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At least 1,675 records · Page 93

Spatial mapping and profiling of metabolite distributions during germination

Germination is a highly complex process by which seeds begin to develop and establish themselves as viable organisms. In this paper, we utilize a combination of GC-MS, LC-fluorescence, and mass spectrometry imaging (MSI) approaches to profile and visualize the metabolic distributions of germinating seeds from two different inbreds of maize seeds, B73 and Mo17. GC and LC analyses demonstrate that the two inbreds are highly differentiated in their metabolite profiles throughout the course of germination, especially with regard to amino acids, sugar alcohols, and small organic acids. Crude dissection of the seed followed by GC-MS analysis of polar metabolites also revealed that many compounds were highly sequestered among the various seed tissue types. To further localize compounds, matrix-assisted laser desorption/ionization MSI is utilized to visualize compounds in fine detail in their native environments over the course of germination. Most notably, the fatty acyl chain-dependent differential localization of phospholipids and TAGs were observed within the embryo and radicle, showing correlation with the heterogeneous distribution of fatty acids. Furthermore, other interesting observations include unusual localization of ceramides on the endosperm/scutellum boundary, and subcellular localization of ferulate in the aleurone.

59 BASIC BIOLOGICAL SCIENCES↗

In situ temperature profile measurements with high-energy X-rays as a probe of optical floating zone crystal growth environment

The ability of optical floating zone (OFZ) furnaces to rapidly produce large single crystals of complex emerging materials has had a transformative effect on many scientific fields that require samples of this type. However, the crystal growth process within the OFZ furnace is not well understood owing to the challenges involved in monitoring the high-temperature crystal growth process. Novel beamline-compatible optical furnaces that approximate the inhomogeneous growth environment within an OFZ furnace have been fabricated and tested in high-energy synchrotron beamlines. In this paper, it is demonstrated that temperature profiles can be effectively extracted from powder diffraction data collected on polycrystalline ceramic rods heated at their tip. Furthermore, these measured temperature profiles can be accurately reproduced using a heat-transfer model that accounts for solid-state thermal conduction, partial sample lamp power absorption, convective air cooling and radiative cooling, allowing key thermal parameters such as thermal conductivity to be extracted from experimental data.

36 MATERIALS SCIENCE↗

Simulations of radiation damage as a function of the temporal pulse profile in femtosecond X-ray protein crystallography

Serial femtosecond X-ray crystallography of protein nanocrystals using ultrashort and intense pulses from an X-ray free-electron laser has proved to be a successful method for structural determination. However, due to significant variations in diffraction pattern quality from pulse to pulse only a fraction of the collected frames can be used. Experimentally, the X-ray temporal pulse profile is not known and can vary with every shot. This simulation study describes how the pulse shape affects the damage dynamics, which ultimately affects the biological interpretation of electron density. The instantaneously detected signal varies during the pulse exposure due to the pulse properties, as well as the structural and electronic changes in the sample. Here ionization and atomic motion are simulated using a radiation transfer plasma code. Pulses with parameters typical for X-ray free-electron lasers are considered: pulse energies ranging from 10 4 to 10 7 J cm -2 with photon energies from 2 to 12 keV, up to 100 fs long. Radiation damage in the form of sample heating that will lead to a loss of crystalline periodicity and changes in scattering factor due to electronic reconfigurations of ionized atoms are considered here. The simulations show differences in the dynamics of the radiation damage processes for different temporal pulse profiles and intensities, where ionization or atomic motion could be predominant. Overall, the different dynamics influence the recorded diffracted signal in any given resolution and will affect the subsequent structure determination.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Factorization Machine Learning for Disaggregation of Transmission Load Profiles with High Penetration of Behind-the-Meter Solar

The ever-growing high penetration of ubiquitously distributed energy resources, especially behind-the-meter solar (BTM) generations, has significant impacts on nodal load (i.e., net injection) profiles and consequently caused imperative operational challenges to system operators such as regional transmission organizations (RTOs). Illustrated by real-world nodal data and examples at PJM Interconnection, this paper first discusses the application and necessity of effectively extracting daily nodal load profiles in a non-intrusive manner. More importantly, a novel bi-level architecture, including Factorization Machines (FM) learning procedure has been proposed to effectively disaggregate not only one node but every node in an RTO service territory. Specifically, FM leaning is adopted to capture the interconnections between related features to better utilize the correlation between buses in the same region and between a single bus and the zonal load. The proposed bi-level technique is numerically validated using real-world, minute-level, normalized, and anonymized nodal data at PJM service territory.

behind the meter solar, load disaggregation, load ↗

Profiling optimization for big data transfer over dedicated channels

The transfer of big data is increasingly supported by dedicated channels in high-performance networks, where transport protocols play an important role in maximizing applicationlevel throughput and link utilization. The performance of transport protocols largely depend on their control parameter settings, but it is prohibitively time consuming to conduct an exhaustive search in a large parameter space to find the best set of parameter values. We propose FastProf, a stochastic approximation-based transport profiler, to quickly determine the optimal operational zone of a given data transfer protocol/method over dedicated channels. We implement and test the proposed method using both emulations based on real-life performance measurements and experiments over physical connections with short (2 ms) and long (380 ms) delays. Both the emulation and experimental results show that FastProf significantly reduces the profiling overhead while achieving a comparable level of end-to-end throughput performance with the exhaustive search-based approach.

Yun, D.↗

Extracting and Generating PV Soiling Profiles for Analysis, Forecasting, and Cleaning Optimization

The identification and prediction of the daily soiling profiles of a photovoltaic site is essential to plan the optimal cleaning schedule. In this article, we analyze and propose various methods to extract and generate photovoltaic soiling profiles, in order to improve the analysis and the forecast of the losses. New soiling rate extraction methods are proposed to reflect the seasonal variability of the soiling rates and, for this reason, are found to identify the most convenient cleaning day with the highest accuracy for the investigated sites. Also, we present an approach that could be used to predict future soiling losses through the implementation of stochastic weather generation algorithms whose ability to identify in advance the best cleaning schedule is also successfully tested. The methods presented in this article can optimize the operation and maintenance schedule and could make it possible, in the future, to predict soiling losses through analysis based only on environmental parameters, such as rainfall and particulate matter, without the need of long-term soiling data.

14 SOLAR ENERGY↗

Velocity Profiling of Multiphase Flows Using Capacitive Sensor Sensitivity Gradient

Velocity profiling of a flow involves the task of determining the velocity vector at every point in a given flow volume. A new method is proposed for velocity profiling of multiphase flows based on electrical capacitance volume tomography (ECVT) sensors. The proposed method utilizes a mapping between the change in measured capacitances and the displacement of flow that is effected by the spatial gradient of the sensitivity distribution. Here, this novel mapping not only avoids the need for costly image cross-correlations but also is fully compatible with existing ECVT sensor and image reconstruction algorithms. Simulation and measurement results are provided to demonstrate the proposed method.

47 OTHER INSTRUMENTATION↗

A Stochastic Framework for Estimating Load Profiles at EV Fast Charging Stations

This paper formulates a methodology for estimating the average daily load profiles of EV fast charging stations over a planning horizon of five to ten years. The developed methodology uses historic vehicle registration data, state-level EV adoption targets, seasonal driving patterns, local demographics, competition, and traffic volume information to predict average station usage. Through Monte Carlo simulations, an average daily load profile is obtained for each month in the planning horizon, and prediction uncertainty is quantified. The proposed framework will facilitate the accurate estimation of energy and demand costs incurred by the charging station over the planning period, thereby informing return-on-investment calculations.

Biswas, Shuchismita↗

Automatic Attribute Profiles

Morphological attribute profiles are multilevel decompositions of images obtained with a sequence of transformations performed by connected operators. They have been extensively employed in performing multi-scale and region-based analysis in a large number of applications. One main, still unresolved, issue is the selection of filter parameters able to provide representative and non-redundant threshold decomposition of the image. This paper presents a framework for the automatic selection of filter thresholds based on Granulometric Characteristic Functions (GCFs). GCFs describe the way that non-linear morphological filters simplify a scene according to a given measure. Since attribute filters rely on a hierarchical representation of an image (e.g., the Tree of Shapes) for their implementation, GCFs can be efficiently computed by taking advantage of the tree representation. Eventually, the study of the GCFs allows the identification of a meaningful set of thresholds. Therefore, a trial and error approach is not necessary for the threshold selection, automating the process and in turn decreasing the computational time. It is shown that the redundant information is reduced within the resulting profiles (a problem of high occurrence, as regards manual selection). The proposed approach is tested on two real remote sensing data sets, and the classification results are compared with strategies present in the literature.

97 MATHEMATICS AND COMPUTING↗

Influence of Heat Treatments on the Near-Surface Tritium Concentration Profiles

Austenitic stainless steel, type 316, absorbs significant quantities of tritium into the near surface (<1 μm) on exposure to tritium containing gases at room temperature. The tritium concentrations that develop in the near-surface region (<1 μm) are shown to persist for several years without changing. The current work shows the effect of heat treatments on the near-surface tritium-concentration profiles in stainless steel. Identical stainless-steel samples were exposed to tritium at room temperature and then were heated to different temperatures between 100 and 300°C for two hours under a stagnant argon atmosphere. After this initial preheating, the concentration profiles in the first 10 μm were measured by using a combination of a ZnCl2 wash and an etching procedure. Tritium was thermally released by heating the samples to 550°C to measure the residual tritium present in the bulk of the sample. The data show two dominant features. First, preheating causes tritium to migrate both out of the sample and deeper than >1 μm into the bulk. Furthermore, this effect increases with increasing temperature. Second, depletion of tritium from the near surface does not occur until a temperature of 200°C.

36 MATERIALS SCIENCE↗

Thermal Profiling of Residential Energy Use

This work describes a methodology for informing targeted demand-response (DR) and marketing programs that focus on the temperature-sensitive part of residential electricity demand. Our methodology uses data that is becoming readily available at utility companies-hourly energy consumption readings collected from "smart" electricity meters, as well as hourly temperature readings. To decompose individual consumption into a thermal-sensitive part and a base load (non-thermally-sensitive), we propose a model of temperature response that is based on thermal regimes, i.e., unobserved decisions of consumers to use their heating or cooling appliances. We use this model to extract useful benchmarks that compose thermal profiles of individual users, i.e., terse characterizations of the statistics of these users' temperature-sensitive consumption. We present example profiles generated using our model on real consumers, and show its performance on a large sample of residential users. This knowledge may, in turn, inform the DR program by allowing scarce operational and marketing budgets to be spent on the right users-those whose influencing will yield highest energy reductions-at the right time. We show that such segmentation and targeting of users may offer savings exceeding 100% of a random strategy.

Albert, A↗

Semi-Supervised, Non-Intrusive Disaggregation of Nodal Load Profiles With Significant Behind-the-Meter Solar Generation

It is of imperative interests for regional transmission organizations (RTOs) to effectively extract actual load profiles at transmission nodes with significant behind-the-meter solar generation, which remains a gap in the existing technology paradigm. This paper proposes an explicit yet efficient linear estimator to disaggregate actual load profiles at transmission buses with significant behind-the-meter (BTM) solar generations. The proposed estimator is based on disaggregating (i.e., extracting) at locations close to transmission buses under consideration. Further, to overcome the lack of “ground truth” and validate the performance of the proposed algorithms, we first propose semi-supervised mechanisms with parameter tuning as well as unsupervised clustering and leverage the unique characteristics of zero-crossing points in BTM solar peaking behaviors, which we refer to as “Zone-to-Node (Z2N)” methods. Next, we further propose a bi-level Node-to-Node (N2N) framework that improves the overall disaggregation performances compared to Z2N. Numerical results are presented using real-world data at PJM Interconnection.

14 SOLAR ENERGY↗

Optimization of Air-Gap Profile in Interior Permanent-Magnet Synchronous Motors for Torque Ripple Mitigation

Interior permanent magnet synchronous motors (IPMSMs) have been widely used due to their high efficiency and high power density. Minimization of torque pulsation resulting in vibration and acoustic noise is one of the important design considerations for IPMSMs. In this paper, a grid on/off search method for the rotor profile is proposed to mitigate torque pulsation. Selection of the rotor profile is due to the fact that air-gap is the most sensitive parameter in electric machines wherein changes in flux densities can cause substantial differences in the distribution of forces. A layer comprised of 20 partitions with a 0.1 mm thickness and 3 degrees wide grids have been introduced to the rotor surface for each pole and the possible geometries have been analyzed using finite element method (FEM) in ANSYS Maxwell. An optimal design was found that has the lowest torque ripple with a higher average torque compared to the original design. Genetic algorithm (GA) has also been applied to the method to automate the coupling between Maxwell and Matlab thereby saving the simulation time. Finally, complete structural analysis has been done for both of the original and optimal designs to verify the superiority and feasibility of the proposed design.

42 ENGINEERING↗

A Proposal of Conducting Bioequivalence Trials with Gastric pH Modulators for Two Oral Formulations Demonstrating Different Dissolution Profiles at Elevated pH

In this paper, a special case for bioequivalence evaluation of oral formulations is discussed. Drug formulations with different forms of active moieties (e.g., free base and salt) may yield different dissolution characteristics and, thus, differ in absorption at elevated gastric pH . However, routine bioequivalence trials using subjects with normal gastric pH (i.e., ~ 1) may fail to identify these differences because dissolution/absorption profiles of the two formulations at normal gastric pH are similar. In the case of palbociclib, it is confirmedthat the free base and salt formulations showed different absorption in patients with different gastric pH . Significant reduction in drug absorption was observed only in patients with elevated gastric pH using free base formulation. The discovery that the free base had significantly reduced absorption hinged on the inclusion of enough patients with elevated gastric pH to detect a difference in a bioequivalence trial. This raises a concern, as demonstrated through simulation, that dissolution/absorption differences in other formulations could be missed in routine bioequivalence trials. Aside from differences in active pharmaceutical ingredients ( API s), other factors, such as changes in excipients or manufacturing methods, may also lead to exposure differences between formulations at elevated gastric pH . For formulations containing different forms of the same active moiety or the same API and showing different dissolution profiles at elevated pH (i.e., pH ~ 4–6.8), evaluation of bioequivalence with gastric pH modulators (e.g., a H 2 blocker) in addition to routine bioequivalence assessments may help to ensure therapeutic equivalence in patients with elevated gastric pH .

59 BASIC BIOLOGICAL SCIENCES↗

A cell wall reference profile for Miscanthus bioenergy crops highlights compositional and structural variations associated with development and organ origin

Summary Miscanthus spp. are promising lignocellulosic energy crops, but cell wall recalcitrance to deconstruction still hinders their widespread use as bioenergy and biomaterial feedstocks. Identification of cell wall characteristics desirable for biorefining applications is crucial for lignocellulosic biomass improvement. However, the task of scoring biomass quality is often complicated by the lack of a reference for a given feedstock. A multidimensional cell wall analysis was performed to generate a reference profile for leaf and stem biomass from several miscanthus genotypes harvested at three developmentally distinct time points. A comprehensive suite of 155 monoclonal antibodies was used to monitor changes in distribution, structure and extractability of noncellulosic cell wall matrix glycans. Glycan microarrays complemented with immunohistochemistry elucidated the nature of compositional variation, and in situ distribution of carbohydrate epitopes. Key observations demonstrated that there are crucial differences in miscanthus cell wall glycomes, which may impact biomass amenability to deconstruction. For the first time, variations in miscanthus cell wall glycan components were comprehensively characterized across different harvests, organs and genotypes, to generate a representative reference profile for miscanthus cell wall biomass. Ultimately, this portrait of the miscanthus cell wall will help to steer breeding and genetic engineering strategies for the development of superior energy crops.

Plant Sciences↗

Pulsed radio frequency power modulation for profile control in cryogenic reactive ion etching of silicon gratings

Cryogenic silicon etching with SF 6 /O 2 plasmas enables vertical sidewalls and smooth surfaces for high–aspect-ratio structures, yet precise control of etched profiles (sidewall angle, lateral etching, and linewidth retention) remains challenging under continuous-wave excitation due to coupling among radical fluxes, ion energy distributions, and in situ passivation dynamics. In this work, we investigated pulsed radio frequency bias delivery as a process knob for profile control during cryogenic silicon etching. Systematic experiments on 500 nm-wide, 1 μm-pitch gratings etched to 0.8–1.1 μm depth at 0.5–2 kHz pulsing frequency and 25%–75% duty cycle revealed strong dependencies of etch rate, linewidth, and sidewall angle on modulation conditions. We proposed a conceptual kinetic picture combined with feature-scale electrostatic analysis to understand the alternation of ion-driven etching and passivation recovery between on/off segments and local electric field shaping and modulation of ion trajectories within the trench. Moderate duty cycles (50%–75%) near 1 kHz achieved a balance between anisotropy and etch rate. These results demonstrate pulsed-bias modulation can be utilized to tune directionality and sidewall preservation in cryogenic SF 6 /O 2 etching, which are relevant to photonic, metrology, and quantum device fabrication.

36 MATERIALS SCIENCE↗

Implications of the focal beam profile in serial femtosecond crystallography

The photon density profile of an X-ray free-electron laser (XFEL) beam at the focal position is a critical parameter for serial femtosecond crystallography (SFX), but is difficult to measure because of the destructive power of the beam. A novel high intensity radiation induced phasing method (HIRIP) has been proposed as a general experimental approach for protein structure determination, but has proved to be sensitive to variations of the X-ray intensity, with uniform incident fluence desired for best performance. Here we show that experimental SFX data collected at the nano-focus chamber of the Coherent X-ray Imaging end-station at the Linac Coherent Light Source using crystals with a limited size distribution suggests an average profile of the X-ray beam that has a large variation of intensity. We propose a new method to improve the quality of high fluence data for HI-RIP, by identifying and removing diffraction patterns from crystals exposed to the low intensity region of the beam. The method requires crystals of average size comparable to the width of the focal spot.

43 PARTICLE ACCELERATORS↗

Multifunctional light beam source for surface slope measuring long trace profilers

To fully exploit the advantages of fourth-generation synchrotron light sources, diffraction-limited-storage-rings (DLSR) and fully coherent free electron lasers (FELs), beamline mirrors and diffraction grating must be of exceptional quality. To achieve the required mirror and grating quality, the metrology instrumentation and methods used to characterize these challenging optics and, even more so, optical assemblies must also offer exceptional functionality and performance. One of the most widely used slope measuring instruments for characterizing x-ray optics is the long trace profiler (LTP). The easily reconfigurable mechanical design of the LTP allows optimization of the profiler arrangement to the specifics of a particular metrology task. Here, we discuss the optical schematic, design, and performance of an original multifunctional light beam source that provides functional flexibility of the LTP optical sensor. With this source, the LTP can be easily reconfigured for measurements of x-ray mirrors or diffraction gratings that have widely different source coherence requirements. Usage of a source with a low degree of coherence for mirror metrology helps to suppress the LTP systematic errors due to spurious interference effects in the LTP optical elements. A high-coherence narrow-band source is used for groove-density-distribution characterization of x-ray diffraction gratings. The systematic error and spatial resolution of the LTP with the different sources is also measured and analyzed.

Yashchuk, Valeriy V.↗