and location will need to be determined in order to minimize the formation of rime ice. It was found that the integration of the MHI CO 2 capture process into the normal operation of the MRY2 steam turbine is a viable alternative to a cogeneration facility to provide steam and power for the carbon capture facility. The research performed under this project showed that CO 2 capture at a lignite-fired power plant can successfully be performed. No known fatal flaws that would prevent the continued development of the MRY2 CO 2 capture facility were identified during the pre-FEED study. A TEA performed following DOE methodology shows that applying capture technology to MRY2 may not only meet but exceed the DOE-recognized state-of-the-art baseline.

20 FOSSIL-FUELED POWER PLANTS↗

Development of MGMC: A proxy Multi-Group Monte Carlo Particle Transport Application

This document details the development and current state of MGMC: a proxy Multi-Group Monte Carlo transport application. The goal of this work was to develop a light-weight Monte Carlo transport solver that could be easily reconfigured to test parallelization strategies targeting advanced architectures and heterogeneous computing environments. Additionally, MGMC is able to act as a proxy-app for testing the development of algorithms and the integration of other libraries and into Monte Carlo transport codes. MGMC is currently able to run in parallel using OpenMP for CPU threads or CUDA for NVIDIA GPUs. MGMC was also used to investigate the using SYCL for portable parallelization targeting either CPU threads, vender-agnostic GPUs, and ARM chips, detailed in Section II. In the process of developing MGMC, several other C++ libraries have been created with the intent for re-use in future research projects and potential inclusion in production-level codes, detailed in Section III. The physics capabilities in MGMC are detailed in Section IV, code verification is detailed in Section V, and performance results are detailed in Section VI.

97 MATHEMATICS AND COMPUTING↗