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At least 1,657 records · Page 92
All sourcesNASA NTRSDOE OSTI
DOE OSTI2021

Discovery and analysis of low-surface-brightness galaxies in the environment of NGC 1052

The environment of NGC 1052 has recently attracted much attention because of the presence of low-surface-brightness galaxies (LSBGs) with apparently “exotic” properties, making it a region of high interest for the detection of new objects. Here, we used public deep photometric data from the Dark Energy Camera Legacy Survey to carry out a comprehensive search for LSBGs over a wide region of 6 × 6 degrees, equivalent to 2 × 2 Mpc at the distance of NGC 1052. We detected 42 LSBGs with r eff > 5 arcsec and μ g (0) > 24 mag arcsec -2 , of which 20 are previously undetected objects. Among all the newly detected objects, RCP 32 stands out with extreme properties: r eff = 23.0 arcsec and $\langle$μ g $\rangle$ eff = 28.6 mag arcsec -2 . This makes RCP 32 one of the lowest surface brightness galaxies ever detected through integrated photometry, located at just 10 arcmin from the extensively studied NGC 1052-DF2. We explored the presence of globular clusters (GCs) in the LSBGs. We marginally detected a GC system in RCP 32, and argue that this LSBG is of great interest for follow-up observations given its extremely low baryon density. After analyzing the distribution of galaxies with available spectroscopy, we identified a large-scale structure of approximately 1 Mpc that is well isolated in redshift space and centered on NGC 1052. The spatial correlation analysis between the LSBGs and this large-scale structure suggests their association. However, when exploring the distribution of effective radius, we find an overpopulation of large LSBGs (r eff > 15 arcsec) located close to the line of sight of NGC 1052. We argue that this is suggestive of a substructure with similar radial velocity in sight projection, but at a closer distance, to which some of these apparently larger LSBGs could be associated. However, possible effects derived from tidal interactions are worthy of further study. Our work expands the catalog of LSBGs with new interesting objects and provides a detailed environmental context for the study of LSBGs in this region.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2023

eROSITA Final Equatorial-Depth Survey (eFEDS) eFEDS X-ray view of WERGS radio galaxies selected by the Subaru/HSC and VLA/FIRST survey

We constructed the eROSITA X-ray catalog of radio galaxies discovered by the WERGS survey, made by cross-matching the wide area Subaru/Hyper Suprime-Cam (HSC) optical survey and VLA/FIRST 1.4 GHz radio survey. We report finding 393 eROSITA detected radio galaxies in the 0.5-2 keV band in the eFEDS field covering 140 deg 2 . Thanks to the wide and medium depth eFEDS X-ray survey down to f 0.5 - 2 keV = 6.5 × 10 -15 erg s -1 cm -2 , the sample contains the rare and most X-ray luminous radio galaxies above the knee of the X-ray luminosity function, spanning 44 < log(L 0.5-2 keV (abs,corr) /erg s -1 ) < 46.5 at 1 < z < 4. The sample also contains the sources around and below the knee for the sources 41 < log(L 0.5-2 keV (abs,corr) /erg s -1 ) < 45 at z < 1. Based on the X-ray properties obtained by the spectral fitting, 37 sources show obscured active galactic nucleus (AGN) signatures with log(N H /cm -2 ) > 22. These obscured and radio AGN reside in 0.4 < z < 3.2, indicating that they are obscured counterparts of the radio-loud quasar, which were missed in the previous optical quasar surveys. By combining radio and X-ray luminosities, we also investigated the jet production efficiency η jet = η rad P jet /L AGN,bol by utilizing the jet power of P jet . We find that there are 14 sources with extremely high jet production efficiency at η jet ≈ 1. This high η jet value might be a result of the decreased radiation efficiency of η rad < 0.1, due to the low accretion rate for those sources, and/or of the boosting due to the decline of L AGN,bol by a factor of 10-100 by keeping P jet constant in the previous Myr, indicating the experience of the AGN feedback. Finally, inferring the BH masses from the stellar mass, we find that X-ray luminous sources show the excess of the radio emission with respect to the value estimated from the fundamental plane. This radio emission excess cannot be explained by the Doppler boosting alone, and therefore the disk–jet connection of X-ray luminous eFEDS-WERGS is fundamentally different from the conventional fundamental plane which mainly covers the low-accretion regime.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2023

Discovery of the lensed quasar eRASS1 J050129.5–073309 with SRG/eROSITA and Gaia

We report the discovery and spectroscopic identification of the bright doubly lensed quasar eRASS1 J050129.5–073309 at redshift z = 2.47, selected from the first all-sky survey of the Spectrum Roentgen Gamma (SRG) eROSITA telescope and the Gaia EDR3 catalog. We systematically searched for extragalactic sources with eROSITA X-ray positions that have multiple Gaia counterparts, and we have started spectroscopic follow-up of the most promising candidates using long-slit spectroscopy with NTT/EFOSC2 to confirm the lens nature. The two images are separated by 2.7", and their average Gaia g-band magnitudes are 16.95 and 17.33. Legacy Survey DR10 imaging and image modeling reveal both the lensing galaxy and tentatively the lensed image of the quasar host galaxy. Archival optical light curves show evidence of a variability time delay, with the fainter component lagging the brighter by about 100 days. The brightness of the fainter image has also decreased by about one magnitude since 2019. This dimming was still obvious at the time of the spectroscopic observations and is probably caused by microlensing. The optical spectroscopic follow-up obtained from NTT/EFOSC2 and the evidence provided by the imaging and timing analysis allow us to confirm the lensed nature of eRASS1 J050129.5–073309.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2023

AutoSourceID-Classifier: Star-galaxy classification using a convolutional neural network with spatial information

Aims.Traditional star-galaxy classification techniques often rely on feature estimation from catalogs, a process susceptible to introducing inaccuracies, thereby potentially jeopardizing the classification’s reliability. Certain galaxies, especially those not manifesting as extended sources, can be misclassified when their shape parameters and flux solely drive the inference. We aim to create a robust and accurate classification network for identifying stars and galaxies directly from astronomical images. Methods.The AutoSourceID-Classifier (ASID-C) algorithm developed for this work uses 32x32 pixel single filter band source cutouts generated by the previously developed AutoSourceID-Light (ASID-L) code. By leveraging convolutional neural networks (CNN) and additional information about the source position within the full-field image, ASID-C aims to accurately classify all stars and galaxies within a survey. Subsequently, we employed a modified Platt scaling calibration for the output of the CNN, ensuring that the derived probabilities were effectively calibrated, delivering precise and reliable results. Results.We show that ASID-C, trained on MeerLICHT telescope images and using the Dark Energy Camera Legacy Survey (DECaLS) morphological classification, is a robust classifier and outperforms similar codes such as SourceExtractor. To facilitate a rigorous comparison, we also trained an eXtreme Gradient Boosting (XGBoost) model on tabular features extracted by SourceExtractor. While this XGBoost model approaches ASID-C in performance metrics, it does not offer the computational efficiency and reduced error propagation inherent in ASID-C’s direct image-based classification approach. ASID-C excels in low signal-to-noise ratio and crowded scenarios, potentially aiding in transient host identification and advancing deep-sky astronomy.

Astronomy & Astrophysics↗
DOE OSTI2024

A road map to cosmological parameter analysis with third-order shear statistics: III. Efficient estimation of third-order shear correlation functions and an application to the KiDS-1000 data

Context. Third-order lensing statistics contain a wealth of cosmological information that is not captured by second-order statistics. However, the computational effort it takes to estimate such statistics in forthcoming stage IV surveys is prohibitively expensive. Aims. We derive and validate an efficient estimation procedure for the three-point correlation function (3PCF) of polar fields such as weak lensing shear. We then use our approach to measure the shear 3PCF and the third-order aperture mass statistics on the KiDS-1000 survey. Methods We constructed an efficient estimator for third-order shear statistics that builds on the multipole decomposition of the 3PCF. We then validated our estimator on mock ellipticity catalogs obtained from N -body simulations. Finally, we applied our estimator to the KiDS-1000 data and presented a measurement of the third-order aperture statistics in a tomographic setup. Results. Our estimator provides a speedup of a factor of ∼100–1000 compared to the state-of-the-art estimation procedures. It is also able to provide accurate measurements for squeezed and folded triangle configurations without additional computational effort. We report a significant detection of tomographic third-order aperture mass statistics in the KiDS-1000 data (S/N = 6.69). Conclusions. Our estimator will make it computationally feasible to measure third-order shear statistics in forthcoming stage IV surveys. Furthermore, it can be used to construct empirical covariance matrices for such statistics.

Astronomy & Astrophysics↗
DOE OSTI2024

MHONGOOSE: A MeerKAT nearby galaxy H I survey

The MHONGOOSE (MeerKAT H IObservations of Nearby Galactic Objects: Observing Southern Emitters) survey maps the distribution and kinematics of the neutral atomic hydrogen (H I) gas in and around 30 nearby star-forming spiral and dwarf galaxies to extremely low H Icolumn densities. The H Icolumn density sensitivity (3σover 16 km s −1 ) ranges from ∼5 × 10 17 cm −2 at 90″ resolution to ∼4 × 10 19 cm −2 at the highest resolution of 7″. The H Imass sensitivity (3σover 50 km s −1 ) is ∼5.5 × 10 5 M ⊙ at a distance of 10 Mpc (the median distance of the sample galaxies). The velocity resolution of the data is 1.4 km s −1 . One of the main science goals of the survey is the detection of cold accreting gas in the outskirts of the sample galaxies. The sample was selected to cover a range in H Imasses from 10 7 M ⊙ to almost 10 11 M ⊙ in order to optimally sample possible accretion scenarios and environments. The distance to the sample galaxies ranges from 3 to 23 Mpc. In this paper, we present the sample selection, survey design, and observation and reduction procedures. We compared the integrated H Ifluxes based on the MeerKAT data with those derived from single-dish measurement and find good agreement, indicating that our MeerKAT observations are recovering all flux. We present H Imoment maps of the entire sample based on the first ten percent of the survey data, and find that a comparison of the zeroth- and second-moment values shows a clear separation in the physical properties of the H Ibetween areas with star formation and areas without related to the formation of a cold neutral medium. Finally, we give an overview of the H I-detected companion and satellite galaxies in the 30 fields, five of which have not previously been cataloged. We find a clear relation between the number of companion galaxies and the mass of the main target galaxy.

Astronomy & Astrophysics↗
DOE OSTI2024

The SRG/eROSITA All-Sky Survey: Dark Energy Survey year 3 weak gravitational lensing by eRASS1 selected galaxy clusters

Context. Number counts of galaxy clusters across redshift are a powerful cosmological probe if a precise and accurate reconstruction of the underlying mass distribution is performed – a challenge called mass calibration. With the advent of wide and deep photometric surveys, weak gravitational lensing (WL) by clusters has become the method of choice for this measurement. Aims. We measured and validated the WL signature in the shape of galaxies observed in the first three years of the Dark Energy Survey (DES Y3) caused by galaxy clusters and groups selected in the first all-sky survey performed by SRG (Spectrum Roentgen Gamma)/eROSITA (eRASS1). These data were then used to determine the scaling between the X-ray photon count rate of the clusters and their halo mass and redshift. Methods. We empirically determined the degree of cluster member contamination in our background source sample. The individual cluster shear profiles were then analyzed with a Bayesian population model that self-consistently accounts for the lens sample selection and contamination and includes marginalization over a host of instrumental and astrophysical systematics. To quantify the accuracy of the mass extraction of that model, we performed mass measurements on mock cluster catalogs with realistic synthetic shear profiles. This allowed us to establish that hydrodynamical modeling uncertainties at low lens redshifts (z < 0.6) are the dominant systematic limitation. At high lens redshift, the uncertainties of the sources’ photometric redshift calibration dominate. Results. With regard to the X-ray count rate to halo mass relation, we determined its amplitude, its mass trend, the redshift evolution of the mass trend, the deviation from self-similar redshift evolution, and the intrinsic scatter around this relation. Conclusions. The mass calibration analysis performed here sets the stage for a joint analysis with the number counts of eRASS1 clusters to constrain a host of cosmological parameters. We demonstrate that WL mass calibration of galaxy clusters can be performed successfully with source galaxies whose calibration was performed primarily for cosmic shear experiments, opening the way for the cluster cosmological exploitation of future optical and NIR surveys like Euclid and LSST.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2024

Cepheids with giant companions: II. Spectroscopic confirmation of nine new double-lined binary systems composed of two Cepheids

Context.Binary Cepheids with giant companions are crucial for studying the physical properties of Cepheid variables, in particular providing the best means to measure their masses. Systems composed of two Cepheids are even more important, but to date, only one such system has been identified, in the Large Magellanic Cloud (LMC). Aims.Our current aim is to increase the number of these systems known tenfold and to provide their basic characteristics. The final goal is to obtain the physical properties of the component Cepheids, including their masses and radii, and to learn about their evolution in the multiple systems, also revealing their origin. Methods.We started a spectroscopic monitoring campaign of nine unresolved pairs of Cepheids from the OGLE catalog to check if they are gravitationally bound. Two of these so-called double Cepheids are located in the LMC, five are in the Small Magellanic Cloud (SMC), and two are in the Milky Way (MW). Results.We report a spectroscopic detection of the binarity of all nine of these double Cepheids with orbital periods ranging from 2 to 18 years. This increases the number of known binary double (BIND) Cepheids from 1 to 10 and triples the number of all confirmed double-lined binary (SB2) Cepheids. For five BIND Cepheids, the disentangled pulsational light curves of the components show anti-correlated phase shifts due to orbital motion. We show the first empirical evidence that typical period–luminosity relations (PLRs) are rather binary Cepheid PLRs, as they include light of the companion. Conclusions.The statistics of pulsation period ratios of BIND Cepheids do not agree with those expected for pairs of Cepheids of the same age. These ratios together with the determined mass ratios far from unity suggest a merger origin of at least one component for about half of the systems. The SMC and MW objects are the first found in SB2 systems composed of giants in their host galaxies. The Milky Way BIND Cepheids are also the closest such systems, being located at about 11 and 26 kpc.

Astronomy & Astrophysics↗
DOE OSTI2025

The imprint of cosmic voids from the DESI Legacy Survey DR9 Luminous Red Galaxies in the Planck 2018 lensing map through spectroscopically calibrated mocks

The cross-correlation of cosmic voids with the lensing convergence (κ) map of the Cosmic Microwave Background (CMB) fluctuations provides a powerful tool to refine our understanding of the current cosmological model. However, several studies have reported a moderate tension (up to ∼2σ) between the lensing imprint of cosmic voids on the observed CMB and the ΛCDM signal predicted by simulations. To address this “lensing-is-low” tension and to obtain new, precise measurements of the signal, we exploit the large DESI Legacy Survey Luminous Red Galaxy (LRG) data set, covering approximately 19 500 deg 2 of the sky and including about 10 million LRGs at z < 1.05. Our ΛCDM template was created using the Buzzard mocks, which we specifically calibrated to match the clustering properties of the observed galaxy sample by exploiting more than one million DESI spectra. We identified our catalogs of 3D voids in the range 0.35 < z < 0.95 and cross-correlated them through a stacking methodology, dividing the sample into bins according to the redshift and λv values of the voids. For the full void sample, we report a 14σ detection of the lensing signal, with A κ = 1.016 ± 0.054, which increases to 17σ when considering the void-in-void (A κ = 0.944 ± 0.064) and the void-in-cloud (A κ = 0.975 ± 0.060) populations individually, the highest detection significance for studies of this kind. We observe a full agreement between observations and ΛCDM mocks across all redshift bins, sky regions, and void populations considered. In addition to these findings, our analysis highlights the importance of accurately matching sparseness and redshift error distributions between mocks and observations, as well as the role of λ v in enhancing the signal-to-noise ratio through void population discrimination.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2025

Weak lensing mass-richness relation of redMaPPer clusters in LSST DESC DC2 simulations

Cluster scaling relations are key ingredients in cluster abundance-based cosmological studies. In optical cluster cosmology, where clusters are detected through their richness, cluster-weak gravitational lensing has proven to be a powerful tool to constrain the cluster mass-richness relation. This work is conducted as part of the Dark Energy Science Collaboration (DESC), which aims to analyze the Legacy Survey of Space and Time (LSST) of the Vera C. Rubin Observatory, starting in 2026. Cluster properties inferred from weak lensing, such as mass, suffer from several sources of bias. In this paper, we aim to test the impact of modeling choices and observational systematics in cluster lensing on the inference of the mass-richness relation. We constrained the mass-richness relation of 3600 clusters detected by the redMaPPer algorithm in the cosmoDC2 extragalactic mock catalog of the LSST DESC DC2 simulation, covering 440 deg 2 , using number count measurements and either stacked weak lensing profiles or mean cluster masses in several intervals of richness (20 ≤ λ ≤ 200) and redshift (0.2 ≤ z ≤ 1). We provide the first constraints on the redMaPPer cluster mass-richness relation detected in cosmoDC2. We find that for an LSST-like source galaxy density, our constraints are robust to changes in the concentration-mass relation, as well as the dark matter density profile modeling choices, when source redshifts and shapes are perfectly known. We find that photometric redshift uncertainties can introduce bias at the 1σ level, which could be mitigated by an overall correction factor fitted jointly with the scaling parameters. We find that including positive shear-richness covariance in the fit shifts the results by up to 0.5σ. Our constraints also offer a fair comparison to a fiducial mass-richness relation, obtained from matching cosmoDC2 halo masses to redMaPPer-detected cluster richness results.

galaxy clusters↗
DOE OSTI2025

Selection function of clusters in Dark Energy Survey year 3 data from cross-matching with South Pole Telescope detections

Context. Galaxy clusters selected based on overdensities of galaxies in photometric surveys provide the largest cluster samples. However, modeling the selection function of such samples is complicated by noncluster members projected along the line of sight (projection effects) and the potential detection of unvirialized objects (contamination). Aims. We empirically constrained the magnitude of these effects by cross-matching galaxy clusters selected in the Dark Energy Survey data with the redMaPPer algorithm with significant detections in three South Pole Telescope surveys (SZ, pol-ECS, pol-500d). Methods. For matched clusters, we augmented the redMaPPer catalog with the SPT detection significance. For unmatched objects we used the SPT detection threshold as an upper limit on the SZe signature. Using a Bayesian population model applied to the collected multiwavelength data, we explored various physically motivated models to describe the relationship between observed richness and halo mass. Results. Our analysis reveals a clear preference for models with an additional skewed scatter component associated with projection effects over a purely log-normal scatter model. We rule out significant contamination by unvirialized objects at the high-richness end of the sample. While dedicated simulations offer a well-fitting calibration of projection effects, our findings suggest the presence of redshift-dependent trends that these simulations may not have captured. Our findings highlight that modeling the selection function of optically detected clusters remains a complicated challenge that requires a combination of simulation and data-driven approaches.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2025

Label-based Virtual Directories In dCache

Traditional filesystems organize data in directories. These directories are typically a collection of files whose grouping is based on a single criterion, e.g., the starting date of an experiment, experiment name, beamline ID, measurement device, or instrument. However, each file in a directory can belong to several logical groups, such as a special event type, experiment condition, or a part of a selected dataset. dCache is a storage system developed to store large amounts of scientific data, used by many HEP and Photon Science experiments. With recent developments in dCache, we have introduced a concept of file tagging, which dynamically groups files with the same label into virtual directories. The file labels can be added, removed, renamed, and deleted through the admin interface or via REST API. The files in virtual directories are exposed through all protocols supported by dCache. This contribution will describe the details of the implementation for file tagging in dCache and present our future development plans on automatic metadata extractions, a feature that will significantly simplify data management. Additionally, we are exploring the future use of virtual directories as a way to translate scientific data catalogs into filesystem views for direct data analysis.

Sahakyan, Marina [DESY]↗
DOE OSTI2020

A description of structured waves in shock compressed particulate composites

Dynamic compression of composite materials is of scientific interest because the mechanical mismatch between internal phases challenges continuum theories. Typical assumptions about steady wave propagation and quasi-instantaneous state changes require reexamination along with the need for time-dependent models. To that end, data and models are presented here for the shock compression of an idealized particulate composite. To serve as a generic representative of this material class, a polymer matrix was filled with tungsten particles, ranging from 1 to 50 vol. %. This creates a simple microstructure containing randomly scattered particles with an extreme impedance mismatch to the binding matrix. These materials were parallel plate impact loaded by Al flyers traveling at 1.8–5.0 km/s. Velocimetry provided records of the equilibrium state and the compression wave structure for each case with trends quantified by an empirical fit. The same quantities were also studied as a function of the wave's propagation distance. A homogenized viscoelastic model then made it possible to progress from cataloging trends to making predictions. Starting from a Mie–Gruneisen equation of state, additional time varying terms were added to capture the transient response. After calibration, accurate predictions of the steady wave structure were possible.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2021

Diverse simulations of time-resolved photoluminescence in thin-film solar cells: A SnO 2 /CdSe y Te 1-y case study

Time-resolved photoluminescence (TRPL) is widely used to measure carrier lifetime in thin-film solar cell absorbers. However, the injection dependence of data and frequent non-exponential decay shapes complicate the interpretation. Here, we develop a numerical model to simulate injection-dependent TRPL measurements in a SnO 2 /CdSe y Te 1-y case study solar cell structure, considering parameters of interest to researchers in industry and academia. Previous simulations have shown that, in low injection, excess electrons and holes injected by the laser pulse are rapidly separated in the electric field formed by the pn junction. As a result, at early times, the PL signal can decay faster than the Shockley-Read-Hall lifetime in the absorber bulk (t_bulk). Prior simulations have shown that the charge stored in the junction can slowly leak out to affect decays at late times. However, it has not been clear if and to what degree charge storage can affect the slopes extracted from TRPL decays - t_2 - commonly cited as the TRPL-measured lifetime. Here, we show that charge storage can, in some cases, result in t_2 values that substantially overestimate t_bulk. Previous simulations indicate that high injection conditions can screen the junction field and minimize charge separation. Here, we show that continued injection increases can drive down t_2 below t_bulk as radiative recombination becomes dominant. We catalog charge storage and radiative recombination impacts for a diverse set of material parameters and compare results to double-heterostructure models.

CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSICS,S↗
DOE OSTI2025

Prediction of vacancy defect diffusion paths in high entropy alloys via machine learning on molecular dynamics data

Identifying the diffusion path of point defects is a critical step in understanding their evolution and the mechanisms of related phenomena. Defect diffusion occurs at small length and time scales, with impacts on material properties that may continue to evolve over ns to μs, ms, and the continuum scale (s, min, etc., and cm, m, etc.). The time scale accessible to molecular dynamics (MD) simulations is limited by small step sizes, typically in the fs range. Thus, surrogate models of MD simulations through machine learning (ML)-based algorithms are of great interest, especially for complex systems such as high entropy alloys (HEAs). In this work, dynamics governing vacancy migration in HEA were approximated with graph convolutional network (GCN) models as ansatzes for kinetic Monte Carlo (KMC) rate catalogs. Network design considered that diffusion in crystalline solids generally depends on interactions between defects and their immediate neighbor atoms. Graphs represented the vacancy surroundings, MD-generated trajectories provided training and comparison datasets, and unsupervised GCN models approximated interatomic dynamics governing vacancy migration in HEAs as ansatzes for KMC. A proof-of-concept model trained on MD data for the Fe, Ni, Cr, Co, and Cu HEA environment was used with two different neighbor interactions to assess the feasibility of training a GCN to predict vacancy defect transition rates in the HEA environment. The resulting setup rapidly generated MD-formatted synthetic trajectories based on dynamics learned from the MD training set, with a time acceleration of roughly two orders of magnitude and a similar diffusion coefficient to MD observations. Additionally, Nudged Elastic Band (NEB) calculations were performed on randomly generated FeNiCrCoCu HEA structures to determine vacancy migration barriers across nearest-neighbor sites. Transition probabilities for each jump, categorized by atomic type, were extracted from these calculations. NEB-based and GCN-based approaches led to similar outcomes.

Reimer, C↗
DOE OSTI2025

Simple analytic fusion hot spot models for fusion reaction history

The measured fusion reaction history is a combination of the temporal evolution of the fusion hot spot temperature, mass, and volume. Depending on the mechanism of evolution in inertial confinement fusion implosions—shocks, compression, convergence, mass ablation, ignition—the evolution of the reaction history varies. Here, we derive and catalog a set of simplified inertial confinement fusion hot spot models with analytic solutions to infer the evolution of the fusion reaction history for each mechanism. The models give valuable insight into the meaning and cause of fusion reaction history and nuclear burnwidth measurements.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2021

Anaerobic gut fungi are an untapped reservoir of natural products

Anaerobic fungi (class Neocallimastigomycetes) thrive as low-abundance members of the herbivore digestive tract. The genomes of anaerobic gut fungi are poorly characterized and have not been extensively mined for the biosynthetic enzymes of natural products such as antibiotics. Here, we investigate the potential of anaerobic gut fungi to synthesize natural products that could regulate membership within the gut microbiome. Here, complementary 'omics' approaches were combined to catalog the natural products of anaerobic gut fungi from four different representative species: Anaeromyces robustus (A. robustus), Caecomyces churrovis (C. churrovis), Neocallimastix californiae (N. californiae), and Piromyces finnis (P. finnis). In total, 146 genes were identified that encode biosynthetic enzymes for diverse types of natural products, including nonribosomal peptide synthetases and polyketide synthases.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

Predicting transcriptional responses to cold stress across plant species

Although genome-sequence assemblies are available for a growing number of plant species, gene-expression responses to stimuli have been cataloged for only a subset of these species. Many genes show altered transcription patterns in response to abiotic stresses. However, orthologous genes in related species often exhibit different responses to a given stress. Accordingly, data on the regulation of gene expression in one species are not reliable predictors of orthologous gene responses in a related species. Here, we trained a supervised classification model to identify genes that transcriptionally respond to cold stress. A model trained with only features calculated directly from genome assemblies exhibited only modest decreases in performance relative to models trained by using genomic, chromatin, and evolution/diversity features. Models trained with data from one species successfully predicted which genes would respond to cold stress in other related species. Cross-species predictions remained accurate when training was performed in cold-sensitive species and predictions were performed in cold-tolerant species and vice versa. Models trained with data on gene expression in multiple species provided at least equivalent performance to models trained and tested in a single species and outperformed single-species models in cross-species prediction. These results suggest that classifiers trained on stress data from well-studied species may suffice for predicting gene-expression patterns in related, less-studied species with sequenced genomes.

54 ENVIRONMENTAL SCIENCES↗