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At least 1,639 records · Page 91

Double DAP-seq uncovered synergistic DNA binding of interacting bZIP transcription factors

Many eukaryotic transcription factors (TF) form homodimer or heterodimer complexes to regulate gene expression. Dimerization of BASIC LEUCINE ZIPPER (bZIP) TFs are critical for their functions, but the molecular mechanism underlying the DNA binding and functional specificity of homo- versus heterodimers remains elusive. To address this gap, we present the double DNA Affinity Purification-sequencing (dDAP-seq) technique that maps heterodimer binding sites on endogenous genomic DNA. Using dDAP-seq we profile twenty pairs of C/S1 bZIP heterodimers and S1 homodimers in Arabidopsis and show that heterodimerization significantly expands the DNA binding preferences of these TFs. Analysis of dDAP-seq binding sites reveals the function of bZIP9 in abscisic acid response and the role of bZIP53 heterodimer-specific binding in seed maturation. The C/S1 heterodimers show distinct preferences for the ACGT elements recognized by plant bZIPs and motifs resembling the yeast GCN4 cis -elements. This study demonstrates the potential of dDAP-seq in deciphering the DNA binding specificities of interacting TFs that are key for combinatorial gene regulation.

59 BASIC BIOLOGICAL SCIENCES↗

Detector needs for STS instruments

This white paper contains an analysis of the requirements for the detectors for the initial suite of neutron scattering instruments at the Second Target Station, STS. The detector technologies proposed are compared with the instrument requirements, in-house proficiencies and strengths, and where appropriate, expertise at other facilities. Where relevant, alternative detector options are proposed. The performance gaps between the current state-of-the-art and the required characteristics are identified and projects within the R&D program are proposed in order to close these gaps. Further, neutron beam monitor needs are considered in a similar light.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Mineralogy of Bennu From Spectral Analysis of the Sample Returned By OSIRIS-REx

Here we report on preliminary tests of hypotheses related to the mineralogy of Bennu that were generated from spectral data collected during the asteroid operations phase of the Origins, Spectral Interpretation, Resource Identification, and SecurityRegolith Explorer (OSIRIS-REx) mission. We focus on whether laboratory spectra confirm the hypotheses that (a) Bennu inorganic materials are dominated by Mg-rich phyllosilicates (with less than 10 vol% anhydrous silicates), contain magnetite, and exhibit signatures of up to three distinct carbonate phases, and (b) the dominant lithologies are comparable in bulk mineralogy to the most aqueously altered carbonaceous chondrites (CCs; petrologic types ≤2.4 in the classification, or types 1 and 2 in the classification). Signatures of organics also were detected but are not discussed here. Analysis of material returned from asteroid Bennu contributes to the broader goals of the OSIRIS-REx mission by allowing us to compare sample data at microscopic scales to meteorites, meter-scale asteroid observations, and disk-integrated ground-based observations. These results allow us to better recognize, and resolve, key gaps in our understanding of primitive solar system bodies.

V. E. Hamilton↗

New Perspective on Slosh Dynamics in High-Gravity Regimes for Lunar Missions

Slosh dynamics particularly in high gravity regime is of high interest to the NASA Human Landing Systems program, which aims to return humans to the Moon. This paper reexamines the commonly accepted equivalence between pendulum and massspring-damper mechanical analogies, demonstrating the differences through simulations and their impact on design and analysis. This study re-derives equations of motion for these mechanical models including mass-spring-damper (MSD) and pendulum by relaxing simplifying assumptions that had been typically applied to large launch vehicles and may be violated for lunar and planetary landing applications. The newly-derived equations uncover potential modeling gaps when applying the pendulum and MSD models, and the need for additional considerations in their application. Finally, the newly-derived equations are validated using MathWorks® Simscape™ Multibody™ dynamics toolbox simulation.

Pendulum↗

ISO Guest Observer Data Analysis and LWS Instrument Team Activities

We have designed and fabricated infrared filters for use at wavelengths greater than or equal to 15 microns. Unlike conventional dielectric filters used at the short wavelengths, ours are made from stacked metal grids, spaced at a very small fraction of the performance wavelengths. The individual lattice layers are gold, the spacers are polyimide, and they are assembled using integrated circuit processing techniques; they resemble some metallic photonic band-gap structures. We simulate the filter performance accurately, including the coupling of the propagating, near-field electromagnetic modes, using computer aided design codes. We find no anomalous absorption. The geometrical parameters of the grids are easily altered in practice, allowing for the production of tuned filters with predictable useful transmission characteristics. Although developed for astronomical instrumentation, the filters are broadly applicable in systems across infrared and terahertz bands.

Oliversen, Ronald J.↗

A three-dimensional pore-scale model for redox flow battery electrode design analysis

A three-dimensional (3-D) pore-scale model has been developed to construct multiscale fibrous electrodes for redox flow batteries (RFB). New designs, such as biporous electrodes modify electrode structures by creating secondary pores on single carbon fiber to reduce internal battery resistance. Existing pore-scale models only resolve electrodes to the single carbon fiber scale and cannot incorporate recent multiscale electrode designs into numerical models. Our new model aims to bridge this gap and provide a tool to rapidly screen new electrode configurations. Two multiscale electrodes, laser-perforated and biporous electrodes, were investigated at varying operation conditions with the proposed 3-D pore-scale models. The laser-perforated electrode exhibits a reduced pressure drop, but follows the same permeability correlation compared to the corresponding pristine electrode. For the biporous electrode, the added specific surface area and faster reaction kinetics from the secondary pores are the most influential factors leading to improved battery efficiency. However, operating the biporous electrode in limiting current density conditions should be avoided due to the decreased mass transfer efficiency and a more significant voltage loss. Finally, we believe that our 3-D pore-scale model can accelerate the flow battery electrode design process and provide new insights into electrode geometry optimizations.

25 ENERGY STORAGE↗

Spatial and Temporal Interpolation Analysis Process of Shock Loading

The following document serves to describe the current process that is utilized by W-13 analysts to approximate the pressure-time boundary condition seen by a test object from shock tube loading. The intent of this report is to capture the current capability and to encourage continued growth and development. Information on the required input variables, mapping process, and generated output information is covered in the following sections. Throughout the document, gaps and weaknesses of the mapping process are noted to encourage future development efforts.

42 ENGINEERING↗

Energy Cost Analysis and Operational Range Prediction Based on Medium- and Heavy-Duty Electric Vehicle Real-World Deployments across the United States

While the market for medium- and heavy-duty battery-electric vehicles (MHD EVs) is still nascent, a growing number of these vehicles are being deployed across the U.S. This study used over 2.3 million miles of operational data from multiple types of MHD EVs across various regions and operating conditions to address knowledge gaps in total cost of ownership and operational range. First, real-world energy cost savings were determined: MHD fleets should experience energy cost savings each year from 2021 to 2035, regardless of vehicle platform, with the greatest savings seen in transit buses (up to USD 4459 annually) and HD trucks (up to USD 3284 annually). Second, to help fleets across various geographies throughout the U.S. assess the suitability of EVs for their year-round operating needs, operational range was modeled using the XGBoost algorithm (R2: 70%) given 22 input features relevant to vehicle efficiency. Finally, this paper recommends (1) that MHD fleets apply energy-saving practices to minimize the impacts of cold temperatures and high congestion levels on vehicle efficiency and range, and (2) that local hauling fleets select trucks with a nominal range nearly double the expected maximum daily range to account for range losses under local, urban driving conditions.

Qiu, Yin (ORCID:0009000900948794)↗

Assessing decision boundaries under uncertainty

In order to make design decisions, engineers may seek to identify regions of the design domain that are acceptable in a computationally efficient manner. A design is typically considered acceptable if its reliability with respect to parametric uncertainty exceeds the designer’s desired level of confidence. Despite major advancements in reliability estimation and in design classification via decision boundary estimation, the current literature still lacks a design classification strategy that incorporates parametric uncertainty and desired design confidence. To address this gap, this paper offers a novel interpretation of the acceptance region by defining the decision boundary as the hypersurface which isolates the designs that exceed a user-defined level of confidence given parametric uncertainty. This work addresses the construction of this novel decision boundary using computationally efficient algorithms that were developed for reliability analysis and decision boundary estimation. The approach proposed in this paper is verified on two physical examples from structural and thermal analysis using Support Vector Machines and Efficient Global Optimization-based contour estimation.

97 MATHEMATICS AND COMPUTING↗

The research challenges in security and safeguards for nuclear fission batteries

This paper discusses the nuclear security and safeguards research challenges presented by the development and deployment of nuclear fission batteries. These are defined as easily transportable and deployable nuclear systems which are designed to operate either unattended or autonomously. We start by defining the current landscape of domestic and international safeguards and security and discuss how it can be affected by the introduction these new nuclear systems. We then specifically discuss the technology gaps and technologies to be developed to facilitate their practical deployment. We find that, as expected, we can leverage conclusions from existing security and safeguards studies for small modular rectors and develop bespoke target set analyses to inform security postures based on probabilistic risk assessment. We find also that specific fission battery security economic analysis tools are needed and security by design must be applied early. However, the most important finding is that these new systems will require a new comprehensive set of cyber tools covering transportation, installation, operation, maintenance security of the fission battery systems. Altogether, we find that the development of the necessary security and safeguards requirements at the design phase of such a technology will be of great benefit in the smooth deployment of this modern nuclear energy system.

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

Geologic hydrogen: a review of resource potential, subsurface dynamics, exploration, production, transportation, and research opportunities

Hydrogen is a versatile resource with critical roles in decarbonization, industrial manufacturing, and energy integration. However, most hydrogen today is produced from fossil fuels, resulting in high emissions and energy consumption. Although low-carbon hydrogen production methods, such as steam methane reforming with carbon capture and renewable-powered electrolysis, are advancing, their high costs hinder large-scale deployment. Identifying alternative pathways for producing low-cost, low-emission hydrogen is therefore essential. Geologic hydrogen, referring to natural and stimulated hydrogen generated in the Earth's subsurface, has attracted growing attention as a potential source of sustainable, economically viable, and environmentally favorable hydrogen. This paper provides a comprehensive review of geologic hydrogen, covering its resource potential, origins, migration and trapping mechanisms, exploration techniques, production strategies, and pipeline transportation. It also identifies key knowledge gaps and proposes a roadmap for future research. The review indicates that geologic hydrogen has vast resource potential and can leverage existing subsurface technologies and geophysical exploration methods. However, major challenges persist, including uncertain hydrogen generation rates, limited understanding and control of serpentinization processes, costly transportation infrastructure, the lack of validated techno-economic analysis, and potential social and environmental issues. As the field is still in its early stages, progress will require interdisciplinary collaboration spanning geoscience, engineering, economics, environmental science, and policy and regulation.

42 ENGINEERING↗

Generalized symmetry constraints on deformed 4D SCFTs

We explore the consequence of generalized symmetries in four-dimensional N = 1 superconformal field theories. First, we classify all possible supersymmetric gauge theories with a simple gauge group that have a nontrivial one-form symmetry and flows to a superconformal field theory. Upon identifying unbroken discrete zero-form symmetries from the Adler-Bell-Jackiw (ABJ) anomaly, we find that many of these theories have mixed zero-form or one-form ’t Hooft anomalies. Then we classify the relevant deformations of these SCFTs that preserve the anomaly. From this mixed anomaly together with the anomalies of the discrete zero-form symmetries, we find obstructions for the relevant deformations of these SCFTs to flow to a trivially gapped phase. We also study non-Lagrangian SCFTs formed by gauging copies of Argyres-Douglas theories and constrain their deformations. In particular, we explore a new duality between the diagonal gauging of two D 3 ( S U ( N ) ) theories and S U ( N ) gauge theory with two adjoints. We also repeat our analysis for a host of nonsupersymmetric gauge theories having nontrivial one-form symmetry including examples that appear to flow to Bank-Zaks type CFTs. Published by the American Physical Society 2025

Kang, Monica Jinwoo (ORCID:0000000204542064)↗

Effects of JP-8 Jet Fuel on Homeostasis of Clone 9 Rat Liver Cells

Chronic exposure to JP-8 and other kerosene-based petroleum distillates has been associated with hepatic, renal, neurologic, pulmonary, and immune toxicity. However, the effects of kerosene-type jet fuels on cellular homeostasis hitherto have not been reported. Fluorescence imaging using a Meridian Ultima laser scanning fluorescence microscope was used to evaluate the effect of JP-8 jet fuel on a communication competent rat liver cell line. Several endpoints of cellular function were measured including gap junctional intercellular communication (GJIC), mitochondrial and plasma membrane potential (MMP and PMP, respectively), intracellular glutathione (GSH) concentration, glutathione-S-transferase (GST) activity, and reactive oxygen species (ROS) generation. Cells were treated with JP-8 (0.01 to 2% in ethanol (EtOH)) for the following time points: 1 h, 24 h, 48 h, and analysis immediately after addition of jet fuel. GJIC analyzed directly after addition of 1% JP-8 was reduced 4.9-fold relative to EtOH-dosed control groups and further reduction (12.6-fold) was observed in cells treated for 1 h. Moreover, GJIC was not recoverable in cells treated with 1% JP-8 for 1 h and subsequently washed and incubated in fresh medium for 1 h. Significant changes in GSH content and GST activity were observed in cells analyzed directly after addition of 1% JP-8. GSH content increased in cells treated for 1 h with less than 2% JP-8 whereas treatment with 2% JP-8 for 1 h resulted in a 50% reduction in intracellular GSH relative to EtOH-dosed controls. Cells treated with 1% JP-8 for 48 h exhibited changes in GSH levels. However, higher JP-8 concentrations exhibited more pronounced changes in GSH and GST, which led to suppression of GSH synthesis. ROS increased in a dose-responsive fashion at JP-8 concentrations up to 1%, but decreased to 80% of control values at 2% and 3% JP-8. A 25% reduction in PMP was observed in cells treated for 1 h with 1% JP-8. In contrast, cells treated for 48 h with 2% JP-8 exhibited a 25% increase when compared to control. No significant changes were noted in the 0.01 and 1% treatment groups. Moreover, no significant changes were observed in MMP or intracellular calcium concentrations in cells treated with 0.01 to 2% JP-8 for up to 48 h. In summary, the most significant effects observed in the present study which may contribute to the toxicity of JP-8 jet fuel in cultured rat liver cells include effects on GJIC, ROS production, and GSH depletion at high (i.e., greater than 2%) JP-8 concentrations.

Wilson, C. L.↗

Using CFD as Rocket Injector Design Tool: Recent Progress at Marshall Space Flight Center

The choice of tools used for injector design is in a transitional phase between exclusive reliance on the empirically based correlations and extensive use of computational fluid dynamics (CFD). The Next Generation Launch Technology (NGLT) Program goals emphasizing lower costs and increased reliability have produced a need to enable CFD as an injector design tool in a shorter time frame. This is the primary objective of the Staged Combustor Injector Technology Task currently under way at Marshall Space Flight Center (MSFC). The documentation of this effort begins with a very brief status of current injector design tools. MSFC's vision for use of CFD as a tool for combustion devices design is stated and discussed with emphasis on the injector. The concept of the Simulation Readiness Level (SRL), comprised of solution fidelity, robustness and accuracy, is introduced and discussed. This quantitative measurement is used to establish the gap between the current state of demonstrated capability and that necessary for regular use in the design process. MSFC's view of the validation process is presented and issues associated with obtaining the necessary data are noted and discussed. Three current experimental efforts aimed at generating validation data are presented. The importance of uncertainty analysis to understand the data quality is also demonstrated. First, a brief status of current injector design tools is provided as context for the current effort. Next, the MSFC vision for using CFD as an injector design tool is stated. A generic CFD-based injector design methodology is also outlined and briefly discussed. Three areas where MSFC is using injector CFD analyses for program support will be discussed. These include the Integrated Powerhead Development (IPD) engine which uses hydrogen and oxygen propellants in a full flow staged combustion (FFSC) cycle and the TR-107 and the RS84 engine both of which use RP-1 and oxygen in an ORSC cycle. Finally, an attempt is made to objectively summarize what progress has been made at MSFC in enabling CFD as an injector design tool.

Tucker, Kevin↗

Rudder/Fin Seals Investigated for the X-38 Re-Entry Vehicle

NASA is developing the X-38 vehicle that will demonstrate the technologies required for a potential crew return vehicle for the International Space Station. This vehicle would serve both as an ambulance for medical emergencies and as an evacuation vehicle for the space station. Control surfaces on the X-38 (body flaps and rudder/fin assemblies) require high temperature seals to limit hot gas ingestion and the transfer of heat to underlying low temperature structures. Working with the NASA Johnson Space Center, the Seals Team at the NASA Glenn Research Center completed a series of tests to further characterize baseline seal designs for the rudder/fin interfaces of the X-38. The structures of the rudder/fin assembly and its associated seals are shown in the the preceding illustration. Tests performed at Glenn indicated that exposure of the seals in a compressed state at simulated seal re-entry temperatures resulted in a large permanent set and loss of seal resiliency. This could be of concern because the seals are required to maintain contact with the sealing surfaces while the vehicle goes through the maximum re-entry heating cycle to prevent hot gases from leaking past the seals and damaging interior low-temperature structures. To simulate conditions in which the seals may become unloaded during use, such as when they take on a large permanent set, Glenn researchers performed room temperature flow and compression tests to determine seal flow rates, resiliency, and unit loads under minimal loads. Flow rates through an unloaded (i.e., 0-percent compression) double seal arrangement were twice those of a double seal compressed to the 20-percent design compression level. These flow rates are being used in thermal analyses to predict the effect of flow through the seals on over-all seal temperatures. Compression test results showed that seal unit loads and contact pressures were below the limits that Johnson had set as goals for the seals. In the rudder/fin seal location, the seals are in contact with shuttle thermal tiles and are moved across the tiles as the rudder is rotated during re-entry. Low seal unit loads and contact pressures are required to limit the loads on these tiles and minimize any damage that the seals could cause. A series of tests were performed on these seals in NASA Ames Research Center's arc jet facility. The arc jet facility approximates relevant thermal environments that a seal or other structure would be subjected to during extreme heating conditions such as those experienced during space vehicle re-entry. Eleven tests were completed, including one test in which no seal was installed in the gap to examine the flow of heat down into the gap. The seal was compressed between stationary insulation tiles and a movable elevon that was rotated during the test to deflect the arc jet exhaust into the seal gap. Peak seal temperatures as high as 2000 F were reached during the 5-min tests. Results of these tests indicate satisfactory performance of the seal for single-use (e.g., X-38) applications. The results of these tests were shared with the NASA Johnson Space Center and are being used to validate aerothermostructural analysis codes that predict seal temperatures under these conditions. The tests performed at Glenn have provided valuable information to Johnson about the performance of the seals that they are considering using in the rudder/fin location of the X-38 vehicle. Glenn and Johnson are currently defining what additional work needs to be done to develop the final rudder/fin seal design for the X-38 vehicle.

Dunlap, Patrick H., Jr.↗

Relationship Between Satellite-Derived Snow Cover and Snowmelt-Runoff Timing and Stream Power in the Wind River Range, Wyoming

Earlier onset of springtime weather including earlier snowmelt has been documented in the western United States over at least the last 50 years. Because the majority (>70%) of the water supply in the western U.S. comes from snowmelt, analysis of the declining spring snowpack (and shrinking glaciers) has important implications for streamflow management. The amount of water in a snowpack influences stream discharge which can also influence erosion and sediment transport by changing stream power, or the rate at which a stream can do work such as move sediment and erode the stream bed. The focus of this work is the Wind River Range (WRR) in west-central Wyoming. Ten years of Moderate-Resolution Imaging Spectroradiometer (MODIS) snow-cover, cloud- gap-filled (CGF) map products and 30 years of discharge and meteorological station a are studied. Streamflow data from six streams in the WRR drainage basins show lower annual discharge and earlier snowmelt in the decade of the 2000s than in the previous three decades, though no trend of either lower streamflow or earlier snowmelt was observed using MODIS snow-cover maps within the decade of the 2000s. Results show a statistically-significant trend at the 95% confidence level (or higher) of increasing weekly maximum air temperature (for three out of the five meteorological stations studied) in the decade of the 1970s, and also for the 40-year study period. MODIS- derived snow cover (percent of basin covered) measured on 30 April explains over 89% of the variance in discharge for maximum monthly streamflow in the decade of the 2000s using Spearman rank correlation analysis. We also investigated stream power for Bull Lake Creek Above Bull Lake from 1970 to 2009; a statistically-significant trend toward reduced stream power was found (significant at the 90% confidence level). Observed changes in streamflow and stream power may be related to increasing weekly maximum air temperature measured during the 40-year study period. The strong relationship between percent of basin covered and streamflow indicates that MODIS data is useful for predicting streamflow, leading to improved reservoir management.

Hall, Dorothy K.↗

Relationship Between Satellite-Derived Snow Cover and Snowmelt-Runoff Timing and Stream Power in the Wind River Range, Wyoming

Earlier onset of springtime weather including earlier snowmelt has been documented in the western United States over at least the last 50 years. Because the majority (>70%) of the water supply in the western U.S. comes from snowmelt, analysis of the declining spring snowpack (and shrinking glaciers) has important implications for streamflow management. The amount of water in a snowpack influences stream discharge which can also influence erosion and sediment transport by changing stream power, or the rate at which a stream can do work such as move sediment and erode the stream bed. The focus of this work is the Wind River Range (WRR) in west-central Wyoming. Ten years of Moderate-Resolution Imaging Spectroradiometer (MODIS) snow-cover, cloud- gap-filled (CGF) map products and 30 years of discharge and meteorological station data are studied. Streamflow data from six streams in the WRR drainage basins show lower annual discharge and earlier snowmelt in the decade of the 2000s than in the previous three decades, though no trend of either lower streamflow or earlier snowmelt was observed using MODIS snow-cover maps within the decade of the 2000s. Results show a statistically-significant trend at the 95% confidence level (or higher) of increasing weekly maximum air temperature (for three out of the five meteorological stations studied) in the decade of the 1970s, and also for the 40-year study period. MODIS-derived snow cover (percent of basin covered) measured on 30 April explains over 89% of the variance in discharge for maximum monthly streamflow in the decade of the 2000s using Spearman rank correlation analysis. We also investigated stream power for Bull Lake Creek Above Bull Lake from 1970 to 2009; a statistically-significant end toward reduced stream power was found (significant at the 90% confidence level). Observed changes in streamflow and stream power may be related to increasing weekly maximum air temperature measured during the 40-year study period. The strong relationship between percent of basin covered and streamflow indicates that MODIS data is useful for predicting streamflow, leading to improved reservoir management

Hall, Dorothy K.↗

CCD reflectance spectra of selected asteroids. I - Presentation and data analysis considerations

Narrowband reflectance spectra have been acquired which contribute to the library of asteroid data in the visible and near-IR spectral regions. The spectra support the existence of aqueous alteration products on asteroids located in the outer part of the main asteroid belt out to at least 4 AU. No evidence for features similar to the spectral features of ordinary chondrite meteorites was found in the spectra of asteroids located near the 3:1 Kirkwood Gap chaotic zone.

Vilas, Faith↗