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At least 1,675 records · Page 93

Approximating Nash Equilibrium in Day-ahead Electricity Market Bidding with Multi-agent Deep Reinforcement Learning

In this paper, a day-ahead electricity market bidding problem with multiple strategic generation company (GEN-CO) bidders is studied. The problem is formulated as a Markov game model, where GENCO bidders interact with each other todevelop their optimal day-ahead bidding strategies. Considering unobservable information in the problem, a model-free and data-driven approach, known as multi-agent deep deterministic policy gradient (MADDPG), is applied for approximating the Nash equilibrium (NE) in the above Markov game. The MADDPG algorithm has the advantage of generalization due to the automatic feature extraction ability of the deep neural networks. The algorithm is tested on an IEEE 30-bus system with three competitive GENCO bidders in both an uncongested caseand a congested case. Comparisons with a truthful bidding strategy and state-of-the-art deep reinforcement learning methods including deep Q network and deep deterministic policy gradient (DDPG) demonstrate that the applied MADDPG algorithm can find a superior bidding strategy for all the market participants with increased profit gains. In addition, the comparison with a conventional model-based method shows that the MADDPG algorithm has higher computational efficiency, which is feasible for real-world applications.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Update of GRASP/Ada reverse engineering tools for Ada

The GRASP/Ada project (Graphical Representations of Algorithms, Structures, and Processes for Ada) successfully created and prototyped a new algorithmic level graphical representation for Ada software, the Control Structure Diagram (CSD). The primary impetus for creation of the CSD was to improve the comprehension efficiency of Ada software and, as a result, improve reliability and reduce costs. The emphasis was on the automatic generation of the CSD from Ada PDL or source code to support reverse engineering and maintenance. The CSD has the potential to replace traditional pretty printed Ada source code. In Phase 1 of the GRASP/Ada project, the CSD graphical constructs were created and applied manually to several small Ada programs. A prototype CSD generator (Version 1) was designed and implemented using FLEX and BISON running under VMS on a VAX 11-780. In Phase 2, the prototype was improved and ported to the Sun 4 platform under UNIX. A user interface was designed and partially implemented using the HP widget toolkit and the X Windows System. In Phase 3, the user interface was extensively reworked using the Athena widget toolkit and X Windows. The prototype was applied successfully to numerous Ada programs ranging in size from several hundred to several thousand lines of source code. Following Phase 3,e two update phases were completed. Update'92 focused on the initial analysis of evaluation data collected from software engineering students at Auburn University and the addition of significant enhancements to the user interface. Update'93 (the current update) focused on the statistical analysis of the data collected in the previous update and preparation of Version 3.4 of the prototype for limited distribution to facilitate further evaluation. The current prototype provides the capability for the user to generate CSD's from Ada PDL or source code in a reverse engineering as well as forward engineering mode with a level of flexibility suitable for practical application. An overview of the GRASP/Ada project with an emphasis on the current update is provided.

Cross, James H., II↗

Notional Airspace Operations Demonstration Plan

The airspace operations demonstration (AOD) is intended to show that the Access 5 Step 1 functional requirements can be met. The demonstration will occur in two phases. The initial on-range phase will be carried out in restricted airspace to demonstrate the cooperative collision avoidance (CCA) functional requirements and to provide risk-reduction for the AOD by allowing the test team to rehearse some elements of the demonstration mission. The CCA system to be used in these flights is based on Automatic Dependent Surveillance-Broadcast (ADS-B) which is a commercially-available system by which airplanes constantly broadcast their current position and altitude to other aircraft and ground resources over a dedicated radio datalink. The final phase will occur in the national airspace (NAS) and will be the formal demonstration of the remainder of the proposed functional requirements. The general objectives of the AOD are as follows: (1) Demonstrate that the UAS can aviate in the NAS (2) Demonstrate that the UAS can navigate in the NAS (3) Demonstrate that the UAS can communicate with the NAS (4) Demonstrate that the UAS can perform selected collision avoidance functions in the NAS (5) Demonstrate that the UAS can evaluate and avoid weather conflicts in the NAS (6) Demonstrate that the UAS can provide adequate command and control in the NAS In addition to the stated objectives, there are a number of goals for the flight demonstration. The demo can be accomplished successfully without achieving these goals, but these goals are to be used as a guideline for preparing for the mission. The goals are: (1) Mission duration of at least 24 hours (2) Loiter over heavy traffic to evaluate the data block issue identified during the Access 5 Airspace Operations Simulations (3) Document the contingency management process and lessons learned (4) Document the coordination process for Ground Control Stations (GCS) handoff (5) Document lessons learned regarding the process of flying in the NAS Preliminary planning for a notional mission to achieve the objectives and goals has been prepared. The planning is intended to serve as a guide for detailed planning of the AOD.

Trongale, Nicholas A.↗

Building Energy Management Open Source Software

This is the repository for Building Energy Management Open Source Software (BEMOSS), which is an open source operating system that is engineered to improve sensing and control of equipment in small- and medium-sized commercial buildings. BEMOSS offers the following key features: (1) Open source, open architecture – BEMOSS is an open source operating system that is built upon VOLTTRON – a distributed agent platform developed by Pacific Northwest National Laboratory (PNNL). BEMOSS was designed to make it easy for hardware manufacturers to seamlessly interface their devices with BEMOSS. Software developers can also contribute to adding additional BEMOSS functionalities and applications. (2) Plug & play – BEMOSS was designed to automatically discover supported load controllers (including smart thermostats, VAV/RTUs, lighting load controllers and plug load controllers) in commercial buildings. (3) Interoperability – BEMOSS was designed to work with load control devices form different manufacturers that operate on different communication technologies and data exchange protocols. (4) Cost effectiveness – Implementation of BEMOSS deemed to be cost-effective as it was built upon a robust open source platform that can operate on a low-cost single-board computer, such as Odroid. This feature could contribute to its rapid deployment in small- or medium-sized commercial buildings. (5) Scalability and ease of deployment – With its multi-node architecture, BEMOSS provides a distributed architecture where load controllers in a multi-floor and high occupancy building could be monitored and controlled by multiple single-board computers hosting BEMOSS. This makes it possible for a building engineer to deploy BEMOSS in one zone of a building, be comfortable with its operation, and later on expand the deployment to the entire building to make it more energy efficient. (6) Ability to provide local and remote monitoring – BEMOSS provides both local and remote monitoring ability with role-based access control. (7) Security – In addition to built-in security features provided by VOLTTRON, BEMOSS provides enhanced security features, including BEMOSS discovery approval process, encrypted core-to-node communication, thermostat anti-tampering feature and many more. (8) Support from the Advisory Committee – BEMOSS was developed in consultation with an advisory committee from the beginning of the project. BEMOSS advisory committee comprises representatives from 22 organizations from government and industry.

Source record↗

Designing an autonomous environment for mission critical operation of the EUVE satellite

Since the launch of NASA's Extreme Ultraviolet Explorer (EUVE) satellite in 1992, there has only been a handful of occurrences that have warranted manual intervention in the EUVE Science Operations Center (ESOC). So, in an effort to reduce costs, the current environment is being redesigned to utilize a combination of off-the-shelf packages and recently developed artificial intelligence (AI) software to automate the monitoring of the science payload and ground systems. The successful implementation of systemic automation would allow the ESOC to evolve from a seven day/week, three shift operation, to a seven day/week one shift operation. First, it was necessary to identify all areas considered mission critical. These were defined as follows: (1) The telemetry stream must be monitored autonomously and anomalies identified. (2) Duty personnel must be automatically paged and informed of the occurrence of an anomaly. (3) The 'basic' state of the ground system must be assessed. (4) Monitors should check that the systems and processes needed to continue in a 'healthy' operational mode are working at all times. (5) Network loads should be monitored to ensure that they stay within established limits. (6) Connectivity to Goddard Space Flight Center (GSFC) systems should be monitored as well, not just for connectivity of the network itself but also for the ability to transfer files. (7) All necessary peripheral devices should be monitored. This would include the disks, routers, tape drives, printers, tape carousel, and power supplies. (8) System daemons such as the archival daemon, the Sybase server, the payload monitoring software, and any other necessary processes should be monitored to ensure that they are operational. (9) The monitoring system needs to be redundant so that the failure of a single machine will not paralyze the monitors. (10) Notification should be done by means of looking though a table of the pager numbers for current 'on call' personnel. The software should be capable of dialing out to notify, sending email, and producing error logs. (11) The system should have knowledge of when real-time passes and tape recorder dumps will occur and should know that these passes and data transmissions are successful. Once the design criteria were established, the design team split into two groups: one that addressed the tracking, commanding, and health and safety of the science payload and another group that addressed the ground systems and communications aspects of the overall system.

Abedini, Annadiana↗

Building Energy Management Open Source Software

This is the repository for Building Energy Management Open Source Software (BEMOSS), which is an open source operating system that is engineered to improve sensing and control of equipment in small- and medium-sized commercial buildings. BEMOSS offers the following key features: (1) Open source, open architecture – BEMOSS is an open source operating system that is built upon VOLTTRON – a distributed agent platform developed by Pacific Northwest National Laboratory (PNNL). BEMOSS was designed to make it easy for hardware manufacturers to seamlessly interface their devices with BEMOSS. Software developers can also contribute to adding additional BEMOSS functionalities and applications. (2) Plug & play – BEMOSS was designed to automatically discover supported load controllers (including smart thermostats, VAV/RTUs, lighting load controllers and plug load controllers) in commercial buildings. (3) Interoperability – BEMOSS was designed to work with load control devices form different manufacturers that operate on different communication technologies and data exchange protocols. (4) Cost effectiveness – Implementation of BEMOSS deemed to be cost-effective as it was built upon a robust open source platform that can operate on a low-cost single-board computer, such as Odroid. This feature could contribute to its rapid deployment in small- or medium-sized commercial buildings. (5) Scalability and ease of deployment – With its multi-node architecture, BEMOSS provides a distributed architecture where load controllers in a multi-floor and high occupancy building could be monitored and controlled by multiple single-board computers hosting BEMOSS. This makes it possible for a building engineer to deploy BEMOSS in one zone of a building, be comfortable with its operation, and later on expand the deployment to the entire building to make it more energy efficient. (6) Ability to provide local and remote monitoring – BEMOSS provides both local and remote monitoring ability with role-based access control. (7) Security – In addition to built-in security features provided by VOLTTRON, BEMOSS provides enhanced security features, including BEMOSS discovery approval process, encrypted core-to-node communication, thermostat anti-tampering feature and many more. (8) Support from the Advisory Committee – BEMOSS was developed in consultation with an advisory committee from the beginning of the project. BEMOSS advisory committee comprises representatives from 22 organizations from government and industry.

Source record↗

Development of Real-Time Quantitative Safety Evaluation Method for Nuclear Power Plants

Human operators involved with large process control systems such as nuclear power plants (NPPs) perform significant roles in the operation of systems. In this reason, deficiencies in human factors such as poor HSI (Human System Interface) design, procedure, and training, are significant contributing factors to NPPs incidents and accidents. In this regard, many kinds of studies including human reliability analysis (HRA), operation support system, automation, have been conducted in order to reduce human errors. Among these fields of studies, automation has its own specialty since it mainly focuses on eliminating the human error-inducing tasks to reduce human error, while other topics are primarily focusing on reducing human error by aiding human operators during operation. It is commonly believed that replacing human operators to the automated system would guarantee greater efficiency, lower workloads, and fewer human errors. However, these beliefs are not always true in large and complex systems such as NPP, since excessive automation can generate new roles for human operators, change human operators' activities in unexpected ways, and inducing 'out-of-the-loop' (OOTL) problem. Especially, although human error probability drastically increases during abnormal situations in NPP due to overload of information, high workload, and short time available for diagnosis, automation is not actively adopted since conventional machine learning techniques are neither capable nor reliable to handle overwhelmingly complex abnormal situations in NPP. Recently, newly developed 'deep learning' techniques have been actively applied to many fields, and some of these studies proved that the artificial intelligences (AI) based on deep learning techniques show better performance than that of human being. In 2015, deep Q-network (DQN) which is one of the deep learning techniques was developed and applied to train AI that automatically plays various Atari 2800 games, and this AI surpassed the human-level playing in many kind of games. Also in 2016, 'AlphaGo', which was developed by 'Google Deepmind' based on deep learning technique to play the game of Go, was defeated Se-dol Lee who is the World Go champion with score of 4:1. In the point of view that the game of Go is considered as one of the challenging area in machine learning field, it is verified that these new machine learning techniques can perform well, even better than the human being in high-complexity tasks. Previously, most of AI applications in nuclear field were focusing on supporting human operators' tasks such as diagnosis and decision making by rapid classification and prediction, based on fixed training data sets. However, it is expected that AI can be applied to solve more complicated problems (i.e. automation during abnormal states in NPP) by adopting advanced machine learning methodologies. In order to apply the automation system in NPP, firstly it is needed to evaluate the status of the plant quantitatively in real-time, since the information about which state is better (i.e. safe) or worse (i.e. unsafe) is essential for training properly working automation AI. Currently, there are several methodologies for NPP safety evaluation such as probabilistic safety assessment (PSA), safety performance indicator (SPI). However, existing methodologies are not feasible for development of automated system since they are not capable for the cases which are not included in the underlying model, not able to consider delicate changes in the NPP, and hard to evaluate in real-time. Therefore, development of new NPP safety evaluation methodology which can cover previously mentioned requirements is needed to conduct the study on NPP automation further. In this study, the concept of early warning score (EWS) in medical field was adopted to develop the methodology which can evaluate the safety level of the NPP quantitatively and in real-time. (authors)

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

Automatic commanding of the Mars Observer Camera

Mars Observer, launched in September 1992, was intended to be a 'survey-type' mission that acquired global coverage of Mars from a low, circular, near-polar orbit during an entire Martian year. As such, most of its instruments had fixed data rates, wide fields of view, and relatively low resolution, with fairly limited requirements for commanding. An exception is the Mars Observer Camera, or MOC. The MOC consists of a two-color Wide Angle (WA) system that can acquire both global images at low resolution (7.5 km/pixel) and regional images at commandable resolutions up to 250 m/pixel. Complementing the WA is the Narrow Angle (NA) system, that can acquire images at 8 resolutions from 12 m/pixel to 1.5 m/pixel, with a maximum crosstrack dimension of 3 km. The MOC also provides various forms of data compression (both lossless and lossy), and is designed to work at data rates from 700 bits per second (bps) to over 80k bps. Because of this flexibility, developing MOC command sequences is much more difficult than the routine mode-changing that characterizes other instrument operations. Although the MOC cannot be pointed (the spacecraft is fixed nadir-pointing and has no scan platform), the timing, downlink stream allocation, compression type and parameters, and image dimensions of each image must be commanded from the ground, subject to the constraints inherent in the MOC and the spacecraft. To minimize the need for a large operations staff, the entire command generation process has been automated within the MOC Ground Data System. Following the loss of the Mars Observer spacecraft in August 1993, NASA intends to launch a new spacecraft, Mars Global Surveyor (MGS), in late 1996. This spacecraft will carry the MOC flight spare (MOC 2). The MOC 2 operations plan will be largely identical to that developed for MOC, and all of the algorithms described here are applicable to it.

Caplinger, Michael↗

Closed-loop optimization of fast-charging protocols for batteries with machine learning

Simultaneously optimizing many design parameters in time-consuming experiments causes bottlenecks in a broad range of scientific and engineering disciplines. One such example is process and control optimization for lithium-ion batteries during materials selection, cell manufacturing and operation. A typical objective is to maximize battery lifetime; however, conducting even a single experiment to evaluate lifetime can take months to years. Furthermore, both large parameter spaces and high sampling variability necessitate a large number of experiments. As such, the key challenge is to reduce both the number and the duration of the experiments required. Here we develop and demonstrate a machine learning methodology to efficiently optimize a parameter space specifying the current and voltage profiles of six-step, ten-minute fast-charging protocols for maximizing battery cycle life, which can alleviate range anxiety for electric-vehicle users. We combine two key elements to reduce the optimization cost: an early-prediction model, which reduces the time per experiment by predicting the final cycle life using data from the first few cycles, and a Bayesian optimization algorithm, which reduces the number of experiments by balancing exploration and exploitation to efficiently probe the parameter space of charging protocols. Using this methodology, we rapidly identify high-cycle-life charging protocols among 224 candidates in 16 days (compared with over 500 days using exhaustive search without early prediction), and subsequently validate the accuracy and efficiency of our optimization approach. Our closed-loop methodology automatically incorporates feedback from past experiments to inform future decisions and can be generalized to other applications in battery design and, more broadly, other scientific domains that involve time-intensive experiments and multi-dimensional design spaces.

25 ENERGY STORAGE↗

NASA Tech Briefs, June 2014

Topics include: Real-Time Minimization of Tracking Error for Aircraft Systems; Detecting an Extreme Minority Class in Hyperspectral Data Using Machine Learning; KSC Spaceport Weather Data Archive; Visualizing Acquisition, Processing, and Network Statistics Through Database Queries; Simulating Data Flow via Multiple Secure Connections; Systems and Services for Near-Real-Time Web Access to NPP Data; CCSDS Telemetry Decoder VHDL Core; Thermal Response of a High-Power Switch to Short Pulses; Solar Panel and System Design to Reduce Heating and Optimize Corridors for Lower-Risk Planetary Aerobraking; Low-Cost, Very Large Diamond-Turned Metal Mirror; Very-High-Load-Capacity Air Bearing Spindle for Large Diamond Turning Machines; Elevated-Temperature, Highly Emissive Coating for Energy Dissipation of Large Surfaces; Catalyst for Treatment and Control of Post-Combustion Emissions; Thermally Activated Crack Healing Mechanism for Metallic Materials; Subsurface Imaging of Nanocomposites; Self-Healing Glass Sealants for Solid Oxide Fuel Cells and Electrolyzer Cells; Micromachined Thermopile Arrays with Novel Thermo - electric Materials; Low-Cost, High-Performance MMOD Shielding; Head-Mounted Display Latency Measurement Rig; Workspace-Safe Operation of a Force- or Impedance-Controlled Robot; Cryogenic Mixing Pump with No Moving Parts; Seal Design Feature for Redundancy Verification; Dexterous Humanoid Robot; Tethered Vehicle Control and Tracking System; Lunar Organic Waste Reformer; Digital Laser Frequency Stabilization via Cavity Locking Employing Low-Frequency Direct Modulation; Deep UV Discharge Lamps in Capillary Quartz Tubes with Light Output Coupled to an Optical Fiber; Speech Acquisition and Automatic Speech Recognition for Integrated Spacesuit Audio Systems, Version II; Advanced Sensor Technology for Algal Biotechnology; High-Speed Spectral Mapper; "Ascent - Commemorating Shuttle" - A NASA Film and Multimedia Project DVD; High-Pressure, Reduced-Kinetics Mechanism for N-Hexadecane Oxidation; Method of Error Floor Mitigation in Low-Density Parity-Check Codes; X-Ray Flaw Size Parameter for POD Studies; Large Eddy Simulation Composition Equations for Two-Phase Fully Multicomponent Turbulent Flows; Scheduling Targeted and Mapping Observations with State, Resource, and Timing Constraints;

Source record↗

Polarized Radar for Detection and Automatic Non-Visual Assessment of Unmanned Aerial Systems

This Laboratory Directed Research and Development (LDRD) effort performed fundamental Research and Development (R&D) to develop a robust radar processing algorithm capable of assessing the difference between an Unmanned Aerial System (UAS) and a biological target such as a bird, based on mathematics applied to the polarized radar returns of the target object, alone. The current threats of using such a UAS as a delivery platform for a host of destructive components is a major concern for the protection of various assets. Most recently, on 14th Sept. 2019, dozens of suicide or kamikaze drones (UAV-X) coordinated an attack on two Saudi oil facilities that demonstrated the potential to disrupt global oil supplies. While radar-based UAS detection systems can detect UAS at ranges greater than 1-km, the issues of excessive Nuisance/False Alarm Rates (NAR/FAR) from natural sources (birds in particular) has not been sufficiently addressed. In this effort we describe and utilize the Adaptive Polarization Difference Imaging-based (APDI) algorithms for the detection and automatic non-visual assessment of Unmanned Aerial System applications. Originally developed for optical imaging and sensing of polarization information in nature, the algorithms developed here are modified to serve for the target detection purposes in counter-UAS (cUAS) environments. We exploit the polarization statistics of the observing scene for detection and identification of changes within the scene and assess from these changes for UAS/bird classifications. Several cases are considered from independent data sources, including numerically generated data, anechoic chamber data as well as experimental radar data, to show the applicability of the techniques developed here. The methods developed in this effort are designed to be used in cUAS setups but have shown promise for a multitude of other radar-based classification uses as well.

47 OTHER INSTRUMENTATION↗

Rapid Aero Modeling for Urban Air Mobility Aircraft in Computational Experiments

Rapid Aero Modeling (RAM) applied to computational testing, RAM-C, is an approach to efficiently and automatically obtain aerodynamic models during computational investigations. RAM-C is designed to estimate models appropriate for flight dynamics studies and simulations. The approach responds to a demand for experimental efficiency and model fidelity that has increased with growing aircraft complexity and aerodynamic nonlinearities associated with hybrid and electric vertical takeoff and landing (eVTOL) aircraft. In an Urban Air Mobility (UAM) transportation system, it is expected that aircraft will embrace many features from both airplanes and rotorcraft. These vehicles present many more factors than conventional aircraft which can lead to increased computational costs and missed key factor interactions when applying traditional testing and modeling methods. RAM-C provides feedback loops around computational codes to rapidly guide testing toward aerodynamic models meeting user-defined fidelity goals. It combines and extends concepts from design of experiment theory and aircraft system identification theory that allow the user the freedom to choose, in advance of the test, a specific level of fidelity in terms of prediction error. RAM-C only collects enough data required to meet the user-specified prediction error requirements thus saving computational time and resources. The overall achievable fidelity of the final model also depends on the accuracy of the test facility, or in this case, the computational modeling approach. Previous studies to support development of the RAM-T process were conducted in wind tunnel tests to assess potential metrics, algorithms, and procedures. This paper presents results from the next steps taken and tests conducted for the development of RAM-C technology and highlights some of the unique features of RAM applied eVTOL configurations in a computational study.

Aerodynamics↗

Development of In-Situation Radioactivity Inspection System for Food Materials

The impacts on the ocean of releases of radionuclides from the Fukushima nuclear power plants remain unclear. Korean people worry about radioactive contamination of Japanese and Korean sea products. Radioactive contamination of processed foodstuffs, livestock, sea products, farm products imported from Japan and fishes caught in coastal oceans of Korea has become an important social issue. Recently, there are also needs of inspection system for monitoring of public meals such like school feedings of kindergarten, elementary/middle/high school and university. Radioactivity inspections of food materials have been executed manually with portable measuring instruments or at labs using their samples. But, it's very important the radioactivity inspection should be performed at the field of feeding facilities. To protect the health of people from radioactivity contained in Japanese marine products imported to Korea, a system to inspect radioactivity in real time has been developed. The system is to measure the radioactivity level of farm and marine products and public meals continuously and automatically at inspection sites of an agency checking radiation of imported foodstuffs or school. The performance test of NaI(Tl) detector was examined using the quantified Cs-137 source 10 Bq/kg, 30 Bq/kg, 50 Bq/kg, 300 Bq/kg and 900 Bq/kg at Korea Research Institute of Standards and Science(KRISS). Source was put in a box and radioactivity was measured in the middle of the box. First of all, Background was measured and calibration was performed using the Cs-137 300 Bq and Ba-133 3700 Bq for 60 minutes. After setting the background and calibration data, tests of the Cs-137 10, 30, 50, 300, 900 Bq/kg were executed for 10 minutes. A peak-shaped graph is shown at the location of 662 KeV (80∼100 channel). This is due to the gamma radiation energy with 662 KeV emitted by the Cs-137. Because through KRISS examination, the MDA (minimum detectable activity) is about 23 Bq/kg, it is reasonable Cs-137 10 Bq/kg cannot be measured. And in cases of Cs-137 300 Bq/kg and 900 Bq/kg, there are some peak movement on the graph. It can be adjusted by controlling gain or high voltage. The examination was identified through the performance test (Cs-137 10, 30, 50, 300, 900 Bq/kg) at KRISS. In order to increase the measurement efficiency of Cs-137 and the system performance, database will be built up based on radioactivity measurement results from 10 to 300 Bq/kg with the unit 10. Thus, Cs-137 concentration of food materials can be identified below the maximum permissible concentration of 100 Bq/kg on a basis of the spectrum characteristic of Cs-137. Also, anxiety about radioactive contamination of foods after the Fukushima nuclear accident will be eased and trust of the radioactive inspection is expected definitely. (authors)

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Generation of brain pseudo-CTs using an undersampled, single-acquisition UTE-mDixon pulse sequence and unsupervised clustering

Purpose: MR-based pseudo-CT has an important role in MR-based radiation therapy planning and PET attenuation correction. The purpose of this study is to establish a clinically feasible approach, including image acquisition, correction, and CT formation, for pseudo-CT generation of the brain using a single-acquisition, undersampled ultrashort echo time (UTE)-mDixon pulse sequence. Methods: Nine patients were recruited for this study. For each patient, a 190-s, undersampled, single acquisition UTE-mDixon sequence of the brain was acquired (TE = 0.1, 1.5, and 2.8 ms). A novel method of retrospective trajectory correction of the free induction decay (FID) signal was performed based on point-spread functions of three external MR markers. Two-point Dixon images were reconstructed using the first and second echo data (TE = 1.5 and 2.8 ms). R2{sup ∗} images (1/T2{sup ∗}) were then estimated and were used to provide bone information. Three image features, i.e., Dixon-fat, Dixon-water, and R2{sup ∗}, were used for unsupervised clustering. Five tissue clusters, i.e., air, brain, fat, fluid, and bone, were estimated using the fuzzy c-means (FCM) algorithm. A two-step, automatic tissue-assignment approach was proposed and designed according to the prior information of the given feature space. Pseudo-CTs were generated by a voxelwise linear combination of the membership functions of the FCM. A low-dose CT was acquired for each patient and was used as the gold standard for comparison. Results: The contrast and sharpness of the FID images were improved after trajectory correction was applied. The mean of the estimated trajectory delay was 0.774 μs (max: 1.350 μs; min: 0.180 μs). The FCM-estimated centroids of different tissue types showed a distinguishable pattern for different tissues, and significant differences were found between the centroid locations of different tissue types. Pseudo-CT can provide additional skull detail and has low bias and absolute error of estimated CT numbers of voxels (−22 ± 29 HU and 130 ± 16 HU) when compared to low-dose CT. Conclusions: The MR features generated by the proposed acquisition, correction, and processing methods may provide representative clustering information and could thus be used for clinical pseudo-CT generation.

60 APPLIED LIFE SCIENCES↗

An Improved Boosting to Amplify Signal with Isobaric Labeling (iBASIL) Strategy for Precise Quantitative Single-cell Proteomics

Mass spectrometry (MS)-based proteomics has great potential for overcoming the limitations of antibody-based immunoassays for antibody-independent, comprehensive, and quantitative proteomic analysis of single cells. Indeed, recent advances in nanoscale sample preparation have enabled effective processing of single cells. In particular, the concept of using boosting/carrier channels in isobaric labeling to increase the sensitivity in MS detection has also been increasingly used for quantitative proteomic analysis of small-sized samples including single cells. However, the full potential of such boosting/carrier approaches has not been significantly explored, nor has the resulting quantitation quality been carefully evaluated. Herein, we have further evaluated and optimized our recent boosting to amplify signal with isobaric labeling (BASIL) approach, originally developed for quantifying phosphorylation in small number of cells, for highly effective analysis of proteins in single cells. This improved BASIL (iBASIL) approach enables reliable quantitative single-cell proteomics analysis with greater proteome coverage by carefully controlling the boosting-to-sample ratio (e.g. in general <100×) and optimizing MS automatic gain control (AGC) and ion injection time settings in MS/MS analysis (e.g. 5E5 and 300 ms, respectively, which is significantly higher than that used in typical bulk analysis). By coupling with a nanodroplet-based single cell preparation (nanoPOTS) platform, iBASIL enabled identification of ~2500 proteins and precise quantification of ~1500 proteins in the analysis of 104 FACS-isolated single cells, with the resulting protein profiles robustly clustering the cells from three different acute myeloid leukemia cell lines. This study highlights the importance of carefully evaluating and optimizing the boosting ratios and MS data acquisition conditions for achieving robust, comprehensive proteomic analysis of single cells.

59 BASIC BIOLOGICAL SCIENCES↗

Towards district scale flood simulations using conventional and anisotropic porosity shallow water models with high-resolution topographic information

Current topographic survey technology provides high-resolution (HR) datasets for urban environments. Incorporating this HR information in models aiming to provide flood risk assessment is desirable because the flood wave propagation is depending on the urban topographic features, i.e. buildings, bridges and street networks. Conceptual, numerical and practical challenges arise from the application of shallow water models to HR urban flood modeling. For example, numerical challenges are occurrence of wet-dry fronts, geometric discontinuities in the urban environment and discontinuous solutions, i.e. shock waves. These challenges can be overcome by using a Godunov-type scheme. However, the computational cost of this type of schemes is high, such that HR two-dimensional shallow water simulations with practical relevance have to be run on supercomputers. The porous shallow water model is an alternative approach that aims to reduce computational cost by using a coarse resolution and accounting for unresolved processes by means of the porosity terms. Usually, a speedup between two and three orders of magnitude in comparison to HR simulations can be obtained. This study presents preliminary results of a practical test case concerning pluvial flooding in a district of the city of Nice, France, caused by the intense rainfall event on October 3rd, 2015. HR topography data set on a 1 m resolution is available for the district, whereby street features of infra-metric dimensions have been included. A reference solution is calculated by a HR shallow water model on a 1 m by 1 m structured computational grid. The porous shallow water model is run on a 10 m by 10 m grid and the influence of the drag source term is studied. The model calculations show a large deviation, which is caused by the poor meshing strategy of the porous shallow water (AP) model. The study also summarizes practical challenges that arise during the application of the AP and HR models to a large urban catchment. The main difficulty is to obtain a good mesh. In smaller scale investigations, the mesh is currently constructed by hand such that the cell edges align with buildings. This approach is not feasible for large scale urban catchments with a large number of buildings. Future steps that have to be taken, such as a strategy for automatic mesh generation, are reported on.

42 ENGINEERING↗

Post-Minkowskian effective field theory for conservative binary dynamics

We develop an Effective Field Theory (EFT) formalism to solve for the conservative dynamics of binary systems in gravity via Post-Minkowskian (PM) scattering data. Our framework combines a systematic EFT approach to compute the deflection angle in the PM expansion, together with the ‘Boundary-to-Bound’ (B2B) dictionary introduced. Due to the nature of scattering processes, a remarkable reduction of complexity occurs both in the number of Feynman diagrams and type of integrals, compared to a direct EFT computation of the potential in a PM scheme. We provide two illustrative examples. Firstly, we compute all the conservative gravitational observables for bound orbits to 2PM, which follow from only one topology beyond leading order. The results agree with those, obtained through the ‘impetus formula’ applied to the classical limit of the one loop amplitude. For the sake of comparison we reconstruct the conservative Hamiltonian to 2PM order, which is equivalent to the one derived from a matching calculation. Secondly, we compute the scattering angle due to tidal effects from the electric- and magnetic-type Love numbers at leading PM order. Using the B2B dictionary we then obtain the tidal contribution to the periastron advance. We also construct a Hamiltonian including tidal effects at leading PM order. Although relying on (relativistic) Feynman diagrams, the EFT formalism developed here does not involve taking the classical limit of a quantum amplitude, neither integrals with internal massive fields, nor additional matching calculations, nor spurious (‘super-classical’) infrared singularities. By construction, the EFT approach can be automatized to all PM orders.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Coherent Detection of High-Rate Optical PPM Signals

A method of coherent detection of high-rate pulse-position modulation (PPM) on a received laser beam has been conceived as a means of reducing the deleterious effects of noise and atmospheric turbulence in free-space optical communication using focal-plane detector array technologies. In comparison with a receiver based on direct detection of the intensity modulation of a PPM signal, a receiver based on the present method of coherent detection performs well at much higher background levels. In principle, the coherent-detection receiver can exhibit quantum-limited performance despite atmospheric turbulence. The key components of such a receiver include standard receiver optics, a laser that serves as a local oscillator, a focal-plane array of photodetectors, and a signal-processing and data-acquisition assembly needed to sample the focal-plane fields and reconstruct the pulsed signal prior to detection. The received PPM-modulated laser beam and the local-oscillator beam are focused onto the photodetector array, where they are mixed in the detection process. The two lasers are of the same or nearly the same frequency. If the two lasers are of different frequencies, then the coherent detection process is characterized as heterodyne and, using traditional heterodyne-detection terminology, the difference between the two laser frequencies is denoted the intermediate frequency (IF). If the two laser beams are of the same frequency and remain aligned in phase, then the coherent detection process is characterized as homodyne (essentially, heterodyne detection at zero IF). As a result of the inherent squaring operation of each photodetector, the output current includes an IF component that contains the signal modulation. The amplitude of the IF component is proportional to the product of the local-oscillator signal amplitude and the PPM signal amplitude. Hence, by using a sufficiently strong local-oscillator signal, one can make the PPM-modulated IF signal strong enough to overcome thermal noise in the receiver circuits: this is what makes it possible to achieve near-quantum-limited detection in the presence of strong background. Following quantum-limited coherent detection, the outputs of the individual photodetectors are automatically aligned in phase by use of one or more adaptive array compensation algorithms [e.g., the least-mean-square (LMS) algorithm]. Then the outputs are combined and the resulting signal is processed to extract the high-rate information, as though the PPM signal were received by a single photodetector. In a continuing series of experiments to test this method (see Fig. 1), the local oscillator has a wavelength of 1,064 nm, and another laser is used as a signal transmitter at a slightly different wavelength to establish an IF of about 6 MHz. There are 16 photodetectors in a 4 4 focal-plane array; the detector outputs are digitized at a sampling rate of 25 MHz, and the signals in digital form are combined by use of the LMS algorithm. Convergence of the adaptive combining algorithm in the presence of simulated atmospheric turbulence for optical PPM signals has already been demonstrated in the laboratory; the combined output is shown in Fig. 2(a), and Fig. 2(b) shows the behavior of the phase of the combining weights as a function of time (or samples). We observe that the phase of the weights has a sawtooth shape due to the continuously changing phase in the down-converted output, which is not exactly at zero frequency. Detailed performance analysis of this coherent free-space optical communication system in the presence of simulated atmospheric turbulence is currently under way.

Vilnrotter, Victor↗