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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 1,711 records · Page 95
All sourcesNASA NTRSDOE OSTI
DOE OSTI2016

An adaptive tau-leaping method for stochastic simulations of reaction-diffusion systems

Stochastic modelling is critical for studying many biochemical processes in a cell, in particular when some reacting species have low population numbers. For many such cellular processes the spatial distribution of the molecular species plays a key role. The evolution of spatially heterogeneous biochemical systems with some species in low amounts is accurately described by the mesoscopic model of the Reaction-Diffusion Master Equation. The Inhomogeneous Stochastic Simulation Algorithm provides an exact strategy to numerically solve this model, but it is computationally very expensive on realistic applications. We propose a novel adaptive time-stepping scheme for the tau-leaping method for approximating the solution of the Reaction-Diffusion Master Equation. This technique combines effective strategies for variable time-stepping with path preservation to reduce the computational cost, while maintaining the desired accuracy. The numerical tests on various examples arising in applications show the improved efficiency achieved by the new adaptive method.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2016

Optimizing single-nanoparticle two-photon microscopy by in situ adaptive control of femtosecond pulses

Single-nanoparticle two-photon microscopy shows great application potential in super-resolution cell imaging. Here, we report in situ adaptive optimization of single-nanoparticle two-photon luminescence signals by phase and polarization modulations of broadband laser pulses. For polarization-independent quantum dots, phase-only optimization was carried out to compensate the phase dispersion at the focus of the objective. Enhancement of the two-photon excitation fluorescence intensity under dispersion-compensated femtosecond pulses was achieved. For polarization-dependent single gold nanorod, in situ polarization optimization resulted in further enhancement of two-photon photoluminescence intensity than phase-only optimization. The application of in situ adaptive control of femtosecond pulse provides a way for object-oriented optimization of single-nanoparticle two-photon microscopy for its future applications.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2018

Gyroaveraging operations using adaptive matrix operators

A new adaptive scheme to be used in particle-in-cell codes for carrying out gyroaveraging operations with matrices is presented. This new scheme uses an intermediate velocity grid whose resolution is adapted to the local thermal Larmor radius. The charge density is computed by projecting marker weights in a field-line following manner while preserving the adiabatic magnetic moment μ. These choices permit to improve the accuracy of the gyroaveraging operations performed with matrices even when strong spatial variation of temperature and magnetic field is present. Accuracy of the scheme in different geometries from simple 2D slab geometry to realistic 3D toroidal equilibrium has been studied. As a result, a successful implementation in the gyrokinetic code XGC is presented in the delta-f limit.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2018

Highly parallelisable simulations of time-dependent viscoplastic fluid flow with structured adaptive mesh refinement

We present the extension of an efficient and highly parallelisable framework for incompressible fluid flow simulations to viscoplastic fluids. The system is governed by incompressible conservation of mass, the Cauchy momentum equation, and a generalised Newtonian constitutive law. In order to simulate a wide range of viscoplastic fluids, we employ the Herschel-Bulkley model for yield-stress fluids with nonlinear stress-strain dependency above the yield limit. We utilise Papanastasiou regularisation in our algorithm to deal with the singularity in apparent viscosity. The resulting system of partial differential equations is solved using the IAMR (Incompressible Adaptive Mesh Refinement) code, which uses second-order Godunov methodology for the advective terms and semi-implicit diffusion in the context of an approximate projection method to solve adaptively refined meshes. By augmenting the IAMR code with the ability to simulate regularised Herschel-Bulkley fluids, we obtain efficient numerical software for time-dependent viscoplastic flow in three dimensions, which can be used to investigate systems not considered previously due to computational expense. We validate results from simulations using this new capability against previously published data for Bingham plastics and power-law fluids in the two-dimensional lid-driven cavity. In doing so, we expand the range of Bingham and Reynolds numbers which have been considered in the benchmark tests. Moreover, extensions to time-dependent flow of Herschel-Bulkley fluids and three spatial dimensions offer new insights into the flow of viscoplastic fluids in this test case, and we provide missing benchmark results for these extensions.

42 ENGINEERING↗
DOE OSTI2019

Neural network based quasi-diabatic Hamiltonians with symmetry adaptation and a correct description of conical intersections

Previously, we demonstrated in a report that artificial neural networks (NNs) can be used to generate quasidiabatic Hamiltonians (H d ) that are capable of representing adiabatic energies, energy gradients, and derivative couplings. In this work, two additional issues are addressed. First, symmetry-adapted functions such as permutation invariant polynomials are introduced to account for complete nuclear permutation inversion symmetry. Second, a partially diagonalized representation is introduced to facilitate a better description of near degeneracy points. The diabatization of 1, 2 1 A states of NH 3 is used as an example. The NN fitting findings are compared to that of a previous fitting with symmetry adapted polynomials.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2022

Design and experimental demonstration of feedback adaptive RMP ELM controller toward complete long pulse ELM suppression on KSTAR

Operation of a fusion power plant requires robust edge localized mode (ELM) suppression simultaneously with high plasma performance. In this study, we describe a novel feedback adaptive resonant magnetic perturbation (RMP) ELM controller designed to address this problem by achieving optimized ELM suppression through the advanced application of 3D RMPs. From real-time $D_α$ data, the controller is achievable robust ELM suppression while simultaneously minimizing the applied RMP in order to enhance plasma performance. In real time, the instantaneous ELM-frequency is analyzed with an adaptive feedback algorithm to determine amplitudes and phases of RMP coil currents that will maximize plasma performance while maintaining ELM suppression. When applied through the KSTAR plasma control system in several experiments using $textiti{n}$ = 1 RMPs, robust ELM suppression is achieved and sustained in feedback while reducing the RMP strength to ~65% of its initial value. Minimization of the RMP strength in this manner not only allows for operation of longer discharges due to a decrease in flux consumption but also allows for a strong recovery of up to ~60% of $β_N$ throughout the ELM-free period.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2023

A parallel, distributed memory implementation of the adaptive sampling configuration interaction method

The many-body simulation of quantum systems is an active field of research that involves several different methods targeting various computing platforms. Many methods commonly employed, particularly coupled cluster methods, have been adapted to leverage the latest advances in modern high-performance computing. Selected configuration interaction (sCI) methods have seen extensive usage and development in recent years. However, the development of sCI methods targeting massively parallel resources has been explored only in a few research works. Here, we present a parallel, distributed memory implementation of the adaptive sampling configuration interaction approach (ASCI) for sCI. In particular, we will address the key concerns pertaining to the parallelization of the determinant search and selection, Hamiltonian formation, and the variational eigenvalue calculation for the ASCI method. Load balancing in the search step is achieved through the application of memory-efficient determinant constraints originally developed for the ASCI-PT2 method. The presented benchmarks demonstrate near optimal speedup for ASCI calculations of Cr 2 (24e, 30o) with 10 6 , 10 7 , and 3 × 10 8 variational determinants on up to 16 384 CPUs. Importantly, to the best of the authors’ knowledge, this is the largest variational ASCI calculation to date.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2025

RANGE: A robust adaptive nature-inspired global explorer of potential energy surfaces

With the growing demand for realistic representations of chemical structures and the advent of exascale computing, the intelligent sampling of potential energy surfaces and efficient identification of global minima have become more essential but also more feasible. Building on prior studies demonstrating the efficiency of the Artificial Bee Colony (ABC) swarm intelligence algorithm, we report a hybrid metaheuristic framework that integrates the adaptive exploration capabilities of ABC coupled with the exploitation strengths of genetic algorithms (GA) in a scalable, Python-based implementation. The resulting tool, RANGE (Robust Adaptive Nature-inspired Global Explorer), provides seamless interfaces to multiple potential energy evaluators, either directly or via widely used Python libraries, and is designed for high-performance computing environments. We describe the implementation details of RANGE and evaluate its performance, relative to ABC- or GA-alone based algorithms, on a variety of chemical systems, including molecular clusters and heterogeneous surfaces. In conclusion, our results demonstrate RANGE’s efficiency, robustness, and broad applicability in addressing challenging global optimization problems in computational chemistry and materials science.

Algorithms and data structure↗
DOE OSTI2014

Laser adaptive holographic system for microweighing of nanoobjects

A system for measuring the mass of micro- and nanoobjects based on resonance microweighing using the principles of adaptive holographic interferometry is proposed and experimentally implemented. The sensitive element of the system is a microcantilever to which the objects to be weighted are attached. The eigenoscillations of the microcantilever are excited with a laser pulse. The detection of oscillations is implemented using the adaptive holographic interferometer, the key element of which, the dynamic hologram, is formed in the photorefractive crystal CdTe. The detected variation in mass of the particles, attached to the microcantilever, amounted to (420 ± 9) × 10{sup -12} g, the measurement error being 8.5 × 10{sup -12} g. The sensitivity of the measurement system is 1.7 × 10{sup -12} Hz g{sup -1}. The possibility of increasing the sensitivity of the system by 6.5 × 10{sup 6} times and reducing the mass detection threshold by 1.5 × 10{sup 7} times by microcantilevers of submicron size is experimentally demonstrated. (nanoobjects)

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2015

Dependence of the compensation error on the error of a sensor and corrector in an adaptive optics phase-conjugating system

In the framework of a statistical model of an adaptive optics system (AOS) of phase conjugation, three algorithms based on an integrated mathematical approach are considered, each of them intended for minimisation of one of the following characteristics: the sensor error (in the case of an ideal corrector), the corrector error (in the case of ideal measurements) and the compensation error (with regard to discreteness and measurement noises and to incompleteness of a system of response functions of the corrector actuators). Functional and statistical relationships between the algorithms are studied and a relation is derived to ensure calculation of the mean-square compensation error as a function of the errors of the sensor and corrector with an accuracy better than 10%. Because in adjusting the AOS parameters, it is reasonable to proceed from the equality of the sensor and corrector errors, in the case the Hartmann sensor is used as a wavefront sensor, the required number of actuators in the absence of the noise component in the sensor error turns out 1.5 – 2.5 times less than the number of counts, and that difference grows with increasing measurement noise. (adaptive optics)

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
DOE OSTI2016

Compensation for nonlinear effects in an optical orthogonal frequency-division multiplexed signal using adaptive modulation

We study the influence of nonlinear effects on symbol error statistics when a 16-QAM orthogonal frequency-division multiplexed signal is transmitted in a 1000 km length of fibre. A technique of adaptive modulation is proposed for generating signals that are resistant to nonlinear distortions. A considerable improvement of the transmission quality is shown to take effect in using an adaptive modulation scheme. (paper)

42 ENGINEERING↗
DOE OSTI2017

New adaptive optics control strategy for petawatt-class laser chains

A new generation of ultra-high intensity femtosecond petawatt- and above-class lasers requires new approaches to wavefront corrections. New challenges for adaptive optics consist in overcoming the constraints of potentially bigger diameters, larger amplitude aberrations, faster optics, higher risk of damaging optical components and faster and easier maintenance. Here we present a new technology of a mechanical deformable mirror, which has a large stroke, high temporal stability, low hysteresis, no print-through effect, easy, safe and fast maintenance and an operating frequency up to 10 Hz. We propose the full correction of the final focal spot in the target chamber by a combination of a standard adaptive optics system, a simple focal plane camera and a phase retrieval correction process. We test the reliability of the correction system in terms of intensity variation and wavefront stability. We further verify correction robustness of the method on a large spectral bandwidth and finally perform a focal spot correction on a terawatt laser system in both low and high-power regimes. (paper)

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2019

Adaptive correction of the image of an incoherent source object

The paper examines the operation of an optical system forming an image of an incoherent source object under conditions of atmospheric noise. The effect of atmospheric turbulence is considered. The calculations are performed in the Fresnel – Huygens approximation. The characteristics of the image for ‘long’ and ‘short’ exposures are investigated. The issues related to the adaptive correction of the general light wavefront slopes are discussed. The limits of applicability of phase adaptive correction using a reference source are shown. (paper)

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2020

Laser adaptive holographic hydroacoustic intensimeter

A new type of a vector hydrophone, a laser adaptive hydroacoustic intensimeter, is investigated. Two identical, spatially separated coil-type sensors are used as a primary receiver of the acoustic signal. The signals received at the sensor output are phase demodulated in a two-channel adaptive holographic interferometer based on two dynamic holograms multiplexed in a CdTe photorefractive crystal. Using a laser intensimeter, the acoustic field formed in a limited volume is studied. The performance characteristics of the intensimeter are determined experimentally; its threshold sensitivity, according to the acoustic field intensity, constitutes 0.1 × 10{sup −13} W m{sup −2}. (laser applications)

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
DOE OSTI2020

Peculiarities of adaptive phase correction of optical wave distortions under conditions of ‘strong’ intensity fluctuations

The reason for the loss of efficiency of adaptive phase correction in the propagation of optical waves in a turbulent atmosphere under conditions of ‘strong’ intensity fluctuations is experimentally explained for the first time. Based on the data from experiments conducted on both horizontal and vertical atmospheric paths, we have found that intensity fluctuations begin to significantly affect phase measurements when the coherence radius of the optical wave becomes less than the radius of the first Fresnel zone. Under these conditions, the main meter of adaptive optics systems, i. e. the Hartmann sensor, no longer provides correct measurements of the phase distribution in the presence of deep amplitude modulation. Based on the study of the behaviour of the mode components of the phase fluctuations reconstructed from the results of measurements in various operating regimes, we have found that, first of all, the amplitudes of the lowest modes of phase fluctuation expansion (tilts, defocusing, and astigmatism) are distorted, which, as the analysis shows, is very different from the regime of weak fluctuations. (atmospheric optics)

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2015

Horizontal gene transfer and gene dosage drives adaptation to wood colonization in a tree pathogen

Some of the most damaging tree diseases are caused by pathogens that induce cankers, a stem deformation often lethal. To investigate the cause of this adaptation, we sequenced the genomes of poplar pathogens that do and do not cause cankers. We found a unique cluster of genes that produce secondary metabolites and are co-activated when the canker pathogen is grown on poplar wood and leaves. The gene genealogy is discordant with the species phylogeny, showing a signature of horizontal transfer from fungi associated with wood decay. Furthermore, genes encoding hemicellulose-degrading enzymes are up-regulated on poplar wood chips, with some having been acquired horizontally. In conclusion, we propose that adaptation to colonize poplar woody stems is the result of acquisition of these genes.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2026

Adapting Nuclear Forensics from Light Water to Molten Salt Reactors: A Survey of Emerging Needs

Rising interest in molten salt reactors for commercial power production presents an opportunity to evaluate the techniques used to characterize materials of nuclear forensic interest. Since extensive research has been performed to identify and develop signatures of light water reactor (LWR) materials (e.g. uranium ore concentrates and uranium dioxide fuel pellets), we use this as a basis to explore possibilities for molten salt signature development. Through this comparative method, nuclear forensic signatures used today to identify the provenance of nuclear materials found out of regulatory control are adapted to molten salt reactor (MSR) fuel cycle materials. Radiological, elemental composition, isotopic composition, and model age signatures will likely not need large adaptations before being applied to MSR materials but may need to expand to be applicable to both thorium- and uranium-fueled systems. The liquid nature of molten salt fuel may erase signatures related to production and irradiation history that are informative for typical LWR materials. However, it may also lead to opportunities for new signatures, such as cooling rate–controlled morphology. Targets identified for further research include radiological attributes of fuel salts; elemental, chemical, and isotopic analysis of salts with differing production routes; morphological effects of various thermodynamic environments; and relevant fuel cycle radiochronometers. Additionally, the comparative nature of the proposed signatures implies a need for MSR-relevant databases and the production of salt standard reference materials.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗
DOE OSTI2016

Adaptive Sequential Monte Carlo for Multiple Changepoint Analysis

Process monitoring and control requires detection of structural changes in a data stream in real time. This paper introduces an efficient sequential Monte Carlo algorithm designed for learning unknown changepoints in continuous time. The method is intuitively simple: new changepoints for the latest window of data are proposed by conditioning only on data observed since the most recent estimated changepoint, as these observations carry most of the information about the current state of the process. The proposed method shows improved performance over the current state of the art. Another advantage of the proposed algorithm is that it can be made adaptive, varying the number of particles according to the apparent local complexity of the target changepoint probability distribution. This saves valuable computing time when changes in the changepoint distribution are negligible, and enables re-balancing of the importance weights of existing particles when a significant change in the target distribution is encountered. The plain and adaptive versions of the method are illustrated using the canonical continuous time changepoint problem of inferring the intensity of an inhomogeneous Poisson process, although the method is generally applicable to any changepoint problem. Performance is demonstrated using both conjugate and non-conjugate Bayesian models for the intensity. Lastly, appendices to the article are available online, illustrating the method on other models and applications.

97 MATHEMATICS AND COMPUTING↗