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At least 1,639 records · Page 91

Modulation of the Eastern Equatorial Pacific Seasonal Cycle by Tropical Instability Waves

Feedbacks from tropical instability waves (TIWs) on the seasonal cycle of the eastern Pacific Ocean are studied using two eddy-rich ocean simulations, with and without TIWs. By warming the equatorial waters by up to 0.4°C through nonlinear advection in boreal summer and fall, TIWs reduce the amplitude of the seasonal cycle in upper ocean temperatures. In addition, TIWs stabilize the upper part of the Equatorial Undercurrent (EUC) through enhanced barotropic energy conversion, leading to a year-round weakening by -0.15 m s -1 and preventing an unrealistic re-intensification in boreal fall usually found in non-eddy resolving models. A coarser simulation at 1-degree horizontal resolution fails to reproduce the TIW-induced nonlinear warming of equatorial waters, but succeeds in inhibiting the EUC re-intensification. This suggests a threshold effect in TIW strength, associated with the model's ability to simulate eddies, which may be responsible for long-standing biases displayed by global climate models in this region.

58 GEOSCIENCES↗

The Rate of Canopy Development Modulates the Link Between the Timing of Spring Leaf Emergence and Summer Moisture

Shifts in phenological timing have important implications for ecosystem processes, with spring leaf emergence as a dominant control of carbon, water, and energy cycling. Phenological events are predominantly determined by weather and climate, therefore dynamic in time and sensitive to climate feedbacks. Improving our understanding of how ecosystems respond to changes in phenological timing will enhance our ability to assess summer soil water availability, since the timing of spring leaf emergence may lead to soil moisture deficits later in the growing season. We leveraged data from five AmeriFlux towers in central and eastern United States to investigate the extent spring leaf emergence (i.e., start of spring, SoS ) influences rates at which forest canopies develop and how this impacts summer soil moisture ( θ JJA ) variability. Our results indicate that ecosystem processes, specifically gross primary production ( GPP ) and evapotranspiration ( ET ), exhibit compensatory responses to varying leaf emergence; with delayed spring-onset, the canopy developed more quickly, resulting in rapid GPP and ET increases, consistent across sites. Nonetheless, early SoS is a relatively good indicator for potential summer soil water deficits, particularly when it occurs together with meteorological conditions (i.e., lower-than-average precipitation, hot summer temperatures) that contribute to soil water deficits. When these meteorological conditions coincide with early SoS , θ JJA deficits are exacerbated. To the extent that these extreme conditions occur more frequently under future climate scenarios, the dynamics of spring phenology and hydroclimate may play an increasingly important role in portending the likelihood of summer water deficits, which are projected to become more severe.

54 ENVIRONMENTAL SCIENCES↗

Mesoscale Convective Systems Modulated by Convectively Coupled Equatorial Waves

Mesoscale convective systems (MCSs) produce over 50% of tropical precipitation and account for the majority of extreme rainfall and flooding events. MCSs are considered the building blocks of larger-scale convectively coupled equatorial waves (CCEWs). While CCEWs can provide favorable environments for convection, how CCEWs can systematically impact organized convection and thereby MCS characteristics is less clear. We examine this question by analyzing a global MCS tracking data set. During the active phase of CCEWs, MCS frequency increases and MCSs rain harder, produce more lifetime total rain, and grow larger in size. The probability of extreme MCSs also elevates. These changes are most pronounced when MCSs are associated with Kelvin waves and tropical depression-type waves while less so with the Madden-Julian Oscillation. Furthermore, these results can be benchmarks to improve model representation of MCS interactions with large-scale circulations and can be leveraged for operational forecasts of high-impact MCSs at extended lead times.

54 ENVIRONMENTAL SCIENCES↗

Variations in Bedrock and Vegetation Cover Modulate Subsurface Water Flow Dynamics of a Mountainous Hillslope

Abstract Predicting the hydrological response of watersheds to climate disturbances requires a detailed understanding of the processes connecting hillslopes and streams. Using a network of soil moisture and temperature sensors, electrical resistivity tomography monitoring, and a weather station we assess the above and below‐ground processes driving the hydrological response of a hillslope during snowmelt and summer monsoon. The transect covers bedrock and vegetation gradients, with a steep upper part characterized by shallow bedrock, and gentle lower part underlain by colluvium. The main vegetation cover is conifers on the upper, and grass and veratrum on the lower part. Combined with a simplified hydrological model, we show that the thin soil layer of the steep slope acts as a preferential flow path, leading to mostly shallow lateral flow, interrupted by vertical flow, mostly at tree locations, and likely facilitated by flow along fractures and roots. Vertical flow and upstream‐driven groundwater dynamics are prevailing at the colluvium, presenting a very different hydrological behavior compared to the upper part. These results show that subsurface structure and features have a strong control on the hydrological response of a hillslope and that those can create considerably varying hydrological dynamics across small spatial scales.

54 ENVIRONMENTAL SCIENCES↗

Microseismicity Modulation Due To Changes in Geothermal Production at San Emidio, Nevada, USA

Brief cessations of geothermal production can induce seismicity, a phenomenon that has drawn increasing attention in recent years. Such observations are rare, and the underlying mechanism requires careful analysis. In April 2022, a dense seismic and hydrologic monitoring system was deployed at the San Emidio geothermal field, Nevada, to accompany a planned power plant shutdown. Using the dense seismic array data, we detected and located ∼1,800 microseismic events (MSEs) and developed a high-resolution tomographic P-wave velocity model. We observed substantially increased microseismicity during shutdown. Most MSEs occurred on pre-existing normal faults, which are contained within extremely low-velocity zones that are likely damaged, fluid-filled, and hydraulically connected to nearby production wells. Hydrologic data show rapid fluid pressure increases of <60 kPa following the shutdown. We suggest that the cessation of production rapidly increased fluid pressures along pre-existing fault zones, activating critically stressed fault patches and fractures and producing microseismicity.

Guo, Hao [University of Wisconsin-Madison, WI (Uni↗

Propagation and Periodicity of Mars's Northern Annular Mode Modulates the Dust Cycle

Abstract We document the propagation of annular modes—zonally symmetric patterns of variability—in Mars's atmosphere using a reanalysis dataset. Mars's Northern Annular Mode (MNAM) sees anomalies of zonal‐mean zonal wind emerge near the subtropics and migrate poleward with a period of 150 days, similarly to Earth's Southern Annular Mode. The mechanism of propagation involves the interaction of the two leading empirical orthogonal functions that define the MNAM. Moreover, the propagation encourages alternating bands of surface wind stress to migrate polewards with a 150‐day period. In addition, a 150‐day periodicity in anomalous column dust optical depth most likely emerges in response to extrema of the MNAM. The combination of the impact of the MNAM's internally forced periodicity on the surface wind stress and the seasonal cycle may contribute to the inter‐annual variability of global dust events, as suggested by a Monte Carlo estimate that correctly approximates the observed incidence of global dust events.

54 ENVIRONMENTAL SCIENCES↗

Updraft Width Modulates Ambient Atmospheric Controls on Convective Cloud Depth

Abstract The depth of convective clouds affects vertical transport of atmospheric constituents, influencing downstream weather and climate. Atmospheric controls on the maximum depth reached by moist convection are investigated with radar‐tracked convective cells tagged with sounding‐derived atmospheric parameters from a field campaign in central Argentina. Regression analyses show that narrow (<12‐km diameter) and wide (>16‐km diameter) cell depths respond to disparate factors, where cell areas are defined using composite reflectivity signatures. Undiluted lifted parcel indices including convective available potential energy (CAPE) and level of neutral buoyancy (LNB) are top predictors of wide cell maximum depth while mid‐tropospheric relative humidity is the top predictor of narrow cell maximum depth. Because narrow cells are more numerous than wide cells, the overall outcome of the full cell population does not strongly correlate with CAPE and LNB conditions. Tracked cells and atmospheric conditions in a simulation with 3‐km grid spacing covering the field campaign produce similar results to those observed. Narrow cells that are relatively deep have a cooler and moister mid‐troposphere with weaker free tropospheric subsidence, while relatively deep wide cells have much warmer and moister lower tropospheric conditions. These atmospheric differences are present 1 hr before cell initiation at both a fixed observing site and variable cell initiation locations. Simulated narrow cell maximum equivalent potential temperature decreases with height at a rate similar to the ambient vertical gradient, causing these cells to fall short of their LNB and supporting the view that entrainment‐driven dilution is a dominant control on their depth.

54 ENVIRONMENTAL SCIENCES↗

Fault Network Geometry Modulates Earthquake Source Spectra Across Scales

Earthquake source spectra provide unique insights into the earthquake rupture process. Motivated by previous research suggesting that complex fault geometries enhance high‐frequency seismic radiation, we study the influence of fault network geometry on earthquake source spectra using multiple independent observations. At regional scales, we examine correlations of stress drop measurements with surface fault trace misalignment in Southern California, Japan, and Central Italy. At a global scale, we examine correlations of moment‐rate function complexity of large earthquakes with focal mechanism variability, a proxy for local fault complexity. Despite significant scatter in the observations, we find overall consistent positive correlations. The concept that elastic interactions of discrete fault structures during the earthquake rupture process generates high‐frequency ground motions offers a coherent framework for interpreting our observations. These findings suggest that variations in fault complexity explain why some earthquakes produce stronger high‐frequency ground motions than others.

Lee, Jaeseok [Brown Univ., Providence, RI (United ↗

When Do Riverine Systems “Feel the Burn”? Simulating How Burn Extent and Severity Modulate Hydrologic Controls on Biogeochemical Export

Wildfires impact terrestrial landscapes and downstream river corridors through shifts in vegetation and soil properties leading to downstream hydrologic and water quality impacts. The magnitude of these impacts depend on a complex and interconnected set of wildfire, landscape, and aquatic processes. Here, we isolate the impact of post-fire hydrologic changes on streamflow, nitrate, and dissolved organic carbon using the Soil and Water Assessment Tool (SWAT) model. We explore how responses differ across burn severity and area burned in two test basins: a humid forested basin and a semi-arid mixed land use basin. We ran 1830 wildfire simulations testing impacts of area burned, burn severity, and post-fire precipitation on streamflow, nitrate, and dissolved organic carbon. Our work suggests that area burned thresholds differ with burn severity and analyte. Additionally, post-fire transport of dissolved organic carbon was sensitive to both area burned and severity, while nitrate was primarily sensitive to area burned. Despite a muted (−9.5 to 5.7 mm yr −1 change) hydrologic response in the semi-arid basin, the model predicted large (7%–288% increase) shifts in dissolved organic carbon, suggesting that post-fire shifts in flow pathways and soil properties are key in its response. The limited shifts in nitrate responses in the simulations highlight that terrestrial post-fire transformations, rather than hydrologic changes, may control the increases in stream nitrate often observed post-fire. As wildfire regimes are shifting, improving understanding of post-fire nutrient export responses is critical to protect freshwater resources and aquatic ecosystems.

Wampler, Katherine A. [Pacific Northwest National ↗

CRL4A DTL degrades DNA-PKcs to modulate NHEJ repair and induce genomic instability and subsequent malignant transformation

Genomic instability induced by DNA damage and improper DNA damage repair is one of the main causes of malignant transformation and tumorigenesis. DNA double strand breaks (DSBs) are the most detrimental form of DNA damage, and nonhomologous end-joining (NHEJ) mechanisms play dominant and priority roles in initiating DSB repair. A well-studied oncogene, the ubiquitin ligase Cullin 4A (CUL4A), is reported to be recruited to DSB sites in genomic DNA, but whether it regulates NHEJ mechanisms of DSB repair is unclear. Here, we discovered that the CUL4A-DTL ligase complex targeted the DNA-PKcs protein in the NHEJ repair pathway for nuclear degradation. Overexpression of either CUL4A or DTL reduced NHEJ repair efficiency and subsequently increased the accumulation of DSBs. Moreover, we demonstrated that overexpression of either CUL4A or DTL in normal cells led to genomic instability and malignant proliferation. Consistent with the in vitro findings, in human precancerous lesions, CUL4A expression gradually increased with increasing malignant tendency and was negatively correlated with DNA-PKcs and positively correlated with γ-H2AX expression. Collectively, this study provided strong evidence that the CUL4A-DTL axis increases genomic instability and enhances the subsequent malignant transformation of normal cells by inhibiting NHEJ repair. These results also suggested that CUL4A may be a prognostic marker of precancerous lesions and a potential therapeutic target in cancer.

59 BASIC BIOLOGICAL SCIENCES↗

Enhanced multi-carbon alcohol electroproduction from CO via modulated hydrogen adsorption

Multi-carbon alcohols such as ethanol are valued as fuels in view of their high energy density and ready transport. Unfortunately, the selectivity toward alcohols in CO 2 /CO electroreduction is diminished by ethylene production, especially when operating at high current densities (>100 mA cm –2 ). Here we report a metal doping approach to tune the adsorption of hydrogen at the copper surface and thereby promote alcohol production. Using density functional theory calculations, we screen a suite of transition metal dopants and find that incorporating Pd in Cu moderates hydrogen adsorption and assists the hydrogenation of C 2 intermediates, providing a means to favour alcohol production and suppress ethylene. We synthesize a Pd-doped Cu catalyst that achieves a Faradaic efficiency of 40% toward alcohols and a partial current density of 277 mA cm –2 from CO electroreduction. The activity exceeds that of prior reports by a factor of 2.

59 BASIC BIOLOGICAL SCIENCES↗

A joint role for forced and internally-driven variability in the decadal modulation of global warming

Despite the observed monotonic increase in greenhouse-gas concentrations, global mean temperature displays important decadal fluctuations typically attributed to both external forcing and internal variability. Here, we provide a robust quantification of the relative contributions of anthropogenic, natural, and internally-driven decadal variability of global mean sea surface temperature (GMSST) by using a unique dataset consisting of 30-member large initial-condition ensembles with five Earth System Models (ESM-LE). We present evidence that a large fraction (~29–53%) of the simulated decadal-scale variance in individual timeseries of GMSST over 1950–2010 is externally forced and largely linked to the representation of volcanic aerosols. Comparison with the future (2010–2070) period suggests that external forcing provides a source of additional decadal-scale variability in the historical period. Given the unpredictable nature of future volcanic aerosol forcing, it is suggested that a large portion of decadal GMSST variability might not be predictable.

54 ENVIRONMENTAL SCIENCES↗

Vegetation forcing modulates global land monsoon and water resources in a CO 2 -enriched climate

The global monsoon is characterised by transitions between pronounced dry and wet seasons, affecting food security for two-thirds of the world’s population. Rising atmospheric CO 2 influences the terrestrial hydrological cycle through climate-radiative and vegetation-physiological forcings. How these two forcings affect the seasonal intensity and characteristics of monsoonal precipitation and runoff is poorly understood. Here we use four Earth System Models to show that in a CO 2 -enriched climate, radiative forcing changes drive annual precipitation increases for most monsoon regions. Further, vegetation feedbacks substantially affect annual precipitation in North and South America and Australia monsoon regions. In the dry season, runoff increases over most monsoon regions, due to stomatal closure-driven evapotranspiration reductions and associated atmospheric circulation change. Our results imply that flood risks may amplify in the wet season. However, the lengthening of the monsoon rainfall season and reduced evapotranspiration will shorten the water resources scarcity period for most monsoon regions.

58 GEOSCIENCES↗

Structures of monomeric and dimeric PRC2:EZH1 reveal flexible modules involved in chromatin compaction

Polycomb repressive complex 2 (PRC2) is a histone methyltransferase critical for maintaining gene silencing during eukaryotic development. In mammals, PRC2 activity is regulated in part by the selective incorporation of one of two paralogs of the catalytic subunit, EZH1 or EZH2. Each of these enzymes has specialized biological functions that may be partially explained by differences in the multivalent interactions they mediate with chromatin. Here, we present two cryo-EM structures of PRC2:EZH1, one as a monomer and a second one as a dimer bound to a nucleosome. When bound to nucleosome substrate, the PRC2:EZH1 dimer undergoes a dramatic conformational change. We demonstrate that mutation of a divergent EZH1/2 loop abrogates the nucleosome-binding and methyltransferase activities of PRC2:EZH1. Finally, we show that PRC2:EZH1 dimers are more effective than monomers at promoting chromatin compaction, and the divergent EZH1/2 loop is essential for this function, thereby tying together the methyltransferase, nucleosome-binding, and chromatin-compaction activities of PRC2:EZH1. We speculate that the conformational flexibility and the ability to dimerize enable PRC2 to act on the varied chromatin substrates it encounters in the cell.

59 BASIC BIOLOGICAL SCIENCES↗

Conformational rearrangement of the NMDA receptor amino-terminal domain during activation and allosteric modulation

N-Methyl-D-aspartate receptors (NMDARs) are ionotropic glutamate receptors essential for synaptic plasticity and memory. Receptor activation involves glycine- and glutamate-stabilized closure of the GluN1 and GluN2 subunit ligand binding domains that is allosterically regulated by the amino-terminal domain (ATD). Using single molecule fluorescence resonance energy transfer (smFRET) to monitor subunit rearrangements in real-time, we observe a stable ATD inter-dimer distance in the Apo state and test the effects of agonists and antagonists. We find that GluN1 and GluN2 have distinct gating functions. Glutamate binding to GluN2 subunits elicits two identical, sequential steps of ATD dimer separation. Glycine binding to GluN1 has no detectable effect, but unlocks the receptor for activation so that glycine and glutamate together drive an altered activation trajectory that is consistent with ATD dimer separation and rotation. We find that protons exert allosteric inhibition by suppressing the glutamate-driven ATD separation steps, and that greater ATD separation translates into greater rotation and higher open probability.

59 BASIC BIOLOGICAL SCIENCES↗

Comprehensive deletion landscape of CRISPR-Cas9 identifies minimal RNA-guided DNA-binding modules

Proteins evolve through the modular rearrangement of elements known as domains. Extant, multidomain proteins are hypothesized to be the result of domain accretion, but there has been limited experimental validation of this idea. Here, we introduce a technique for genetic minimization by iterative size-exclusion and recombination (MISER) for comprehensively making all possible deletions of a protein. Using MISER, we generate a deletion landscape for the CRISPR protein Cas9. We find that the catalytically-dead Streptococcus pyogenes Cas9 can tolerate large single deletions in the REC2, REC3, HNH, and RuvC domains, while still functioning in vitro and in vivo, and that these deletions can be stacked together to engineer minimal, DNA-binding effector proteins. In total, our results demonstrate that extant proteins retain significant modularity from the accretion process and, as genetic size is a major limitation for viral delivery systems, establish a general technique to improve genome editing and gene therapy-based therapeutics.

59 BASIC BIOLOGICAL SCIENCES↗

Entropy and crystal-facet modulation of P2-type layered cathodes for long-lasting sodium-based batteries

Abstract P2-type sodium manganese-rich layered oxides are promising cathode candidates for sodium-based batteries because of their appealing cost-effective and capacity features. However, the structural distortion and cationic rearrangement induced by irreversible phase transition and anionic redox reaction at high cell voltage (i.e., >4.0 V) cause sluggish Na-ion kinetics and severe capacity decay. To circumvent these issues, here, we report a strategy to develop P2-type layered cathodes via configurational entropy and ion-diffusion structural tuning. In situ synchrotron X-ray diffraction combined with electrochemical kinetic tests and microstructural characterizations reveal that the entropy-tuned Na 0.62 Mn 0.67 Ni 0.23 Cu 0.05 Mg 0.07 Ti 0.01 O 2 (CuMgTi-571) cathode possesses more {010} active facet, improved structural and thermal stability and faster anionic redox kinetics compared to Na 0.62 Mn 0.67 Ni 0.37 O 2 . When tested in combination with a Na metal anode and a non-aqueous NaClO 4 -based electrolyte solution in coin cell configuration, the CuMgTi-571-based positive electrode enables an 87% capacity retention after 500 cycles at 120 mA g −1 and about 75% capacity retention after 2000 cycles at 1.2 A g −1 .

25 ENERGY STORAGE↗