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At least 1,765 records · Page 98

Absolute Molecular Orientation of Isopropanol at Ceria (100) Surfaces: Insight into Catalytic Selectivity from the Interfacial Structure

The initial mechanistic steps underlying heterogeneous chemical catalysis can be described in a framework where the composition, structure, and orientation of molecules adsorbed to reactive interfaces are known. However, extracting this vital information is the limiting step in most cases due in part to challenges in probing the interfacial monolayer with enough chemical specificity to characterize the surface molecular constituents. These challenges are exacerbated at complex or spatially heterogeneous interfaces where competing processes and a distribution of local environments can uniquely drive chemistry. To address these limitations, this work presents a distinctive combination of materials synthesis, surface specific optical experiments, and theory to probe and understand molecular structure at catalytic interfaces. Specifically, isopropanol was adsorbed to surfaces of the model CeO 2 catalyst that were synthesized with only the (100) facet exposed. Vibrational sum-frequency generation was used to probe the molecular monolayer, and with the guidance of density functional theory calculations, was used to extract the structure and absolute molecular orientation of isopropanol at the CeO 2 (100) surface. Our results show that isopropanol is readily deprotonated at the surface, and through the measured absolute molecular orientation of isopropanol, we obtain new insight into the selectivity of the (100) surface to form propylene. Our findings reveal key insight into the chemical and physical phenomena taking place at pristine interfaces thereby pointing to intuitive structural arguments to describe catalytic selectivity in more complex systems.

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Adsorption of Aqueous Crude Oil Components on the Basal Surfaces of Clay Minerals: Molecular Simulations Including Salinity and Temperature Effects

Molecular simulations of the adsorption of representative organic molecules onto the basal surfaces of various clay minerals were used to assess the mechanisms of enhanced oil recovery associated with salinity changes and water flooding. Simulations at the density functional theory (DFT) and classical levels provide insights into the molecular structure, binding energy, and interfacial behavior of saturate, aromatic, and resin molecules near clay mineral surfaces. Periodic DFT calculations reveal binding geometries and ion pairing mechanisms at mineral surfaces while also providing a basis for validating the classical force field approach. Through classical molecular dynamics simulations, the influence of aqueous cations at the interface and the role of water solvation are examined to better evaluate the dynamical nature of cation-organic complexes and their co-adsorption onto the clay surfaces. The extent of adsorption is controlled by the hydrophilic nature and layer charge of the clay mineral. All organic species studied showed preferential adsorption on hydrophobic mineral surfaces. However, the anionic form of the resin (decahydro-2-naphthoic acid)—expected to be prevalent at near-neutral pH conditions in petroleum reservoirs—readily adsorbs to the hydrophilic kaolinite surface through a combination of cation pairing and hydrogen bonding with surface hydroxyl groups. Analysis of cation-organic pairing in both the adsorbed and desorbed states reveals a strong preference for organic anions to coordinate with divalent calcium ions rather than monovalent sodium ions, lending support to current theories regarding low-salinity water flooding.

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Electron Transfer Pathways Facilitating U(VI) Reduction by Fe(II) on Al- vs Fe-Oxides

This study continues mechanistic development of heterogeneous electron transfer (ET) pathways at mineral surfaces in aquatic environments that enable the reduction U(VI) by surface-associated Fe(II). Using computational molecular simulation within the framework of Marcus Theory, our findings highlight the importance of the configurations and interaction of the electron donor and acceptor species with the substrate, with respect to influencing its electronic structure and thereby the ability of semiconducting minerals to facilitate ET. U(VI) reduction by surface-associated Fe(II) (adsorbed or structurally incorporated into the lattice) on an insulating, corundum (001) surface (α-Al2O3) occurs when proximal inner-sphere (IS) surface complexes are formed, such that ET occurs through a combination of direct exchange (i.e., Fe d- and U f-orbitals overlap through space) and superexchange via intervening surface oxygen atoms. U(VI) reduction by coadsorbed Fe(II) on the isostructural semiconducting hematite (α-Fe2O3) basal surface requires either their direct electronic interaction (e.g., IS complexation) or mediation of this interaction indirectly through the surface via an intrasurface pathway. Conceptually possible longer-range ET by charge-hopping through surface Fe atoms was investigated to determine whether this indirect pathway is competitive with direct ET. The calculations show that energy barriers are large for this conduction-based pathway; interfacial ET into the hematite surface is endothermic (+80.1 kJ/mol) and comprises the rate-limiting step (10–6 s–1). The presence of the IS adsorbates appears to weaken the electronic coupling between underlying Fe ions within the surface, resulting in slower intra-surface ET (10–5 s–1) than expected in the bulk basal plane. Our findings lay out first insights into donor-acceptor communication via a charge-hopping pathway through the surface for heterogeneous reduction of U(VI) by Fe(II) and help provide a basis for experimental interrogation of this important process at mineral-water interfaces.

Taylor, S. D.↗

Ni-Doping Effects on Oxygen Removal from an Orthorhombic Mo 2 C (001) Surface: A Density Functional Theory Study

Density functional theory (DFT) calculations were used in this paper to investigate the effect of Ni dopants on the removal of chemisorbed oxygen (O*) from the Mo-terminated (T Mo ) and C-terminated (T C ) Mo 2 C(001) surfaces. The removal of adsorbed oxygen from the catalytic site is essential to maintain the long-term activity and selectivity of the carbide catalysts in the deoxygenation process related to bio-oil stabilization and upgrading. In this contribution, the computed reaction energetics and reaction barriers of O* removal were compared among undoped and Ni-doped Mo 2 C(001) surfaces. The DFT calculations indicate that selected Ni-doped surfaces such as Ni adsorbed on T Mo and T C Mo 2 C(001) surfaces enable weaker binding of important reactive intermediates (O*, OH*) compared to the undoped counterparts, which is beneficial for the O* removal from the catalyst surface. This study thus confirms the promoting effect of the Ni dopant on O* removal reaction on the T Mo Mo 2 C(001) and T C Mo 2 C(001) surfaces. Finally, this computational prediction has been confirmed by the temperature-programmed reduction profiles of Mo 2 C and Ni-doped Mo 2 C catalysts, which had been passivated and stored in an oxygen environment.

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Combining Theory and Experiment for Multitechnique Characterization of Activated CO 2 on Transition Metal Carbide (001) Surfaces

Early transition metal carbides (TMC; TM = Ti, Zr, Hf, V, Nb, Ta, Mo) with face-centered cubic crystallographic structure have emerged as promising materials for CO 2 capture and activation. Density functional theory (DFT) calculations using the Perdew–Burke–Ernzerhof exchange–correlation functional evidence charge transfer from the TMC surface to CO 2 on the two possible adsorption sites, namely, MMC and TopC, and the electronic structure and binding strength differences are discussed. Further, the suitability of multiple experimental techniques with respect to (1) adsorbed CO2 recognition and (2) MMC/TopC adsorption distinction is assessed from extensive DFT simulations. Results show that ultraviolet photoemission spectroscopies (UPS), work function changes, core level X-ray photoemission spectroscopy (XPS), and changes in linear optical properties could well allow for adsorbed CO2 detection. Only infrared (IR) spectra and scanning tunnelling microscopy (STM) seem to additionally allow for MMC/TopC adsorption site distinction. These findings are confirmed with experimental XPS measurements, demonstrating CO 2 binding on single crystal (001) surfaces of TiC, ZrC, and VC. The experiments also help resolving ambiguities for VC, where CO 2 activation was unexpected due to low adsorption energy, but could be related to kinetic trapping involving a desorption barrier. With a wealth of data reported and direct experimental evidence provided, this study aims to motivate further basic surface science experiments on an interesting case of CO 2 activating materials, allowing also for a benchmark of employed theoretical models.

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Theoretical Model and Numerical Simulation of Adsorption and Deformation in Flexible Metal–Organic Frameworks

We report that metal–organic frameworks (MOFs) have recently attracted considerable attention as new nanoporous materials with applications to separation of fluid mixtures, catalysis, gas capture and storage, and drug delivery. A subclass of MOFs, the MIL-53 (with Al or Cr) family, exhibits a complex structural phase transition, often referred to as the breathing transition, which occurs when gas molecules are adsorbed in its pore space. In this phenomenon, the material morphology oscillates between two distinct phases, usually referred to as the narrow-pore (np) and large-pore (lp) phases. We describe a statistical mechanical model based on the energetics of the system that couples the adsorbates with the host and the ensuing structural deformation of the materials. The Hamiltonian of the system consists of the elastic energy of the MOF, the fluid phase energy, and the interaction energy between the gas and MOFs. Minimizing the total energy with respect to both the gas density and the displacement field in the material yields the governing equations for both. The model is used to study the adsorption of CO 2 and CH 4 in MIL-53(Al). Here, the results demonstrate that all reported experimental features of the phenomenon are produced by the model. In particular, consistent with experimental data, the model predicts that the material experiences contraction in the np phase, whereas it undergoes swelling in the lp phase, and that the two phases coexist in the transition zone. The model is, however, completely general and is applicable to any type of guest-responsive material that undergoes deformation as a result of its interaction with the guest molecules.

36 MATERIALS SCIENCE↗

Methoxy Formation Induced Defects on MoS 2

Here, we find that exposure of the MoS 2 basal plane to methanol leads to the formation of adsorbed methoxy and coincides with sulfur vacancy generation. The conversion of methanol to methoxy on MoS 2 is temperature dependent. Density functional theory simulations and experiment indicate that the methoxy moieties are bound to molybdenum, not sulfur, while some adsorbed methanol is readily desorbed near or slightly above room temperature. Our calculations also suggest that the dissociation of methanol via O–H bond scission occurs at the defect site (sulfur vacancy), followed subsequently by formation of a weakly bound H 2 S species that promptly desorbs from the surface with creation of new sulfur vacancy. Photoluminescence and scanning tunneling microscopy show clear evidence of the sulfur vacancy creation on the MoS 2 surface, after exposure to methanol.

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Surface Charge Effects on Fe(II) Sorption and Oxidation at (110) Goethite Surfaces

Iron(III) oxides and oxyhydroxides are among the most reactive minerals in the environment, with surfaces that become charged when immersed in water. The governing role of surface charge over interfacial processes such as metal sorption is well understood. However, its role in interfacial redox reactions, such as when metal sorption is coupled to interfacial electron transfer (ET), is not. This is mainly because surface charge affects not only the types and densities of surface complexes formed but also their respective driving forces for ET. An important case is Fe(II)-catalyzed recrystallization of Fe(III)-oxyhydroxides, in which Fe(II) sorption and interfacial ET are closely linked. We used replica-exchange constant-pH molecular dynamics simulations (Zarzycki, P.; Smith, D. M.; Rosso, K. M. J. Chem. Theory Comput. 2015, 11, 1715–1724) to calculate the distance-dependent electrostatic potential at charged (110) surfaces of goethite particles, assessing its effect on previously computed Fe(II) sorption and interfacial ET free energies (Zarzycki, P.; Kerisit, S.; Rosso, K. M. J. Phys. Chem. C 2015, 119, 3111–3123). We show that Fe(II) adsorbs preferentially as an inner-sphere complex on the negatively charged surface, and as an outer-sphere complex on the positively charged surface because of both electrostatic repulsion and high energy barriers that arise from ordered water layers at the interface. The separation distance between adsorbed Fe(II) and the surface largely dictates adiabatic versus nonadiabatic ET regimes for this interface. The findings help unravel the pH dependence of Fe(II)-catalyzed recrystallization of goethite.

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How Useful Are Common Simulants of Chemical Warfare Agents at Predicting Adsorption Behavior?

We report that nanoporous materials such as metal–organic frameworks (MOFs) have attractive properties for selective capture of chemical warfare agents (CWAs). For obvious reasons, most research on adsorption of CWAs is performed with simulant molecules rather than real agents. This paper examines how effectively common CWA simulants mimic the adsorption properties of sarin and soman. To this end, we perform molecular simulations in the dilute adsorption limit for four simulants [dimethyl methylphosphonate (DMMP), diethyl chlorophosphate (DCP), diisopropyl fluorophosphate, and dimethyl p-nitrophenyl phosphate (DMNP)] and sarin and soman in a set of 2969 MOFs with experimentally known crystal structures. To establish the robustness of the conclusions with respect to the force field used in these simulations, each system was examined with two independent force fields, a “generic” force field and a density functional theory (DFT)-derived force field we established based on extensive dispersion-corrected DFT calculations of adsorption in the well-known MOF UiO-66. Our results show that when judging the performance of adsorbents using the heat of adsorption, DCP and DMMP are the best simulants for the adsorption of sarin, while DMNP is the best simulant for soman. The adsorption properties of DCP or DMMP show a strong correlation with sarin over a range of MOFs, but the correlation between DMNP and soman is considerably weaker. Finally, comparisons of results with both force fields indicate that our main conclusions are robust with respect to the force field used to define adsorbate–MOF interactions.

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Theoretical Approaches to Describing the Oxygen Reduction Reaction Activity of Single-Atom Catalysts

Single-atom catalysts have recently emerged as promising low-cost alternatives to Pt for the oxygen reduction reaction (ORR). Given the unique properties that distinguish these systems from traditional transition-metal electrocatalysts, it is essential to benchmark and establish appropriate computational approaches to study these novel materials. Herein, we employ multiple levels of theory, including wave function methods, density functional theory (DFT), and classical simulations, to investigate Cu-modified covalent triazine framework catalysts (Cu/CTF). We consider three major aspects of treating this system computationally. First, we present a step-wise approach to predict the ORR mechanism and adsorbate coverages on Cu/CTF. We then benchmark various DFT methods to coupled-cluster theory with the domain-based local pair natural orbital approximation, which indicates that HSE06 and PBE0 hybrid functionals most accurately describe the adsorption energies of ORR adsorbates on Cu/CTF. We finally employ thermodynamic integration and other techniques to consider solvation effects, which play significant roles in predicting the energies of reaction intermediates and the overall ORR pathway. Lastly, our findings indicate that accurate descriptions of both the electronic structure and solvation are necessary to understand the ORR activity of Cu/CTF.

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Ab Initio Thermodynamics of Iridium Surface Oxidation and Oxygen Evolution Reaction

Iridium-based materials are considered as state-of-the-art electrocatalysts for oxygen evolution reaction (OER), however, their stability and catalytic activity greatly depend on surface-state changes induced by electrochemical cycling. To better understand the behavior of the low-index Ir surfaces in an electrochemical environment, we perform a systematic thermodynamic analysis by means of the density functional theory (DFT) calculations. On the basis of computed surface energies of the Ir (111), (110) and (100) facets as a function of applied electrode potential and coverage of adsorbed water species we determine stability maps and predict equilibrium shapes of Ir nanoparticles. Our calculations also show that metastable oxide precursors formed at the initial stages of Ir surface oxidation are responsible for enhanced catalytic activity toward OER as compared to metal surfaces covered by oxygen adsorbates and thick-oxide films. Such enhancement occurs not only due to the modified thermodynamic stability of OER intermediates, but also because thin-oxide layers may display the more energetically favorable I2M (interaction of two M–O units) rather than WNA (water nucleophilic attack) OER mechanism.

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Effect of Anions on the Changes in the Structure and Adsorption Mechanism of Zirconium Species at the Muscovite (001)–Water Interface

Multivalent cations primarily exist as polynuclear hydroxo and oxyhydroxo clusters and/or nanoparticles (NPs) in aqueous environments, where their interactions with mineral surfaces can be influenced by complexing anions. In this work, we explored the distribution of tetravalent Zr adsorbed on the negatively charged basal surface of muscovite mica in four background electrolytes (0.1 M NaClO 4 , 0.1 M NaCl, 0.04 M Na 2 SO 4 , and 0.045 M Na 2 HPO 4 ) at constant pH (= 3), total Zr(IV) concentration (= 0.1 mM), and ionic strength (= 0.1 M). The results show that aqueous Zr speciation determined by reactions with anions controls the formation and structure of Zr-containing adsorbates on the mica surface. The Zr coverages measured by X-ray fluorescence (XRF) in ClO 4 - and Cl - systems were 1.3 and 2.1 Zr/A UC (where A UC = 46.72 Å 2 is the area of the unit cell of the mica (001) surface), respectively, and mostly remained unchanged during the reaction time from 6 to 50 h. In these conditions, Zr adsorption occurred both as small NPs (with an average height of ~4 nm observed by ex situ atomic force microscopy, AFM) and in a ~2 nm-thick molecular layer (observed by in situ resonant anomalous X-ray reflectivity, RAXR). In comparison, higher Zr coverages that increased with reaction time (i.e., from ~4 to ~7 Zr/A UC from 6 to 50 h reactions) were observed in the SO 4 2- system. Ex situ AFM showed that the Zr uptake in this system occurred predominantly as NPs that were ~5 to 15 nm tall and 20 to 40 nm wide, but no evidence of the interfacial molecular-layer formation was observed by RAXR. In the HPO 4 2– solution, all measurements unequivocally showed no significant Zr sorption, in stark contrast to the observations in the other solutions. Details of the Zr surface coverage and sorption modes are consistent with the known clustering of tetravalent Zr in solutions in the presence of these anions. These results reveal the critical impact of anions on the adsorption affinity and mechanism of Zr on the negatively charged mica surface.

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Understanding the Binding of Aromatic Hydrocarbons on Rutile TiO2(110)

The adsorption of cyclohexane, benzene, and alkyl-substituted benzene derivatives is studied on rutile TiO2(110) by a combination of molecular beam dosing, temperature programmed desorption, and density functional theory (DFT). An inversion analysis is used to extract the coverage dependent desorption energies from TiO2(110). The values of the suitable prefactors are derived from simple statistical mechanical models assuming different limits in the adsorbate mobility on the surface. The prefactor values determined using the vibrational frequencies from DFT calculations corroborate this analysis and show that the adsorbates are mobile in 1- or 2-dimensions on corrugated TiO2(110) surface. The adsorption of benzene derivatives is found to be dominated by the dative Lewis acid-base interactions of the p system with the surface Ti ions. While the desorption energy generally increases with increasing the length and the number of substituents, the difference between the desorption energies decreases as the number and length of substituents is increased. This is a consequence of the destabilization of the optimum bonding configuration of the benzene ring and the alkyl groups with their increasing length and number. The absolute saturation coverages of uncompressed layers correspond approximately to one molecule per two Ti5c sites and decrease slightly with increasing molecule size in a good agreement with van der Waals sizes of the molecules.

Chen, Long↗

Electron- and Thermal-Stimulated Synthesis of Water on Boehmite (y-AlOOH) Nanoplates

Utilizing a combination of electron stimulated desorption, infrared spectroscopy and temperature program desorption measurements, we show that molecular water is synthesized during electron irradiation on boehmite nanoplates and postulate that the reaction proceeds first through decomposition of the hydroxyl to produce trapped hydrogen atoms. Once released, these hydrogen atoms can react with a neighboring hydroxyl resulting in adsorbed water. In addition, molecular water is readily formed on the surface of the boehmite nanosheets through thermal induced recombinative desorption. Peak water production via recombinative desorption occurs at 750 K in agreement with previous studies. We have also identified a weak desorption feature near 400 K which is likely strongly adsorbed water. The derived experimental desorption activation energy of water assuming full coverage is 98.6 kJ mol-1.

Jones, Brant M.↗

Is There a Negative Thermal Expansion in Supported Metal Nanoparticles? An in Situ X-ray Absorption Study Coupled with Neural Network Analysis

Interactions with their support, adsorbates, and unique structural motifs are responsible for many intriguing properties and potential applications of supported metal nanoparticles (NPs). At the same time, they complicate the interpretation of experimental data. In fact, the methods and approaches that work well for the ex situ analysis of bulk materials may be inaccurate or introduce artifacts in the in situ analysis of nanomaterials. Here, we revisit the controversial topic of negative thermal expansion and anomalies in the Debye temperature reported for oxide-supported metal NPs. In situ X-ray absorption experimental data collected for Pt NPs in ultrahigh vacuum and an advanced data analysis approach based on an artificial neural network demonstrate that Pt NPs do not exhibit intrinsic negative thermal expansion. Similarly, as for bulk materials, in the absence of adsorbates and strong particle-support interaction, the bond lengths in metal NPs increase with temperature. Lastly, the previously reported anomalies in particle-size-dependent Debye temperatures can also be linked to the artifacts in the interpretation of conventional X-ray absorption data of disordered materials such as NPs.

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Probing Structural Reconstruction of Metal Nanoparticles under Annealing and Water Vapor Conditions: A Theoretical Study

Knowing the structural reconstruction of metal nanoparticles (NPs) under working conditions is of great importance to catalytic processes. Here, using Wulff construction combined with density functional theory (DFT) and molecular dynamics (MD) simulation, we investigated truncated octahedron-based Rh and Ir NPs (3.5, 5.5, and 9.5 nm in size) with different morphology for their structural reconstruction under annealing and water vapor conditions. Our MD results show that the NPs with lower average atomic coordination number ($\overline{CN}$) of surface atoms have lowered structural transformation inertness and thermal stability, resulting in more severe structural transition especially for smaller-sized NPs and Ir NPs. Under water vapor conditions, the competition between the interfacial tension ($γ^{\overline{int}}_{hkl}$) of (111) and (110) facets plays a major role in driving the shape evolution of Rh and Ir NPs by minimizing the total surface tension. It is revealed that annealing in vacuum/water vapor condition is an irreversible/reversible process on Rh and Ir NPs. We identified that the total adsorbate–metal ($γ^{\overline{int}}_{hkl}$) can serve as a key stability parameter for describing the potential energy surface of adsorbate–metal NP system in a variable gaseous environment (P, T).

36 MATERIALS SCIENCE↗

Facile Electron Transfer to CO 2 during Adsorption at the Metal|Solution Interface

We estimate the rate of electron transfer to CO 2 at the Au (211)|water interface during adsorption in an electrochemical environment under reducing potentials. On the basis of density functional theory calculations at the generalized gradient approximation and hybrid levels of theory, we find electron transfer to the adsorbed *CO 2 to be very facile. This high rate of transfer is estimated by the energy distribution of the adsorbate-induced density of states as well as from the interaction between diabatic states representing neutral and negatively charged CO 2 . Up to 0.62 electrons is transferred to CO 2 , and this charge adiabatically increases with the bending angle to a lower limit of 137°. Finally, we conclude that this rate of electron transfer is extremely fast compared to the time scale of the nuclear degrees of freedom, that is, the adsorption process.

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