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At least 1,693 records · Page 94

Global Warming Estimation from MSU

Microwave Sounding Unit (MSU) radiometer observations in Ch 2 (53.74 GHz) from sequential, sun-synchronous, polar-orbiting NOAA satellites contain small systematic errors. Some of these errors are time-dependent and some are time-independent. Small errors in Ch 2 data of successive satellites arise from calibration differences. Also, successive NOAA satellites tend to have different Local Equatorial Crossing Times (LECT), which introduce differences in Ch 2 data due to the diurnal cycle. These two sources of systematic error are largely time independent. However, because of atmospheric drag, there can be a drift in the LECT of a given satellite, which introduces time-dependent systematic errors. One of these errors is due to the progressive chance in the diurnal cycle and the other is due to associated chances in instrument heating by the sun. In order to infer global temperature trend from the these MSU data, we have eliminated explicitly the time-independent systematic errors. Both of the time-dependent errors cannot be assessed from each satellite. For this reason, their cumulative effect on the global temperature trend is evaluated implicitly. Christy et al. (1998) (CSL). based on their method of analysis of the MSU Ch 2 data, infer a global temperature cooling trend (-0.046 K per decade) from 1979 to 1997, although their near nadir measurements yield near zero trend (0.003 K/decade). Utilising an independent method of analysis, we infer global temperature warmed by 0.12 +/- 0.06 C per decade from the observations of the MSU Ch 2 during the period 1980 to 1997.

Prabhakara, C.↗

Tracking motions from satellite water vapor imagery: Quantitative applications to hurricane track forecasting

Water vapor imagery from GOES satellites has been available for over a decade. These data are used extensively, mainly in a qualitative mode, by forecasters in the United States (Weldon and Holmes, 1991). Some attempts have been made at quantifying the data by tracking features in time sequences of the imagery (Stewart et al., 1985; Hayden and Stewart, 1987). For a variety of reasons, applications of this approach have produced marginal results (Velden, 1990). Recently, METEOSAT-3 (M-3) was repositioned at 50W by the European Space Agency, in order to provide complete coverage of the Atlantic Ocean. Data from this satellite are being transmitted to the U.S. for operational use. Compared with the GOES satellite, the M-3 has a superior resolution and signal-to-noise ratio in its water vapor channel, which translates into improved automated tracking capabilities. During a period in 1992 which included the Atlantic hurricane season, water vapor tracking algorithms were applied to the M-3 data in order to evaluate the coverage, accuracy and model impact of the derived vectors. Data sets were produced during several tropical cyclone cases, including Hurricane Andrew. In this paper, the M-3 water vapor wind sets are assessed, and their impact on a hurricane track forecast model is examined.

Velden, Christopher↗

Preparations for Integrating Space-Based Total Lightning Observations into Forecast Operations

NASA's Short-term Prediction Research and Transition (SPoRT) Center has been a leader in collaborating with the United States National Weather Service (NWS) offices to integrate ground-based total lightning (intra-cloud and cloud-to-ground) observations into the real-time operational environment. For much of these collaborations, the emphasis has been on training, dissemination of data to the NWS AWIPS system, and focusing on the utility of these data in the warning decision support process. A shift away from this paradigm has occurred more recently for several reasons. For one, SPoRT's collaborations have expanded to new partners, including emergency managers and the aviation community. Additionally, and most importantly, is the impending launch of the GOES-R Geostationary Lightning Mapper (GLM). This has led to collaborative efforts to focus on additional forecast needs, new data displays, develop training for GLM uses based on the lessons learned from ground-based lightning mapping arrays, and ways to better relate total lightning data to other meteorological parameters. This presentation will focus on these efforts to prepare the operational end user community for GLM with an eye towards sharing lessons learned as EUMETSAT prepares for the Meteosat Third Generation Lightning Imager. This will focus on both software and training needs. In particular, SPoRT has worked closely with the Meteorological Development Laboratory to create the total lightning tracking tool. This software allows for NWS forecasters to manually track storms of interest and display a time series trend of observations. This tool also has been expanded to work on any gridded data set allowing for easy visual comparisons of multiple parameters in addition to total lightning. A new web display has been developed for the ground-based observations that can be easily extended to satellite observations. This paves the way for new collaborations outside of the NWS, both domestically and internationally, as the web display will be functional on PCs and mobile devices. Furthermore, SPoRT has helped developed the software plug-in to visualize GLM data. Examples using the official GLM proxy product will be used to provide a glimpse as to what real-time GLM and likely MTG-LI data will be in the near future.

GLM↗

Evaluation of Differential Peptide Loading on Tandem Mass Tag-Based Proteomic and Phosphoproteomic Data Quality

Global and phosphoproteome profiling has demonstrated great utility for the analysis of clinical specimens. One major barrier to the broad clinical application of proteomic profiling is the large amount of biological material required, particularly for phosphoproteomics—currently on the order of 25 mg wet tissue weight, depending on tissue type. For hematopoietic cancers such as acute myeloid leukemia (AML), the sample requirement is in excess of 10 million (1E7) peripheral blood mononuclear cells (PBMCs). Throughout the course of a prospective study, this requirement will certainly exceed what is obtainable from many of the individual patients/timepoints. For this reason, we were interested in examining the impact of differential peptide loading across multiplex channels on proteomic data quality. Methods: To achieve this, we tested a range of channel loading amounts (20, 40, 100, 200, and 400 µg of tryptic peptides, or approximately the material obtainable from 5E5, 1E6, 2.5E6, 5E6, and 1E7 AML patient cells) to assess proteome coverage, quantification reproducibility and accuracy in experiments utilizing isobaric tandem mass tag (TMT) labeling. As expected, we found that fewer missing values are observed in TMT channels with higher peptide loading amounts compared to those with lower loading. Moreover, channels with lower loading amounts have greater quantitative variability than channels with higher loading amounts. Statistical analysis of the differences in means among the five loading groups showed that the 20 µg loading group was significantly different from the 400 µg loading group. However, no significant differences were detected among the 40, 100, 200 and 400 µg loading groups. Conclusions: These assessment data demonstrate the practical limits of loading differential quantities of peptides across channels in TMT multiplexes, and provide a basis for designing the optimal clinical proteomics study when specimen quantities are limited.

59 BASIC BIOLOGICAL SCIENCES↗

Canopy reflectance modeling in a tropical wooded grassland

The Li-Strahler canopy reflectance model, driven by LANDSAT Thematic Mapper (TM) data, provided regional estimates of tree size and density in two bioclimatic zones in Africa. This model exploits tree geometry in an inversion technique to predict average tree size and density from reflectance data using a few simple patameters measured in the field and in the imagery. Reflectance properties of the trees were measured in the study sites using a pole-mounted radiometer. The measurements showed that the assumptions of the simple Li-Strahler model are reasonable for these woodlands. The field radiometer measurements were used to calculate the normalized difference vegetation index (NDVI), and the integrated NDVI over the canopy was related to crown volume. Predictions of tree size and density from the canopy model were used with allometric equations from the literature to estimate woody biomass and potential foliar biomass for the sites and for the regions. Estimates were compared with independent measurements made in the Sahelian sites, and to typical values from the literature for these regions and for similar woodlands. In order to apply the inversion procedure regionally, an area must first be stratified into woodland cover classes, and dry-season TM data were used to generate a stratum map of the study areas with reasonable accuracy. The method used was unsupervised classification of multi-data principal components images.

Simonett, David↗

Data-assisted combustion simulations with dynamic submodel assignment using random forests

This investigation outlines a data-assisted approach that employs random forest classifiers for local and dynamic submodel assignment in turbulent-combustion simulations. This method is demonstrated in simulations of a single-element GOX/GCH4 rocket combustor; a priori as well as a posteriori assessments are conducted to (i) evaluate the accuracy and adjustability of the classifier for targeting different quantities of interest (QoIs), and (ii) assess improvements, resulting from the data-assisted combustion model assignment, in predicting target QoIs during simulation runtime. Results from the a priori study show that random forests, trained with local flow properties as input variables and combustion model errors as training labels, assign three different combustion models – finite-rate chemistry (FRC), flamelet progress variable (FPV) model, and inert mixing (IM) – with reasonable classification performance even when targeting multiple QoIs. Applications in a posteriori studies demonstrate improved predictions from data-assisted simulations, in temperature and CO mass fraction, when compared with monolithic FPV calculations. An additional a posteriori data-assisted simulation of a modified configuration demonstrates that the present approach can be successfully applied to different configurations, as long as thermophysical behavior can be represented by the training data. Furthermore, these results demonstrate that this data-driven framework holds promise for dynamic combustion submodel assignments in reacting flow simulations.

42 ENGINEERING↗

First data and preliminary experimental results from a new Doppler backscattering system on the MAST-U spherical tokamak

Abstract A new Doppler backscattering (DBS) system, consisting of Q-band and V-band, has been installed and achieved its first data on the MAST-U spherical tokamak. The Q-band and V-band have separate microwave source systems, but share the same optical front-end components. The Q-band and V-band sources simultaneously generate eight (34, 36, 38, 40, 42, 44, 46 and 48 GHz) and seven (52.5, 55, 57.5, 60, 62.5, 65 and 67.5 GHz) fixed frequency probe beams, respectively. These frequencies provide a large range of radial positions from the low-field-side edge plasma to the core, and possibly to the high-field-side edge, depending on the plasma conditions. The quasi-optical system consists of a remotely-tunable polarizer, a focusing lens and a remotely-steerable mirror. By steering the mirror, the system provides remote control of the probed density fluctuation wavenumber, and allow the launch angle to match the magnetic field. The range of accessible turbulence wavenumbers (k θ ) is reasonably large with normalized wavenumberk θ ρ s ranging from <0.5 to 9. The first data acquired by this DBS system is validated by comparing with the data from the other DBS system on MAST-U (introduced in ref. [21]). An example of measuring the velocity profile spanning from the edge to the center in a high-density plasma is presented, indicating the robust capabilities of the integrated Q-band and V-band DBS systems.

Instruments & Instrumentation↗

Cloud optical parameters as derived from the multispectral cloud radiometer

Here, researchers analyze the data taken in the marine stratocumulus intensive field observation component of the First ISCCP Regional Experiment (FIRE), conducted off the California coast in July, 1987 using the Multispectral Cloud Radiometer (MCR). Researchers installed an efficient retrieval scheme for deriving the cloud optical thickness and droplet mode radius, and have described the behavior of the retrieval error. Generally the scheme can retrieve the optical thickness and mode radius adequately unless they are too small; the use of the forward scattering region is more sound than the use of the backscattering portion. Applying the method to real data, researchers derived the two-dimensional distribution of optical thickness and mode radius for a portion of one of the FIRE marine stratocumulus missions. In this case study, the droplet size showed a more uniform distribution than optical thickness with some correlation between large droplet size and small optical thickness. Although researchers can find microphysical reasons for these tendencies, they suspect that the remotely sensed droplet size may be overestimated. As a future problem, they will compare results with in situ data of the droplet size distribution. Also it will be very important to check several reasons why the droplet radius might be overestimated, e.g., soot contamination, effect of escaping photons from the lateral sides of broken clouds, and so on.

Nakajima, Eruyuki↗

Interplanetary and Interstellar Dust Particles: Reentry Heating and Capture in Aerogel

Studies of interplanetary and interstellar dust can provide significant information on the evolution of the solar system or stars, respectively. However, for reliable analysis it is crucial to know how the particles have been modified during reentry (in the case of interplanetary dust particles, or [DP's) and impact into the capture medium. In the case of stratospheric capture, particles will be heated by atmospheric drag. Subsequent capture of the particles will result in heating, ablation, accretion of the capture medium and possible fragmentation. Modeling of these processes is a useful way of assessing their effects on the interpretation of the compositional data for these particles. Previous work on reentry heating has shown that heat diffusion alone cannot adequately account for temperature gradients observed in IDP's. In fact, for any reasonable thermal parameters, calculations show the particles to be nearly isothermal. Here we extend those studies to include phase transitions. These preliminary results are promising and show a significant temperature gradient for a 100 micron (diameter) particle. The actual capture of the particles in silica aerogel is being modeled using a comprehensive shock hydrodynamic code (called CTH). Various options of this code were investigated to attempt to make the most appropriate choice of methods of impact, equations of state, and processes of energy transfer from capture material to particle. The initial calculations with the code used only 'reasonable' estimates for the physical parameters of silica aerogel. Through the literature searches and personal contacts with the knowledgeable scientists, the best possible mechanical and thermal data have been made available for these computations.

Szydlik, Paul P.↗

Diagnostic tolerance for missing sensor data

For practical automated diagnostic systems to continue functioning after failure, they must not only be able to diagnose sensor failures but also be able to tolerate the absence of data from the faulty sensors. It is shown that conventional (associational) diagnostic methods will have combinatoric problems when trying to isolate faulty sensors, even if they adequately diagnose other components. Moreover, attempts to extend the operation of diagnostic capability past sensor failure will necessarily compound those difficulties. Model-based reasoning offers a structured alternative that has no special problems diagnosing faulty sensors and can operate gracefully when sensor data is missing.

Scarl, Ethan A.↗

CFD Predictions of Soot & CO Emissions Generated by a Partially-Fueled 9-Element Lean-Direct Injection Combustor

A study was undertaken to investigate the CO & soot emissions generated by a partially-fueled 9- element LDI (Lean-Direct Injection) combustor configuration operating in the idle range of jet engine conditions. In order to perform the CFD analysis, several existing soot/chemistry models were implemented into the OpenNCC (Open National Combustion Code). The calculations were based on a Reynolds-Averaged Navier Stokes (RANS) simulation with standard k-epsilon turbulence model, a 62- species jet-a/air chemistry, a 2-equation soot model, & a Lagrangian spray solver. A separate transport equation was solved for all individual species involved in jet-a/air combustion. In the test LDI configuration we examined, only five of the nine injectors were fueled with the major pilot injector operating at an equivalence ratio of near one and the other four main injectors operating at an equivalence ratio near 0.55. The calculations helped to identify several reasons behind the soot & CO formation in different regions of the combustor. The predicted results were compared with the reported experimental data on soot mass concentration (SMC) & emissions index of CO (EICO). The experimental results showed that an increase in either T3 and/or F/A ratio lead to a reduction in both EICO & SMC. The predicted results were found to be in reasonable agreement. However, the predicted EICO differed substantially in one test condition associated with higher F/A ratio.

Raju, M. S.↗

Classifying and analyzing small-angle scattering data using weighted k nearest neighbors machine learning techniques

A consistent challenge for both new and expert practitioners of small-angle scattering (SAS) lies in determining how to analyze the data, given the limited information content of said data and the large number of models that can be employed. Machine learning (ML) methods are powerful tools for classifying data that have found diverse applications in many fields of science. Here, ML methods are applied to the problem of classifying SAS data for the most appropriate model to use for data analysis. The approach employed is built around the method of weighted k nearest neighbors (wKNN), and utilizes a subset of the models implemented in the SasView package (https://www.sasview.org/) for generating a well defined set of training and testing data. The prediction rate of the wKNN method implemented here using a subset of SasView models is reasonably good for many of the models, but has difficulty with others, notably those based on spherical structures. A novel expansion of the wKNN method was also developed, which uses Gaussian processes to produce local surrogate models for the classification, and this significantly improves the classification accuracy. Further, by integrating a stochastic gradient descent method during post-processing, it is possible to leverage the local surrogate model both to classify the SAS data with high accuracy and to predict the structural parameters that best describe the data. The linking of data classification and model fitting has the potential to facilitate the translation of measured data into results for both novice and expert practitioners of SAS.

97 MATHEMATICS AND COMPUTING↗

Simplified Micromechanics of Plain Weave Composites

A micromechanics based methodology to simulate the complete hygro-thermomechanical behavior of plain weave composites is developed. This methodology is based on micromechanics and the classical laminate theory. The methodology predicts a complete set of thermal, hygral and mechanical properties of plain woven composites, generates necessary data for use in a finite element structural analysis, and predicts stresses all the way from the laminate to the constituent level. This methodology is used in conjunction with a composite mechanics code to analyze and predict the properties/response of a generic graphite/epoxy woven textile composite and a plain weave ceramic composite. The fiber architecture, including the fiber waviness and fiber end distributions through the thickness, is properly accounted for. Predicted results compare reasonably well with those from detailed three-dimensional finite element analyses as well as available experimental data. However, the main advantage of the proposed methodology is its high computational efficiency as compared with three-dimensional finite element analyses.

Mital, Subodh K.↗

Real-time transmission of digital video using variable-length coding

Huffman coding is a variable-length lossless compression technique where data with a high probability of occurrence is represented with short codewords, while 'not-so-likely' data is assigned longer codewords. Compression is achieved when the high-probability levels occur so frequently that their benefit outweighs any penalty paid when a less likely input occurs. One instance where Huffman coding is extremely effective occurs when data is highly predictable and differential coding can be applied (as with a digital video signal). For that reason, it is desirable to apply this compression technique to digital video transmission; however, special care must be taken in order to implement a communication protocol utilizing Huffman coding. This paper addresses several of the issues relating to the real-time transmission of Huffman-coded digital video over a constant-rate serial channel. Topics discussed include data rate conversion (from variable to a fixed rate), efficient data buffering, channel coding, recovery from communication errors, decoder synchronization, and decoder architectures. A description of the hardware developed to execute Huffman coding and serial transmission is also included. Although this paper focuses on matters relating to Huffman-coded digital video, the techniques discussed can easily be generalized for a variety of applications which require transmission of variable-length data.

Bizon, Thomas P.↗

An improved dataset for predicting mammal infecting viruses from genetic sequence information

There have been several attempts to develop machine learning (ML) models to identify human infecting viruses from their genomic sequences, with varying degrees of success. Direct comparison between models is problematic, because these models are typically trained and evaluated on different datasets with alternative data splitting schemes, features, and model performance metrics. In this paper we present a standardized dataset of mammal infecting and non-infecting viral pathogens, refined from the previous work of Mollentze et al. to include the latest literature evidence, roughly doubling the number of curated host-virus records available to the community, and new host target labels, primate and mammal. The new host labels were included for several reasons, including previous reports that classification performance is better at broader taxonomic ranks and the idea that there may be more data for primate infection that might serve as a suitable proxy for zoonotic potential and avoidance of false positives for human infection due to absence of evidence. On this dataset, we report the performance of eight machine learning models for predicting mammal-infecting viruses from their genomic sequences. We find that randomly assigning cases in our improved dataset to training/testing sets, when compared to the original assignments into training/testing in Mollentze et al., increases the overall average ROC AUC of prediction of human infection from 0.663 ± 0.070 to 0.784 ± 0.013, consistent with the reduction in phylogenetic distance between train and test sets (relative entropy change from 3.00 to 0.08). The broadest host category of mammal infection can be predicted most reliably at 0.850 ± 0.020. We share our improved dataset and code to enable standardized comparisons of machine learning methods to predict human host infections. Overall, we have presented preliminary evidence that classification of virus host infection is more tractable at higher taxonomic ranks, that unsurprisingly reducing the phylogenetic distance between training and test sets can improve predictive performance, that peptide kmer features appear to be harmful to out of sample model performance, and we are left with the question of whether models for virus host prediction can reasonably be expected to perform well in out of sample scenarios given the likelihood that viruses do not share a common ancestor. Consistent with this concern, when the data is resampled such that there is no overlap between viral families in training and test sets (relative entropy > 24), models perform no better than random chance at prediction of human infection regardless of whether kmers are included (ROC AUC 0.50 ± 0.08) or not (ROC AUC 0.50 ± 0.04).

59 BASIC BIOLOGICAL SCIENCES↗

Computations on the massively parallel processor at the Goddard Space Flight Center

Described are four significant algorithms implemented on the massively parallel processor (MPP) at the Goddard Space Flight Center. Two are in the area of image analysis. Of the other two, one is a mathematical simulation experiment and the other deals with the efficient transfer of data between distantly separated processors in the MPP array. The first algorithm presented is the automatic determination of elevations from stereo pairs. The second algorithm solves mathematical logistic equations capable of producing both ordered and chaotic (or random) solutions. This work can potentially lead to the simulation of artificial life processes. The third algorithm is the automatic segmentation of images into reasonable regions based on some similarity criterion, while the fourth is an implementation of a bitonic sort of data which significantly overcomes the nearest neighbor interconnection constraints on the MPP for transferring data between distant processors.

Strong, James P.↗

Streamflow simulation in data-scarce basins using Bayesian and physics-informed machine learning models

Hydrologic predictions at rural watersheds are important but also challenging due to data shortage. Long short-term memory (LSTM) networks are a promising machine learning approach and have demonstrated good performance in streamflow predictions. However, due to its data-hungry nature, most LSTM applications focus on well-monitored catchments with abundant and high-quality observations. In this work, we investigate predictive capabilities of LSTM in poorly monitored watersheds with short observation records. To address three main challenges of LSTM applications in data-scarce locations, i.e., overfitting, uncertainty quantification (UQ), and out-of-distribution prediction, we evaluate different regularization techniques to prevent overfitting, apply a Bayesian LSTM for UQ, and introduce a physics-informed hybrid LSTM to enhance out-of-distribution prediction. Through case studies in two diverse sets of catchments with and without snow influence, we demonstrate that 1) when hydrologic variability in the prediction period is similar to the calibration period, LSTM models can reasonably predict daily streamflow with Nash–Sutcliffe efficiency above 0.8, even with only 2 years of calibration data; 2) when the hydrologic variability in the prediction and calibration periods is dramatically different, LSTM alone does not predict well, but the hybrid model can improve the out-of-distribution prediction with acceptable generalization accuracy; 3) L2 norm penalty and dropout can mitigate overfitting, and Bayesian and hybrid LSTM have no overfitting; and 4) Bayesian LSTM provides useful uncertainty information to improve prediction understanding and credibility. In conclusion, these insights have vital implications for streamflow simulation in watersheds where data quality and availability are a critical issue.

54 ENVIRONMENTAL SCIENCES↗

Expansion-history preferences of DESI DR2 and external data

We explore the origin of the preference of Dark Energy Spectroscopic Instrument (DESI) Data Release 2 (DR2) baryon acoustic oscillation measurements and external data from cosmic microwave background (CMB) and type Ia supernovae (SNIa) that dark energy behavior departs from that expected in the standard cosmological model with vacuum energy (Λ ⁢CDM). In our analysis, we allow a flexible scaling of the expansion rate with redshift that nevertheless allows reasonably tight constraints on the quantities of interest, and adopt and validate a simple yet accurate compression of the CMB data that allows us to constrain our phenomenological model of the expansion history. We find that data consistently show a preference for a 3%–4% increase in the expansion rate at 𝑧 ≃ 0.7 relative to that predicted by the standard Λ⁢ CDM model, in excellent agreement with results from the less flexible (𝑤 0 ,𝑤 𝑎 ) parametrization which was used in previous analyses. Even though our model allows a departure from the best-fit Λ⁢ CDM model at zero redshift, we find no evidence for such a signal. We also find no evidence (at greater than 1⁢𝜎 significance) for a departure of the expansion rate from the Λ ⁢CDM predictions at higher redshifts for any of the data combinations that we consider. Altogether, our results strengthen the robustness of the findings using the combination of DESI, CMB, and SNIa data to dark-energy modeling assumptions.

Cosmological parameters↗