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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 1,711 records · Page 95
All sourcesNASA NTRSDOE OSTI
DOE OSTI2020

Bioscience COVID Rapid Response Report

The COVID-19 disease outbreak and its impact on global health and economies have highlighted the national security threat posed by pathogens with pandemic potential and the need for rapid development of effective diagnostics and medical countermeasures. The Bioscience IA selected for funding rapid COVID LDRD project proposals that addressed critical R&D gaps in pandemic response that could be accomplished in 1-3 months with the requested funding. In total, the Bioscience IA funded nine rapid projects that addressed 1) rapid and accurate methods for SARS-CoV-2 RNA detection, 2) modeling tools to help prioritize populations for diagnostic testing, 3) bioinformatic tools to track SARS-CoV-2 genomic sequence changes over time, 4) molecular inhibitors of SARS-CoV-2 cellular infection, and 5) method for rapid staging of COVID19 disease to enable administration of more effective treatments. In addition, LDRD funded one larger project to be completed in FY21 that leverages Sandia capabilities to address the need for platform diagnostics and therapeutics that can be rapidly tailored against emerging pathogen targets.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

Lessons Learnt From the COVID-19 Pandemic

The COVID-19 pandemic, caused by the novel coronavirus SARS-CoV-2, has been characterized by unprecedented rates of spatio-temporal spread. Here, we summarize the main events in the pandemic's timeline and evaluate what has been learnt by the public health community. We also discuss the implications for future public health policy and, specifically, the practice of epidemic control. We critically analyze this ongoing pandemic's timeline and contrast it with the 2002–2003 SARS outbreak. We identify specific areas (e.g., pathogen identification and initial reporting) wherein the international community learnt valuable lessons from the SARS outbreak. However, we also identify the key areas where international public health policy failed leading to the exponential spread of the pandemic. We outline a clear agenda for improved pandemic control in the future.

60 APPLIED LIFE SCIENCES↗
NASA NTRS1994

Ice Lead Orientation Characteristics in the Winter Beaufort Sea

The directional orientations of leads in the winter ice pack of the Beaufort Sea are studied both spatially and temporally. Data from the European Earth Resources Satellite-1 (ERS-1) Synthetic Aperture Radar (SAR) was used. The SAR data was produced in image form at the Alaska SAR Facility (ASF) with 100 x 100 m pixel resolution. The lead ice pixels, which included all non-multiyear ice, were defined using a simple thresholding of the radar backscatter values. The orientations of the leads covering the Beaufort Sea during the period of January through March of 1992 were derived using a lead skeletonization technique. Results show a strong temporal persistence in the distribution and orientation of the leads during this period.

SAR ice lead orientation↗
NASA NTRS1998

PRF Ambiguity Detrmination for Radarsat ScanSAR System

PRF ambiguity is a potential problem for a spaceborne SAR operated at high frequencies. For a strip mode SAR, there were several approaches to solve this problem. This paper, however, addresses PRF ambiguity determination algorithms suitable for a burst mode SAR system such as the Radarsat ScanSAR. The candidate algorithms include the wavelength diversity algorithm, range look cross correlation algorithm, and multi-PRF algorithm.

Doppler centroid PRF ambiguity ScanSAR SAR burst w↗
NASA NTRS1996

Estimation of Canopy Water Content in Konza Parry Grasslands Using Synthetic Aperture Radar Measurements During FIFE

This paper presents the development of an algorithm to retrieve the canopy water contents of natural grasslands and pasture from synthetic aperture radar (SAR) measurements. The development on this algorithm involves three interrelated steps: (1) calibration of SAR data for ground topographic variations, (2) development and validation of backscatter model for cross-polarized ratio. The polarimetric radar data acquired by the Jet Propulsion Laboratory AIRSAR system during the 1989 First International Satellite land Surface Climatology Project (ISLSCP) Field Experiment (FIFE) used for this study. The SAR data have been calibrated and corrected for the topographical effects by using the digital elevation map of the study area.

canopy water contents algorithm Konza Konza Parry ↗
NASA NTRS2012

Study of Movement and Seepage Along Levees Using DINSAR and the Airborne UAVSAR Instrument

We have studied the utility of high resolution SAR (synthetic aperture radar) for levee monitoring using UAVSAR (Uninhabited Aerial Vehicle Synthetic Aperture Radar) data collected along the dikes and levees in California's Sacramento-San Joaquin Delta and along the lower Mississippi River. Our study has focused on detecting and tracking changes that are indicative of potential problem spots, namely deformation of the levees, subsidence along the levee toe, and seepage through the levees, making use of polarimetric and interferometric SAR techniques. Here was present some results of those studies, which show that high resolution, low noise SAR imaging could supplement more traditional ground-based monitoring methods by providing early indicators of seepage and deformation.

levee health↗
NASA NTRS2016

Development of RFI Mitigation Techniques with Digital Beamforming

Remote sensing radars with longer wavelengths penetrate deeper into the observed scene and are more suitable for the scientific observation of ice sheets or vegetation. Therefore, SAR systems are moving to lower frequencies like L- or P-band. However, as the frequency spectrum is a limited resource, this means that the occupied frequency band has to be shared with existing users. These users can have serious impact on the imaging quality. Radio frequency interference (RFI) that arrives at the antenna together with the SAR backscatter is causing a drop of the signal-to-noise ratio. Despite the high processing gain of the SAR signal, artifacts can appear in the image if the RFI is strong enough. This can lead to a corruption of the acquired data and make it unsuitable for scientific purposes. Hence, the investigation of methods for RFI mitigation is critical to the performance of radar missions and to ensure they meet their main task.

Digital Beamforming↗
NASA NTRS2016

Digital Beamforming Synthetic Aperture Radar Developments at NASA Goddard Space Flight Center

Advanced Digital Beamforming (DBF) Synthetic Aperture Radar (SAR) technology is an area of research and development pursued at the NASA Goddard Space Flight Center (GSFC). Advanced SAR architectures enhances radar performance and opens a new set of capabilities in radar remote sensing. DBSAR-2 and EcoSAR are two state-of-the-art radar systems recently developed and tested. These new instruments employ multiple input-multiple output (MIMO) architectures characterized by multi-mode operation, software defined waveform generation, digital beamforming, and configurable radar parameters. The instruments have been developed to support several disciplines in Earth and Planetary sciences. This paper describes the radars advanced features and report on the latest SAR processing and calibration efforts.

Wide band↗
NASA NTRS1996

RADARSAT Processing System at ASF

This paper outlines the ASF (Alaska SAR[synthetic aperture radar] Facility) Radarsat data processing requirements as driven by the science users and describes the Radarsat processing system design and implementaiton approach to meet the challenge of providing ASF with and integrated operational SAR image production facility. Design and implementation attributes that facilitate syswtem growth in handling future SAR missions such as Envisat and HIROS are also addressed.

ASF↗
NASA NTRS1995

(abstract) SIR-C/X-SAR: A Multifaceted Radar

The Spaceborne Imaging Radar-C/X-band Synthetic Aperture Radar (SAR-C/X-SAR) was a joint US/German/Italian project, with flights aboard the shuttle Endeavor in April and October 1994. SIR-C/X-SAR is the first spaceborne multifrequency, multipolarization radar. The SIR-C and the X-SAR were designed to operate in conjunction with each other, collecting data over common sites. Scientists around the world are using the data in conjunction with ground measurements to conduct experiments relating to Earth's ecology, geology, hydrology, and oceanography. In addition, the data are the most comprehensive set yet available for engineering characterization of spaceborne SAR capabilities relative to various radar phenomenology and methodology. Preliminary results show changes between missions in vegetation, ice, snow, flooding, and volcano activity.

imaging↗
NASA NTRS2024

Commercial Synthetic Aperture Radar Data for Surface Deformation and Change

The commercial synthetic aperture radar (SAR) market is experiencing year-over-year growth and is currently capable of imaging anywhere in the world within an hour at X-band. Surface Deformation and Change (SDC) is a mission study at NASA to investigate innovative architectures beyond the NASA-ISRO SAR (NISAR) mission in the next decade. In this article we present preliminary findings on the technical capabilities of the currently available commercial SAR data, and investigate their applicability to SDC goals, such as imaging quality and retrieval of surface motion.

SAR↗
DOE OSTI2022

Efficacy of a Short-Term Captive Broodstock Program Compared with Hatchery-Origin Spring Chinook Salmon Derived from the Same Population

Abstract We examined the efficacy of a one-generation (five brood years: 1997–2001) captive broodstock program for spring Chinook Salmon Oncorhynchus tshawytscha by comparing survival rates of captive broodstock progeny (CBP; F2) with that of hatchery-origin fish (HOR) from a conservation hatchery supplementation program in which both groups were derived from the Tucannon River (Washington State) population for the 2000–2006 brood years. Survival rates compared were egg to fry, fry to smolt, egg to smolt, total (ages 3–5) and adult (ages 4+) smolt-to-adult-return (SAR) survival, and total (ages 3–5) and adult (ages 4+) progeny-to-parent (P:P) ratio. Total escapement and adult P:P ratios were also examined to determine if observed demographic benefits to the population continued after the captive broodstock program ended. The CBP group had lower within-hatchery survival than the HOR group, with significant differences in survival at the egg-to-fry and egg-to-smolt stages due to poor egg viability. Mean untransformed total and adult SARs for the CBP were half those of the HOR group; however, SARs did not differ significantly. The CBP also had significantly lower total and adult P:P ratios than the HOR group and were below replacement for six of the seven brood years. While the captive broodstock provided additional fish for release that would not have been available otherwise, overall the CBP performed poorly and below expectations compared with the HOR group, both within the hatchery and after release. The captive broodstock program provided a short-term demographic boost, most notable in the 2008–2010 return years, but the benefit did not carry over after the program ended.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

Sequence Analysis of 20,453 Severe Acute Respiratory Syndrome Coronavirus 2 Genomes from the Houston Metropolitan Area Identifies the Emergence and Widespread Distribution of Multiple Isolates of All Major Variants of Concern

Since the beginning of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic, there has been international concern about the emergence of virus variants with mutations that increase transmissibility, enhance escape from the human immune response, or otherwise alter biologically important phenotypes. In late 2020, several variants of concern emerged globally, including the UK variant (B.1.1.7), the South Africa variant (B.1.351), Brazil variants (P.1 and P.2), and two related California variants of interest (B.1.429 and B.1.427). These variants are believed to have enhanced transmissibility. For the South Africa and Brazil variants, there is evidence that mutations in spike protein permit it to escape from some vaccines and therapeutic monoclonal antibodies. On the basis of our extensive genome sequencing program involving 20,453 coronavirus disease 2019 patient samples collected from March 2020 to February 2021, we report identification of all six of these SARS-CoV-2 variants among Houston Methodist Hospital (Houston, TX) patients residing in the greater metropolitan area. Although these variants are currently at relatively low frequency (aggregate of 1.1%) in the population, they are geographically widespread. Houston is the first city in the United States in which active circulation of all six current variants of concern has been documented by genome sequencing. Finally, as vaccine deployment accelerates, increased genomic surveillance of SARS-CoV-2 is essential to understanding the presence, frequency, and medical impact of consequential variants and their patterns and trajectory of dissemination.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2021

Synthetic proteins for COVID-19 diagnostics

There is an urgent need for inexpensive, rapid and specific antigen-based assays to test for vaccine efficacy and detect infection with SARS-CoV-2 and its variants. We have identified a small, synthetic protein (JS7), representing a region of maximum variability within the receptor binding domain (RBD), which binds antibodies in sera from nine patients with PCR-verified COVID-19 of varying severity. Antibodies binding to either JS7 or the SARS-CoV-2 recombinant RBD, as well as those that disrupt binding between a fragment of the ACE2 receptor and the RBD, are proportional to disease severity and clinical outcome. Binding to JS7 was inhibited by linear peptides from the RBD interface with ACE2. Variants of JS7, such as E484K or N501Y, can be quickly synthesized in pure form in large quantities by automated methods. JS7 and related synthetic antigens can provide a basis for specific diagnostics for SARS-CoV-2 infections.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2024

Protein data bank: From two epidemics to the global pandemic to mRNA vaccines and Paxlovid

Structural biologists and the open-access Protein Data Bank (PDB) played decisive roles in combating the COVID-19 pandemic. Global biostructure data were turned into global knowledge, allowing scientists and engineers to understand the inner workings of coronaviruses and develop effective countermeasures. Two mRNA vaccines, initially designed with guidance from PDB structures of the SARS-CoV-1 and MERS-CoV spike proteins, prevented infections entirely or reduced the likelihood of morbidity and mortality for more than five billion individual recipients worldwide. Structure-guided drug discovery by Pfizer, Inc (facilitated by PDB structures), initiated in the 2000s in response to SARS-CoV-1 and resumed in 2020, yielded nirmatrelvir (the active ingredient of Paxlovid) -- a potent, orally-bioavailable inhibitor of the SARS-CoV-2 main protease. You've got to love the Protein Data Bank!

Burley, Stephen K.↗
DOE OSTI2024

Pronounced reduction in the regeneration energy of potassium sarcosinate CO 2 capture solvent using TiO 2

Absorption-based CO 2 capture technologies face economic feasibility concerns due to the exceedingly high energy requirements of solvent regeneration. Among various proposed solutions, solid acid-aided solvent regeneration stands out as a promising approach. Studies have shown that solid materials containing Lewis and Brønsted acid sites can facilitate deprotonation of protonated amine and breakdown of carbamate molecules, which significantly increases CO 2 desorption rate and decreases regeneration energy of common solvents such as MEA and DEA. However, the influence of solid acids on alternate solvents such as amino acids is not well known. Here, we report the performance of TiO 2 for the regeneration of CO 2 -loaded aqueous potassium sarcosinate (K-Sar) solvent. K-Sar is an environmentally friendly amino-acid salt that provides high CO 2 absorption rates, making it a good candidate for both point-source and direct-air capture. TiO 2 is hydrothermally stable and contains high surface acid site concentration. Desorption of CO 2 from K-Sar starts at room temperature in the presence of TiO 2 , while such onset temperature is greater than 70°C for regeneration without TiO 2 . Further, at a temperature of 95°C, the maximum CO 2 desorption rate and cumulative CO 2 removal increase by 128% and 91%, respectively, in the presence of TiO 2 compared to the no TiO 2 case. The total regeneration energy could be reduced by ~ 50% with TiO 2 , showcasing the significant role this process can take in improving the commercial competitiveness of absorption-based CO 2 capture. Further characterization with XRD, SEM, and NMR concluded that neither the TiO 2 powder nor the solvent undergoes any physical or chemical degradation in the regeneration process, suggesting the potential of their long-term usability.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2020

A 3.4-Å cryo-electron microscopy structure of the human coronavirus spike trimer computationally derived from vitrified NL63 virus particles

Human coronavirus NL63 (HCoV-NL63) is an enveloped pathogen of the family Coronaviridae that spreads worldwide and causes up to 10% of all annual respiratory diseases. HCoV-NL63 is typically associated with mild upper respiratory symptoms in children, elderly and immunocompromised individuals. It has also been shown to cause severe lower respiratory illness. NL63 shares ACE2 as a receptor for viral entry with SARS-CoV-1 and SARS-CoV-2. Here we present the in situ structure of HCoV-NL63 spike (S) trimer at 3.4-Å resolution by single-particle cryo-EM imaging of vitrified virions without chemical fixative. It is structurally homologous to that obtained previously from the biochemically purified ectodomain of HCoV-NL63 S trimer, which displays a 3-fold symmetric trimer in a single conformation. In addition to previously proposed and observed glycosylation sites, our map shows density at other sites, as well as different glycan structures. The domain arrangement within a protomer is strikingly different from that of the SARS-CoV-2 S and may explain their different requirements for activating binding to the receptor. Overall, this structure provides the basis for future studies of spike proteins with receptors, antibodies, or drugs, in the native state of the coronavirus particles.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

Protein Surface Printer for Exploring Protein Domains

The surface of proteins is vital in determining protein functions. Herein, a program, Protein Surface Printer (PSP), is built that performs multiple functions in quantifying protein surface domains. Two proteins, PETase and cytochrome P450, are used to validate that the program supports atomistic simulations with different combinations of programs and force fields. A case study is conducted on the structural analysis of the spike proteins of SARS-CoV-2 and SARS-CoV and the human cell receptor ACE2. Although the surface domains of both spike proteins are highly similar, their receptor-binding domains (RBDs) and the O-linked glycan domains are structurally different. The O-linked glycan domain of SARS-CoV-2 is highly positively charged, which may promote binding to negatively charged human cells.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗