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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 1,729 records · Page 96

Enabling the broader adoption of fusion simulation on complex geometry

This project addressed a key barrier to advanced fusion and nuclear simulation: the difficulty of performing high-fidelity Monte Carlo neutronics directly on complex, real-world CAD geometry. Traditional workflows require engineers to rebuild CAD models as simplified constructive solid geometry, a time-consuming and error-prone process that limits design iteration and broader adoption of simulation tools. The goal of this Phase I SBIR was to make CAD-based neutronics practical, accessible, and robust for industrial and research users. During the project, Coreform significantly enhanced the Direct Accelerated Geometry Monte Carlo (DAGMC) workflow and fully integrated it into Coreform Cubit as a first-class capability. Major achievements include optimized material assignment and surface meshing workflows, substantial performance improvements to geometry imprinting and preparation, native export of DAGMC models, and new visualization tools to support OpenMC source definition and lost-particle debugging. Coreform also expanded Cubit’s capabilities as a full OpenMC preprocessor, including the ability to convert OpenMC constructive solid geometry models back into CAD for visualization, multiphysics coupling, and debugging. In collaboration with Argonne National Laboratory, the project delivered comprehensive new DAGMC documentation and training materials, transforming DAGMC from a research-oriented tool into a production-ready workflow. Results were disseminated through tutorials, conference training, and multiple well-attended webinars demonstrating integrated CAD-based neutronics and multiphysics workflows. Overall, this project demonstrated that high-fidelity Monte Carlo simulations can be performed directly on complex CAD geometry, reducing setup time, improving usability, and enabling faster, more informed design decisions for fusion and nuclear energy systems.

42 ENGINEERING↗

Reflections on the role of MOOSE in Unleashing a Golden Era of American Energy Innovation

As the use of artificial intelligence spreads across most professions, projections for the expected energy consumption of these virtual assistants/workers dictate a large increase in energy production. Recent published estimates refer to up to a necessary tripling of nuclear energy production~\cite{iaea}. % TODO add citations This is supported by the new administration, calling on February 5th to "unleash Commercial Nuclear Power in the United States" and to launch the "long-awaited American nuclear renaissance"~\cite{doe-order}. The Department of Energy (DOE) is tasked with "enabl[ing] the rapid deployment and export of next generation nuclear technology". In terms of research of development, we must seek to "unleash American Energy Innovation", by "focus[ing] our time and resources on technologies that will advance basic science, grow America’s scientific leadership, reduce costs for American families [...]". To that end, the Department will "prioritize affordable, reliable, and secure energy technologies, including fossil fuels, advanced nuclear, geothermal, and hydropower." Following this call to action, we elect to examine the role of the open-source Multiphysics Object Oriented Simulation Environment (MOOSE)~\cite{moose3} in meeting the stated goals.

22 - GENERAL STUDIES OF NUCLEAR REACTORS↗

CiteSoft_Py

There is a need to provide a way for dev-users (Scientists, Engineers, and other Software Developers) to get credit (citations) when they contribute to an important software package - particularly a large package that is already established. Various solutions (including cross package) solutions do exist, but a simple standard format that can work between multiple packages and multiple languages in a modular way is not widely available. CiteSoft_py is a python implementation of CiteSoft. CiteSoft is a plain text standard consisting of a format and a protocol that exports the citations for the end-users for whichever softwares they have used. CiteSoft has been designed so that software dev-users can rely upon it regardless of coding language or platform, and even for cases where multiple codes are working in a coupled manner. The CiteSoft_py implementation includes python decorators to make wrappers for facile use. The purpose is that when dev-users (scientists, engineers and professional programmers) contribute to a collaborative software project, that the appropriate citations (e.g., journal article, conference proceeding) are provided to the end-user. The end-user does not need to know how to use a command line interface, API, etc.

Savara, Aditya↗

CAS Operator Training Simulator

SAND2022-1525 O The Central Alarm System (CAS) training simulator is a standalone application that will work on any Alarm Control and Display (AC&D) System. Designed to be used by an instructor in a classroom environment, this software plays back scenario alarms and videos usually exported out of Scribe3D or any software that can produce scenario-based videos. Users can select from an array of different scenarios to play. The alarms are sent to an AC&D controller and the videos are sent to a Video Management Server (VMS). Both alarms and associated videos displayed by the intended AC&D system. Sandia National Laboratories is a multimission laboratory managed and operated by National Technology & Engineering Solutions of Sandia, LLC, a wholly owned subsidiary of Honeywell International Inc., for the U.S. Department of Energy’s National Nuclear Security Administration under contract DE-NA0003525.

Le, Tam↗

Chemostatic concentration–discharge behaviour observed in a headwater catchment underlain with discontinuous permafrost

Concentration–discharge dynamics were evaluated in a small (~ 2.25 km2) headwater catchment underlain with discontinuous permafrost on the Seward Peninsula of western Alaska. A large storm, during which 48 mm of rain fell over a 24-h period, enabled the evaluation of solute concentration–discharge response to a sizeable hydrological event, while water stable isotopes enabled an appraisal of the contributions of event water. Under normal catchment conditions, chemostatic behaviour was observed for solutes typically derived from mineral weathering (e.g. calcium, magnesium, sodium and silica). The chemostatic behaviour observed for most solutes under normal catchment conditions indicated that catchment storage and residence times are sufficiently long for many solute generating reactions to approach equilibrium. Following the storm however, most solutes exhibited dilutive and highly variable behaviour. This likely indicated the exceedance of a discharge threshold where chemostatic behaviour could no longer be maintained for most solutes. Dissolved organic carbon and silica were the only solutes monitored to exhibit chemostatic behaviour during all time periods.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Cytoplasmic Amplification of Transcriptional Noise Generates Substantial Cell-to-Cell Variability

Transcription is an episodic process characterized by probabilistic bursts, but how the transcriptional noise from these bursts is modulated by cellular physiology remains unclear. Using simulations and single-molecule RNA counting, we examined how cellular processes influence cell-to-cell variability (noise). The results show that RNA noise is higher in the cytoplasm than the nucleus in ~85% of genes across diverse promoters, genomic loci, and cell types (human and mouse). Measurements also show further amplification of RNA noise in the cytoplasm, fitting a model of biphasic mRNA conversion between translation- and degradation-competent states. This multi-state translation-degradation of mRNA also causes substantial noise amplification in protein levels, ultimately accounting for ~74% of intrinsic protein variability in cell populations. Overall, the results demonstrate how noise from transcriptional bursts is intrinsically amplified by mRNA processing, leading to a large super-Poissonian variability in protein levels.

59 BASIC BIOLOGICAL SCIENCES↗

CO2 partial pressure and fluxes in the Amazon River Plume using in situ and remote sensing data

Estimations of the global carbon budget include a quantitative understanding of the evolving processes that occur along river-to-ocean gradients. However, high spatiotemporal resolution observations of these processes are limited. Here we present in situ measurements of the partial pressure of CO2 (pCO2) made through the Amazon River plume (ARP) during different discharge seasons, from 2010-2012. We evaluated the spatiotemporal distribution of pCO2 using Soil Moisture and Ocean Salinity (SMOS) satellite observations for each hydrologic period in the ARP. Regression models were used to estimate pCO2 at the ARP for the period of 2010-2014. From these distributions we calculated sea-air gas exchange of CO2 between the plume waters and the atmosphere (F_co2^sea). Intra-annual variability of F_co2^sea was related to discharge at the river mouth and ocean currents as well as trade winds in the plume. Climatic events during the study period had a significant impact on the F_co2^sea. Including the plume area closer to the river mouth makes the ARP a net source of CO2 with an annual net sea-air flux of 8.6 ±7.1 Tg C y-1 from 2011-2014.

Amazon↗

Structural Variability of EspG Chaperones from Mycobacterial ESX-1, ESX-3, and ESX-5 Type VII Secretion Systems

Type VII secretion systems (ESX) are responsible for transport of multiple proteins in mycobacteria. How different ESX systems achieve specific secretion of cognate substrates remains elusive. In the ESX systems, the cytoplasmic chaperone EspG forms complexes with heterodimeric PE–PPE substrates that are secreted from the cells or remain associated with the cell surface. Here we report the crystal structure of the EspG 1 chaperone from the ESX-1 system determined using a fusion strategy with T4 lysozyme. EspG 1 adopts a quasi 2-fold symmetric structure that consists of a central β-sheet and two α-helical bundles. In addition, we describe the structures of EspG 3 chaperones from four different crystal forms. Alternate conformations of the putative PE–PPE binding site are revealed by comparison of the available EspG 3 structures. Analysis of EspG 1 , EspG 3 , and EspG 5 chaperones using small-angle X-ray scattering reveals that EspG 1 and EspG 3 chaperones form dimers in solution, which we observed in several of our crystal forms. Finally, we propose a model of the ESX-3 specific EspG 3 –PE5–PPE4 complex based on the small-angle X-ray scattering analysis.

59 BASIC BIOLOGICAL SCIENCES↗

Initiation and Development of Wetlands in Southern Florida Karst Landscape Associated With Accumulation of Organic Matter and Vegetation Evolution

Biological processes can exert important controls on geomorphic evolution in karst landscapes, because carbonate mineral dissolution is augmented and spatially focused by the production of CO 2 and biogenic acids from organic matter (OM) decomposition. In Big Cypress National Preserve (BICY) in southwest Florida (USA), depressional wetlands embedded in a mosaic of pine uplands exhibit regular patterning. To understand the impact of OM decomposition as well as different OM sources on carbonate dissolution and landscape patterning, we measured bulk OM property and biomarker proxies (fatty acids and lignin phenols) in different zones (center vs. edge) of the depressional wetlands. We also constructed age profiles of sediment accretion and pattern genesis using 210Pb activities and compound- specific radiocarbon analysis (CSRA) of long-chain fatty acids. Bulk OM and biomarker data indicate rapid OM accumulation in wetland centers resulting from high primary production and near permanent inundation, in contrast to negligible OM accumulation at wetland edges. Age discontinuities suggest episodic periods of near complete OM loss due to decomposition and/or fire. Based on CSRA, landscape patterning likely initiated in the mid-to-late Holocene, with wetlands at slight higher elevation initiated earlier than wetlands at lower elevation. Bulk stable isotope and lignin phenol biomarkers indicate wetland vegetation was initially dominated by herbaceous species and shifted to woody dominated vegetation as landscape hydrology adjusted to changing precipitation. The rate of weathering is likely impacted by hydrological conditions, vegetation dynamics and environmental perturbations like precipitation and fires, suggesting that this karst landscape is a manifestation of complex ecosystem feedbacks.

54 ENVIRONMENTAL SCIENCES↗

Manganese Limitation of Phytoplankton Physiology and Productivity in the Southern Ocean

Although iron and light are understood to regulate the Southern Ocean biological carbon pump, observations have also indicated a possible role for manganese. Low concentrations in Southern Ocean surface waters suggest manganese limitation is possible, but its spatial extent remains poorly constrained and direct manganese limitation of the marine carbon cycle has been neglected by ocean models. Here, using available observations, we develop a new global biogeochemical model and find that phytoplankton in over half of the Southern Ocean cannot attain maximal growth rates because of manganese deficiency. Manganese limitation is most extensive in austral spring and depends on phytoplankton traits related to the size of photosynthetic antennae and the inhibition of manganese uptake by high zinc concentrations in Antarctic waters. Importantly, manganese limitation expands under the increased iron supply of past glacial periods, reducing the response of the biological carbon pump. Overall, these model experiments describe a mosaic of controls on Southern Ocean productivity that emerge from the interplay of light, iron, manganese and zinc, shaping the evolution of Antarctic phytoplankton since the opening of the Drake Passage.

54 ENVIRONMENTAL SCIENCES↗

Virioplankton Assemblage Structure in the Lower River and Ocean Continuum of the Amazon

ABSTRACT The Amazon River watershed and its associated plume comprise a vast continental and oceanic area. The microbial activities along this continuum contribute substantially to global carbon and nutrient cycling, and yet there is a dearth of information on the diversity, abundance, and possible roles of viruses in this globally important river. The aim of this study was to elucidate the diversity and structure of virus assemblages of the Amazon River-ocean continuum. Environmental viral DNA sequences were obtained for 12 locations along the river’s lower reach ( n = 5) and plume ( n = 7). Sequence assembly yielded 29,358 scaffolds, encoding 82,546 viral proteins, with 15 new complete viral genomes. Despite the spatial connectivity mediated by the river, virome analyses and physical-chemical water parameters clearly distinguished river and plume ecosystems. Bacteriophages were ubiquitous in the continuum and were more abundant in the transition region. Eukaryotic viruses occurred mostly in the river, while the plume had more viruses of autotrophic organisms ( Prochlorococcus , Synechococcus ) and heterotrophic bacteria ( Pelagibacter ). The viral families Microviridae and Myoviridae were the most abundant and occurred throughout the continuum. The major functions of the genes in the continuum involved viral structures and life cycles, and viruses from plume locations and Tapajós River showed the highest levels of functional diversity. The distribution patterns of the viral assemblages were defined not only by the occurrence of possible hosts but also by water physical and chemical parameters, especially salinity. The findings presented here help to improve understanding of the possible roles of viruses in the organic matter cycle along the river-ocean continuum. IMPORTANCE The Amazon River forms a vast plume in the Atlantic Ocean that can extend for more than 1,000 km. Microbial communities promote a globally relevant carbon sink system in the plume. Despite the importance of viruses for the global carbon cycle, the diversity and the possible roles of viruses in the Amazon are poorly understood. The present work assesses, for the first time, the abundance and diversity of viruses simultaneously in the river and ocean in order to elucidate their possible roles. DNA sequence assembly yielded 29,358 scaffolds, encoding 82,546 viral proteins, with 15 new complete viral genomes from the 12 river and ocean locations. Viral diversity was clearly distinguished by river and ocean. Bacteriophages were the most abundant and occurred throughout the continuum. Viruses that infect eukaryotes were more abundant in the river, whereas phages appeared to have strong control over the host prokaryotic populations in the plume.

Amazon↗

Beyond Compliance: Integrating Nonproliferation into Corporate Sustainability

This paper investigates nonproliferation as a potential corporate sustainability value. It reviews the history of corporate sustainability, builds the case for nonproliferation as a sustainability value, and develops recommendations for the integration of nonproliferation into the frameworks of sustainability.

export control↗

Geothermal Case Studies

The US Geological Survey (USGS) resource assessment (Williams et al., 2009) outlined a mean 30GWe of undiscovered hydrothermal resource in the western US. One goal of the Geothermal Technologies Office (GTO) is to accelerate the development of this undiscovered resource. The Geothermal Technologies Program (GTP) Blue Ribbon Panel (GTO, 2011) recommended that DOE focus efforts on helping industry identify hidden geothermal resources to increase geothermal capacity in the near term. Increased exploration activity will produce more prospects, more discoveries, and more readily developable resources. Detailed exploration case studies akin to those found in oil and gas (e.g. Beaumont, et al, 1990) will give operators a single point of information to gather clean, unbiased information on which to build geothermal drilling prospects. To support this effort, the National Renewable Energy laboratory (NREL) has been working with the Department of Energy (DOE) to develop a template for geothermal case studies on the Geothermal Gateway on OpenEI. In fiscal year 2013, the template was developed and tested with two case studies: Raft River Geothermal Area (http://en.openei.org/wiki/Raft_River_Geothermal_Area) and Coso Geothermal Area (http://en.openei.org/wiki/Coso_Geothermal_Area). In fiscal year 2014, ten additional case studies were completed, and additional features were added to the template to allow for more data and the direct citations of data. The template allows for: Data - a variety of data can be collected for each area, including power production information, well field information, geologic information, reservoir information, and geochemistry information. Narratives ? general (e.g. area overview, history and infrastructure), technical (e.g. exploration history, well field description, R&D activities) and geologic narratives (e.g. area geology, hydrothermal system, heat source, geochemistry.) Exploration Activity Catalog - catalog of exploration activities conducted in the area (with dates and references.) NEPA Analysis ? a query of NEPA analyses conducted in the area (that have been catalogued in the OpenEI NEPA database.) In fiscal year 2015, NREL is working with universities to populate additional case studies on OpenEI. The goal is to provide a large enough dataset to start conducting analyses of exploration programs to identify correlations between successful exploration plans for areas with similar geologic occurrence models.

15 GEOTHERMAL ENERGY↗