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DOE OSTI2023

A unique, ring-like radio source with quadrilateral structure detected with machine learning

ABSTRACT We report the discovery of a unique object in the MeerKAT Galaxy Cluster Legacy Survey (MGCLS) using the machine learning anomaly detection framework astronomaly. This strange, ring-like source is 30′ from the MGCLS field centred on Abell 209, and is not readily explained by simple physical models. With an assumed host galaxy at redshift 0.55, the luminosity (1025 W Hz−1) is comparable to powerful radio galaxies. The source consists of a ring of emission 175 kpc across, quadrilateral enhanced brightness regions bearing resemblance to radio jets, two ‘ears’ separated by 368 kpc, and a diffuse envelope. All of the structures appear spectrally steep, ranging from −1.0 to −1.5. The ring has high polarization (25 per cent) except on the bright patches (<10 per cent). We compare this source to the Odd Radio Circles recently discovered in ASKAP data and discuss several possible physical models, including a termination shock from starburst activity, an end-on radio galaxy, and a supermassive black hole merger event. No simple model can easily explain the observed structure of the source. This work, as well as other recent discoveries, demonstrates the power of unsupervised machine learning in mining large data sets for scientifically interesting sources.

Astronomy & Astrophysics↗

DOE OSTI2023

Two-dimensional simulations of internal gravity waves in a $\mathrm{5M_⊙}$ zero-age-main-sequence model

Main-sequence intermediate-mass stars present a radiative envelope that supports internal gravity waves (IGWs). Excited at the boundary with the convective core, IGWs propagate towards the stellar surface and are suspected to impact physical processes such as rotation and chemical mixing. Using the fully compressible time-implicit code MUSIC, we study IGWs in two-dimensional simulations of a zero-age-main-sequence 5 solar mass star model up to 91 percent of the stellar radius with different luminosity and radiative diffusivity enhancements. Our results show that low-frequency waves excited by core convection are strongly impacted by radiative effects as they propagate. This impact depends on the radial profile of radiative diffusivity which increases by almost 5 orders of magnitude between the centre of the star and the top of the simulation domain. In the upper layers of the simulation domain, we observe an increase of the temperature. Our study suggests that this is due to heat added in these layers by IGWs damped by radiative diffusion. We show that non-linear effects linked to large amplitude IGWs may be relevant just above the convective core. Both these effects are intensified by the artificial enhancement of the luminosity and radiative diffusivity, with enhancement factors up to 10 4 times the realistic values. Our results also highlight that direct comparison between numerical simulations with enhanced luminosity and observations must be made with caution. Finally, our work suggests that thermal effects linked to the damping of IGWs could have a non-negligible impact on stellar structure.

79 ASTRONOMY AND ASTROPHYSICS↗

DOE OSTI2023

Constraining quenching time-scales in galaxy clusters by forward-modelling stellar ages and quiescent fractions in projected phase space

We forward-model mass-weighted stellar ages (MWAs) and quiescent fractions (f Q ) in projected phase space (PPS), using data from the Sloan Digital Sky Survey, to jointly constrain an infall quenching model for galaxies in log (M vir /M ⊙ ) > 14 galaxy clusters at z ∼ 0. We find the average deviation in MWA from the MWA–M⋆ relation depends on position in PPS, with a maximum difference between the inner cluster and infalling interloper galaxies of ∼1 Gyr. Our model employs infall information from N-body simulations and stochastic star-formation histories from the universemachine model. We find total quenching times of t Q = 3.7 ± 0.4 Gyr and t Q = 4.0 ± 0.2 Gyr after first pericentre, for 9 < log (M ⋆ /M ⊙ ) < 10 and 10 < log (M ⋆ /M ⊙ ) < 10.5 galaxies, respectively. By using MWAs, we break the degeneracy in time of quenching onset and time-scale of star formation rate (SFR) decline. We find that time of quenching onset relative to pericentre is $t_{\mathrm{delay}}=3.5^{+0.6}_{-0.9}$ Gyr and $t_{\mathrm{delay}}=-0.3^{+0.8}_{-1.0}$ Gyr for 9 < log (M ⋆ /M ⊙ ) < 10 and 10 < log (M ⋆ /M ⊙ ) < 10.5 galaxies, respectively, and exponential SFR suppression time-scales are τenv ≤ 1.0 Gyr for 9 < log (M ⋆ /M ⊙ ) < 10 galaxies and τenv ∼ 2.3 Gyr for 10 < log (M ⋆ /M ⊙ ) < 10.5 galaxies. Stochastic star formation histories remove the need for rapid infall quenching to maintain the bimodality in the SFR of cluster galaxies; the depth of the green valley prefers quenching onsets close to first pericentre and a longer quenching envelope, in slight tension with the MWA-driven results. Taken together these results suggest that quenching begins close to, or just after pericentre, but the time-scale for quenching to be fully complete is much longer and therefore ram-pressure stripping is not complete on first pericentric passage.

79 ASTRONOMY AND ASTROPHYSICS↗

DOE OSTI2023

Wet compaction to a blue nugget: a critical phase in galaxy evolution

ABSTRACT We utilize high-resolution cosmological simulations to reveal that high-redshift galaxies tend to undergo a robust ‘wet compaction’ event when near a ‘golden’ stellar mass of $\sim \!\!10^{10}\, \rm M_\odot$ . This is a gaseous shrinkage to a compact star-forming phase, a ‘blue nugget’ (BN), followed by central quenching of star formation to a compact passive stellar bulge, a ‘red nugget’ (RN), and a buildup of an extended gaseous disc and ring. Such nuggets are observed at cosmic noon and seed today’s early-type galaxies. The compaction is triggered by a drastic loss of angular momentum due to, e.g. wet mergers, counter-rotating cold streams, or violent disc instability. The BN phase marks drastic transitions in the galaxy structural, compositional, and kinematic properties. The transitions are from star forming to quenched inside-out, from diffuse to compact with an extended disc or ring and a stellar envelope, from dark matter to baryon central dominance, from prolate to oblate stellar shape, from pressure to rotation support, from low to high metallicity, and from supernova to AGN feedback. The central black hole growth, first suppressed by supernova feedback when below the golden mass, is boosted by the compaction, and the black hole keeps growing once the halo is massive enough to lock in the supernova ejecta.

Lapiner, Sharon (ORCID:0009000409733232)↗

DOE OSTI2023

Three approaches for the classification of protoneutron star oscillation modes

ABSTRACT The future detection of gravitational waves (GWs) from a Galactic core-collapse supernova will provide information on the physics inside protoneutron stars (PNS). In this work, we apply three different classification methods for the PNS non-radial oscillation modes: Cowling classification, Generalized Cowling Nomenclature (GCN), and a classification based on modal properties (CBMP). Using PNS models from 3D simulations of core-collapse supernovae, we find that in the early stages of the PNS evolution, typically 0.4 s after the bounce, the Cowling classification is inconsistent, but the GCN and the CBMP provide complementary information that helps to understand the evolution of the modes. In the GCN, we note several avoided crossings as the mode frequencies evolve at early times, while the CBMP tracks the modes across the avoided crossings. We verify that the strongest emission of GWs by the PNS corresponds to the f mode in the GCN, indicating that the mode trapping region alternates between the core and the envelope at each avoided crossing. At later times, approximately 0.4 s after the bounce, the three classification methods present a similar description of the mode spectrum. We use our results to test universal relations for the PNS modes according to their classification and find that the behaviour of the universal relations for f and p modes is remarkably simple in the CBMP.

Astronomy & Astrophysics↗

DOE OSTI2023

GMRT H I mapping of mid-infrared bright blue compact dwarf galaxies W1016+3754 and W2326+0608

We present the results from deep 21 cm H i mapping of two nearby Blue Compact Dwarf Galaxies (BCDGs), W1016+3754 and W2326+0608, using the Giant Metrewave Radio Telescope (GMRT). These BCDGs are bright in mid-infrared data and undergoing active star formation. With the GMRT observations, we investigate the role of cold neutral gas as the fuel resource of the current intensive star formation activity. Star formation in these galaxies is likely to be due to the infall of H I gas triggered by gravitational perturbation from nearby galaxies. The BCDG W2326+0608 and nearby galaxy SDSS J232603.86+060835.8 share a common H I envelope. We find star formation takes place in the high H I column density gas (≳10 21 cm −2 ) regions for both BCDGs. The recent starburst and infall of metal-free gas have kept the metallicity low for the BCDG W1016+3754. The metallicity for W2326+0608 is higher, possibly due to tidal interaction with the nearby galaxy SDSS J232603.86+060835.8.

79 ASTRONOMY AND ASTROPHYSICS↗

DOE OSTI2023

TOI-908: a planet at the edge of the Neptune desert transiting a G-type star

ABSTRACT We present the discovery of an exoplanet transiting TOI-908 (TIC-350153977) using data from TESS sectors 1, 12, 13, 27, 28, and 39. TOI-908 is a T = 10.7 mag G-dwarf (Teff = 5626 ± 61 K) solar-like star with a mass of 0.950 ± 0.010 M⊙ and a radius of 1.028 ± 0.030 R⊙. The planet, TOI-908 b, is a 3.18 ± 0.16 R⊕ planet in a 3.18 d orbit. Radial velocity measurements from HARPS reveal TOI-908 b has a mass of approximately 16.1 ± 4.1 M⊕, resulting in a bulk planetary density of $2.7^{+0.2}_{-0.4}$ g cm−3. TOI-908 b lies in a sparsely populated region of parameter space known as the Neptune desert. The planet likely began its life as a sub-Saturn planet before it experienced significant photoevaporation due to X-rays and extreme ultraviolet radiation from its host star, and is likely to continue evaporating, losing a significant fraction of its residual envelope mass.

Hawthorn, Faith (ORCID:000000028675182X)↗

DOE OSTI2023

An investigation of non-canonical mixing in red giant stars using APOGEE 12 C/ 13 C ratios observed in open cluster stars

Standard stellar evolution theory poorly predicts the surface abundances of chemical species in low-mass, red giant branch (RGB) stars. Observations show an enhancement of p–p chain and CNO cycle products in red giant envelopes, which suggests the existence of non-canonical mixing that brings interior burning products to the surface of these stars. The 12 C/ 13 C ratio is a highly sensitive abundance metric used to probe this mixing. We investigate extra RGB mixing by examining: (1) how 12 C/ 13 C is altered along the RGB, and (2) how 12 C/ 13 C changes for stars of varying age and mass. Our sample consists of 43 red giants, spread over 15 open clusters from the Sloan Digital Sky Survey’s APOGEE DR17, that have reliable 12 C/ 13 C ratios derived from their APOGEE spectra. We vetted these 12 C/ 13 C ratios and compared them as a function of evolution and age/mass to the standard mixing model of stellar evolution, and to a model that includes prescriptions for RGB thermohaline mixing and stellar rotation. We find that the observations deviate from standard mixing models, implying the need for extra mixing. Additionally, some of the abundance patterns depart from the thermohaline model, and it is unclear whether these differences are due to incomplete observations, issues inherent to the model, our assumption of the cause of extra mixing, or any combination of these factors. Nevertheless, the surface abundances across our age/mass range clearly deviate from the standard model, agreeing with the notion of a universal mechanism for RGB extra mixing in low-mass stars.

79 ASTRONOMY AND ASTROPHYSICS↗

DOE OSTI2023

Asteroseismological analysis of the polluted ZZ Ceti star G 29 – 38 with TESS

G29 – 38 (TIC 422526868) is one of the brightest (V = 13.1) and closest (d = 17.51 pc) pulsating white dwarfs with a hydrogen-rich atmosphere (DAV/ZZ Ceti class). It was observed by the TESS spacecraft in sectors 42 and 56. The atmosphere of G 29 – 38 is polluted by heavy elements that are expected to sink out of visible layers on short time-scales. Here, the photometric TESS data set spans ~51 d in total, and from this, we identified 56 significant pulsation frequencies, that include rotational frequency multiplets. In addition, we identified 30 combination frequencies in each sector. The oscillation frequencies that we found are associated with g-mode pulsations, with periods spanning from ~ 260 to ~ 1400 s. We identified rotational frequency triplets with a mean separation δν ℓ = 1 of 4.67 μHz and a quintuplet with a mean separation δν ℓ = 2 of 6.67 μHz, from which we estimated a rotation period of about 1.35 ± 0.1 d. We determined a constant period spacing of 41.20 s for ℓ = 1 modes and 22.58 s for ℓ = 2 modes. We performed period-to-period fit analyses and found an asteroseismological model with M * /M ⊙ = 0.632 ± 0.03, K, and log g = 8.048 ± 0.005 (with a hydrogen envelope mass of M H ~ 5.6 × 10 –5 M * ), in good agreement with the values derived from spectroscopy. We obtained an asteroseismic distance of 17.54 pc, which is in excellent agreement with that provided by Gaia (17.51 pc).

79 ASTRONOMY AND ASTROPHYSICS↗

DOE OSTI2023

High-energy neutrino emission from magnetized jets of rapidly rotating protomagnetars

ABSTRACT Relativistic jets originating from protomagnetar central engines can lead to long duration gamma-ray bursts (GRBs) and are considered potential sources of ultra-high-energy cosmic rays and secondary neutrinos. We explore the propagation of such jets through a broad range of progenitors, from stars which have shed their envelopes to supergiants which have not. We use a semi-analytical spin-down model for the strongly magnetized and rapidly rotating protoneutron star (PNS) to investigate the role of central engine properties such as the surface dipole field strength, initial rotation period, and jet opening angle on the interactions and dynamical evolution of the jet-cocoon system. With this model, we determine the properties of the relativistic jet, the mildly relativistic cocoon, and the collimation shock in terms of system parameters such as the time-dependent jet luminosity, injection angle, and density profile of the stellar medium. We also analyse the criteria for a successful jet breakout, the maximum energy that can be deposited into the cocoon by the relativistic jet, and structural stability of the magnetized outflow relative to local instabilities. Lastly, we compute the high-energy neutrino emission as these magnetized outflows burrow through their progenitors. Precursor neutrinos from successful GRB jets are unlikely to be detected by IceCube, which is consistent with the results of previous works. On the other hand, we find that high-energy neutrinos may be produced for extended progenitors like blue and red supergiants, and we estimate the detectability of neutrinos with next generation detectors such as IceCube-Gen2.

Astronomy & Astrophysics↗

DOE OSTI2024

Stellar wind impact on early atmospheres around unmagnetized Earth-like planets

ABSTRACT Stellar rotation at early ages plays a crucial role in the survival of primordial atmospheres around Earth-mass exoplanets. Earth-like planets orbiting fast-rotating stars may undergo complete photoevaporation within the first few hundred Myr driven by the enhanced stellar XUV [X-rays and extreme ultraviolet (EUV)] radiation, while planets orbiting slow-rotating stars are expected to experience difficulty in losing their primordial envelopes. Besides the action of stellar radiation, stellar winds induce additional erosion on these primordial atmospheres, altering their morphology, extent, and causing supplementary atmospheric losses. In this paper, we study the impact of activity-dependent stellar winds on primordial atmospheres to evaluate the extent to which the action of these winds can be significant in the whole planetary evolution at early evolutionary stages. We performed 3D magnetohydrodynamical (MHD) simulations of the interaction of photoevaporating atmospheres around unmagnetized Earth-mass planets in the time span between 50 and 500 Myr, analysing the joint evolution of stellar winds and atmospheres for both fast- and slow-rotating stars. Our results reveal substantial changes in the evolution of primordial atmospheres when influenced by fast-rotating stars, with a significant reduction in extent at early ages. In contrast, atmospheres embedded in the stellar winds from slow-rotating stars remain largely unaltered. The interaction of the magnetized stellar winds with the ionized upper atmospheres of these planets allows us to evaluate the formation and evolution of different MHD structures, such as double bow shocks and induced magnetospheres. This work will shed light on the first evolutionary stages of Earth-like exoplanets, which are of crucial relevance in terms of planet habitability.

Astronomy & Astrophysics↗

DOE OSTI2024

TOI-2374 b and TOI-3071 b: two metal-rich sub-Saturns well within the Neptunian desert

ABSTRACT We report the discovery of two transiting planets detected by the Transiting Exoplanet Survey Satellite (TESS), TOI-2374 b and TOI-3071 b, orbiting a K5V and an F8V star, respectively, with periods of 4.31 and 1.27 d, respectively. We confirm and characterize these two planets with a variety of ground-based and follow-up observations, including photometry, precise radial velocity monitoring and high-resolution imaging. The planetary and orbital parameters were derived from a joint analysis of the radial velocities and photometric data. We found that the two planets have masses of (57 ± 4) M⊕ or (0.18 ± 0.01) MJ, and (68 ± 4) M⊕ or (0.21 ± 0.01) MJ, respectively, and they have radii of (6.8 ± 0.3) R⊕ or (0.61 ± 0.03) RJ and (7.2 ± 0.5) R⊕ or (0.64 ± 0.05) RJ, respectively. These parameters correspond to sub-Saturns within the Neptunian desert, both planets being hot and highly irradiated, with Teq ≈ 745 K and Teq ≈ 1812 K, respectively, assuming a Bond albedo of 0.5. TOI-3071 b has the hottest equilibrium temperature of all known planets with masses between 10 and 300 M⊕ and radii less than 1.5 RJ. By applying gas giant evolution models we found that both planets, especially TOI-3071 b, are very metal-rich. This challenges standard formation models which generally predict lower heavy-element masses for planets with similar characteristics. We studied the evolution of the planets’ atmospheres under photoevaporation and concluded that both are stable against evaporation due to their large masses and likely high metallicities in their gaseous envelopes.

Hacker, Alejandro (ORCID:0009000994520181)↗

DOE OSTI2024

Fate of supernova progenitors in massive binary systems

ABSTRACT How massive stars end their lives depends on the core mass, core angular momentum, and hydrogen envelopes at death. However, these key physical facets of stellar evolution can be severely affected by binary interactions. In turn, the effectiveness of binary interactions itself varies greatly depending on the initial conditions of the binaries, making the situation much more complex. We investigate systematically how binary interactions influence core–collapse progenitors and their fates. Binary evolution simulations are performed to survey the parameter space of supernova progenitors in solar metallicity binary systems and to delineate major evolutionary paths. We first study fixed binary mass ratios ($q=M_2/M_1$ = 0.5, 0.7, and 0.9) to elucidate the impacts of initial mass and initial separation on the outcomes, treating separately Type Ibc supernova, Type II supernova, accretion-induced collapse (AIC), rapidly rotating supernova (Ibc-R), black hole formation, and long gamma ray burst (long GRB). We then conduct 12 binary population synthesis model calculations, varying the initial condition distributions and binary evolution parameters, to estimate various supernova fractions. We obtain a Milky Way supernova rate $R_{\rm SN} = (1.78$–$2.47) \times 10^{-2} \, {\rm yr}^{-1}$ which is consistent with observations. We find the rates of AIC, Ibc-R, and long GRB to be $\sim 1/100$ the rate of regular supernovae. Our estimated long GRB rates are higher than the observed long GRB rate and close to the low luminosity GRB rate, although care must be taken considering our models are computed with solar metallicity. Furthering binary modelling and improving the inputs one by one will enable more detailed studies of these and other transients associated with massive stars.

Astronomy & Astrophysics↗

DOE OSTI2024

An attractive model: simulating fuzzy dark matter with attractive self-interactions

ABSTRACT Fuzzy dark matter (FDM), comprised of ultralight ($m \sim 10^{-22}\,{\rm eV}$) boson particles, has received significant attention as a viable alternative to cold dark matter (CDM), as it approximates CDM on large scales (${\gtrsim}1$ Mpc) while potentially resolving some of its small-scale problems via kiloparsec-scale quantum interference. However, the most basic FDM model, with one free parameter (the boson mass), is subject to a tension: small boson masses yield the desired cores of dwarf galaxies but underpredict structure in the Lyman-α forest, while large boson masses render FDM effectively identical to CDM. This Catch-22 problem may be alleviated by considering an axion-like particle with attractive particle self-interactions. We simulate an idealized FDM halo with self-interactions parametrized by an energy decay constant $f \sim 10^{15}~\rm {GeV}$ related to the axion symmetry-breaking conjectured to solve the strong-CP problem in particle physics. We observe solitons, a hallmark of FDM, condensing within a broader halo envelope, and find that the density profile and soliton mass depend on self-interaction strength. We propose generalized formulae to extend those from previous works to include self-interactions. We also investigate a critical mass threshold predicted for strong interactions at which the soliton collapses into a compact, unresolved state. We find that the collapse happens quickly, and its effects are initially contained to the central region of the halo.

Painter, Connor A. (ORCID:0000000235314806)↗

DOE OSTI2024

Nanoscale elemental and morphological imaging of nitrogen-fixing cyanobacteria

Nitrogen-fixing cyanobacteria bind atmospheric nitrogen and carbon dioxide using sunlight. This experimental study focused on a laboratory-based model system, Anabaena sp., in nitrogen-depleted culture. When combined nitrogen is scarce, the filamentous prokaryotes reconcile photosynthesis and nitrogen fixation by cellular differentiation into heterocysts. To better understand the influence of micronutrients on cellular function, 2D and 3D synchrotron X-ray fluorescence mappings were acquired from whole biological cells in their frozen-hydrated state at the Bionanoprobe, Advanced Photon Source. To study elemental homeostasis within these chain-like organisms, biologically relevant elements were mapped using X-ray fluorescence spectroscopy and energy-dispersive X-ray microanalysis. Higher levels of cytosolic K + , Ca 2+ , and Fe 2+ were measured in the heterocyst than in adjacent vegetative cells, supporting the notion of elevated micronutrient demand. P-rich clusters, identified as polyphosphate bodies involved in nutrient storage, metal detoxification, and osmotic regulation, were consistently co-localized with K + and occasionally sequestered Mg 2+ , Ca 2+ , Fe 2+ , and Mn 2+ ions. Machine-learning-based k-mean clustering revealed that P/K clusters were associated with either Fe or Ca, with Fe and Ca clusters also occurring individually. In accordance with XRF nanotomography, distinct P/K-containing clusters close to the cellular envelope were surrounded by larger Ca-rich clusters. The transition metal Fe, which is a part of nitrogenase enzyme, was detected as irregularly shaped clusters. The elemental composition and cellular morphology of diazotrophic Anabaena sp. was visualized by multimodal imaging using atomic force microscopy, scanning electron microscopy, and fluorescence microscopy. This paper discusses the first experimental results obtained with a combined in-line optical and X-ray fluorescence microscope at the Bionanoprobe.

Anabaena sp↗

DOE OSTI2025

Packaged delivery of CRISPR–Cas9 ribonucleoproteins accelerates genome editing

Effective genome editing requires a sufficient dose of CRISPR–Cas9 ribonucleoproteins (RNPs) to enter the target cell while minimizing immune responses, off-target editing, and cytotoxicity. Clinical use of Cas9 RNPs currently entails electroporation into cells ex vivo, but no systematic comparison of this method to packaged RNP delivery has been made. Here we compared two delivery strategies, electroporation and enveloped delivery vehicles (EDVs), to investigate the Cas9 dosage requirements for genome editing. Using fluorescence correlation spectroscopy, we determined that >1300 Cas9 RNPs per nucleus are typically required for productive genome editing. EDV-mediated editing was >30-fold more efficient than electroporation, and editing occurs at least 2-fold faster for EDV delivery at comparable total Cas9 RNP doses. We hypothesize that differences in efficacy between these methods result in part from the increased duration of RNP nuclear residence resulting from EDV delivery. Our results directly compare RNP delivery strategies, showing that packaged delivery could dramatically reduce the amount of CRISPR–Cas9 RNPs required for experimental or clinical genome editing.

60 APPLIED LIFE SCIENCES↗

DOE OSTI2023

Chlamydomonas mutants lacking chloroplast TRIOSE PHOSPHATE TRANSPORTER3 are metabolically compromised and light sensitive

Abstract Modulation of photoassimilate export from the chloroplast is essential for controlling the distribution of fixed carbon in the cell and maintaining optimum photosynthetic rates. In this study, we identified chloroplast TRIOSE PHOSPHATE/PHOSPHATE TRANSLOCATOR 2 (CreTPT2) and CreTPT3 in the green alga Chlamydomonas (Chlamydomonas reinhardtii), which exhibit similar substrate specificities but whose encoding genes are differentially expressed over the diurnal cycle. We focused mostly on CreTPT3 because of its high level of expression and the severe phenotype exhibited by tpt3 relative to tpt2 mutants. Null mutants for CreTPT3 had a pleiotropic phenotype that affected growth, photosynthetic activities, metabolite profiles, carbon partitioning, and organelle-specific accumulation of H2O2. These analyses demonstrated that CreTPT3 is a dominant conduit on the chloroplast envelope for the transport of photoassimilates. In addition, CreTPT3 can serve as a safety valve that moves excess reductant out of the chloroplast and appears to be essential for preventing cells from experiencing oxidative stress and accumulating reactive oxygen species, even under low/moderate light intensities. Finally, our studies indicate subfunctionalization of the TRIOSE PHOSPHATE/PHOSPHATE TRANSLOCATOR (CreTPT) transporters and suggest that there are differences in managing the export of photoassimilates from the chloroplasts of Chlamydomonas and vascular plants.

Huang, (黄伟超), Weichao (ORCID:0000000189403110)↗

DOE OSTI2025

A family of α/β hydrolases removes phytol from chlorophyll metabolites for tocopherol biosynthesis in Arabidopsis

Tocopherol synthesis requires phytyl diphosphate derived from phytol esterified to chlorophyll metabolites. The >600-member Arabidopsis thaliana α/β hydrolase (ABH) gene family contains 4 members that can release phytol from chlorophyll metabolites in vitro; however, only pheophytinase (PPH) affects tocopherol synthesis when mutated, reducing seed tocopherols by 5%. We report the biochemical analysis of 2 previously uncharacterized ABHs, chlorophyll dephytylase 2 (CLD2) and CLD3, and their respective mutants singly and in combinations with pph and cld1 alleles. While all CLDs localized to the thylakoid and could hydrolyze phytol from chlorophylls and Pheophytin a in vitro, CLD3 had the highest in vitro activity and the largest effect on tocopherol synthesis in vivo. The 3 CLDs acted cooperatively to provide phytol for 31% of tocopherols synthesized in light-grown leaf tissue. Dark-induced leaf senescence assays showed PPH is required for 18% of the tocopherols synthesized. Though the cld123 triple mutant had no impact on dark-induced tocopherol content, cld123 in the pph background reduced tocopherol levels by an additional 18%. In seeds, pph and cld123 each reduced tocopherol content by 5% and by 15% in the cld123pph quadruple mutant. VTE7 ( ViTamin E7 ) is an envelope-localized ABH that specifically affects chlorophyll biosynthetic intermediates in vivo and is required for 55% of seed tocopherol synthesis. The introduction of cld123pph into the vte7 background further reduced seed tocopherol levels to 23% of that of the wild type. Our findings demonstrate that phytol provision for tocopherol biosynthesis and homeostasis is a complex process involving the coordinated spatiotemporal expression of multiple ABH family members.

arabidopsis↗