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HTESP (High-throughput electronic structure package): A package for high-throughput ab initio calculations

High-throughput ab initio calculations are the indispensable parts of data-driven discovery of new materials with desirable properties, as reflected in the establishment of several online material databases. The accumulation of extensive theoretical data through computations enables data-driven discovery by constructing machine learning and artificial intelligence models to predict novel compounds and forecast their properties. Efficient usage and extraction of data from these existing online material databases can accelerate the next stage materials discovery that targets different and more advanced properties, such as electron–phonon coupling for phonon-mediated superconductivity. However, extracting data from these databases, generating tailored input files for different ab initio calculations, performing such calculations, and analyzing new results can be demanding tasks. Here, in this work, we introduce a software package named “HTESP” (High-Throughput Electronic Structure Package) written in Python and Bash languages, which automates the entire workflow including data extraction, input file generation, calculation submission, result collection and plotting. Our HTESP will help speed up future computational materials discovery processes.

36 MATERIALS SCIENCE↗

Imaging Systems Provide Maps for U.S. Soldiers

Spanning nearly four decades, the remarkable Landsat program has continuously provided data about the Earth s surface, including detailed maps of vegetation, land use, forest extent and health, surface water, population distribution, as well as how these features have changed over time. Managed by NASA and the U.S. Geological Survey, Landsat s series of satellites obtain data through passive remote sensing, or the use of sensors to read the energy reflected or emitted from the Earth s surface. After the data from the sensors is processed and analyzed, it can be applied to create information-rich images of the planet. While the Landsat program has launched seven satellites since 1972, only Landsat 5 and 7 are currently operating. The next spacecraft in line to ensure continuity of data for years to come is the Landsat Data Continuity Mission (LDCM). Planned for launch in 2012, LDCM will take measurements of the Earth in visible, nearinfrared, shortwave infrared, and thermal infrared bands. In addition to widespread use for land use planning and monitoring on local to regional scales, support for disaster response and evaluations, as well as water use monitoring, LDCM measurements will directly serve NASA s research in the areas of climate, the carbon cycle, ecosystems, the water cycle, biogeochemistry, and Earth s surface and interior.

Source record↗

Geonex: A NASA-NOAA Collaboration for Producing Land Surface Products from Geostationary Sensors Using Cloud Computing

The latest generation of geostationary satellites carry sensors such as the Advanced Baseline Imager (GOES-16/17) and the Advanced Himawari Imager (Himawari-8/9) that closely mimic the spatial and spectral characteristics of MODIS and VIIRS, useful for monitoring land surface conditions. The NASA Earth Exchange (NEX) team at Ames Research Center has embarked on a collaborative effort among scientists from NASA and NOAA exploring the feasibility of producing operational land surface products similar to those from MODIS/VIIRS. The team built a processing pipeline called GEONEX that is capable of converting raw geostationary data into routine products of Fires, surface reflectances, vegetation indices, LAI/FPAR, ET and GPP/NPP using algorithms adapted from both NASA/EOS and NOAA/GOES-R programs. The GEONEX pipeline has been deployed on Amazon Web Services cloud platform and it currently leverages near-realtime geostationary data hosted in AWS public datasets under a NOAA-AWS agreement.Initial analyses of various products from ABI/AHI sensors suggest that they are comparable to those from MODIS in representing the spatio-temporal dynamics of land conditions. Cloud computing offers a variety of options for deploying the GEONEX pipeline including choice CPUs, storage media, and automation. We estimate the cost of deploying GEONEX to be $400 - 750 a month for processing data (every 30 minutes) and producing products over the conterminous US. For products such as Fire, latency can be as little as 10 minutes from the time of data acquisition.

Geostationary↗

GEONEX: Webpage to Display NASA-NOAA Collaboration of Producing Land Surface Products from Geostationary Sensors

The latest generation of geostationary satellites carry sensors such as the Advanced Baseline Imager (GOES-16/17) and the Advanced Himawari Imager (Himawari-8/9) that closely mimic the spatial and spectral characteristics of MODIS and VIIRS, useful for monitoring land surface conditions. The NASA Earth Exchange (NEX) team at Ames Research Center has embarked on a collaborative effort among scientists from NASA and NOAA exploring the feasibility of producing operational land surface products similar to those from MODIS/VIIRS. The team built a processing pipeline called GEONEX that is capable of converting raw geostationary data into routine products of Fires, surface reflectances, vegetation indices, LAI/FPAR, ET and GPP/NPP using algorithms adapted from both NASA/EOS and NOAA/GOES-R programs. The GEONEX pipeline has been deployed on Amazon Web Services cloud platform and it currently leverages near-realtime geostationary data hosted in AWS public datasets under a NOAA-AWS agreement.In order to better introduce the GEONEX products to the science community, we set up a simple webpage (www.geonex.org) to describe the background and the motivation of the project, the algorithms used in deriving the products, and user manuals to the data files. We will also update the status of the data processing, in particular the near-real-time products, on the website and provide links (in text or json files) to the latest datasets.

geostationary↗

Geonex: Land Surface Monitoring from a New Generation of Geostationary Sensors

The latest generation of geostationary satellites carry sensors such as the Advanced Baseline Imager (GOES-16/17) and the Advanced Himawari Imager (Himawari-8/9) that closely mimic the spatial and spectral characteristics of MODIS and VIIRS, useful for monitoring land surface conditions. The NASA Earth Exchange (NEX) team at Ames Research Center has embarked on a collaborative effort among scientists from NASA and NOAA exploring the feasibility of producing operational land surface products similar to those from MODIS/VIIRS. The team built a processing pipeline called GEONEX that is capable of converting raw geostationary data into routine products of Fires, surface reflectances, vegetation indices, LAI/FPAR, ET and GPP/NPP using algorithms adapted from both NASA/EOS and NOAA/GOES-R programs. The GEONEX pipeline has been deployed on Amazon Web Services cloud platform and it currently leverages near-realtime geostationary data hosted in AWS public datasets under a NOAA-AWS agreement. Initial analyses of various products from ABI/AHI sensors suggest that they are comparable to those from MODIS in representing the spatio-temporal dynamics of land conditions. Cloud computing offers a variety of options for deploying the GEONEX pipeline including choice CPUs, storage media, and automation. By making the GEONEX pipeline available on the cloud, we hope to engage a broad community of Earth scientists from around the world in utilizing this new source of data for Earth monitoring.

Nemani, Ramakrishna R.↗

Earth Observations from Geostationary Satellites

The latest generation of geostationary satellites carry sensors such as the Advanced Baseline Imager (GOES-16/17) and the Advanced Himawari Imager (Himawari-8/9) that closely mimic the spatial and spectral characteristics of MODIS and VIIRS, useful for monitoring land surface conditions. The NASA Earth Exchange (NEX) team at Ames Research Center has embarked on a collaborative effort among scientists from NASA and NOAA exploring the feasibility of producing operational land surface products similar to those from MODIS/VIIRS. The team built a processing pipeline called GeoNEX that is capable of converting raw geostationary data into routine products of Fires, surface reflectances, vegetation indices, LAI/FPAR, ET and GPP/NPP using algorithms adapted from both NASA/EOS and NOAA/GOES-R programs. The GeoNEX pipeline has been deployed on Amazon Web Services cloud platform and it currently leverages near-realtime geostationary data hosted in AWS public datasets under a NOAA-AWS agreement. Initial analyses of various products from ABI/AHI sensors suggest that they are comparable to those from MODIS in representing the spatio-temporal dynamics of land conditions. Cloud computing offers a variety of options for deploying the GeoNEX pipeline including choice CPUs, storage media, and automation. By making the GEONEX pipeline available on the cloud, we hope to engage a broad community of Earth scientists from around the world in utilizing this new source of data for Earth monitoring.

Earth↗

GeoNEX: Land Monitoring from a New Generation of Geostationary Sensors

The latest generation of geostationary satellites carry sensors such as the Advanced Baseline Imager (GOES-16/17) and the Advanced Himawari Imager (Himawari-8/9) that closely mimic the spatial and spectral characteristics of MODIS and VIIRS, useful for monitoring land surface conditions. The NASA Earth Exchange (NEX) team at Ames Research Center has embarked on a collaborative effort among scientists from NASA and NOAA exploring the feasibility of producing operational land surface products similar to those from MODIS/VIIRS. The team built a processing pipeline called GEONEX that is capable of converting raw geostationary data into routine products of Fires, surface reflectances, vegetation indices, LAI/FPAR, ET and GPP/NPP using algorithms adapted from both NASA/EOS and NOAA/GOES-R programs. The GEONEX pipeline has been deployed on Amazon Web Services cloud platform and it currently leverages near-realtime geostationary data hosted in AWS public datasets under a NOAA-AWS agreement. Initial analyses of various products from ABI/AHI sensors suggest that they are comparable to those from MODIS in representing the spatio-temporal dynamics of land conditions. Cloud computing offers a variety of options for deploying the GEONEX pipeline including choice CPUs, storage media, and automation. By making the GEONEX pipeline available on the cloud, we hope to engage a broad community of Earth scientists from around the world in utilizing this new source of data for Earth monitoring.

GeoNEX↗

Influence of dissolved organic materials on turbid water optical properties and remote-sensing reflectance

The effects of dissolved organic materials on turbid-water optical properties are assessed, by means of field measurements and laboratory simulations in which upwelled reflectance, attenuation, absorption, and backscatter spectral properties at wavelengths from 450 to 800 nm are examined in relation to water chemistry. The data show that dissolved organic materials decrease upwelled reflectance from turbid waters, and that the decrease in reflectance is a nonlinear function of concentration with the largest gradients at low carbon concentrations, depending on wavelength. Upwelled reflectance is found to be highly correlated with two backscatter-absorption parameters used in some optical models, which are nonlinear with dissolved organic material concentration change.

Witte, W. G.↗

Bistatic radar measurements of the surface of Mars with Mariner 1969.

The detection of echoes produced by oblique reflection of the RF (2300 MHz) spacecraft carrier from the Martian surface as Mariner 6 and 7 flew behind Mars in 1969, is described. Changes in echo center frequency and bandwidth are utilized to study the radius and roughness of the surface along a quasi-specular radar track that led from an optically dark and densely cratered region of Meridiani Sinus over into a smoother and brighter looking area of Thymiamata. A 3 to 1 decrease in surface roughness of large size compared to the wavelength (13 cm) was observed as the reflecting zone moved across the boundary between these two regions. The average radius obtained along the track was 3393 plus or minus 3 km. Due to large angles of incidence (86 to 90 deg), and surface shadowing, the data are not suitable for mapping the reflection coefficient of the surface material.

Fjeldbo, G.↗

Announcing the Availability of the MIT SMASS and SMASSIR Data Sets

We announce the release of visible and near-infrared reflectance spectroscopy measurements for nearly 2000 asteroids obtained by the MIT Small Main-Belt Asteroid Spectroscopic Survey (SMASS) program. Data are being released via http://smass.mit.edu. Additional information is contained in the original extended abstract.

Binzel, R. P.↗

Remote sensing of temperate coniferous forest lead area index - The influence of canopy closure, understory vegetation and background reflectance

Consideration is given to the effects of canopy closure, understory vegetation, and background reflectance on the relationship between Landsat TM data and the leaf area index (LAI) of temperate coniferous forests in the western U.S. A methodology for correcting TM data for atmospheric conditions and sun-surface-sensor geometry is discussed. Strong inverse curvilinear relationships were found between coniferous forest LAI and TM bands 3 and 5. It is suggested that these inverse relationships are due to increased reflectance of understory vegetation and background in open stands of lower LAI and decreased reflectance of the overstory in closed canopy stands with higher LAI.

Spanner, Michael A.↗

Goniometric observations of light scattered from soils and leaves

The laboratory established at NASA-Goddard to measure and model the light-scattering properties of soil samples and individual plant leaves employs two goniometers: one for the measurement of directional reflectance and transmittance from vertically-mounted leaf samples, and the other for measurement of directional reflectance from such horizontal, semiinfinite particulate surfaces as soil samples. Sample observations of various soil minerals and plant leaves are presented; these goniometric data are compared to the results of a reflectance model from particulate surfaces and those of a ray-tracing model of leaf reflectance and transmittance.

Kestner, Joann M.↗

Reanalysis of Mariner 9 UV spectrometer data for ozone, cloud, and dust abundances, and their interaction over climate timescales

Research activities to date are discussed. Selected Mariner 9 UV spectra were obtained. Radiative transfer models were updated and then exercised to simulate spectra. Simulated and observed spectra compare favorably. It is noted that large amounts of ozone are currently not retrieved with reflectance spectroscopy, raising large doubts about earlier published ozone abundances. As these published abundances have been used as a benchmark for all theoretical photochemical models of Mars, this deserves further exploration. Three manuscripts were published, and one is in review. Papers were presented and published at three conferences, and are planned for five more conferences in the next six months. The research plan for the next reporting period is discussed and involves continuing studies of reflectance spectroscopy, further examination of Mariner 9 data, and climate change studies of ozone.

Lindner, Bernhard Lee↗

Reflectance spectra for sodium and potassium doped ammonia frosts - Implications for Io's surface

This paper reports measurements of the reflection spectra of sodium- and potassium-doped ammonia frosts as a function of alkali metal concentration for the wavelength range 0.35-2.5 microns. The purpose of the measurements was to determine whether or not the reflection spectra for such a solid was compatible with the spectra albedo of Io. The data show that, with a sufficiently large alkali metal concentration, the reflection spectra of the doped ammonia frosts do not display the characteristic ammonia features at 2.0 and 2.25 micron. The high reflectance of the more concentrated samples and the character of the observed reflection spectrum make it difficult to rule out sodium-doped ammonia frost as a surface constituent on Io on the basis of existing data.

Rosen, M. D. A.↗

Using Leaf Chlorophyll to Parameterize Light-Use-Efficiency Within a Thermal-Based Carbon, Water and Energy Exchange Model

Chlorophylls absorb photosynthetically active radiation and thus function as vital pigments for photosynthesis, which makes leaf chlorophyll content (C(sub ab) useful for monitoring vegetation productivity and an important indicator of the overall plant physiological condition. This study investigates the utility of integrating remotely sensed estimates of C(sub ab) into a thermal-based Two-Source Energy Balance (TSEB) model that estimates land-surface CO2 and energy fluxes using an analytical, light-use-efficiency (LUE) based model of canopy resistance. The LUE model component computes canopy-scale carbon assimilation and transpiration fluxes and incorporates LUE modifications from a nominal (species-dependent) value (LUE(sub n)) in response to short term variations in environmental conditions, However LUE(sub n) may need adjustment on a daily timescale to accommodate changes in plant phenology, physiological condition and nutrient status. Day to day variations in LUE(sub n) were assessed for a heterogeneous corn crop field in Maryland, U,S.A. through model calibration with eddy covariance CO2 flux tower observations. The optimized daily LUE(sub n) values were then compared to estimates of C(sub ab) integrated from gridded maps of chlorophyll content weighted over the tower flux source area. The time continuous maps of daily C(sub ab) over the study field were generated by focusing in-situ measurements with retrievals generated with an integrated radiative transfer modeling tool (accurate to within +/-10%) using at-sensor radiances in green, red and near-infrared wavelengths acquired with an aircraft imaging system. The resultant daily changes in C(sub ab) within the tower flux source area generally correlated well with corresponding changes in daily calibrated LUE(sub n) derived from the tower flux data, and hourly water, energy and carbon flux estimation accuracies from TSEB were significantly improved when using C(sub ab) for delineating spatio-temporal variations in LUE(sub n). The results demonstrate the synergy between thermal infrared and shortwave reflective wavebands in producing valuable remote sensing data for operational monitoring of carbon and water fluxes.

Houlborg, Rasmus↗

Task 10: an ERTS Experiment for Mapping Iron Compounds, 1383

The author has identified the following significant results. Preliminary results of a spectral ratioing technique are shown for a region at the southern end of the Wind River Range, Wyoming. Digital ratio graymaps and analog ratio images have been produced for the test site, but ground truth is not yet available for thorough interpretation of these products. ERTS-1 analog ratio images were found generally better than either ERTS-1 single channel images or high altitude aerial photos for the discrimination of vegetation from non-vegetation in the test site region. Some linear geological features smaller than the ERTS-1 spatial resolution are seen as well in ERTS-1 ratio and single channel images as in high altitude aerial photography. Geochemical information appears to be extractable from ERTS-1 data. Good preliminary quantitative agreement between ERTS-1 derived ratios and laboratory derived reflectance ratios of rocks and minerals encourage plans to use lab data as training sets for a simple ratio gating logic approach to automatic recognition maps. Empirical atmospheric corrections indicate that atmospheric corrections are needed to make the ratio method, and possibly other types of data processing, consistent over large geographical and temporal displacements.

Vincent, R. K.↗

Experimental Water Droplet Impingement Data on Airfoils, Simulated Ice Shapes, an Engine Inlet and a Finite Wing

An experimental method has been developed to determine the water droplet impingement characteristics on two- and three-dimensional aircraft surfaces. The experimental water droplet impingement data are used to validate particle trajectory analysis codes that are used in aircraft icing analyses and engine inlet particle separator analyses. The aircraft surface is covered with thin strips of blotter paper in areas of interest. The surface is then exposed to an airstream that contains a dyed-water spray cloud. The water droplet impingement data are extracted from the dyed blotter paper strips by measuring the optical reflectance of each strip with an automated reflectometer. Experimental impingement efficiency data represented for a NLF (1)-0414 airfoil, a swept MS (1)-0317 airfoil, a Boeing 737-300 engine inlet model, two simulated ice shapes and a swept NACA 0012 wingtip. Analytical impingement efficiency data are also presented for the NLF (1)-0414 airfoil and the Boeing 737-300 engine inlet model.

Papadakis, M.↗

Estimations of the Global Distribution and Time Series of UV Noontime Irradiance (305, 310, 324, 380 nm, and Erythemal) from TOMS and SeaWiFS Data

The amount of UV irradiance reaching the Earth's surface is estimated from the measured cloud reflectivity, ozone, aerosol amounts, and surface reflectivity time series from 1980 to 1992 and 1997 to 2000 to estimate changes that have occurred over a 21-year period. Recent analysis of the TOMS data shows that there has been an apparent increase in reflectivity (decrease in W) in the Southern Hemisphere that is related to a calibration error in EP-TOMS. Data from the well-calibrated SeaWiFS satellite instrument have been used to correct the EP-TOMS reflectivity and UV time series. After correction, some of the local trend features seen in the N7 time series (1980 to 1992) have been continued in the combined time series, but the overall zonal average and global trends have changed. In addition to correcting the EP-TOMS radiance calibration, the use of SeaWiFS cloud data permits estimation of UV irradiance at higher spatial resolution (1 to 4 km) than is available from TOMS (100 km) under the assumption that ozone is slowly varying over a scale of 100 km. The key results include a continuing decrease in cloud cover over Europe and North America with a corresponding increase in UV and a decrease in UV irradiance near Antarctica.

Herman, J.↗