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Architecture and Design of Molecule Logic Gates and Atom Circuits: Modeling and Simulation of Electron Transport at the Nanoscale: Illustrations in Low-Dimensional Carbon Nanostructures, Chapter 9.

This chapter showcases selected illustrations of various manifestations of nanoscale and molecular electronic effects as investigated by quantum mechanical methods. The examples include results demonstrating (1) how graphitic nanoribbons can be assembled into multiterminal networks and the influence on electron transport; (2) how the position of a single embedded molecule can be modified to change the overall conduction state of a nanowire; (3) how carbon nanotubes can be assembled into complex covalent arrays and how these can be obtained experimentally; (4) how quantum interference can be understood as emerging from the presence of multiple levels of confinements in carbon nanorings; (5) how new functionality emerges at the nanoscale due to the interplay of magnetic, electronic, and structural properties of individual graphitic nanoribbons assembled into wiggle-like structures; and (6) how quantum chemical modeling can lead to the design of electrodes with enhanced interfaces for molecular coupling.

Electronic Molecular State↗

Structural Changes in Self-Catalyzed Adsorption of Carbon Monoxide on 1,4-Phenylene Diisocyanide Modified Au(111)

The self-accelerated adsorption of CO on 1,4-phenylene diisocyanide (PDI)-derived oligomers on Au(111) is explored by reflection–absorption infrared spectroscopy and scanning tunneling microscopy. PDI incorporates gold adatoms from the Au(111) surface to form one-dimensional —(Au–PDI) n — chains that can also connect between gold nanoparticles on mica to form a conductive pathway between them. CO adsorption occurs in two stages; it first adsorbs adjacent to the oligomers that move to optimize CO adsorption. Further CO exposure induces PDI decoordination to form Au–PDI adatom complexes thereby causing the conductivity of a PDI-linked gold nanoparticle array on mica to decrease to act as a chemically drive molecular switch. This simple system enables the adsorption process to be explored in detail. DFT calculations reveal that both the —(Au–PDI) n — oligomer chain and the Au–PDI adatom complex are stabilized by coadsorbed CO. A kinetic “foot-in-the-door” model is proposed in which fluctuations in PDI coordination allow CO to diffuse into the gap between gold adatoms to prevent the PDI from reattaching, thereby allowing additional CO to adsorb, to provide kinetic model for allosteric CO adsorption on PDI-covered gold.

1,4-phenylene diisocyanide (PDI)↗

Tailoring Vacancies Far Beyond Intrinsic Levels Changes the Carrier Type and Optical Response in Monolayer MoSe 2- x Crystals

Defect engineering has been a critical step in controlling the transport characteristics of electronic devices, and the ability to create, tune, and annihilate defects is essential to enable the range of next-generation devices. Whereas defect formation has been well-demonstrated in three-dimensional semiconductors, similar exploration of the heterogeneity in atomically thin two-dimensional semiconductors and the link between their atomic structures, defects, and properties has not yet been extensively studied. In this paper, we demonstrate the growth of MoSe 2–x single crystals with selenium (Se) vacancies far beyond intrinsic levels, up to ~20%, that exhibit a remarkable transition in electrical transport properties from n- to p-type character with increasing Se vacancy concentration. A new defect-activated phonon band at ~250 cm -1 appears, and the A 1g Raman characteristic mode at 240 cm -1 softens toward ~230 cm -1 which serves as a fingerprint of vacancy concentration in the crystals. We show that post-selenization using pulsed laser evaporated Se atoms can repair Se-vacant sites to nearly recover the properties of the pristine crystals. Finally, first-principles calculations reveal the underlying mechanisms for the corresponding vacancy-induced electrical and optical transitions.

36 MATERIALS SCIENCE↗

Visualizing Light-Induced Microstrain and Phase Transition in Lead-Free Perovskites Using Time-Resolved X-Ray Diffraction

Metal halide perovskites have emerged as promising materials for optoelectronic applications in the last decade. A large amount of effort has been made to investigate the interplay between the crystalline lattice and photoexcited charge carriers as it is vital to their optoelectronic performance. Among them, ultrafast laser spectroscopy has been intensively utilized to explore the charge carrier dynamics of perovskites, from which the local structural information can only be extracted indirectly. Here, we have applied a time-resolved X-ray diffraction technique to investigate the structural dynamics of prototypical two-dimensional lead-free halide perovskite Cs 3 Bi 2 Br 9 nanoparticles across temporal scales from 80 ps to microseconds. We observed a quick recoverable (a few ns) photoinduced microstrain up to 0.15% and a long existing lattice expansion (~a few hundred nanoseconds) at mild laser fluence. Once the laser flux exceeds 1.4 mJ/cm 2 , the microstrain saturates and the crystalline phase partially transfers into a disordered phase. This photoinduced transient structural change can recover within the nanosecond time scale. Furthermore, these results indicate that photoexcitation of charge carriers couples with lattice distortion, which fundamentally affects the dielectric environment and charge carrier transport.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Built-in electric field control of magnetic coupling in van der Waals semiconductors

Electrical control of magnetism in a two-dimensional (2D) semiconductor is of great interest for emerging nanoscale low-dissipation spintronic devices. Here, we propose a general approach of tuning magnetic coupling and anisotropy of a van der Waals (vdW) 2D magnetic semiconductor via a built-in electric field generated by the adsorption of superatomic ions. Using first-principles calculations, we predict a significant enhancement of ferromagnetic coupling and a great change of magnetic anisotropy in 2D semiconductors when they are sandwiched between superatomic cations and anions. The magnetic coupling is directly affected by the built-in electric field, which lifts the energy levels of mediated ligands' orbitals and enhances the superexchange interactions. Finally, these findings will be of interest for ionic gating controlled ferromagnets and magnetoelectronics based on vdW 2D semiconductors.

2-dimensional systems↗

Standing Waves Induced by Valley-Mismatched Domains in Ferroelectric SnTe Monolayers

Two-dimensional (2D) quasiparticle standing waves originate from the interference of coherent quantum states and are usually created by the scattering off edges, atomic steps, or adatoms that induce large potential barriers. We report standing waves close to the valence band maximum (E V ), confined by electrically neutral domain walls of newly discovered ferroelectric SnTe monolayers, as revealed by spatially resolved scanning tunneling spectroscopy. Ab initio calculations show that this novel confinement arises from the polarization lifted hole valley degeneracy and a ~90° rotation of the Brillouin zones that render holes’ momentum mismatched across neighboring domains. These results show a potential for polarization-tuned valleytronics in 2D ferroelectrics.

2-dimensional systems↗

SU-E-J-16: A Review of the Magnitude of Patient Imaging Shifts in Relation to Departmental Policy Changes

Purpose: To evaluate how changes in imaging policy affect the magnitude of shifts applied to patients. Methods: In June 2012, the department's imaging policy was altered to require that any shifts derived from imaging throughout the course of treatment shall be considered systematic only after they were validated with two data points that are consistent in the same direction. Multiple additions and clarifications to the imaging policy were implemented throughout the course of the data collection, but they were mostly of administrative nature. Entered shifts were documented in MOSAIQ (Elekta AB) through the localization offset. The MOSAIQ database was queried to identify a possible trend. A total of 25,670 entries were analyzed, including four linear accelerators with a combination of MV planar, kV planar and kV three dimensional imaging. The monthly average of the magnitude of the vector was used. Plan relative offsets were excluded. During the evaluated period of time, one of the satellite facilities acquired and implemented Vision RT (AlignRT Inc). Results: After the new policy was implemented the shifts variance and standard deviation decreased. The decrease is linear with time elapsed. Vision RT implementation at one satellite facility reduced the number of overall shifts, specifically for breast patients. Conclusion: Changes in imaging policy have a significant effect on the magnitude of shifts applied to patients. Using two statistical points before applying a shift as persistent decreased the overall magnitude of the shifts applied to patients.

60 APPLIED LIFE SCIENCES↗

Impacts of climate change on future hurricane induced rainfall and flooding in a coastal watershed: A case study on Hurricane Harvey

The warming climate is likely to increase hurricane-associated extreme rainfall and lead to sea-level rise (SLR). Thus, how the floods induced by intense hurricanes respond to these potential changes is of great concern. This study investigates the future warmer climate impacts on hurricane-induced extreme rainfall, and—more importantly—the subsequent compound flooding at the watershed scale (from an event-based analysis perspective). To this goal, a modeling framework is designed based on the Distributed Hydrology Soil Vegetation Model (DHSVM), the Two-Dimensional fvand the Regional Community Earth System Model (R-CESM). The framework was applied to Hurricane Harvey (2017) at the Clear Creek watershed (a coastal watershed in the southern Houston) as a case study. The results show that the projected maximum rainfall totals over the watershed would be exacerbated by 17.7 % and 49.7 % in the 2050s and 2090s (respectively) under Representative Concentration Pathway 8.5 (RCP 8.5). This means a 16.1 % increase in Harvey rainfall over the watershed per degree Celsius increase in Mean Surface Temperature over the Gulf of Mexico region (18°~31° N, 77°~98° W). Meanwhile, the increases in maximum inundation extent would be 11.0 % (2050s) and 19.5 % (2090s). Furthermore, considerable increases in maximum inundation depth and duration in regions along the middle and downstream of Clear Creek (and also those around Clear Lake) are expected. The projected SLR will have little effect on the maximum inundation depth and extent if storm surge changes are not taken into account; meanwhile, it will influence the inundation duration at downstream locations. In conclusion, this modeling framework can be also applied at other coastal watersheds to evaluate the projected climate change impacts on the compound flooding induced by extreme climate events.

54 ENVIRONMENTAL SCIENCES↗

A novel bacterial protein family that catalyses nitrous oxide reduction

Nitrous oxide (N 2 O), a driver of global warming and climate change, has reached unprecedented concentrations in Earth’s atmosphere. Current N 2 O sources outpace N 2 O sinks, emphasizing the need for comprehensive understanding of processes that consume N 2 O. Microbes that express the enzyme N 2 O reductase (N 2 OR) convert N 2 O to climate change-neutral dinitrogen (N 2 ). Known N 2 ORs belong to the canonical clade I and clade II NosZ reductases and are considered key enzymes for N 2 O reduction. Here we report a previously unrecognized protein family with a role in N 2 O reduction, clade III lactonase-type N 2 OR (L-N 2 OR), which diverges in sequence from canonical NosZ but conserves three-dimensional protein structural features. Integrated physiological, metagenomic, proteomic and structural modelling studies demonstrate that L-N 2 ORs catalyse N 2 O reduction. L-N 2 OR genes occur in several phyla, predominantly in uncultured taxa with broad geographic distribution. Our findings expand the known diversity of N 2 ORs and implicate previously unrecognized taxa (for example, Nitrospinota) in N 2 O consumption. In conclusion, the expansion of N 2 OR diversity and the identification of a novel type of catalyst for N 2 O reduction advances the understanding of N 2 O sinks, has implications for greenhouse gas emission and climate change modelling, and expands opportunities for innovative biotechnologies aimed at curbing N 2 O emissions.

He, Guang 何广 [Univ. of Tennessee, Knoxville, TN (U↗

The Impact of Parameterized Lateral Mixing on the Antarctic Circumpolar Current in a Coupled Climate Model

This study examines the impact of changing the lateral diffusion coefficient ARedi on the transport of the Antarctic Circumpolar Current (ACC). The lateral diffusion coefficient ARedi is poorly constrained, with values ranging across an order of magnitude in climate models. The ACC is difficult to accurately simulate, and there is a large spread in eastward transport in the Southern Ocean (SO) in these models. This paper examines how much of that spread can be attributed to different eddy parameterization coefficients. A coarse-resolution, fully coupled model suite was run with A Redi = 400, 800, 1200, and 2400 m 2 s -1 . Additionally, two simulations were run with two-dimensional representations of the mixing coefficient based on satellite altimetry. Relative to the 400 m 2 s -1 case, the 2400 m 2 s -1 case exhibits 1) an 11% decrease in average wind stress from 50° to 65°S, 2) a 20% decrease in zonally averaged eastward transport in the SO, and 3) a 14% weaker transport through the Drake Passage. The decrease in transport is well explained by changes in the thermal current shear, largely due to increases in ocean density occurring on the northern side of the ACC. In intermediate waters these increases are associated with changes in the formation of intermediate waters in the North Pacific. We hypothesize that the deep increases are associated with changes in the wind stress curl allowing Antarctic Bottom Water to escape and flow northward.

54 ENVIRONMENTAL SCIENCES↗

Thermal drawdown and late‐stage seismic‐slip fault reactivation in enhanced geothermal reservoirs

Abstract Late‐stage seismic slip in geothermal reservoirs has been shown as a potential mechanism for inducing seismic events of magnitudes to ~2.6 as late as two decades into production. We investigate the propagation of fluid pressures and thermal stresses in a prototypical geothermal reservoir containing a centrally located critically stressed fault from a doublet injector and withdrawal well to define the likelihood, timing, and magnitude of events triggered by both fluid pressures and thermal stresses. We define two bounding modes of fluid production from the reservoir. For injection at a given temperature, these bounding modes relate to either low‐ or high‐relative flow rates. At low relative dimensionless flow rates the pressure pulse travels slowly, the pressure‐driven changes in effective stress are muted, but thermal drawdown propagates through the reservoir as a distinct front. This results in the lowest likelihood of pressure‐triggered events but the largest likelihood of late‐stage thermally triggered events. Conversely, at high relative non‐dimensional flow rates the propagating pressure pulse is larger and migrates more quickly through the reservoir but the thermal drawdown is uniform across the reservoir and without the presence of a distinct thermal front, and less capable of triggering late‐stage seismicity. We evaluate the uniformity of thermal drawdown as a function of a dimensionless flow rate Q D that scales with fracture spacing s ( m ), injection rate q ( kg/s ), and the distance between the injector and the target point L ∗ ( Q D ∝ qs 2 / L ∗ ). This parameter enables the reservoir characteristics to be connected with the thermal drawdown response around the fault and from that the corresponding magnitude and timing of seismicity to be determined. These results illustrate that the dimensionless temperature gradient adjacent to the fault dT D / dx D is exclusively controlled by the factor Q D . More significantly, this temperature gradient correlates directly with both the likelihood and severity of triggered events, enabling the direct scaling of likely magnitudes and timing to be determined a priori and directly related to the characteristics of the reservoir. This dimensionless scaling facilitates design for an optimum Q D value to yield both significant heat recovery and longevity of geothermal reservoirs while minimizing associated induced seismicity.

Gan, Quan↗

Electronic structure and charge-density wave transition in monolayer $\mathrm{VS}_2$

Vanadium disulfide (VS 2 ) attracts elevated interests for its charge-density wave (CDW) phase transition, ferromagnetism, and catalytic reactivity, but the electronic structure of monolayer has not been well understood yet. Here we report synthesis of epitaxial 1T VS 2 monolayer on bilayer graphene grown by molecular-beam epitaxy (MBE). Angle-resolved photoemission spectroscopy (ARPES) measurements reveal that Fermi surface with six elliptical pockets centered at the M points shows gap opening at low temperature. Temperature-dependence of the gap size suggests existence of CDW phase transition above room temperature. Here, our observations provide important evidence to understand the strongly correlated electron physics and the related surface catalytic properties in two-dimensional transition-metal dichalcogenides (TMDCs).

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Electronic and magnetic studies of {kappa}-(BEDT-TTF){sub 2}Hg(SCN){sub 2}Cl.

DC resistivity and electron spin resonance (ESR) measurements have been performed on the two-dimensional organic conductor {kappa}-(BEDT-TTF){sub 2}Hg(SCN){sub 2}Cl. Due to electronic correlations, the compound undergoes a transition from a metallic to an insulating state at T{sub MI} = 34 K. The ESR parameters exhibit a drastic change below T{sub afm} = 27 K that evidences a magnetic phase transition. In this low-temperature state, we observe the characteristics of antiferromagnetic resonances in the angular dependence of the g-value.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Enhanced geometric capabilities for the transient analysis code T-ReX and its application to simulating TREAT experiments

Here, advances in computational architecture have prompted a resurgence in the simulation of reactor transients from first principles. Most codes are unable to simulate transient events with complex models, and require numerous approximations. The code T-ReX (Transient-Reactor eXperiment simulator), an extensive update to TDKENO, has been developed as a transient analysis tool with few geometric limitations and minimal theoretical approximations. T-ReX achieves this by employing the Improved Quasi-Static (IQS) method to solve the time dependent Boltzmann transport equation with explicit representation of delayed neutrons. The primary change in T-ReX relative to TDKENO is the incorporation of a modified version of the Monte Carlo code KENO-VI to calculate the flux shape and model the geometry of a problem. Using KENO-VI to model systems allows exact representation of the geometry. The changes to T-ReX are verified by comparison of solutions to computational benchmark problems found with a previous version of TDKENO that made use of KENO V.a, and several other codes with time-dependent capabilities. In addition, a three-dimensional model of the Transient Reactor Test Facility (TREAT) core at the Idaho National Laboratory (INL) is constructed with KENO-VI, and used to validate T ReX. T-ReX produces results that agree with benchmark problems, and are in better agreement with TREAT experimental data than TDKENO.

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

Nanoelectronics with proximitized materials

While materials design for many device applications usually relies on adding impurities, recent advances in scaling-down heterostructures with improved interfacial properties offer a different way to transform a large class of materials. A given material can be drastically changed by inheriting properties leaking from its neighboring regions, such as magnetism, superconductivity, or spin-orbit coupling. While these proximity effects often have a short range and are considered negligible, the situation is qualitatively different in atomically thin and two-dimensional materials where the extent of proximity effects can exceed their thickness. Consequently, proximitized materials have a potential to display novel properties and device opportunities, absent in any of the constituent region of the considered heterostructures. Such proximitized materials could provide platforms for a wide range of emerging applications: from seamless integration of memory and logic, to fault-tolerant topologically protected quantum computing.

36 MATERIALS SCIENCE↗

Liver proteomics in progressive alcoholic steatosis

Fatty liver is an early stage of alcoholic and nonalcoholic liver disease (ALD and NALD) that progresses to steatohepatitis and other irreversible conditions. In this study, we identified proteins that were differentially expressed in the livers of rats fed 5% ethanol in a Lieber–DeCarli diet daily for 1 and 3 months by discovery proteomics (two-dimensional gel electrophoresis and mass spectrometry) and non-parametric modeling (Multivariate Adaptive Regression Splines). Hepatic fatty infiltration was significantly higher in ethanol-fed animals as compared to controls, and more pronounced at 3 months of ethanol feeding. Discovery proteomics identified changes in the expression of proteins involved in alcohol, lipid, and amino acid metabolism after ethanol feeding. At 1 and 3 months, 12 and 15 different proteins were differentially expressed. Of the identified proteins, down regulation of alcohol dehydrogenase (− 1.6) at 1 month and up regulation of aldehyde dehydrogenase (2.1) at 3 months could be a protective/adaptive mechanism against ethanol toxicity. In addition, betaine-homocysteine S-methyltransferase 2 a protein responsible for methionine metabolism and previously implicated in fatty liver development was significantly up regulated (1.4) at ethanol-induced fatty liver stage (1 month) while peroxiredoxin-1 was down regulated (− 1.5) at late fatty liver stage (3 months). Nonparametric analysis of the protein spots yielded fewer proteins and narrowed the list of possible markers and identified D-dopachrome tautomerase (− 1.7, at 3 months) as a possible marker for ethanol-induced early steatohepatitis. The observed differential regulation of proteins have potential to serve as biomarker signature for the detection of steatosis and its progression to steatohepatitis once validated in plasma/serum. -- Graphical abstract: The figure shows the Hierarchial cluster analysis of differentially expressed protein spots obtained after ethanol feeding for 1 (1–3) and 3 (4–6) months. C and E represent pair-fed control and ethanol-fed rats, respectively. Highlights: ► Proteins related to ethanol-induced steatosis and mild steatohepatitis are identified. ► ADH1C and ALDH2 involved in alcohol metabolism are differentially expressed at 1 and 3 months. ► Discovery proteomics identified a group of proteins to serve as potential biomarkers. ► Using nonparametric analysis DDT is identified as a possible marker for liver damage.

60 APPLIED LIFE SCIENCES↗

Time-Resolved Observation of Hole Tunneling in van der Waals Multilayer Heterostructures

We reported a time-resolved study of quantum-mechanical tunneling of holes between two MoSe 2 monolayers that are separated by a monolayer WS 2 energy barrier. Four-layer heterostructures of MoSe 2 /WS 2 /MoSe 2 /graphene, as well as control samples, were fabricated by mechanical exfoliation and dry transfer techniques. To time-resolve the hole tunneling process, an ultrashort laser pulse was used to excite electrons and holes in both MoSe 2 layers. Here, by utilization of the graphene layer to eliminate carriers in the third MoSe 2 layer, the first MoSe 2 layer is selectively populated with the holes, which then tunnel to the third MoSe 2 layer. By monitoring decay of the hole population with an ultrashort probe pulse, we measure a hole tunneling time of about 20 ps, which is found to slightly increase with the injected carrier density. Besides the fundamental interests of real-time observation of the quantum-mechanical tunneling effect across a nanometer barrier, these results provide quantitative understanding on tunneling mechanisms of charge transfer in van der Waals heterostructures, which is useful for designing sophisticated van der Waals multilayer heterostructures.

36 MATERIALS SCIENCE↗

Prospects of Nanoscience with Nanocrystals: 2025 Edition

Abstract Nanocrystals (NCs) of various compositions have made important contributions to science and technology, with their impact recognized by the 2023 Nobel Prize in Chemistry for the discovery and synthesis of semiconductor quantum dots (QDs). Over four decades of research into NCs has led to numerous advancements in diverse fields, such as optoelectronics, catalysis, energy, medicine, and recently, quantum information and computing. The last 10 years since the predecessor perspective “Prospect of Nanoscience with Nanocrystals” was published in ACS Nano have seen NC research continuously evolve, yielding critical advances in fundamental understanding and practical applications. Mechanistic insights into NC formation have translated into precision control over NC size, shape, and composition. Emerging synthesis techniques have broadened the landscape of compounds obtainable in colloidal NC form. Sophistication in surface chemistry, jointly bolstered by theoretical models and experimental findings, has facilitated refined control over NC properties and represents a trusted gateway to enhanced NC stability and processability. The assembly of NCs into superlattices, along with two-dimensional (2D) photolithography and three-dimensional (3D) printing, has expanded their utility in creating materials with tailored properties. Applications of NCs are also flourishing, consolidating progress in fields targeted early on, such as optoelectronics and catalysis, and extending into areas ranging from quantum technology to phase-change memories. In this perspective, we review the extensive progress in research on NCs over the past decade and highlight key areas where future research may bring further breakthroughs.

Chemistry↗