Engineering Papers⌕ Search

SEARCH · Engineering Papers

Results for “structural complexity”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 1,729 records · Page 96

Carbon dioxide in an ionic liquid: Structural and rotational dynamics

Ionic liquids (ILs), which have widely tunable structural motifs and intermolecular interactions with solutes, have been proposed as possible carbon capture media. In order to inform the choice of an optimal ionic liquid system, it can be useful to understand the details of dynamics and interactions on fundamental time scales (femtoseconds to picoseconds) of dissolved gases, particularly carbon dioxide (CO 2 ), within the complex solvation structures present in these uniquely organized materials. The rotational and local structural fluctuation dynamics of CO 2 in the room temperature ionic liquid 1-ethyl-3-methylimidazolium bis(trifluoromethylsulfonyl)imide (EmimNTf2) were investigated by using ultrafast infrared spectroscopy to interrogate the CO 2 asymmetric stretch. Polarization-selective pump probe measurements yielded the orientational correlation function of the CO 2 vibrational transition dipole. It was found that reorientation of the carbon dioxide occurs on 3 time scales: 0.91 ± 0.03, 8.3 ± 0.1, 54 ± 1 ps. The initial two are attributed to restricted wobbling motions originating from a gating of CO 2 motions by the IL cations and anions. The final (slowest) decay corresponds to complete orientational randomization. Two-dimensional infrared vibrational echo (2D IR) spectroscopy provided information on structural rearrangements, which cause spectral diffusion, through the time dependence of the 2D line shape. Analysis of the time-dependent 2D IR spectra yields the frequency-frequency correlation function (FFCF). Polarization-selective 2D IR experiments conducted on the CO 2 asymmetric stretch in the parallel- and perpendicular-pumped geometries yield significantly different FFCFs due to a phenomenon known as reorientation-induced spectral diffusion (RISD), revealing strong vector interactions with the liquid structures that evolve slowly on the (independently measured) rotation time scales. To separate the RISD contribution to the FFCF from the structural spectral diffusion contribution, the previously developed first order Stark effect RISD model is reformulated to describe the second order (quadratic) Stark effect—the first order Stark effect vanishes because CO 2 does not have a permanent dipole moment. Through this analysis, we characterize the structural fluctuations of CO 2 in the ionic liquid solvation environment, which separate into magnitude-only and combined magnitude and directional correlations of the liquid’s time dependent electric field. This new methodology will enable highly incisive comparisons between CO 2 dynamics in a variety of ionic liquid systems.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Time-of-Use and Demand Charge Battery Controller Using Stochastic Model Predictive Control

Stationary batteries in residential and commercial buildings are often used to smooth customer load profiles and to lower customer electricity bills. Controllers for these battery systems should account for customer energy consumption, rate structures, and high internal battery temperatures, which can lead to reduced performance over the battery lifetime. It is important to consider the uncertainty in forecasting energy consumption and temperature, especially for customers with highly variable and uncertain loads. We propose a novel battery controller using stochastic model predictive control that accounts for these uncertainties and can handle complex rate structures, including demand charges. We show that the controller performs better than standard model predictive control when there is significant uncertainty in the forecast. We also show improvements in the performance with more accurate forecasts and with a more aggressive control strategy.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Time-of-Use and Demand Charge Battery Controller Using Stochastic Model Predictive Control: Preprint

Stationary batteries in residential and commercial buildings are often used to smooth customer load profiles and to lower customer electricity bills. Controllers for these battery systems should account for customer energy consumption, rate structures, and high internal battery temperatures, which can lead to reduced performance over the battery lifetime. It is important to consider the uncertainty in forecasting energy consumption and temperature, especially for customers with highly variable and uncertain loads. We propose a novel battery controller using stochastic model predictive control that accounts for these uncertainties and can handle complex rate structures, including demand charges. We show that the controller performs better than standard model predictive control when there is significant uncertainty in the forecast. We also show improvements in the performance with more accurate forecasts and with a more aggressive control strategy.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Battery Control Using Stochastic Model Predictive Control

Stationary batteries in residential and commercial buildings are often used to smooth customer load profiles and to lower customer electricity bills. Controllers for these battery systems should account for customer energy consumption, rate structures, and high internal battery temperatures, which can lead to reduced performance over the battery lifetime. It is important to consider the uncertainty in forecasting energy consumption and temperature, especially for customers with highly variable and uncertain loads. We propose a novel battery controller using stochastic model predictive control that accounts for these uncertainties and can handle complex rate structures, including demand charges. We show that the controller performs better than standard model predictive control when there is significant uncertainty in the forecast. We also show improvements in the performance with more accurate forecasts and with a more aggressive control strategy.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Ultrathin epitaxial MgB 2 on SiC: Substrate surface-polarity-dependent properties

High-quality, ultrathin superconducting films are required for advanced devices such as hot-electron bolometers, superconducting nanowire single-photon detectors, and quantum applications. Using hybrid physical-chemical vapor deposition, we show that MgB 2 films as thin as 4 nm can be fabricated on the carbon-terminated 6⁢H-SiC (0001) surface with a superconducting transition temperature above 33 K and a rms roughness of 0.7 nm. Remarkably, the film quality is a function of the SiC surface termination, with the C-terminated surface preferred to the Si-terminated surface. To understand the MgB 2 thin film/SiC substrate interactions giving rise to this difference, we characterized the interfacial structures using Rutherford backscattering spectroscopy/channeling, electron-energy-loss spectroscopy, and x-ray photoemission spectroscopy. The MgB 2 /SiC interface structure is complex and different for the two terminations. Both terminations incorporate substantial unintentional oxide layers influencing MgB 2 growth and morphology, but with a different extent, intermixing, and interface chemistry. In this paper, we report measurements of transport, resistivity, and the critical superconducting temperature of MgB 2 /SiC that are different for the two terminations, and they link interfacial structure variations to observed differences. The result shows that the C face of SiC is a preferred substrate for the deposition of ultrathin superconducting MgB 2 films.

36 MATERIALS SCIENCE↗

Scalable submicrometer additive manufacturing

High-throughput fabrication techniques for generating arbitrarily complex three-dimensional structures with nanoscale features are desirable across a broad range of applications. Two-photon lithography (TPL)–based submicrometer additive manufacturing is a promising candidate to fill this gap. However, the serial point-by-point writing scheme of TPL is too slow for many applications. Attempts at parallelization either do not have submicrometer resolution or cannot pattern complex structures. We overcome these difficulties by spatially and temporally focusing an ultrafast laser to implement a projection-based layer-by-layer parallelization. This increases the throughput up to three orders of magnitude and expands the geometric design space. We demonstrate this by printing, within single-digit millisecond time scales, nanowires with widths smaller than 175 nanometers over an area one million times larger than the cross-sectional area.

36 MATERIALS SCIENCE↗

Hydrophilic domain structure in polymer exchange membranes: Simulations of NMR spin diffusion experiments to address ability for model discrimination

Here, we detail the development of a flexible simulation program (NMR_DIFFSIM) that solves the nuclear magnetic resonance (NMR) spin diffusion equation for arbitrary polymer architectures. The program was used to explore the proton ( 1 H) NMR spin diffusion behavior predicted for a range of geometrical models describing polymer exchange membranes. These results were also directly compared with the NMR spin diffusion behavior predicted for more complex domain structures obtained from molecular dynamics (MD) simulations. The numerical implementation and capabilities of NMR_DIFFSIM were demonstrated by evaluating the experimental NMR spin diffusion behavior for the hydrophilic domain structure in sulfonated Diels-Alder Poly(Phenylene) (SDAPP) polymer membranes. The impact of morphology variations as a function of sulfonation and hydration level on the resulting NMR spin diffusion behavior were determined. These simulations allowed us to critically address the ability of NMR spin diffusion to discriminate between different structural models, and to highlight the extremely high fidelity experimental data required to accomplish this. A direct comparison of experimental double-quantum-filtered 1 H NMR spin diffusion in SDAPP membranes to the spin diffusion behavior predicted for MD-proposed morphologies revealed excellent agreement, providing experimental support for the MD structures at low to moderate hydration levels.

36 MATERIALS SCIENCE↗

Crystal structures of Mycobacterium tuberculosis GlgE and complexes with non-covalent inhibitors

GlgE is a bacterial maltosyltransferase that catalyzes the elongation of a cytosolic, branched α-glucan. In Mycobacterium tuberculosis (M. tb), inactivation of GlgE (Mtb GlgE) results in the rapid death of the organism due to a toxic accumulation of the maltosyl donor, maltose-1-phosphate (M1P), suggesting that GlgE is an intriguing target for inhibitor design. In this study, the crystal structures of the Mtb GlgE in a binary complex with maltose and a ternary complex with maltose and a maltosyl-acceptor molecule, maltohexaose, were solved to 3.3 Å and 4.0 Å, respectively. The maltohexaose structure reveals a dominant site for α-glucan binding. To obtain more detailed interactions between first generation, non-covalent inhibitors and GlgE, a variant Streptomyces coelicolor GlgEI (Sco GlgEI-V279S) was made to better emulate the Mtb GlgE M1P binding site. The structure of Sco GlgEI-V279S complexed with α-maltose-C-phosphonate (MCP), a non-hydrolyzable substrate analogue, was solved to 1.9 Å resolution, and the structure of Sco GlgEI-V279S complexed with 2,5-dideoxy-3-O-α-D-glucopyranosyl-2,5-imino-D-mannitol (DDGIM), an oxocarbenium mimic, was solved to 2.5 Å resolution. These structures detail important interactions that contribute to the inhibitory activity of these compounds, and provide information on future designs that may be exploited to improve upon these first generation GlgE inhibitors.

36 MATERIALS SCIENCE↗

A Prediction of Uranium(VI) Diffusion in Montmorillonite at Various Chemical Solution Conditions

Most nuclear waste disposal options include compacted bentonite, predominately consisting of montmorillonite clay, as part of a barrier system to minimize contaminant mobility. Uranium (U) is the primary element in spent nuclear fuel, and a potential contaminant of water resources. Uranium sorption onto clay and its slow diffusive transport away from waste canisters are expected to limit U(VI) mobility, and possibly also control nuclear fuel degradation rates based on mass action considerations. A prediction of U(VI) diffusion in these systems is complicated by two main factors: (1) the complex mineralogical structure of montmorillonite clay, leading to two types of clay porosities and surface sites, and (2) the dependence of U(VI) sorption on U(VI) solution speciation and the specific chemical system conditions. For instance, depending on pH and ionic strength, U(VI) may sorb onto montmorillonite due to weak ion exchange reactions or the formation of stable surface complexes. Furthermore, in contrast to conventional porous media, U(VI) diffusion in montmorillonite is not only limited by contaminant sorption, but also by a (potential) lack of access to the full clay porosity for some U(VI) solution species. For instance, at the high degrees of clay compaction expected in future barrier systems, the partial or full exclusion of U(VI) from negatively-charged clay interlayer spaces may substantially decrease U(VI) fluxes. In this modeling study, we specifically investigated how the charge of U(VI) solution species affects U(VI) sorption and diffusion behavior. For this purpose, we first simplified complex chemical solution speciation diagrams to charge speciation diagrams. Then, we coupled an existing U(VI) surface complexation model (Tournassat et al., Geochim. Cosmochim. Acta, 2018) with an analytical solution of the diffusion equation to simulate U(VI) mobility in lab-scale through-diffusion experiments for various chemical conditions. Our results suggest that there are two important parameters that govern U(VI) diffusion in these systems. First, U(VI) surface complexation on clay edge surfaces leads to contaminant retardation. On the field scale, this will determine how early a plume may cross site boundaries and pose risks to drinking water resources. Second, the degree of access of U(VI) solution species to diffuse layers in clay interlayer spaces largely controls U(VI) diffusive fluxes. In the field, this parameter will govern the level of U(VI) concentrations that can be expected in contaminated waters.

Pistorino, Jonathan C.↗

Nonlinear viscoelastic response of silicone additively manufactured direct ink write (DIW) foams under repetitive compression

To investigate dynamic fatigue behavior of foam in military protective applications, such as helmets, additively manufactured (AM) foams were compressively strained into the plateau region using a reduced design of experiments. A simple power law was found to govern the decline in dynamic stiffness (complex modulus) as the foams underwent the purchase order requirement of 10,000 cycles of small deformation in the plateau region. This rate of decline was newly found to correlate with the degree of nonlinearity in the material’s deformation, quantified using total harmonic distortion. Materials with low nonlinearity exhibited relatively stable stiffness across cycles, while those with high nonlinearity experienced greater losses. The observed nonlinearity depended on both applied stress and strain rate. A strong linear correlation (R 2 = 0.78) was identified between second-order nonlinearity and the time-dependent stiffness response. Two lattice structures were examined: face-centered tetragonal (FCT) and simple cubic (SC). The SC material exhibited higher total harmonic distortion (5%) and lower stiffness retention than the FCT (2%). In conclusion, these results suggest that for cyclic compression applications in a wide variety of industries such as packaging, personal protective equipment, or aerospace, selecting materials with lower stress and greater structural uniformity can enhance the stability of dynamic performance.

42 ENGINEERING↗

Understanding the structural basis of species selective, stereospecific inhibition for Cryptosporidium and human thymidylate synthase

Thymidylate synthase (TS), found in all organisms, is an essential enzyme responsible for the de novo synthesis of deoxythymidine monophosphate. The TS active sites of the protozoal parasite Cryptosporidium hominis and human are relatively conserved. Evaluation of antifolate compound 1 and its R-enantiomer 2 against both enzymes reveals divergent inhibitor selectivity and enzyme stereospecificity. To establish how C. hominis and human TS (ChTS and hTS) selectively discriminate 1 and 2, respectively, we determined crystal structures of ChTS complexed with 2 and hTS complexed with 1 or 2. Coupled with the previously determined structure of ChTS complexed with 1, we finally discuss a possible mechanism for enzyme stereospecificity and inhibitor selectivity.

59 BASIC BIOLOGICAL SCIENCES↗

Perspective: Emergent topologies in oxide superlattices

The ability to synthesize high-quality, complex-oxide heterostructures has created a veritable playground in which to explore emergent phenomena and exotic phases which arise from the interplay of spin, charge, orbital, and lattice degrees of freedom. Of particular interest is the creation of artificial heterostructures and superlattices built from two or more materials. Through such approaches, it is possible to observe new phases and phenomena that are not present in the parent materials alone. This is especially true in ferroelectric materials where the appropriate choice of superlattice constituents can lead to structures with complex phase diagrams and rich physics. In this article, we review and explore future directions in such ferroic superlattices wherein recent studies have revealed complex emergent polarization topologies, novel states of matter, and intriguing properties that arise from our ability to manipulate materials with epitaxial strain, interfacial coupling and interactions, size effects, and more. We focus our attention on recent work in (PbTiO 3 ) n /(SrTiO 3 ) n superlattices wherein exotic polar-vortex structures have been observed. We review the history of these observations and highlights of recent studies and conclude with an overview and prospectus of how the field may evolve in the coming years.

36 MATERIALS SCIENCE↗

Structures of vertebrate R2 retrotransposon complexes during target-primed reverse transcription and after second-strand nicking

R2 retrotransposons are site-specific eukaryotic non–long terminal repeat retrotransposons that copy and paste into gene loci encoding ribosomal RNAs. Recently, we demonstrated that avian A-clade R2 proteins achieve efficient and precise insertion of transgenes into their native safe-harbor loci in human cells. The features of A-clade R2 proteins that support gene insertion are not well characterized. Here, we report high-resolution cryo–electron microscopy structures of two vertebrate A-clade R2 proteins at the initiation of target-primed reverse transcription and after cDNA synthesis and second-strand nicking. Using biochemical and cellular assays, we illuminate the basis for high selectivity of template use and unique roles for each of the three zinc-finger domains in nucleic acid recognition. Reverse transcriptase active site architecture is reinforced by an unanticipated insertion motif specific to vertebrate A-clade R2 proteins. Our work provides the first insights into A-clade R2 protein structure during gene insertion and may enable future improvement and adaptation of R2-based systems for precise transgene insertion.

Science & Technology - Other Topics↗

Modular hybrid modeling to increase efficiency, explore structural uncertainty, and allow multidimensional complexity scaling in land surface models

Land surface models (LSMs) are indispensable tools for predicting hydrologic extremes, as well as a particularly uncertain component of Earth system models that has stubbornly resisted the convergence in projections over several successive generations of model intercomparisons. This uncertainty in LSMs is poorly quantified and poorly attributed to specific processes, which has hampered efforts to focus research in reducing uncertainty. This has resulted from sparse sampling of the possible uncertainty space—which is high-dimensional and has contributions from parametric, structural, initial, and boundary condition uncertainties—as an artifact of CMIP-type ensembles of opportunity and limitations inherent in observational benchmarks. A new approach is needed to understand and reduce this uncertainty, based around individual LSMs that can represent the breadth of assumptions represented in current CMIP-type efforts, while at the same time exploring that uncertainty in a systematic way, confronting multiple types of observations, and where justified, replacing process representations with ML-driven emulators. We propose an approach of modular hybrid modeling to address these challenges.

58 GEOSCIENCES↗

Multislice does it all—calculating the performance of nanofocusing X-ray optics

Here, we describe an approach to calculating the optical performance of a wide range of nanofocusing X-ray optics using multislice scalar wave propagation with a complex X-ray refractive index. This approach produces results indistinguishable from methods such as coupled wave theory, and it allows one to reproduce other X-ray optical phenomena such as grazing incidence reflectivity where the direction of energy flow is changed significantly. Just as finite element analysis methods allow engineers to compute the thermal and mechanical responses of arbitrary structures too complex to model by analytical approaches, multislice propagation can be used to understand the properties of the real-world optics of finite extent and with local imperfections, allowing one to better understand the limits to nanoscale X-ray imaging.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Graph-based machine learning improves just-in-time defect prediction

The increasing complexity of today’s software requires the contribution of thousands of developers. This complex collaboration structure makes developers more likely to introduce defect-prone changes that lead to software faults. Determining when these defect-prone changes are introduced has proven challenging, and using traditional machine learning (ML) methods to make these determinations seems to have reached a plateau. In this work, we build contribution graphs consisting of developers and source files to capture the nuanced complexity of changes required to build software. By leveraging these contribution graphs, our research shows the potential of using graph-based ML to improve Just-In-Time (JIT) defect prediction. We hypothesize that features extracted from the contribution graphs may be better predictors of defect-prone changes than intrinsic features derived from software characteristics. We corroborate our hypothesis using graph-based ML for classifying edges that represent defect-prone changes. This new framing of the JIT defect prediction problem leads to remarkably better results. We test our approach on 14 open-source projects and show that our best model can predict whether or not a code change will lead to a defect with an F1 score as high as 77.55% and a Matthews correlation coefficient (MCC) as high as 53.16%. This represents a 152% higher F1 score and a 3% higher MCC over the state-of-the-art JIT defect prediction. We describe limitations, open challenges, and how this method can be used for operational JIT defect prediction.

59 BASIC BIOLOGICAL SCIENCES↗

Low temperature synthesis route and structural characterization of (Bi 0.5 A 0.5 )(Sc 0.5 Nb 0.5 )O 3 ( A = K + and Na + ) perovskites

We report two new perovskites, (Bi 0.5 A 0.5 )(Sc 0.5 Nb 0.5 )O 3 where A = K + and Na + , have been made phase pure for the first time. The synthesis procedure that prevented the formation of pyrochlore impurities is described. B -site ordering in A = K + is successfully achieved by prolonged heating. Combined Rietveld refinement on synchrotron X-ray diffraction and neutron diffraction data is used to determine the complex average structure of these materials. A = Na + crystallizes in the tetragonal P 4/ mbm space group and has disordered a 0 a 0 c + rotations of B O 6 octahedra. A = K + crystallizes in the cubic Pm m space group, but shows local A -site displacements in the [100] direction. Both materials are highly disordered but illustrate the potential of ( A )NbO 3 -BiScO 3 solid solutions as useful piezoelectrics or relaxors.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Similar local order in disordered fluorite and aperiodic pyrochlore structures

A major challenge to understanding the response of materials to extreme environments ( e.g. , nuclear fuels/waste forms and fusion materials) is to unravel the processes by which a material can incorporate atomic-scale disorder, and at the same time, remain crystalline. While it has long been known that all condensed matter, even liquids and glasses, possess short-range order, the relation between fully-ordered, disordered, and aperiodic structures over multiple length scales is not well understood. For example, when defects are introduced ( via pressure or irradiation) into materials adopting the pyrochlore structure, these complex oxides either disorder over specific crystallographic sites, remaining crystalline, or become aperiodic. Here we present neutron total scattering results characterizing the irradiation response of two pyrochlores, one that is known to disorder (Er 2 Sn 2 O 7 ) and the other to amorphize (Dy 2 Sn 2 O 7 ) under ion irradiation. The results demonstrate that in both cases, the local pyrochlore structure is transformed into similar short range configurations that are best fit by the orthorhombic weberite structure, even though the two compositions have distinctly different structures, aperiodic vs. disordered-crystalline, at longer length scales. Thus, a material's resistance to amorphization may not depend primarily on local defect formation energies, but rather on the structure's compatibility with meso-scale modulations of the local order in a way that maintains long-range periodicity.

36 MATERIALS SCIENCE↗