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At least 1,729 records · Page 96

Tulane virus protease as a structural surrogate for inhibitor screening of human norovirus proteases

Human norovirus (HuNoV) is a significant cause of gastroenteritis worldwide, affecting people of all age groups. There are currently no vaccines or drugs available, leaving susceptible populations vulnerable to severe or protracted illness. A HuNoV cultivation system is pivotal for screening norovirus antivirals. While the human intestinal enteroid cultivation system allows robust replication of multiple HuNoV strains, it presents technical and cost barriers. Tulane virus (TV), a surrogate for HuNoV, replicates well in monkey kidney cell lines and is closely related to norovirus in cellular biology. Here, we determined the structures of TV protease (TV-Pro) alone and in complex with rupintrivir, a picornavirus inhibitor that also inhibits HuNoV proteases (HuNoV-Pro). Our data validate TV as an efficient surrogate system for rapid screening of HuNoV protease inhibitors. The TV protease structure exhibits significant backbone similarity to the GI.1 HuNoV protease in the substrate-binding domain, with the BII-CII loop in an open conformation stabilized by hydrogen bonds as present in the GI.1 protease. Structural differences in the S2 pocket and two amino acid changes in the S4 pocket result in slightly altered P2 and P4 substrate and inhibitor conformations. Despite these differences, we confirm previous findings that the TV protease can cleave the GI.1 and GII HuNoV polyprotein substrates with high and moderate efficiency, respectively. We found that rupintrivir efficiently inhibits TV protease in vitro and inhibits TV replication in cell culture with similar efficacy in combination with P-glycoprotein efflux pump inhibitors. We conclude that TV is a valuable surrogate for HuNoV protease inhibitor screening and outline strategies to improve its compatibility as such.

crystal structures↗

A mathematical model of physiological processes and its application to the study of aging

The behavior of a physiological system which, after displacement, returns by homeostatic mechanisms to its original condition can be described by a simple differential equation in which the "recovery time" is a parameter. Two such systems, which influence one another, can be linked mathematically by the use of "coupling" or "feedback" coefficients. These concepts are the basis for many mathematical models of physiological behavior, and we describe the general nature of such models. Next, we introduce the concept of a "fatal limit" for the displacement of a physiological system, and show how measures of such limits can be included in mathematical models. We show how the numerical values of such limits depend on the values of other system parameters, i.e., recovery times and coupling coefficients, and suggest ways of measuring all these parameters experimentally, for example by monitoring changes induced by X-irradiation. Next, we discuss age-related changes in these parameters, and show how the parameters of mortality statistics, such as the famous Gompertz parameters, can be derived from experimentally measurable changes. Concepts of onset-of-aging, critical or fatal limits, equilibrium value (homeostasis), recovery times and coupling constants are involved. Illustrations are given using published data from mouse and rat populations. We believe that this method of deriving survival patterns from model that is experimentally testable is unique.

Aging/physiology↗

Overview of the Altair Lunar Lander Thermal Control System Design and the Impacts of Global Access

NASA s Constellation Program (CxP) was developed to successfully return humans to the Lunar surface prior to 2020. The CxP included several different project offices including Altair, which was planned to be the next generation Lunar Lander. The Altair missions were architected to be quite different than the Lunar missions accomplished during the Apollo era. These differences resulted in a significantly dissimilar Thermal Control System (TCS) design. The current paper will summarize the Altair mission architecture and the various operational phases associated with the planned mission. In addition, the derived thermal requirements and the TCS designed to meet these unique and challenging thermal requirements will be presented. During the past year, the design team has focused on developing a vehicle architecture capable of accessing the entire Lunar surface. Due to the widely varying Lunar thermal environment, this global access requirement resulted in major changes to the thermal control system architecture. These changes, and the rationale behind the changes, will be detailed throughout the current paper.

Stephan, Ryan A.↗

Overview of the Altair Lunar Lander Thermal Control System Design and the Impacts of Global Access

NASA's Constellation Program (CxP) was developed to successfully return humans to the Lunar surface prior to 2020. The CxP included several different project offices including Altair, which was planned to be the next generation Lunar Lander. The Altair missions were architected to be quite different than the Lunar missions accomplished during the Apollo era. These differences resulted in a significantly dissimilar Thermal Control System (TCS) design. The current paper will summarize the Altair mission architecture and the various operational phases associated with the planned mission. In addition, the derived thermal requirements and the TCS designed to meet these unique and challenging thermal requirements will be presented. During the past year, the design team has focused on developing a vehicle architecture capable of accessing the entire Lunar surface. Due to the widely varying Lunar thermal environment, this global access requirement resulted in major changes to the thermal control system architecture. These changes, and the rationale behind the changes, will be detailed throughout the current paper.

Stephan, Ryan A.↗

User Interaction with the CNPC Link

As part of NASAs UAS in the NAS project, human factor guidelines are being developed for the ground control station of unmanned aircraft systems. A critical task for the pilot of a UAS is the management and control of the terrestrial radio links used to provide control of the vehicle and relay communications with air traffic control. An analysis of the task of the UAS pilot has been conducted to identify areas where guidelines are required. This analysis has identified a set of information requirements that must be supported by the radio equipment used to provide Control and Non-payload Communication (CNPC). Key requirements include the need for an alert when the link is lost, information on the current quality and latency of the link, and information to enable the future quality of the link to be anticipated as the aircraft changes location. These identified requirements can assist in the development of minimum operational performance standards for CNPC equipment.

unmanned aerial systems↗

Human Performance Contributions to Safety in Commercial Aviation

Every day in aviation, pilots, air traffic controllers, and other front-line personnel perform countless correct judgments and actions in a variety of operational environments. These judgments and actions are often the difference between an accident and a non-event. Ironically, data on these behaviors are rarely collected or analyzed. Data-driven decisions about safety management and design of safety-critical systems are limited by the available data, which influence how decision makers characterize problems and identify solutions. Large volumes of data are collected on the failures and errors that result in infrequent incidents and accidents, but in the absence of data on behaviors that result in routine successful outcomes, safety management and system design decisions are based on a small sample of nonrepresentative safety data. This assessment aimed to find and document “safety successes” made possible by human operators. With many Aeronautics Research Mission Directorate (ARMD) Programs and Projects focusing on increased automation and autonomy and decreased human involvement, failure to fully consider the human contributions to successful system performance in civil aviation represents a significant risk — a risk that has not been recognized to date. Without understanding how humans contribute to safety, any estimate of predicted safety of autonomous capabilities is incomplete and inherently suspect. Furthermore, understanding the ways in which humans contribute to safety can promote strategic interactions among safety technologies, functions, procedures and the people using them. Without this understanding, the full benefits of an integrated, optimized human/technology or autonomous system will not be realized. Historically, safety has been consistently defined in terms of the occurrence of accidents or recognized risks (i.e., in terms of things that go wrong). These adverse outcomes are explained by identifying their causes, and safety is restored by eliminating or mitigating these causes. An alternative to this approach is to focus on what goes right and identify how to replicate that process. Focusing on the rare cases of failures attributed to “human error” provides little information about why human performance routinely prevents adverse events. Hollnagel has proposed that things go right because people continuously adjust their work to match their operating conditions. These adjustments become increasingly important as systems continue to grow in complexity. Thus, the definition of safety should reflect not only “avoiding things that go wrong” but “ensuring that things go right.” The basis for safety management requires developing an understanding of everyday activities. However, few mechanisms to monitor everyday work exist in the aviation domain, which limits opportunities to learn how designs function in reality. This concept of safety thinking and safety management is reflected in the emerging field of resilience engineering. According to Hollnagel, a system is resilient if it can sustain required operations under expected and unexpected conditions by adjusting its functioning prior to, during, or following changes, disturbances, and opportunities. To explore “positive” behaviors that contribute to resilient performance in commercial aviation, the assessment team examined a range of existing sources of data about pilot and air traffic control (ATC) tower controller performance, including subjective interviews with domain experts and objective aircraft flight data records. These data were used to identify strategies that support resilient performance, methods for exploring and refining those strategies in existing data, and proposed methods for capturing and analyzing new data.

Null, Cynthia H.↗

TPSAS-NF1676L-31995-DND

The Osa Peninsula, located in the southern region of Costa Rica’s Pacific Coast, is one of the most biologically-diverse places on Earth and is a popular ecotourism destination. However, the area faces watershed degradation and loss of biodiversity due to deforestation, pollution from agriculture, and human settlement. The NASA DEVELOP National Program worked with Osa Conservation to analyze land use and land cover change in the Osa Peninsula to better understand threats to river water quality and mangrove health. This project used Landsat 5 Thematic Mapper (TM), Landsat 8 Operational Land Imager (OLI), and Terra Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) to create a land cover time series map from 1987 to 2017. These time series data were used to compare land use over time, as well as patterns in water quality, mangrove health, erosion, and deforestation. The time series also helped to identify the impact of the creation of protected areas and the 1996 Forest Law 7575, which aimed to support reforestation and riparian health. Osa Conservation will use and distribute results to the National System of Conservation Areas (SINAC), Ministry of Environment and Energy (MINAE), and local communities to inform land management decisions, policy enforcement, education and outreach initiatives, and watershed restoration and monitoring.

Suravi Shrestha↗

State of Wildfires

Fire is an essential component of ecosystems and acts as key driver of biogeochemical cycling with impacts on vegetation structure and composition, soil conditions, and climate feedbacks. Fire behavior and effects vary based on the types of fuel, fuel dryness, and frequency of ignition. Due to changing climate and land use patterns, fire danger is increasing in many regions globally, and fires are having increasingly devastating impacts on human health, infrastructure, and ecosystem services. Recurrent fires help to determine the distribution of trees and grasses, and overall fuel load, which inform the behavior of future fires. Process-based models can be used to capture multi-scale impacts at the forest stand-level up to the landscape level, and across minutes to centuries, but must capture variation in fire behavior and intensity as a function of the fuel and climate, from high intensity forest crown fires within boreal regions to low intensity rapid grass fires of the tropics. Fire model development demonstrates our ability to capture large scale fire influenced biogeography and vegetation distribution at the earth system scale through vegetation traits and fire feedbacks. At the individual stand scale the importance of interactions and feedbacks between above and below ground process is essential to capturing the vegetation dynamics across boreal forest systems. Improving the mechanics of including plant physiology and specifically live fuel moisture content is the next step to advancing the capability of process based models to inform fire research. Advances in the testing and creation of a mechanistic live fuel moisture model demonstrate the foundation for future live fuel dynamics research that can be informed by field and remote sensing information. Improved remote sensing, technological and modeling capabilities support a more comprehensive and cohesive fire response that will be better equipped to overcome current barriers and anticipate the new reality of fires in a warming world.

wildfires↗

BioNutrients: Microbial on-demand production of short shelf-life micronutrients in space

Long duration deep space missions pose a significant challenge when considering adequate nutrition for human spaceflight. Many micronutrients supplied in pre-packaged foods for low Earth orbit flights have a short shelf life and will degrade over multi-year missions. One strategy to mitigate the risk of micronutrient malnutrition is to grow fresh foods to supplement a pre-packaged diet. The BioNutrients project aims to develop systems for growing edible microorganisms that are genetically engineered to produce short shelf life micronutrients. BioNutrients-1 (BN-1) is a five-year spaceflight project currently underway on the International Space Station (ISS) that tests long-term storage and production of two carotenoids, β-carotene and zeaxanthin, in genetically engineered yeast strains. BN-1 on-orbit and ground control activities indicate that the nutrient production system will be stable for at least two years in ambient storage conditions. BN-1 is also testing the effects of long-term ISS storage on viability and gene expression using “stasis packs” containing a series of microorganisms useful in food and biomanufacturing processes. Stasis pack analysis is distinguishing microorganisms with full viability after two years of storage from other species that lose viability rapidly. In parallel, BioNutrients-2 (BN-2) is being developed as a six-month flight experiment that will expand the range of foods produced on ISS to include yogurt, kefir, and probiotic yeast. BN-2 will improve upon hardware design by transitioning from a hard-shell polycarbonate bioreactor to a flexible fluorinated ethylene propylene (FEP) bag. This change reduces the mass and volume required to store production packs. The long-term goal of BioNutrients is to develop the capability for rapid and safe delivery of multiple micronutrients in single-use production packs. We expect synthetic biology approaches similar to BioNutrients will play an important role for astronaut health in future NASA missions to the Moon and Mars.

Synthetic Biology↗

Human-induced changes to the global ocean water masses and their time of emergence

The World Ocean is rapidly changing, with global and regional modification of temperature and salinity, resulting in widespread and irreversible impacts. While the most pronounced observed temperature and salinity changes are located in the upper ocean, changes in water masses at depth have been identified and will probably strengthen in the future. In this study, using 11 climate models, we define when anthropogenic temperature and salinity changes are expected to emerge from natural variability in the ocean interior along density surfaces. The models predict that in 2020, 20–55% of the Atlantic, Pacific and Indian basins have an emergent anthropogenic signal; reaching 40–65% in 2050 and 55–80% in 2080. The well-ventilated Southern Ocean water masses emerge very rapidly, as early as the 1980–1990s, while the Northern Hemisphere water masses emerge in the 2010–2030s. Our results highlight the importance of maintaining and augmenting an ocean observing system capable of detecting and monitoring persistent anthropogenic changes.

54 ENVIRONMENTAL SCIENCES↗

Solid Fuel Delivery System Developed for Combustion Testing on the International Space Station

NASA initiated Bioastronautics and Human Research Initiatives in 2001 and 2003, respectively, to enhance the safety and performance of humans in space. The Flow Enclosure Accommodating Novel Investigations in Combustion of Solids (FEANICS) is a multiuser facility being built at the NASA Glenn Research Center to advance these initiatives by studying fire safety and the combustion of solid fuels in the microgravity environment of the International Space Station (ISS). One of the challenges for the FEANICS team was to build a system that allowed for several consecutive combustion tests to be performed with minimal astronaut crew interaction. FEANICS developed a fuel carousel that contains a various number of fuel samples, depending on the fuel width, and introduces them one at a time into a flow tunnel in which the combustion testing takes place. This approach will allow the science team to run the experiments from the ground, while only requiring the crew to change out carousels after several tests have been completed.

Frate, David T.↗

Hairlike Percutaneous Photochemical Sensors

Instrumentation systems based on hairlike fiber-optic photochemical sensors have been proposed as minimally invasive means of detecting biochemicals associated with cancer and other diseases. The fiber-optic sensors could be mass-produced as inexpensive, disposable components. The sensory tip of a fiber-optic sensor would be injected through the patient's skin into subcutaneous tissue. A biosensing material on the sensory tip would bind or otherwise react with the biochemical(s) of interest [the analyte(s)] to produce a change in optical properties that would be measured by use of an external photonic analyzer. After use, a fiber-optic sensor could be simply removed by plucking it out with tweezers. A fiber-optic sensor according to the proposal would be of the approximate size and shape of a human hair, and its sensory tip would resemble a follicle. Once inserted into a patient's subcutaneous tissue, the sensor would even more closely resemble a hair growing from a follicle (see Figure 1). The biosensing material on the sensory tip could consist of a chemical and/or cells cultured and modified for the purpose. The biosensing material would be contained within a membrane that would cover the tip. If the membrane were not permeable by an analyte, then it would be necessary to create pores in the membrane that would be large enough to allow analyte molecules to diffuse to the biosensing material, but not so large as to allow cells (if present as part of the biosensing material) to diffuse out. The end of the fiber-optic sensor opposite the sensory tip would be inserted in a fiberoptic socket in the photonic analyzer.

George, Thomas↗

Risk of Adverse Health and Performance Effects of Celestial Dust Exposure

Crew members can be directly exposed to celestial dust in several ways. After crew members perform extravehicular activities (EVAs), they may introduce into the habitat dust that will have collected on spacesuits and boots. Cleaning of the suits between EVAs and changing of the Environmental Control Life Support System filters are other operations that could result in direct exposure to celestial dusts. In addition, if the spacesuits used in exploration missions abrade the skin, as current EVA suits have, then contact with these wounds would provide a source of exposure. Further, if celestial dusts gain access to a suit's interior, as was the case during the Apollo missions, the dust could serve as an additional source of abrasions or enhance suit-induced injuries. When a crew leaves the surface of a celestial body and returns to microgravity, the dust that is introduced into the return vehicle will "float," thus increasing the opportunity for ocular and respiratory injury. Because the features of the respirable fraction of lunar dusts indicate they could be toxic to humans, NASA conducted several studies utilizing lunar dust simulants and authentic lunar dust to determine the unique properties of lunar dust that affect physiology, assess the dermal and ocular irritancy of the dust, and establish a permissible exposure limit for episodic exposure to airborne lunar dust during missions that would involve no more than 6 months stay on the lunar surface. Studies, with authentic lunar soils from both highland (Apollo 16) and mare (Apollo17) regions demonstrated that the lunar soil is highly abrasive to a high fidelity model of human skin. Studies of lunar dust returned during the Apollo 14 mission from an area of the moon in which the soils were comprised of mineral constituents from both major geological regions (highlands and mares regions) demonstrated only minimal ocular irritancy, and pulmonary toxicity that was less than the highly toxic terrestrial crystalline silica (Permissible Exposure Limit [PEL] 0.05 mg/m3) but more toxic than the nuisance dust titanium dioxide (TiO2 [PEL 5.0 mg/m3]). A PEL for episodic exposure to airborne lunar dust during a six-month stay on the lunar surface was established, in consultation with an independent, extramural panel of expert pulmonary toxicologists, at 0.3 mg/m3. The PEL provided for lunar dust is limited to the conditions and exposure specified therefore additional research remains to be accomplished with lunar dust to further address the issues of activation, address other areas of more unique lunar geology (Glotch et al., 2010; Greenhagen et al., 2010), examine potential toxicological effects of inhaled or ingested dust upon other organ systems, such cardiovascular, nervous systems, and examine effects of acute exposure to massive doses of dust such as may occur during off-nominal situations. Work to support the establishment of PELs for Martian dust and dusts of asteroids remains to be accomplished. The literature that describes health effects of exposure to toxic terrestrial dusts provides substantial basis for concern that prolonged exposure to respirable celestial dust could be detrimental to human health. Celestial bodies where a substantial portion of the dust is in the respirable range or where the dusts have large reactive surface areas or contain transition metals or volatile organics, represent greater risks of adverse effects from exposure to the dust. It is possible that in addition to adverse effects to the respiratory system, inhalation and ingestion of celestial dusts could pose risks to other systems

Scully, Robert R.↗

Population Accommodation for NASA Spacesuit and Hardware

The goal of this work is to review the population accommodation principles and methodologies NASA Johnson Space Center has developed for the spacesuit, vehicle hardware, and habitats. NASA has defined the target population characteristics in the Human-System Integration Requirements based on the US Army Anthropometric Survey (ANSUR) database. However, the data was screened to select the cases of 30-50 year old subjects, given the historical characteristics of the crew. Further, accommodation ranges were defined for critical body measurements, as NASA aims to accommodate 1st percentile female to 99th percentile male of the crew-like population. The historical truncation thresholds of 5-95th percentiles were not used. This ensured that the accommodation range was not limited and accounted for the current astronaut population. A simulation study also showed that less than 68% of the population may have remained after multiple measurement truncations due to the anthropometry covariance patterns if the narrower range was retained. The ranges were also adjusted for long-term trends of body shape changes as predicted by the US National Health and Nutrition Examination Survey. Overall, the requirements were deemed critical to ensure the fit and accommodation of the new suit and space hardware. The requirements have specifically defined boundary cases for verifications and validations, of which the details have proven useful as standards across the different space programs. The specific use and benefits will be further discussed through case studies at the presentation.

Han Kim↗

Life sciences space missions. Overview

It has been known for many years that weightlessness induces changes in numerous physiological systems: the cardiovascular system declines in both aerobic capacity and orthostatic tolerance; there is a reduction in fluid and electrolyte balance, hematocrit, and certain immune parameters; bone and muscle mass and strength are reduced; various neurological responses include space motion sickness and posture and gate alterations. These responses are caused by the hypokinesia of weightlessness, the cephalic fluid shift, the unloading of the vestibular system, stress, and the altered temporal environment.

NASA Center HQS↗

Long-term effects of low-dose proton radiation on immunity in mice: shielded vs. unshielded

BACKGROUND: Outside the protection of the terrestrial environment, astronauts on any long-term missions will unavoidably be exposed to fields of charged particle radiation dominated by protons. These fields and their biological risks are modified in complex ways by the presence of protective shielding. METHODS: To examine the long-term effects of space-like proton exposures on immune status, we treated female C57BL/6 mice with 3 or 4 Gy of 250 MeV monoenergetic protons or the complex space-like radiation field produced after 250 MeV protons are transported through 15 g x cm(-2) aluminum shielding. The animals were euthanized 122 d post-irradiation and lymphocyte phenotypes, hematological parameters, and lymphocyte blastogenesis were characterized. RESULTS: There were significant dose-dependent decreases in macrophage, CD3+/CD8+ T, NK, platelet, and red blood cell populations, as well as low hematocrit and hemoglobin levels. In contrast, dose-dependent increases in spontaneous, but not mitogen-induced, blastogenesis were noted. The differences in dose composition between pristine and shielded proton fields did not lead to significant effects in most measures, but did result in significant changes in monocyte and macrophage populations and spontaneous blastogenesis in the spleen. CONCLUSIONS: The data indicate that whole body exposure to proton radiation at doses of the order of large solar particle events or clinical treatment fractions may have long-term effects on immune system status.

NASA Discipline Radiation Health↗

Urban-Scale Processes in High-Spatial-Resolution Earth System Models

Cities and their associated urban areas have a much larger impact on the environment than their spatial footprint on the Earth's surface. This is undoubtedly true at local and regional scales, but also at global scales. At this time, more than half of the world's population lives in urban areas (80% in the United States), and the global proportion is projected to climb to 70% by 2050. Therefore, numerical models to study physics, chemistry, and biology affecting the Earth system at regional and global scales must represent the effects of urban areas on climate and the effects of a changing climate on urban areas. At the same time, it is essential to develop state of the art, simple and accurate urban models to better understand the relevant processes and also to address issues related to urban security against the spectra of chemical, biological and radiological (CBR) hazards. Towards bringing urban scientific communities together, a two-and-a-half-day international workshop was held at the Argonne National Laboratory (ANL) in the Chicago area on May 22-24, 2019. This workshop brought together more than 60 national and international experts to develop a roadmap for a better understanding of the issues associated with urban areas and at enhancing the capabilities of regional and global Earth System models (ESMs) in representing the atmospheric dynamics and chemistry, unique aspects of the biosphere and land use, and human dimensions of the urban environment.

54 ENVIRONMENTAL SCIENCES↗

Science-integrated Artificial-intelligence for Flooding and precipitation Extremes (SAFE)

A grand challenge in hydrologic science is to understand why signals of climate change and variability, which are often visible in precipitation extremes at aggregate scales, are not consistently observed in the case of extreme flooding. However, a solution to this challenge may prove elusive unless the water cycle is viewed in an integrative manner. Thus, for riverine flooding, while Hortonian (infiltration excess) runoff may have stronger correlation with precipitation extremes and hence perhaps to warming trends or climate oscillators, Dunne (saturation excess) runoff may have a more complex relationships with time series of precipitation and with evaporation and transpiration, but rain-on-snow and snowmelt events may depend on land-surface and atmospheric temperatures. Atmospheric rivers and tropical cyclones lead to precipitation or flooding and are impacted by climate. Flooding assessments need to consider long-term baselines, evolving risk factors, coupled natural-human systems, and novel adaptation such as nature-inspired design.

54 ENVIRONMENTAL SCIENCES↗