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DOE OSTI2021

Spatial biases of information influence global estimates of soil respiration: how can we improve global predictions?

Soil respiration (Rs), the efflux of CO2 from soils to the atmosphere, is a major component of the terrestrial carbon cycle, but is poorly constrained from regional to global scales. The global soil respiration database (SRDB) is a compilation of in-situ Rs observations from around the globe that has been consistently updated with new measurements over the past decade. It is unclear whether the addition of data to new versions of the SRDB has produced better-constrained global Rs estimates. We compared two versions of the SRDB (v3.0 n=5173 and v5.0 n=10366) to determine how additional data influenced the global sum and uncertainty of Rs as predicted by a quantile regression forest model. A model parameterized using SRDBv3 yielded a global Rs sum of 88.6 Pg C yr-1, and associated uncertainty of 29.9 (mean absolute error) and 57.9 (standard deviation) Pg C yr-1, whereas parameterization using SRDBv5 yielded 96.5 Pg C yr-1 and associated uncertainty of 30.2 (mean average error) and 73.4 (standard deviation) Pg C yr-1. Empirically estimated global heterotrophic respiration (Rh) from v3 and v5 were 49.9-50.2 (mean 50.1) and 53.3-53.5 (mean 53.4) Pg C yr-1, respectively. Interestingly, SRDBv5’s inclusion of new data from underrepresented regions (e.g., Asia, Africa, South America) thus resulted in overall higher model uncertainty. The SRDBv5 is still biased towards northern latitudes and temperate zones, so we tested that an optimized global distribution of Rs measurements resulted in a global sum of 96.4 ± 21.4 Pg C yr-1 and lower model uncertainty. These results support current global estimates of Rs but highlight spatial inconsistencies that influence model parameterization and interpretation that should be addressed to improve regional- to global-scale predictions.

Stell, Emma↗
DOE OSTI2023

Anoxia begets anoxia: A positive feedback to the deoxygenation of temperate lakes

Abstract Declining oxygen concentrations in the deep waters of lakes worldwide pose a pressing environmental and societal challenge. Existing theory suggests that low deep‐water dissolved oxygen (DO) concentrations could trigger a positive feedback through which anoxia (i.e., very low DO) during a given summer begets increasingly severe occurrences of anoxia in following summers. Specifically, anoxic conditions can promote nutrient release from sediments, thereby stimulating phytoplankton growth, and subsequent phytoplankton decomposition can fuel heterotrophic respiration, resulting in increased spatial extent and duration of anoxia. However, while the individual relationships in this feedback are well established, to our knowledge, there has not been a systematic analysis within or across lakes that simultaneously demonstrates all of the mechanisms necessary to produce a positive feedback that reinforces anoxia. Here, we compiled data from 656 widespread temperate lakes and reservoirs to analyze the proposed anoxia begets anoxia feedback. Lakes in the dataset span a broad range of surface area (1–126,909 ha), maximum depth (6–370 m), and morphometry, with a median time‐series duration of 30 years at each lake. Using linear mixed models, we found support for each of the positive feedback relationships between anoxia, phosphorus concentrations, chlorophyll a concentrations, and oxygen demand across the 656‐lake dataset. Likewise, we found further support for these relationships by analyzing time‐series data from individual lakes. Our results indicate that the strength of these feedback relationships may vary with lake‐specific characteristics: For example, we found that surface phosphorus concentrations were more positively associated with chlorophyll a in high‐phosphorus lakes, and oxygen demand had a stronger influence on the extent of anoxia in deep lakes. Taken together, these results support the existence of a positive feedback that could magnify the effects of climate change and other anthropogenic pressures driving the development of anoxia in lakes around the world.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2019

Climatic impact, future biomass production, and local adaptation of four switchgrass cultivars

Abstract Previous studies have shown that switchgrass has a wide range of genetic variation and that productivity is linked to local adaptation to the location of origin for many cultivars. In this meta‐analysis, we compiled and analyzed 900 observations associated with 41 field trials for four switchgrass cultivars (two lowlands, Alamo and Kanlow, and two uplands, Cave‐In‐Rock and Shelter). This extensive dataset and machine learning were used to identify the most influential variables impacting switchgrass productivity, to search for evidence of local adaptation to each cultivar's location of origin, and to predict change in productivity under future climate for each cultivar. In general, variables associated with climate and management are more important predictors of productivity relative to soil variables. Three climatic variables, annual mean temperature, annual precipitation, and precipitation in the wettest month, are identified as key environmental variables for productivity of all cultivars. Productivity under future climate (2041–2060) is predicted to stay stable for all cultivars relative to the prediction under current climate (1986–2005) across all trial locations and over a 20‐year simulation period. However, the productivity of each cultivar varies from location to location and from year to year, although productivity varies more between locations than between years. Additionally, we observe shifts in the most productive cultivar at the local field scale depending on the combination of management practice and climates. The shape of the relationship between productivity and the annual mean temperature relative to the cultivar's location of origin is a bell‐shaped curve for Kanlow, Cave‐in‐Rock, and Shelter, indicative of local adaptation. Identifying influential environmental variables and their relationships to productivity with respect to cultivar's location of origin help predicting productivity on the local field scale, and will help with the biofuel production planning through the selection of suitable cultivars for different locations under climate changes.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2018

Tree cover shows strong sensitivity to precipitation variability across the global tropics

Abstract Aim Vegetation is sensitive to mean annual precipitation (MAP), but the sensitivity of vegetation to precipitation variability (PV) is less clear. Tropical ecosystems are likely to experience increased PV in the future. Here we assessed the importance, magnitude and mechanism of PV effects on tree cover in the context of covarying environmental drivers such as fire, temperature and soil properties. Location Tropical land. Time period 2000–2010. Major taxa studied Trees. Methods We compiled climate, soil and remotely‐sensed tree cover data over tropical land. We then comprehensively assessed the contribution of PV at different time‐scales to tropical tree cover variations and estimated the sensitivity of tree cover to PV changes by conducting rolling‐window regression and variance decomposition analyses. We further adopted a mechanistic modelling approach to test whether water competition between trees and grasses can explain the observed effect of PV. Results We find that PV contributes 33–56% to the total explained spatial variation (65–79%) in tree cover. The contribution of PV depends on MAP and is highest under intermediate MAP (500–1,500 mm). Tree cover generally increases with rainy day frequency and wet season length but shows mixed responses to inter‐annual PV. Based on the estimated sensitivity, tropical tree cover can decrease by 3–5% overall and by up to 20% in Amazonia under a 20% decrease in rainy days. Mechanistic modelling analysis reproduced the continental differences in tree cover along an MAP gradient. Main conclusions Under intermediate rainfall regimes (500–1,500 mm), PV can be a more important determinant of tropical tree cover than conventionally proposed drivers such as MAP and fire. The effect of PV likely results from the sensitivity of tree–grass competition to the temporal distribution of water resources. These results show that climate variability can strongly shape the biosphere.

Xu, Xiangtao↗
DOE OSTI2018

Traditional plant functional groups explain variation in economic but not size-related traits across the tundra biome

Aim: Plant functional groups are widely used in community ecology and earth system modelling to describe trait variation within and across plant communities. However, this approach rests on the assumption that functional groups explain a large proportion of trait variation among species. We test whether four commonly used plant functional groups represent variation in six ecologically important plant traits. Location: Tundra biome. Time period: Data collected between 1964 and 2016. Major taxa studied: 295 tundra vascular plant species. Methods: We compiled a database of six plant traits (plant height, leaf area, specific leaf area, leaf dry matter content, leaf nitrogen, seed mass) for tundra species. We examined the variation in species-level trait expression explained by four traditional functional groups (evergreen shrubs, deciduous shrubs, graminoids, forbs), and whether variation explained was dependent upon the traits included in analysis. We further compared the explanatory power and species composition of functional groups to alternative classifications generated using post-hoc clustering of species-level traits. Results: Traditional functional groups explained significant differences in trait expression, particularly among traits associated with resource economics, which were consistent across sites and at the biome scale. However, functional groups explained 19% of overall trait variation and poorly represented differences in traits associated with plant size. Post-hoc classification of species did not correspond well with traditional functional groups, and explained twice as much variation in species-level trait expression. Main conclusion: Traditional functional groups only coarsely represent variation in well-measured traits within tundra plant communities, and better explain resource economic traits than size-related traits. We recommend caution when using functional group approaches to predict tundra ecosystem change, or ecosystem functions relating to plant size, such as albedo or carbon storage. We argue that alternative classifications or direct use of specific plant traits could provide new insight for ecological prediction and modelling.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

Effects of nitrogen enrichment on tree carbon allocation: A global synthesis

Aim: Increased atmospheric nitrogen deposition may have profound effects on tree carbon allocation dynamics. However, a comprehensive understanding of how nitro-gen (N) enrichment influences carbon (C) allocation across plant functional processes and tree organs in individual trees remains elusive. Location: Global forest ecosystems. Time period: 1990–2018. Major taxa studied: Trees. Methods: We compiled data from 75 N addition experiments and conducted a meta-analysis to evaluate the responses of C source (photosynthesis), sinks (growth and respiration) and storage (non-structural carbohydrate concentrations) in different tree organs (foliage, above-ground wood and roots) to N enrichment. Results: N enrichment significantly enhanced C supply via photosynthesis (+39.6%, n = 128). C allocation to growth (biomass increment/production) significantly in-creased in foliage (+15.9%, n = 68) and above-ground wood (+31.8%, n = 64; bole, branch, stem and/or twig) with increasing N availability, but not in roots, whereas allocation increased in roots via increasing fine root turnover rate (+22.6%, n = 11). N fertilization significantly increased C allocation to respiration in above-ground wood (+46.6%, n = 12) and roots (+5.5%, n = 57), but not in foliage. N addition decreased non-structural carbohydrate (NSC) concentrations in foliage (-5.4%, n = 16) and roots (-5.0%, n = 21), but increased NSC in above-ground wood (+6.1%, n = 22). In addition, N enrichment effects were strongly affected by moderator variables. Main conclusions: Our results demonstrate that N addition increased C allocation to growth and respiration more strongly than C allocation to NSC storage, and increased C allocation to above-ground parts more strongly than to below-ground parts. Our results are useful for better understanding the response of tree functional processes at organ level to N enrichment. The existing data also reveal that more long-term ex-perimental studies on mature trees in tropical and boreal forests are urgently needed to provide a basis for forecasting tree responses to N enrichment at the global scale.

Li, Weibin↗
DOE OSTI2020

Drought shrinks terrestrial upland resilience to climate change

Abstract Aim Drought has been shown to alter terrestrial ecosystem carbon (C) and nitrogen (N) dynamics, and thus feedback to future climate. However, drought‐induced changes in terrestrial upland C and N pools and the drought response of soil carbon dioxide (CO 2 ) and nitrous oxide (N 2 O) fluxes are yet to be quantified. Location Global upland ecosystems. Time period 2000–2018. Major taxa studied Terrestrial C and N fluxes. Methods A meta‐analysis was conducted that compiled 1,344 measurements from 128 manipulative studies worldwide to obtain a general picture of terrestrial C and N cycling responses to soil drought stress and identify the primary driving factors. Results We showed that drought significantly decreased plant C pools, with stronger negative responses of aboveground than belowground C components. Drought significantly decreased soil respiration ( R S ) and N 2 O fluxes by 19% and 29%, respectively. There were non‐significant changes in soil organic C and N pools in response to drought; in contrast to a considerable decrease in soil dissolved organic C (−22%), there was a robust increase in soil nitrate‐N (26%) following short‐term drought impact. By relating net ecosystem productivity (NEP) to the difference between net primary production (NPP) and soil heterotrophic respiration ( R H ), drought was found to drive a decrease up to −37% in NEP, being equivalent to a reduction in terrestrial net C uptake of 2.91 t C/ha. Main conclusions Our study provides insights into soil release of CO 2 and N 2 O with a linkage to the changes in terrestrial C and N pools in response to drought across upland biomes. Our findings highlight that, despite the lowered soil C release rate, the capacity of upland biomes as a C sink to slow climate change would still be weakened due to a robust decline of plant‐derived C input to soil in a future drier climate.

Zheng, Yajing↗
DOE OSTI2018

High endemism of mosquitoes on São Tomé and Príncipe Islands: evaluating the general dynamic model in a worldwide island comparison

Abstract The archipelago of São Tomé and Príncipe is a major centre of endemism for vertebrates but, to date, arthropods remain poorly studied, with the exception of mosquitoes due to their medical and economic relevance. Previous studies, over 20 years old, recorded 26 species of mosquitoes for São Tomé and 14 for Príncipe, of which six and two were endemic to each island respectively. We collected mosquito larvae and adults on both islands and found three species as a first record, putting the number of mosquito species collected at least once on São Tomé at 29 and 15 for Príncipe. We compared the mosquito richness on São Tomé and Príncipe islands to 71 other oceanic islands represented within 20 archipelagoes worldwide. We used the general dynamic model of oceanic island biogeography and the associated ATT 2 (for Area+Time+Time 2 ) model to explain two different metrics: (i) the richness of the single‐island endemics and (ii) the richness of archipelago endemics. We also included other island characteristics in our model, such as isolation and latitude. Our data compilation and comparative analyses revealed an overall low richness of endemic mosquitoes on islands, with the highest number of single‐island endemics found on São Tomé Island. As predicted, we found a positive relationship between our two richness metrics and the general dynamic model ATT 2 , although the model with the area (A) alone also explained endemic richness. Isolation was also predictor of mosquito diversification.

Loiseau, Claire↗
DOE OSTI2017

A unified materials approach to mitigating optical nonlinearities in optical fiber. III. Canonical examples and materials road map

Abstract This paper, Part III in the Trilogy (Ballato, Cavillon, Dragic, 2018; Dragic, Cavillon, Ballato, et al ., 2018a,b), provides a road map for the development of simple core/clad optical fibers whose enhanced performance—in particular, marked reductions in optical nonlinearities—is achieved materially and not through the more conventional present routes of geometrically complex fiber design. More specifically, the material properties that give rise to Brillouin, Raman and Rayleigh scattering, transverse mode instabilities ( TMI ), and n 2 ‐mediated nonlinear effects are compiled and results on a wide range of optical fibers are discussed with a focus on trends in performance with glass composition. Furthermore, optical power scaling estimations as well as binary and ternary property diagrams associated with Rayleigh scattering, the Brillouin gain coefficient ( BGC ) and the thermo‐optic coefficient (d n /d T ) are developed and employed to graphically represent general trends with composition along with compositional targets for a single intrinsically low nonlinearity, silica‐based optical fiber that can achieve the power scaling goals of future high energy fiber laser applications. A foundational finding of this work is that the high‐silica content optical fibers fabricated using conventional chemical vapor deposition methods will not suffice to meet the power scaling demands of future high‐power and high‐energy fiber lasers.

36 MATERIALS SCIENCE↗
DOE OSTI2020

Method for estimating the density of high-level nuclear waste glass

A database of over 1100 silicate glass compositions and densities was compiled and used to evaluate the efficacy of an algorithm for estimating the density of silicate glass compositions. We sought to develop a parsimonious algorithm based on the additivity of partial molar volumes of individual oxide components weighted by their mole fraction in a glass composition. Bound molar volumes were used for oxides in which the density of the oxide bound in a glass matrix was previously determined. The bound molar volumes were known for oxides covering 97.5 mole percent of the database compositional space. The measured glass densities were plotted against the estimated glass densities and a linear regression yielded an R 2 adj. = 0.95 and a slope and intercept of approximately one and zero, respectively. This regression suggests that glass densities estimated by the algorithm, within analysis uncertainty, are equal to the measured densities of the glasses. In addition to the development of the density estimation, we corroborated many of the referenced bound molar volume data used in the parameterization of the estimation algorithm via linear regression of the individual partial molar volumes versus the inverse measured densities (specific volumes) of the glasses in the database.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗
DOE OSTI2026

Boron Coordination in Multicomponent Glasses: Analytical Models and Machine Learning With Uncertainty

Borosilicate glasses are extensively used in a variety of applications from kitchenware to nuclear waste immobilization due to the strong network formed by the Si-O-B bond that makes it resistant to chemical corrosion and gives it a low thermal expansion. Boron, however, exists in both trigonal BO3 and tetrahedral BO4 bonds in glass systems, which impacts the chemical durability and thermal resistance of the glass, amongst other properties. Boron coordination (N4), or the ratio of the amount of BO4 to BO3 within a glass, may aid in predicting these properties but is difficult to derive without experimental data due to the complexity of impacts from varied glass compositions and processing factors. For this reason, compositional models have been developed to predict boron coordination, but the models typically include a limited number of glass components. To help fill this gap in the models, in this work, a diverse multicomponent glass dataset of 809 glasses is compiled from a literature search, and then a number of analytical and machine learning (ML) models are trained on the dataset. Previously developed modified Bernstein and modified Du Stebbins analytical models were fitted to update parameters with the new dataset. Then, partially Bayesian neural networks, Gaussian process regressor, and heteroskedastic deterministic neural networks were evaluated. The ML models examined all have different strategies to overcome the potential for overfitting as a result of a limited training dataset, and return results that account for model uncertainty, which can be valuable for understanding model reliability. For the first time, cooling rate is introduced as an input parameter for ML models, showing consistent improvements in performance and solidifying the importance of including parameters outside of composition alone for N4 prediction. The machine learning models examined here show promise in accurate predictions of boron coordination in borosilicate glasses, all achieving R2 values of 0.91.

boron coordination↗
DOE OSTI2024

Holistic comparison of environmental barrier coating material candidates through design of a figure of merit

The first figure of merit for environmental barrier coating (EBC) materials was designed through a ranking system for material properties pertaining to established EBC failure modes in service. Seven past, present, and novel EBC candidate materials were used in the figure of merit design: SiO 2 , Ba 0.75 Sr 0.25 Al 2 Si 2 O 8 (BSAS), HfSiO 4 , Yb 2 Si 2 O 7 , Yb 2 SiO 5 , Yb 2 O 3 , and YbPO 4 . Utilizing compiled data from the literature, the presented figure of merit verified Yb 2 Si 2 O 7 as the state-of-the-art candidate with optimal EBC properties and inferred that YbPO 4 should be considered as a potentially viable EBC material candidate. Further, the figure of merit allows for a holistic comparison of EBC candidates and informs experimental and computational search efforts for next-generation complex EBCs. Clear knowledge gaps found through this work include CaO–MgO–Al 2 O 3 –SiO 2 (CMAS)-resistant coatings, EBC lifetimes before delamination, and oxidant diffusion rates in relevant EBC microstructures. It was shown that while some materials show promise for solving a single key failure mode for EBCs (i.e., CMAS reactivity), a community-wide goal should be placed on materials development to achieve acceptable resistance against all major failure modes, which are interconnected. Novel compositionally complex EBC materials, in addition to layered EBC architectures, show promise for the optimization of material properties for long-lifetime EBCs in combustion environments.

36 MATERIALS SCIENCE↗
DOE OSTI2025

The joys and jitters of high‐temperature calorimetry

Abstract High‐temperature calorimetry (HTC) originated in the 20th century as a niche method to enable measurements not easily accomplished with acid solution calorimetry, combustion calorimetry, vapor pressure, or EMF methods. Over time, HTC has evolved into a versatile approach to accurately quantify formation, phase transition, surface and interfacial enthalpies of a wide range of materials including minerals and refractory inorganic compounds. This evolution has been the result of numerous adjustments to experimental setups and procedures, followed by rigorous testing. The commercial availability and the scientific success of this technique have led to an increase in the number of laboratories applying HTC. However, the knowledge acquired by researchers over the past 70 years is scattered throughout the literature or only available as laboratory internal documentation and personal experience. This publication is a collaborative effort among several leading HTC laboratories to summarize and unify current state‐of‐the‐art HTC techniques and procedures. The text starts by summarizing various HT techniques that are commonly used for readers with an interest in HTC in general. It is then directed toward HTC users and includes a brief section on data evaluation procedures as well as a comprehensive compilation of reference data utilizing molten sodium molybdate and lead borate solvents. Finally, for experienced HTC users, an in‐depth discussion of some common difficulties and a discussion of uncertainties are presented.

Scharrer, Manuel [Navrotsky Eyring Center for Mate↗
DOE OSTI2022

Greenhouse gas emissions from the global transportation of crude oil: Current status and mitigation potential

Global crude-oil transportation contributes a significant portion of greenhouse gas (GHG) emissions in the marine transportation sector. In this work, we first compile a detailed country-level global crude-oil transportation network in 2018 and estimate that the direct and well-to-hull GHG emissions related to crude transportation were 97 and 109 million metric tons, respectively. Combining with the country-specific crude recovery GHG intensities, the consumption-based well-to-country-gate crude-oil GHG intensities are derived for individual countries, ranging from 2.99 to 27.32 g CO 2 eq/MJ, with a global crude-volume-weighted average of 8.67 g CO 2 eq/MJ. We then project the global crude transportation emissions at the regional level in 2050 under a static (no change) scenario (based on current ship energy efficiency) and a sustainable-development (SD) scenario (based on the International Energy Agency's projections of ship energy efficiency and penetration of alternative marine fuels). Results show that the global well-to-hull GHG emissions related to crude transportation would be 82 and 59 million metric tons in 2050 in the static and SD scenarios, respectively. To further evaluate the impact of potential fuel-switching on decarbonizing the crude oil transportation sector, we estimate the GHG emissions for 20 fuel/production options in 2050. We find that, in comparison to the static scenario, ~50% reduction in global well-to-hull GHG emissions from crude transportation could be achieved under the SD scenario if green ammonia further replaces conventional ammonia. The methodology developed here can be applied to other commodities to estimate the emissions associated with their global marine transportation and to evaluate the potential emission mitigation options.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

Protein ubiquitination in plant peroxisomes

Protein ubiquitination regulates diverse cellular processes in eukaryotic organisms, from growth and development to stress response. Proteins subjected to ubiquitination can be found in virtually all subcellular locations and organelles, including peroxisomes, single-membrane and highly dynamic organelles ubiquitous in eukaryotes. Peroxisomes contain metabolic functions essential to plants and animals such as lipid catabolism, detoxification of reactive oxygen species (ROS), biosynthesis of vital hormones and cofactors, and photorespiration. Plant peroxisomes possess a complex proteome with functions varying among different tissue types and developmental stages, and during plant response to distinct environmental cues. However, how these diverse functions are regulated at the post-translational level is poorly understood, especially in plants. Here, in this review, we summarized current knowledge of the involvement of protein ubiquitination in peroxisome protein import, remodeling, pexophagy, and metabolism, focusing on plants, and referencing discoveries from other eukaryotic systems when relevant. Based on previous ubiquitinomics studies, we compiled a list of 56 ubiquitinated Arabidopsis peroxisomal proteins whose functions are associated with all the major plant peroxisomal metabolic pathways. This discovery suggests a broad impact of protein ubiquitination on plant peroxisome functions, therefore substantiating the need to investigate this significant regulatory mechanism in peroxisomes at more depths.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

Essential oils used in dermocosmetics: Review about its biological activities

Abstract Introduction Currently, the demand for the use of constituents of natural origin in cosmetic formulations in detriment of synthetic compounds is noticeable. Several studies assess the potential of essential oils when incorporated into various cosmetic formulations and study their biological activities. This work intends to prepare a literature review on essential oils tested in dermocosmetic formulations and whose biological activities were evaluated through in vitro and/or in vivo tests. The main objectives for this study were as follows: to identify the essential oils that have been used in cosmetic formulations; and compile information on the main biological activities tested in cosmetic formulations. Methods A search was carried out until 2021 in the scientific databases PubMed and Web of Science, using different search terms, and several scientific articles from in vitro and in vivo studies in animals and clinical trials were selected and analyzed of involving development dermocosmetic formulations containing essential oils and the analysis of their biological activities. Results These studies demonstrate that the antimicrobial activity (antibacterial and antifungal) is the one most studied, mainly through in vitro tests. In vivo studies were also carried out either in animals or in clinical studies showing different effects, such as repellent action, inhibition of hair growth, and action against migraine. Regarding formulations, it was evident that creams are the most used. Conclusions There is enormous potential for the use of essential oils in future formulations in the cosmetic and pharmaceutical industry, in particular as preservatives, exploring their other biological activities.

Cunha, Cassandra↗
DOE OSTI2025

The Vertebrate Breed Ontology: Toward Effective Breed Data Standardization

Abstract Background Limited universally-adopted data standards in veterinary medicine hinder data interoperability and therefore integration and comparison; this ultimately impedes the application of existing information-based tools to support advancement in diagnostics, treatments, and precision medicine. Hypothesis/Objectives A single, coherent, logic-based standard for documenting breed names in health, production, and research-related records will improve data use capabilities in veterinary and comparative medicine. Animals No live animals were used. Methods The Vertebrate Breed Ontology (VBO) was created from breed names and related information compiled from the Food and Agriculture Organization of the United Nations, breed registries, communities, and experts, using manual and computational approaches. Each breed is represented by a VBO term that includes breed information and provenance as metadata. VBO terms are classified using description logic to allow computational applications and Artificial Intelligence–readiness. Results VBO is an open, community-driven ontology representing over 19 500 livestock and companion animal breed concepts covering 49 species. Breeds are classified based on community and expert conventions (e.g., cattle breed) and supported by relations to the breed's genus and species indicated by National Center for Biotechnology Information (NCBI) Taxonomy terms. Relationships between VBO terms (e.g., relating breeds to their foundation stock) provide additional context to support advanced data analytics. VBO term metadata includes synonyms, breed identifiers/codes, and attributed cross-references to other databases. Conclusion and Clinical Importance The adoption of VBO as a standard for breed names in databases and veterinary electronic health records enhances veterinary data interoperability and computability, supporting precision medicine.

Veterinary Sciences↗