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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 1,729 records · Page 96
All sourcesNASA NTRSDOE OSTI
DOE OSTI2025

Design of diverse, functional mitochondrial targeting sequences across eukaryotic organisms using variational autoencoder

Mitochondria play a key role in energy production and metabolism, making them a promising target for metabolic engineering and disease treatment. However, despite the known influence of passenger proteins on localization efficiency, only a few protein-localization tags have been characterized for mitochondrial targeting. To address this limitation, we leverage a Variational Autoencoder to design novel mitochondrial targeting sequences. In silico analysis reveals that a high fraction of the generated peptides (90.14%) are functional and possess features important for mitochondrial targeting. We characterize artificial peptides in four eukaryotic organisms and, as a proof-of-concept, demonstrate their utility in increasing 3-hydroxypropionic acid titers through pathway compartmentalization and improving 5-aminolevulinate synthase delivery by 1.62-fold and 4.76-fold, respectively. Moreover, we employ latent space interpolation to shed light on the evolutionary origins of dual-targeting sequences. Overall, our work demonstrates the potential of generative artificial intelligence for both fundamental research and practical applications in mitochondrial biology.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

Deep learning for visualization and novelty detection in large X-ray diffraction datasets

Abstract We apply variational autoencoders (VAE) to X-ray diffraction (XRD) data analysis on both simulated and experimental thin-film data. We show that crystal structure representations learned by a VAE reveal latent information, such as the structural similarity of textured diffraction patterns. While other artificial intelligence (AI) agents are effective at classifying XRD data into known phases, a similarly conditioned VAE is uniquely effective at knowing what it doesn’t know: it can rapidly identify data outside the distribution it was trained on, such as novel phases and mixtures. These capabilities demonstrate that a VAE is a valuable AI agent for aiding materials discovery and understanding XRD measurements both ‘on-the-fly’ and during post hoc analysis.

36 MATERIALS SCIENCE↗
DOE OSTI2017

What happens to full-f gyrokinetic transport and turbulence in a toroidal wedge simulation?

Here, in order to save the computing time or to fit the simulation size into a limited computing hardware in a gyrokinetic turbulence simulation of a tokamak plasma, a toroidal wedge simulation may be utilized in which only a partial toroidal section is modeled with a periodic boundary condition in the toroidal direction. The most severe restriction in the wedge simulation is expected to be in the longest wavelength turbulence, i.e., ion temperature gradient (ITG) driven turbulence. The global full-f gyrokinetic code XGC1 is used to compare the transport and turbulence properties from a toroidal wedge simulation against the full torus simulation in an ITG unstable plasma in a model toroidal geometry. It is found that (1) the convergence study in the wedge number needs to be conducted all the way down to the full torus in order to avoid a false convergence, (2) a reasonably accurate simulation can be performed if the correct wedge number N can be identified, (3) the validity of a wedge simulation may be checked by performing a wave-number spectral analysis of the turbulence amplitude |δΦ| and assuring that the variation of δΦ between the discrete kθ values is less than 25% compared to the peak |δΦ|, and (4) a frequency spectrum may not be used for the validity check of a wedge simulation.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2020

A comprehensive conductivity model for drift and micro-tearing modes

The parallel electrical conductivity is a crucial parameter in the study of the linear stability of drift-modes like the micro-tearing mode (MTM). The conductivity enters by closing the electromagnetic tearing layer equations. Recent progress in the understanding of the pedestal suggests that the MTM could play an important role in its structure and evolution. For this reason, we revisit and improve previous model conductivities. This parameter is generally derived from the linearized drift kinetic equation. In the past literature, it has been computed using either simplified collision operators or neglecting the spatial dependence away from the rational surface. Here, a fully consistent expression for the conductivity that would accurately model the pedestal has not been available. By applying a novel variational procedure and with the full Fokker Plank collision operator, including electron–electron collisions, we compute a closed expression for the parallel electrical conductivity in the form of a rational function.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2022

Effect of void positioning on the detonation sensitivity of a heterogeneous energetic material

We show although it is well-established that voids profoundly influence the initiation and reaction behaviors of heterogeneous energetic materials such as polymer-bonded explosives (PBX) and propellants, there has been little study of how void location in different constituents in the microstructures of such materials affect the macroscale behavior. Here, we use three-dimensional (3D) mesoscale simulations to study how void placement within the reactive grains versus the polymer binder influences the shock-to-detonation transition (SDT) in a polymer-bonded explosive. The material studied here has a microstructure comprised of 75% PETN (pentaerythritol tetranitrate) grains and 25% HTPB (hydroxyl-terminated polybutadiene) polymer binder by volume. Porosities up to 10% in the form of spherical voids distributed in both the grains and polymer are considered. An Arrhenius reactive burn relation is used to model the chemical kinetics of the PETN grains under shock loading, thereby resolving the heterogeneous detonation behavior of the PBX. The influence of void location on the shock initiation sensitivity of the material is quantitatively ranked by comparing the predicted run distance to detonation (RDD) for each sample. The analysis includes inherent quantification of uncertainties arising from the stochastic variations in the microstructure morphologies and void distributions by using statistically equivalent microstructure sample sets (SEMSS), leading to probabilistic formulations for the RDD as a function of shock pressure. The calculations reveal that the location of voids in the composite microstructure significantly affects the RDD. Specifically, voids exclusively within the grains cause the PBX to be more sensitive (having shorter RDD) than voids in the polymer binder. Unique probabilistic relationships are derived to map the probability of observing RDD for each void location material case, allowing for prediction of initiation behavior anywhere in the shock pressure – RDD space. These findings agree with trends reported in the literature.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2018

Advances and challenges in computational fluid dynamics of atmospheric pressure plasmas

Atmospheric pressure plasmas (APPs) are at the core of diverse technological applications in materials processing, chemical synthesis, resource recovery, water treatment, and medicine, among others. APPs span a wide range of power density, from low-power non-thermal to high-power thermal discharges, and typically involve interactions with a stream of working gas, processing material, or gas environment. The article provides an overview of Computational Fluid Dynamics (CFD) approaches, from mathematical models to software strategies, for the analysis of APP flows. Its focus is flows with large variations in ionization degree and significant fluid dynamic-thermal-electromagnetic coupling, as particularly found in mid- to high-power discharges. The advances achieved and challenges faced by CFD of APP flows have been driven by established and emerging applications, and can be broadly characterized in terms of model fidelity and numerical accuracy. Fidelity refers to the degree of underlying phenomena captured by the model, whereas accuracy to the precision of the numerical solution of the model. Two distinct numerical accuracy challenges are addressed: the capture of instability and pattern formation phenomena, and of plasma-gas interaction and turbulence; as well as two representative fidelity challenges: radiative transport under nonequilibrium conditions, and nonequilibrium electron and particle kinetics. The purpose of this article is to offer guidance to researchers, from modelers and code developers to open-source and commercial software users, working on CFD analyses of APP flows within technological contexts.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2024

Efficient mapping between void shapes and stress fields using Deep Convolutional Neural Networks with sparse data

Establishing fast and accurate structure-to-property relationships is an important component in the design and discovery of advanced materials. Physics-based simulation models like the finite element method (FEM) are often used to predict deformation, stress, and strain fields as a function of material microstructure in material and structural systems. Such models may be computationally expensive and time intensive if the underlying physics of the system is complex. This limits their application to solve inverse design problems and identify structures that maximize performance. In such scenarios, surrogate models are employed to make the forward mapping computationally efficient to evaluate. However, the high dimensionality of the input microstructure and the output field of interest often renders such surrogate models inefficient, especially when dealing with sparse data. Deep convolutional neural network (CNN) based surrogate models have shown great promise in handling such high-dimensional problems. In this paper, a single ellipsoidal void structure under a uniaxial tensile load represented by a linear elastic, high-dimensional and expensive-to-query, FEM model. We consider two deep CNN architectures, a modified convolutional autoencoder framework with a fully connected bottleneck and a UNet CNN, and compare their accuracy in predicting the von Mises stress field for any given input void shape in the FEM model. Additionally, a sensitivity analysis study is performed using the two approaches, where the variation in the prediction accuracy on unseen test data is studied through numerical experiments by varying the number of training samples from 20 to 100.

surrogate modeling; convolutional neural networks;↗
DOE OSTI2017

LUNUS, Version 0.1a

LUNUS software for generating 3D maps of diffuse scattering from macromolecular X-ray crystallography diffraction images. A set of tools needed for advanced refinement of crystal structures and crystallographic charge density models. Includes tools for processing X--ray diffraction images, charge density maps, and structure factors for analysis of diffuse X-ray scattering and charge density variations in crystallography. Specific methods include: elementary algebraic operations on images and 3D lattices; fourier transform of images and 3D lattices; image processing to measure diffuse intensity; crystallographic refinement; and 3D integration of diffuse intensity.

Wall, Michael↗
DOE OSTI2024

Data for "Design of Diverse, Functional Mitochondrial Targeting Sequences Across Eukaryotic Organisms Using Variational Autoencoder"

Mitochondria play a key role in energy production and metabolism, making them a promising target for metabolic engineering and disease treatment. However, despite the known influence of passenger proteins on localization efficiency, only a few protein-localization tags have been characterized for mitochondrial targeting. To address this limitation, we leverage a Variational Autoencoder to design novel mitochondrial targeting sequences. In silico analysis reveals that a high fraction of the generated peptides (90.14%) are functional and possess features important for mitochondrial targeting. We characterize artificial peptides in four eukaryotic organisms and, as a proof-of-concept, demonstrate their utility in increasing 3-hydroxypropionic acid titers through pathway compartmentalization and improving 5-aminolevulinate synthase delivery by 1.62-fold and 4.76-fold, respectively. Moreover, we employ latent space interpolation to shed light on the evolutionary origins of dual-targeting sequences. Overall, our work demonstrates the potential of generative artificial intelligence for both fundamental research and practical applications in mitochondrial biology.

AI/ML↗
DOE OSTI2016

Operational Characteristics of an Accelerator Driven Fissile Solution System

Operational characteristics represent the set of responses that a nuclear system exhibits during normal operation. Operators rely on this behavior to assess the status of the system and to predict the consequences of off-normal events. These characteristics largely refer to the relationship between power and system operating conditions. The static and dynamic behavior of a chain-reacting system, operating at sufficient power, is primarily governed by reactivity effects. The science of reactor physics has identified and evaluated a number of such effects, including Doppler broadening and shifts in the thermal neutron spectrum. Often these reactivity effects are quantified in the form of feedback coefficients that serve as coupling coefficients relating the neutron population and the physical mechanisms that drive reactivity effects, such as fissile material temperature and density changes. The operational characteristics of such nuclear systems usually manifest themselves when perturbations between system power (neutron population) and system operating conditions arise. Successful operation of such systems requires the establishment of steady equilibrium conditions. However, prior to obtaining the desired equilibrium (steady-state) conditions, an approach from zero-power (startup) must occur. This operational regime may possess certain limiting system conditions that must be maintained to achieve effective startup. Once steady-state is achieved, a key characteristic of this operational regime is the level of stability that the system possesses. Finally, a third operational regime, shutdown, may also possess limiting conditions of operation that must be maintained. This report documents the operational characteristics of a “generic” Accelerator Driven Fissile Solution (ADFS) system during the various operational regimes of startup, steady-state operation, and shutdown. Typical time-dependent behavior for each operational regime will be illustrated, and key system parameters, such as response times, will be quantified. A generalized linear systems analysis of steady-state operations will be performed to evaluate the level of stability of ADFS systems. This information should provide a basic understanding of typical ADFS system operational behavior, and facilitate the development of monitoring procedures and operator aids.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗
DOE OSTI2019

Fuel Swelling and Creep Analysis for a MURR LEU U-10Mo Monolithic Plate

In this work, finite element analysis (FEA) is used to model and simulate the thermo-mechanical behavior of a selected LEU MURR fuel plate under typical irradiation conditions of the proposed LEU MURR core. The proposed LEU fuel element for MURR conversion has 23 curved fuel plates. The fuel element design and analysis are described in Reference [7]. The safety analysis for calculating the margin to flow instability that had elements with a mixture of burnups, which is typical for MURR operations. In addition to the application of engineering hot channel factors to account for variations in the fuel element manufacturing that could affect the coolant channel gaps, the analysis assumed a constriction of the coolant channel gaps due to an increase in the fuel plate thicknesses during the element lifetime. Estimates of the local plate thickness increase at end-of-life (EOL) due to fuel swelling and creep were developed from experimental data presented in References [8] and [9]. The maximum local plate thickness increase from that analysis was calculated for fuel plate 23 in an EOL element. Furthermore, the minimum margin to flow instability for the reference LEU cores was calculated to occur in coolant channel 23 of an EOL element, which is the coolant channel between plates 22 and 23. Therefore,the work performed here evaluated plate 23 only, as this was found to be the most limiting plate.

Mohamed, Walid↗
DOE OSTI2016

V&V of Residual Stress for GTS

Residual stresses induced during forging and welding can cause detrimental failure in reservoirs due to enhanced possibility of crack propagation. Therefore, reservoirs must be designed with yield strengths in a tight range. This report summarizes an effort to verify and validate a computational tool that was developed to aid in prediction of the evolution of residual stresses throughout the manufacturing process. The application requirements are identified and summarized in the context of the Predictive Capability Maturity Model (PCMM). The phenomena of interest that the model attempts to capture are discussed and prioritized using the Phenomena Identification and Ranking Table (PIRT) to identify any gaps in our approach. The fidelity of the modeling approach is outlined and details on the implementation and boundary conditions are provided. The code verification requirements are discussed and solution verification is performed, including a mesh convergence study on the series of modeling steps (forging, machining and welding). Validation activities are summarized, including validation of the displacements, residual stresses, recrystallization, yield strength and thermal history. A sensitivity analysis and uncertainty quantification are also performed to understand how variations in the manufacturing process affect the residual stresses.

42 ENGINEERING↗
DOE OSTI2019

Shortening the Design and Certification Cycle for Additively Manufactured Materials by Improved Mesoscale Simulations and Validation Experiments: Fiscal Year 2019 Status Report.

This report outlines the fiscal year (FY) 2019 status of an ongoing multi-year effort to develop a general, microstructurally-aware, continuum-level model for representing the dynamic response of material with complex microstructures. This work has focused on accurately representing the response of both conventionally wrought processed and additively manufactured (AM) 304L stainless steel (SS) as a test case. Additive manufacturing, or 3D printing, is an emerging technology capable of enabling shortened design and certification cycles for stockpile components through rapid prototyping. However, there is not an understanding of how the complex and unique microstructures of AM materials affect their mechanical response at high strain rates. To achieve our project goal, an upscaling technique was developed to bridge the gap between the microstructural and continuum scales to represent AM microstructures on a Finite Element (FE) mesh. This process involves the simulations of the additive process using the Sandia developed kinetic Monte Carlo (KMC) code SPPARKS. These SPPARKS microstructures are characterized using clustering algorithms from machine learning and used to populate the quadrature points of a FE mesh. Additionally, a spall kinetic model (SKM) was developed to more accurately represent the dynamic failure of AM materials. Validation experiments were performed using both pulsed power machines and projectile launchers. These experiments have provided equation of state (EOS) and flow strength measurements of both wrought and AM 304L SS to above Mbar pressures. In some experiments, multi-point interferometry was used to quantify the variation is observed material response of the AM 304L SS. Analysis of these experiments is ongoing, but preliminary comparisons of our upscaling technique and SKM to experimental data were performed as a validation exercise. Moving forward, this project will advance and further validate our computational framework, using advanced theory and additional high-fidelity experiments.

36 MATERIALS SCIENCE↗
DOE OSTI2021

Online Monitoring System for Concrete Structures Affected by Alkali-Silica Reaction

This report presents a comprehensive study of developing ultrasonic wave and acoustic emission (AE) techniques for long-term monitoring of alkali-silica reaction (ASR) development in concrete. Small, medium, and full-scale concrete specimens were cast, conditioned, and monitored for various periods, from at least one year to 2.4 years. The reactive concrete specimens contain coarse or fine reactive aggregates to study the effects of different types of reactive aggregates. Confinements were also designed to simulate the 2-dimensional confinement effects of reinforcement in the shield building of nuclear power plants. The concrete specimens were stored in a environmental chamber with high humidity and high temperature to accelerate the ASR development. The ultrasonic monitoring data shows high sensitivity to ASR development and could detect cracking initiation well before visible surface cracks occurred. However, the linear ultrasonic analysis based on wave velocity is strongly affected by temperature variation. Therefore, a nonlinear ultrasonic method was proposed to measure thermally induced nonlinear acoustic responses of concrete (thermal modulation of ultrasonic wave). The measured nonlinear acoustic parameter shows a high correlation with ASR expansion across specimens with different reactive aggregates and confinement conditions. The same conclusion was obtained from nonlinear resonance tests on small concrete prisms. Compared to the linear acoustic methods, the nonlinear tests show high sensitivities to ASR damage from internal microcracking initiation at the early stage to visible cracks at the late stage of ASR. The attributes of the thermal modulation of nonlinear ultrasonic method include high sensitivity, immunity to temperature effects, and strong correlation with ASR expansion, which demonstrate great potentials of the nonlinear ultrasonic method for diagnosis of ASR damage and prediction of concrete deterioration process. Acoustic emission is a passive sensing technique for damage assessment, and access to only one surface is needed even for thick and heavily reinforced elements such as the walls utilized for nuclear shield building. Additionally, relatively few sensors are required to monitor the progression of the damage process. Results indicate that the AE data can be related to the damage rating index, which is a petrography-based means of assessing damage due to ASR in reinforced concrete. Furthermore, AE is capable of detecting ASR damage long before surface cracking is visually noticeable. Boundary conditions play in important role in the progression of ASR damage and differences in boundary conditions are reflected in the AE data. Entropy based data assessment methods provide a means to assess the damage state, and convolutional neural network based data assessment provided a means to assess the damage state in real-time. Results indicate that artificial neural network models may be used as a means to predict volumetric expansion based on AE data.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗
DOE OSTI2020

An Optimal Power Control Strategy for Grid-Following Inverters in a Synchronous Frame

This work proposes a power control strategy based on the linear quadratic regulator with optimal reference tracking (LQR-ORT) for a three-phase inverter-based generator (IBG) using an LCL filter. The use of an LQR-ORT controller increases robustness margins and reduces the quadratic value of the power error and control inputs during transient response. A model in a synchronous reference frame that integrates power sharing and voltage–current (V–I) dynamics is also proposed. This model allows for analyzing closed-loop eigenvalue location and robustness margins. The proposed controller was compared against a classical droop approach using proportional-resonant controllers for the inner loops. Mathematical analysis and hardware-in-the-loop (HIL) experiments under variations in the LCL filter components demonstrate fulfillment of robustness and performance bounds of the LQR-ORT controller. Experimental results demonstrate accuracy of the proposed model and the effectiveness of the LQR-ORT controller in improving transient response, robustness, and power decoupling.

24 POWER TRANSMISSION AND DISTRIBUTION↗
DOE OSTI2024

Analysis of Near-Field Magnetic Responses on ZrTe 5 through Cryogenic Magneto-THz Nano-Imaging

One manifestation of light-Weyl fermion interaction is the emergence of chiral magnetic effects under magnetic fields. Probing real space magnetic responses at terahertz (THz) scales is challenging but highly desired, as the local responses are less affected by the topologically trivial inhomogeneity that is ubiquitous in spatially averaged measurements. Here, we implement a cryogenic THz microscopy instrument under a magnetic field environment—a task only recently achieved. We explore the technical approach of this system and characterize the magnetic field’s influence on our AFM operation by statistical noise analysis. We find evidence for local near-field spatial variations in the topological semimetal ZrTe 5 up to a 5-Tesla magnetic field and obtain near-field THz spectra to discuss their implications for future studies on the chiral magnetic effect.

36 MATERIALS SCIENCE↗
DOE OSTI2026

Exploring Building Retrofit Strategies Using AutoBEM Under Future Weather Scenarios

This study evaluates the long-term effectiveness of energy conservation measures (ECMs) on building energy consumption using AutoBEM, a scalable modeling framework driven by the high-resolution Model America dataset. We simulated 18,951 buildings in Flagstaff, Arizona under four climate scenarios using Future Typical Meteorological Year (fTMY) weather files for six time periods spanning from 1980 to 2099. Six ECMs were analyzed across electricity and gas usage, including HVAC fuel-switching, insulation upgrades, and infiltration control. While some measures, such as reducing space infiltration by percentage, showed minimal or even negative impact on total energy savings at the aggregate level, they proved highly effective for specific building types. Conversely, HVAC electrification offers high gas reduction but shifts demand to electricity, highlighting critical trade-offs under different climate trajectories. Building-type-specific analysis under SSP5-RCP8.5 (2080–2099) revealed significant variation in ECM performance, underscoring the need for targeted retrofit strategies. This study demonstrates the power of combining fTMY projections with large-scale simulations to inform data-driven retrofit planning.

Chowdhury, Shovan [ORNL]↗