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At least 1,675 records · Page 93

From Structure to Functions: Metagenomics-Enabled Predictive Understanding of Soil Microbial Feedbacks to Climate Change

Understanding the responses, adaptations and feedback mechanisms of biological communities to climate change is critical to project future states of earth and climate systems. Although a significant amount of knowledge is available on the feedbacks of aboveground communities to climate change, the responses of belowground microbial communities are still poorly understood. This is due to challenges in analyzing soil microbial communities in terms of their diversity, structure and function. Thus, the ultimate goal of this study is to advance system-level predictive understanding of the feedbacks of belowground microbial communities to multiple climate change factors and their impacts on soil carbon (C) cycling processes. For this, cutting-edge integrated metagenomic technologies are employed to establish mechanistic linkages among aboveground plant communities, belowground microbial communities, ecosystem processes and functions and climate change. Towards this goal, the following four specific objectives are pursued: (i) To determine the responses of microbial community structure, functions and activities to climate warming, altered precipitation, soil moisture regime and/or clipping in the tundra and temperate grassland ecosystems; (ii) To determine the temperature sensitivity and the effect of substrate priming on recalcitrant C decomposition; (iii) To determine microbiological bases underlying temperature sensitivity of recalcitrant C decomposition; and (iv) To develop integrated bioinformatics and modeling approaches to scale information across different organizational levels towards predictive understanding of ecosystem responses to multiple climate change factors in collaboration with the Knowledge Base (KBase) and integrated into their database. Warming experiments in an Alaskan tundra permafrost soil (AK) as well as an Oklahoma temperate grassland soil (OK) provide a more complete picture of the effects of warming on belowground microbial communities of different (key) soil ecosystems. Numerous research activities have been carried out by the institutions under the support of this program. For brevity, a few key results and their significance are highlighted in this report.

54 ENVIRONMENTAL SCIENCES↗

Root Influences on Mobilization and Export of Mineral-bound Soil Organic Matter

Biogeochemical cycles within mountainous watersheds are key regulators of ecosystem carbon storage and downstream nutrient loadings, and they have shown to be particularly vulnerable to climate change impacts. Increasing temperature and persistent droughts have already dramatically changed vegetation cover across the mountainous western US, with unknown consequences for soil carbon and nutrient cycles belowground. What remains elusive is to what extent associated changes in root-soil interactions may mobilize the vast pool of organic matter (OM) that has been stabilized by associations with minerals for centuries or millennia. Although plant root-driven OM mobilization from minerals may be a central control on carbon loss and nutrient export, such mechanisms are currently missing from conceptual and numerical models. The overall objective of this Exploratory Project is to identify the biogeochemical mechanisms by which roots destabilize mineral-associated organic matter (MAOM) and the cumulative impact on carbon and nutrient fate. To accomplish this goal, we integrated well-controlled laboratory experiments with in-field measurements and a scalable modeling approach. First, we conducted model system experiments to assess the vulnerability of MAOM to exudate-mediated mechanisms. Our results show that common root exudates effectively destabilize MAOM not only through direct, ligand-driven mobilization mechanisms, but also indirect, microbially-mediated mechanisms relying on secondary metabolites and enzymes. We further found that OM bound to poorly crystalline Fe and Al (hydr)oxides is more vulnerable to exudate-induced destabilization than OM bound to more crystalline phases, particularly in response to direct, ligand-promoted mechanisms. These findings demonstrate that the stability of MAOM is not just a function of their inherent properties, but also will depend in large parts on the ability of plant roots and microbes to produce exudates capable of triggering suitable mobilization mechanisms. We further employed a well-controlled rhizobox approach, combining advanced microsensor and mass spectrometry techniques, to resolve spatiotemporal variations in the composition and availability of exudates along single growing roots of grasses. Our results show that the composition of functionally relevant exudate compounds varies at extremely short time scales, seemingly shifting from ligands such as aromatic acids around root tips to less reactive metabolites such as amino acids around mature root segments. These results suggest a prevalence of direct MAOM mobilization mechanisms around the root tip, while indirect MAOM mobilization strategies may dominate around more mature root segments. Additionally, we utilized microsensor measurements in rhizoboxes to parameterize a rhizosphere (hydro)biogeochemistry reactive transport model (eSTOMP-ROOTS). The resulting model was used to assess how root exudations affects the stability of MAOM. Model simulations show that diel pulses of root exudation are strong enough to cause oscillations in biogeochemical conditions—particularly in pH, oxygen concentrations, and microbial activity— that repeatedly disrupt MAOM. Finally, we assessed field-scale impacts of root-driven MAOM destabilization over short and long time scales. A combination of in-field incubations and field-based characterizations showed that MAOM may not only be vulnerable to seasonal variations in root activity, but also to root-driven weathering over pedogenic time scales. In sum, results from our Exploratory Award highlight the strong control plant roots exert on MAOM mobilization and, thus, on the potential for carbon and nutrient export from watersheds.

54 ENVIRONMENTAL SCIENCES↗

Integrated Geomechanics and Geophysics in Induced Seismicity: Mechanisms and Monitoring

Quantifying in-situ subsurface stresses and predicting fracture development are critical to reducing risks of induced seismicity and improving modern energy activities in the subsurface. In this work, we developed a novel integration of controlled mechanical failure experiments coupled with microCT imaging, acoustic sensing, modeling of fracture initiation and propagation, and machine learning for event detections and waveform characterization. Through additive manufacturing (3D printing), we were able to produce bassanite-gypsum rock samples with repeatable physical, geochemical and structural properties. With these "geoarchitected" rock, we provided the role of mineral texture orientation on fracture surface roughness. The impact of poroelastic coupling on induced seismicity has been systematically investigated to improve mechanistic understanding of post shut-in surge of induced seismicity. This research will set the groundwork for characterizing seismic waveforms by using multiphysics and machine learning approaches and improve the detection of low-magnitude seismic events leading to the discovery of hidden fault/fracture systems.

42 ENGINEERING↗

U.S. Industry Opportunities for Advanced Nuclear Technology Development Phase II (Final Report)

This limited scope study aims at preserving the results of experimental programs for the safety of light water cooled and advanced reactors by locating and documenting, to the extent possible, where the experimental test information for these programs has been archived. The Light Water Reactor Data Preservation Activity Team initially identified seven (7) experimental programs, exceeding the required five (5) in the scope of work, which were determined to be “at risk” of potentially losing valuable data. The seven (7) experimental programs/subject areas identified are (descriptions of each experiment/experience are provided in Section 3.0): 1. FERMI-1 Reactor Accident 2. Fission Product Behavior During the In-Pile Severe Fuel Damage Test SFD I-4 3. Containment Iodine Computer Code Exercise Based on Radioiodine Test Facility (RTF) Experiment 4. Wide Range Piping Integrity Demonstration (WIND) Project 5. Iodine Chemical Research in Canada 6. High Temperature Fission Product Chemistry and Transport in Steam 7. Anything related to radioactive Methyl Iodide.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

LDRD 2022 Annual Report: Laboratory Directed Research and Development Program Activities

Each year, Brookhaven National Laboratory (BNL) is required to provide a report of its completed Laboratory Directed Research and Development Program (LDRD) projects to the Department of Energy (DOE) Office of Scientific and Technical Information in accordance with DOE Order 413.2C Chg1 (MinChg) dated August 2, 2018. This report provides a detailed look at the scientific and technical activities for each of the LDRD projects funded by BNL in FY 2022, in fulfillment of that requirement. In FY 2022, the BNL LDRD Program funded 70 projects, 30 of which were new starts, at a total cost of $17.2M. The investments that BNL makes in its LDRD program support the Laboratory’s strategic goals. BNL has identified seven scientific initiatives that define the Laboratory’s scientific future and that will enable it to realize its overall vision. This requires simultaneous excellence in all aspects of BNL’s work – from science and operations, to external partnerships with the local, state, and national communities, and beyond. This is enabled by safe, efficient, and secure operations; by an unwavering commitment to a diverse, equitable, and inclusive environment, including workforce development, both with staff and reaching out to the community; and by a strong focus on renewed infrastructure. The seven scientific initiatives are: 1) Nuclear Physics: uncover the structure of visible matter by constructing and operating the Electron-Ion Collider at BNL to maintain international leadership in nuclear physics for decades; 2) Clean Energy and Climate: support a net-zero U.S. economy through fundamental research in basic energy and climate sciences to revolutionize grid-scale storage, renewable integration, and the study of atmospheric processes with a new facility to improve climate predictability; 3) Quantum Information Science and Technology: discover new quantum materials to enhance quantum computers and develop an entanglement sharing quantum network as a prototype for the first quantum internet; 4) Discovery Science Driven by the Human-AI Facility Integration: revolutionize the operation of experiments across the sciences at user facilities and in core programs; 5) High Energy Physics: understand the origin of space and time with the ATLAS high luminosity upgrade at CERN and the future Long Baseline Neutrino Facility/Deep Underground Neutrino Experiment; 6) Isotope Production: accelerate and expand isotope production to ensure the security of the Nation’s supply; 7) Accelerator Science and Technology: harness the cross-cutting accelerator science expertise at BNL to develop new facilities, improve and expand its user facilities, and promote the use of accelerators in industry. The funded projects support BNL’s seven scientific initiatives and priority programs as well as new areas of research and competencies at the Laboratory that are consistent with the Laboratory’s vision and mission. In total, these LDRD investments supported 43 postdoctoral researchers in whole or in part and resulted in 138 publications and 7 awards. This Program Activities Report represents the future of BNL science; it is an impressive body of exploratory work that investigates many scientific and technical directions in support of the DOE and BNL missions.

99 GENERAL AND MISCELLANEOUS↗

ESnet Requirements Review Program Through the IRI Lens: A Meta-Analysis of Workflow Patterns Across DOE Office of Science Programs (Final Report)

The Department of Energy (DOE) ensures America’s security and prosperity by addressing its energy, environmental, and nuclear challenges through transformative science and technology solutions. The DOE’s Office of Science (SC) delivers groundbreaking scientific discoveries and major scientific tools that transform our understanding of nature and advance the energy, economic, and national security of the United States. The SC’s programs advance DOE mission science across a wide range of disciplines and have developed the research infrastructure needed to remain at the forefront of scientific discovery. The DOE SC’s world-class research infrastructure — exemplified by the 28 SC scientific user facilities — provides the research community with premier observational, experimental, computational, and network capabilities. Each user facility is designed to provide unique capabilities to advance core DOE mission science for its sponsor SC program and to stimulate a rich discovery and innovation ecosystem. Research communities gather and flourish around each user facility, bringing together diverse perspectives. A hallmark of many facilities is the large population of students, postdoctoral researchers, and early-career scientists who contribute as full-fledged users. These facility staff and users collaborate over years to devise new approaches to utilizing the user facility’s core capabilities. The history of the SC user facilities has many examples of wildly inventive researchers challenging operational orthodoxy to pioneer new vistas of discovery; for example, the use of the synchrotron X-ray light sources for study of proteins and other large biological molecules. This continual reinvention of the practice of science — as users and staff forge novel approaches expressed in research workflows — unlocks new discoveries and propels scientific progress. Within this research ecosystem, the high-performance computing (HPC) and networking user facilities stewarded by SC’s Advanced Scientific Computing Research (ASCR) program play a dynamic cross-cutting role, enabling complex workflows demanding high performance data, networking, and computing solutions. The DOE SC’s three HPC user facilities and the Energy Sciences Network (ESnet) high-performance research network serve all of the SC’s programs as well as the global research community. Argonne Leadership Computing Facility (ALCF), the National Energy Research Scientific Computing Center (NERSC), and Oak Ridge Leadership Computing Facility (OLCF) conceive, build, and provide access to a range of supercomputing, advanced computing, and large-scale data-infrastructure platforms, while ESnet interconnects DOE SC research infrastructure and enables seamless exchange of scientific data. All four facilities operate testbeds to expand the frontiers of computing and networking research. Together, the ASCR facilities enterprise seeks to understand and meet the needs and requirements across SC and DOE domain science programs and priority efforts, highlighted by the formal requirements reviews (RRs) methodology. In recent years, the research communities around the SC user facilities have begun experimenting with and demanding solutions integrated with HPC and data infrastructure. This rise of integrated-science approaches is documented in many community and high-level government reports. At the dawn of the era of exascale science and the acceleration of artificial intelligence (AI) innovation, there is a broad need for integrated computational, data, and networking solutions. In response to these drivers, DOE has developed a vision for an Integrated Research Infrastructure (IRI): To empower researchers to meld DOE’s world-class research tools, infrastructure, and user facilities seamlessly and securely in novel ways to radically accelerate discovery and innovation.

42 ENGINEERING↗

NIOLD Run 4 Report

In this report we discuss the motivation, methods, and analysis of the IOTA Run 4 studies of the Nonlinear Integrable Optics, Landau Damping (NIOLD) experiment. We introduce Landau Damping, an effect that damps collective instabilities in particle accelerators. We also introduce and discuss a new method to measure stability diagrams which quantify the strength of Landau Damping, that employs an antidamper. We also present the data collection process, the data analysis procedure, and the preliminary results. The first results qualitatively agree with the analytical predictions and the simulations. Next steps for the current data and goals for future data are also discussed.

43 PARTICLE ACCELERATORS↗

Nanoconfined Interfaces for Highly Selective Separation of Critical Rare Earth Elements

Industrial demand for rare earth elements (REEs) has surged over the past three decades due to their unique properties that support sustainable energy and new technologies. Separating individual REEs is challenging and hazardous, typically done through liquid-liquid extraction. There is an urgent need for environmentally friendly and efficient separation technologies for REEs. Porous materials offer promising advances for sustainable REE separation via ion-selective capture. We hypothesize that REE separation can be efficiently achieved in reactive nanopores, such as Zr(IV) and Cr(III) metal-organic frameworks (MOFs), through surface functionalization. By integrating material synthesis, interfacial chemistry experiments, theory, computation, and machine learning, we gained insights into the chemical factors controlling REE speciation and their competitive adsorption on MOFs. Our findings show that these materials’ selectivity can be tuned by surface functionalization. The machine learning component addressed ion-specific diffusion based on MOF topology and chemistry.

36 MATERIALS SCIENCE↗

HETDEX Public Source Catalog 1: 220 K Sources Including Over 50 K Ly$α$ Emitters from an Untargeted Wide-area Spectroscopic Survey*

We present the first publicly released catalog of sources obtained from the Hobby-Eberly Telescope Dark Energy Experiment (HETDEX). HETDEX is an integral field spectroscopic survey designed to measure the Hubble expansion parameter and angular diameter distance at 1.88 < z < 3.52 by using the spatial distribution of more than a million Lyα-emitting galaxies over a total target area of 540 deg 2 . The catalog comes from contiguous fiber spectra coverage of 25 deg 2 of sky from 2017 January through 2020 June, where object detection is performed through two complementary detection methods: one designed to search for line emission and the other a search for continuum emission. The HETDEX public release catalog is dominated by emission-line galaxies and includes 51,863 Ly$α$-emitting galaxy (LAE) identifications and 123,891 [O ii]-emitting galaxies at z < 0.5. Also included in the catalog are 37,916 stars, 5274 low-redshift (z < 0.5) galaxies without emission lines, and 4976 active galactic nuclei. The catalog provides sky coordinates, redshifts, line identifications, classification information, line fluxes, [O ii] and Ly$α$ line luminosities where applicable, and spectra for all identified sources processed by the HETDEX detection pipeline. Extensive testing demonstrates that HETDEX redshifts agree to within Δz < 0.02, 96.1% of the time to those in external spectroscopic catalogs. We measure the photometric counterpart fraction in deep ancillary Hyper Suprime-Cam imaging and find that only 55.5% of the LAE sample has an r-band continuum counterpart down to a limiting magnitude of r ~ 26.2 mag (AB) indicating that an LAE search of similar sensitivity to HETDEX with photometric preselection would miss nearly half of the HETDEX LAE catalog sample. Data access and details about the catalog can be found online at http://hetdex.org/. A copy of the catalogs presented in this work (Version 3.2) is available to download at Zenodo doi:10.5281/zenodo.7448504.

79 ASTRONOMY AND ASTROPHYSICS↗

Radiative heating rate profiles over the southeast Atlantic Ocean during the 2016 and 2017 biomass burning seasons

Marine boundary layer clouds, including the transition from stratocumulus to cumulus, are poorly represented in numerical weather prediction and general circulation models. Further uncertainties in the cloud structure arise in the presence of biomass burning carbonaceous aerosol, as is the case over the southeast Atlantic Ocean, where biomass burning aerosol is transported from the African continent. As the aerosol plume progresses across the southeast Atlantic Ocean, radiative heating within the aerosol layer has the potential to alter the thermodynamic environment and therefore the cloud structure; however, limited work has been done to quantify this along the trajectory of the aerosol plume in the region. The deployment of the first Atmospheric Radiation Measurement (ARM) Mobile Facility (AMF1) in support of the Layered Atlantic Smoke Interactions with Clouds field campaign provided a unique opportunity to collect observations of cloud and aerosol properties during two consecutive biomass burning seasons during July through October of 2016 and 2017 over Ascension Island (7.96° S, 14.35° W). Using observed profiles of temperature, humidity, and clouds from the field campaign alongside aerosol optical properties from Modern-Era Retrospective analysis for Research and Applications, Version 2 (MERRA-2), as input for the Rapid Radiation Transfer Model (RRTM), profiles of the radiative heating rate due to aerosols and clouds were computed. Radiative heating is also assessed across the southeast Atlantic Ocean using an ensemble of back trajectories from the Hybrid Single Particle Lagrangian Integrated Trajectory (HYSPLIT) model. Idealized experiments using the RRTM with and without aerosols and a range of values for the single-scattering albedo (SSA) demonstrate that shortwave (SW) heating within the aerosol layer above Ascension Island can locally range between 2 and 8 K d -1 depending on the aerosol optical properties, though impacts of the aerosol can be felt elsewhere in the atmospheric column. When considered under clear conditions, the aerosol has a cooling effect at the TOA, and based on the observed cloud properties at Ascension Island, the cloud albedo is not large enough to overcome this. Shortwave radiative heating due to biomass burning aerosol is not balanced by additional longwave (LW) cooling, and the net radiative impact results in a stabilization of the lower troposphere. However, these results are extremely sensitive to the single-scattering albedo assumptions in models.

54 ENVIRONMENTAL SCIENCES↗

Space Processing Applications - The new challenge

The impact of Skylab Space Processing Applications experiments upon ground based research laboratory capabilities is discussed. The findings of a few selected space processing Skylab experiments are summarized and explained. The objectives of the ASTP space processing experiments are summarized. NASA's plans for use of sounding rockets for space processing experiments are outlined briefly. The integration of NASA's Space Processing Program into an active planning effort for use of Shuttle is reviewed.

Montgomery, B. O.↗

Experiment definition phase shuttle laboratory LDRL-10.6 experiment

This report for the Experiment Definition Phase of the Shuttle Laboratory LDRL 10.6 Micrometer Experiment covers period 27 June through 26 September 1975. Activities during the fifth quarter included: (1) reevaluation of system obscuration ratio with a subsequent reduction of this ratio from 0.417 to 0.362, (2) completion of detail drawings for the 6X pre-expander, (3) completion of detail drawings for the nine mirrors that comprise pointing and tracking optomechanical subsystem, (4) continuation of detailing of mechanical portions of CMSS and modifications to accommodate new obscuration ratio, (5) qualitative operation of the optomechanical subsystem of the 10.6 um receiver achieved under experiment measurement task; receiver fully integrated and operation demonstrated over a 10 km experimental link, and (6) data collection task initiated to begin preparation of link analysis volumes.

Source record↗

Contribution of the Spacelab data management system to lower cost space research

This paper reviews the design and operation of the Spacelab data management system as it has evolved. Significant improvements and extensions of the original baseline system have been incorporated and will be discussed. They include the capability for the remote control of Spacelab subsystems, improved remote data acquisition units, a high-rate digital data multiplexer, and an improved high-rate digital recorder. Emphasis will be placed on the overall system aspects, including considerations on the use of minicomputers as an adjunct to the basic Spacelab data system. The approach for experiment related software production and integration will be addressed as well. The paper focuses on the contributions of the data management system in reducing the cost of research in Spacelab.

Burger, J. J.↗

Sediment measurement in estuarine and coastal areas

A survey of uses of estuarine and coastal areas is given. Problems associated with these uses are discussed, and data needs for intelligent management of these valuable areas are outlined. Suspended sediment measurements are seen to be one of the greatest needs. To help understand the complexity of the problem, a brief discussion of sediment mechanics is given, including sediment sources, characteristics, and transport. The impact of sediment mechanics on its direct measurement (sampling and analysis) is indicated, along with recommendations for directly obtaining representative data. Indirect measurement of suspended sediment by remote sensors is discussed both theoretically and in the light of some recent experiences. The need for an integrated, multidisciplinary program to solve the problem of quantitatively measuring suspended sediment with remote sensors is stressed, and several important considerations of such a program and benefits to be derived therefrom are briefly addressed.

Shelley, P. E.↗

Spacelab environmental control system

This paper describes the NASA/MSFC thermal control activities performed in support of the European design and development of the Spacelab environmental control system (ECS) and the integration of the ECS with experiments and with the Shuttle Orbiter. Thermal interfaces with the Orbiter are reviewed, including payload bay temperature profiles for the long module and pallet Spacelab configuration for the on-orbit mission phase. Thermal designs and predicted thermal performance are also reviewed for the module air cooling systems and specific experiment interfaces, such as the experiment dedicated heat exchanger and rack cooling.

Mitchell, K. L.↗

Vortex simulation of three-dimensional, spotlike disturbances in a laminar boundary layer

The growth of a turbulent spot in a laminar boundary layer as the spot evolves from a localized disturbance in the layer, is simulated numerically using a three-dimensional vortex filament description of the vorticity field. The filaments are marked with a sequence of node points which are tracked in a Lagrangian reference frame. Velocity computation is done by Biot-Savart integration. Although some discrepancies with experiment appear to exist in the near wall region, the gross properties of the spot, including the velocities of the leading and trailing edges and the velocity perturbations away from the wall, are in good agreement with experiment.

Leonard, A.↗

Vortex simulation of three-dimensional, spotlike disturbances in a laminar boundary layer

The growth of a turbulent spot in a laminar boundary layer, as the spot evolves from a localized disturbance in the layer, is simulated numerically using a three-dimensional vortex filament description of the vorticity field. The filaments are marked with a sequence of mode points which are tracked in a Lagrangian reference frame. Velocity computation is done by Biot-Savart integration. Although some discrepancies with experiment appear to exist in the near wall region, the gross properties of the spot, including the velocities of the leading and trailing edges and the velocity perturbations away from the wall, are in good agreement with experiment.

Leonard, A.↗

A statistical evaluation of the advantages of Landsat Thematic Mapper data in comparison to Multispectral Scanner data

On July 16, 1982, the second decade of land remote sensing from space was inaugurated with the successful launch of Landsat-4. This satellite carries the Multispectral Scanner (MSS) and a new sensor, the Thematic Mapper (TM). The TM represents the result of an effort in which all of the major improvements in remote-sensing capability were simultaneously integrated into one system. An experiment was developed and conducted to quantify the effect of each TM sensor parameter on classification accuracy. This paper discusses the experimental design and summarizes the results obtained using TM data acquired over the Washington, DC area on November 2, 1982. Attention is given to a study site/data description, the experimental design, photointerpretation and digitization, spectral simulation, radiometric simulation, and spatial simulation.

Williams, D. L.↗