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At least 1,639 records · Page 91

Mercury’s Chaotic Secular Evolution as a Subdiffusive Process

Abstract Mercury’s orbit can destabilize, generally resulting in a collision with either Venus or the Sun. Chaotic evolution can causeg 1 to decrease to the approximately constant value ofg 5 and create a resonance. Previous work has approximated the variation ing 1 as stochastic diffusion, which leads to a phenomological model that can reproduce the Mercury instability statistics of secular andN-body models on timescales longer than 10 Gyr. Here we show that the diffusive model significantly underpredicts the Mercury instability probability on timescales less than 5 Gyr, the remaining lifespan of the solar system. This is becauseg 1 exhibits larger variations on short timescales than the diffusive model would suggest. To better model the variations on short timescales, we build a new subdiffusive phenomological model forg 1 . Subdiffusion is similar to diffusion but exhibits larger displacements on short timescales and smaller displacements on long timescales. We choose model parameters based on the behavior of theg 1 trajectories in theN-body simulations, leading to a tuned model that can reproduce Mercury instability statistics from 1–40 Gyr. This work motivates fundamental questions in solar system dynamics: why does subdiffusion better approximate the variation ing 1 than standard diffusion? Why is there an upper bound ong 1 , but not a lower bound that would prevent it from reachingg 5 ?

Astronomy & Astrophysics↗

Status of New Models Hosted on the Virtual Test Bed (VTB) in 2024

The National Reactor Innovation Center (NRIC) mission is to support deployment of novel reactor concepts. This is achieved by providing physical and virtual spaces for building and testing various components, systems, and complete pilot plants. The Virtual Test Bed (VTB) represents the virtual counterpart to the physical test bed. It is in development in collaboration with the Department of Energy’s (DOE) Nuclear Energy Advanced Modeling and Simulation (NEAMS) program. The mission of the VTB is to accelerate the deployment and licensing of advanced reactors by leveraging state-of-the-art modeling and simulation (M&S) tools developed by the DOE NEAMS program. This is accomplished by three primary means: (1) openly hosting simulations that showcase analysis capabilities, (2) continuously testing the models hosted against code updates to avoid deprecation, and (3) filling key M&S gaps that are relevant for the physical NRIC test beds. The VTB repository consists of two sub-entities: 1. A documentation website detailing the models (https://mooseframework.inl.gov/virtual_test_bed). 2. A GitHub repository that hosts the corresponding files (https://github.com/idaholab/virtual_test_bed). Previous documentation on the models hosted in the VTB can be found in [1,2,3,4]. These references also include additional background information on the various NEAMS codes showcased in the VTB (which is omitted here for brevity). This paper primarily provides a status update of the most recent additions to the repository.

22 - GENERAL STUDIES OF NUCLEAR REACTORS↗

Lagrangian large eddy simulations via physics-informed machine learning

High-Reynolds number homogeneous isotropic turbulence (HIT) is fully described within the Navier–Stokes (NS) equations, which are notoriously difficult to solve numerically. Engineers, interested primarily in describing turbulence at a reduced range of resolved scales, have designed heuristics, known as large eddy simulation (LES). LES is described in terms of the temporally evolving Eulerian velocity field defined over a spatial grid with the mean-spacing correspondent to the resolved scale. This classic Eulerian LES depends on assumptions about effects of subgrid scales on the resolved scales. Here, we take an alternative approach and design LES heuristics stated in terms of Lagrangian particles moving with the flow. Our Lagrangian LES, thus L-LES, is described by equations generalizing the weakly compressible smoothed particle hydrodynamics formulation with extended parametric and functional freedom, which is then resolved via Machine Learning training on Lagrangian data from direct numerical simulations of the NS equations. The L-LES model includes physics-informed parameterization and functional form, by combining physics-based parameters and physics-inspired Neural Networks to describe the evolution of turbulence within the resolved range of scales. The subgrid-scale contributions are modeled separately with physical constraints to account for the effects from unresolved scales. We build the resulting model under the differentiable programming framework to facilitate efficient training. We experiment with loss functions of different types, including physics-informed ones accounting for statistics of Lagrangian particles. We show that our L-LES model is capable of reproducing Eulerian and unique Lagrangian turbulence structures and statistics over a range of turbulent Mach numbers.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Natural Gas Community of the Future (Final Report)

Nicor Gas, a subsidiary of Southern Company Gas and its parent company Southern Company, is developing the concept of the Carbon-neutral, Affordable, Resilient, and Equitable Community ("CARE Community") to address the challenges of accessibility and affordability of grid-interactive efficient buildings in historically disadvantaged communities. The CARE Community is a new construction net-zero energy and carbon neutral residential neighborhood consisting of 50 homes with electricity and natural gas services in South Suburban Chicago, built as low-income affordable housing. The National Renewable Energy Laboratory (NREL) is assisting Southern Company to explore how energy efficiency, renewable technologies, and the reliability and resilience of natural gas can be combined and optimized in an islandable energy system as part of a broader effort to understand the role natural gas plays in future communities integrated with renewable energy and improved energy efficiency. The CARE Community will demonstrate how energy efficiency, distributed energy resources (DERs), and advanced controls can be combined with existing natural gas infrastructure to serve historically disadvantaged communities in a cold climate with low energy cost for affordable housing programs and enhanced resilience to withstand extreme weather. Homes will be a part of an islandable energy system, integrating multiple DER technologies such as solar panels, natural gas fuel cells, reciprocating natural gas engines, and battery storage. The CARE Community will provide a replicable template that affordable housing developers and energy companies can adopt throughout the United States. In this report, we present the design and modeling of the community and potential approaches for integrating DERs. We analyze and discuss annual simulations under normal operating conditions and week-long simulations under electric power grid outage conditions.

03 NATURAL GAS↗

Mitigating urban heat island and enhancing indoor thermal comfort using terrace garden

The United Nations advocates for sustainable urban planning and design, emphasizing green infrastructure initiatives to mitigate urban heat island effects and enhance the resilience and livability of cities globally. To address urban heat challenges, a study was conducted in Chennai, India, from April to June 2023. The study focused on assessing temperature dynamics on a building's terrace by comparing a well-maintained garden area with an exposed region. Temperature and humidity sensors were deployed in both the garden and exposed areas of the terrace, as well as within rooms beneath it, to monitor hourly temperature fluctuations. The findings indicate a significant reduction in internal room temperatures in areas with rooftop gardens, ranging from 4 to 11 °C, depending on the time of year and sun's position, compared to rooms with fully exposed roof configurations. Additionally, simulation studies were performed to validate these findings, suggesting that optimizing the distribution of soil beds and plant density across the roof could yield an additional temperature reduction of 3–4 °C, resulting in an overall difference of up to 14–15 °C. The study highlights the efficacy of rooftop gardens in providing cooling effects during daylight hours and maintaining temperature parity post-sunset. Through analysis of sensor data, the research elucidates the intricate relationship between green infrastructure and thermal comfort, offering insights for energy-efficient building design and resilient urban planning. The findings underscore the potential of rooftop gardens in fostering a more comfortable, energy-efficient, and sustainable urban living environment.

54 ENVIRONMENTAL SCIENCES↗

The Quantum Nature of the Neutrino

Over the last 100 years we have learned much about the neutrino, but there remain interesting questions about this weakly interacting particle. In particular, at LLNL we are developing an experiment to measure the quantum nature of the neutrino. The 2015 long range plan recom mended tonne-scale neutrinoless double beta decay experiments as the top new project priority and this experiment will target the quantum nature of the neutrino. The LLNL team is motivated and focused on developing the best technology for this experiment which is a liquid xenon time projection chamber called nEXO. Work on nEXO at LLNL started in 2015 with an LDRD and program development funds to de velop the nEXO concept, publish sensitivity predictions, explore alternatives and risks, and to build a credible project team and this effort is on going. In addition, we received research funding from DOE-SC NP and LLNL manages pre-conceptual R&D for the nEXO collaboration a portion of which is executed at LLNL. LLNL has a long history of building large projects, science projects and time projection chambers, but nEXO is in fact the first project of this scale that LLNL is prepared to lead for DOE-SC NP. We have the tools, skills, people and motivation to make nEXO a reality. The current program devel opment dollars are used to prepare the nEXO concept for down select and CD1. These internal LLNL dollars pay for a number of things including project staff to organize the nEXO collaboration for the various reviews, to develop the draft plans and structure to manage the project as well as setting up external advisory committees. The DOE-SC NP base funding is targeted at simulation and analysis of the nEXO concept in preparation for the down select and refinement of the under standing of the detector as well as scientific effort on the large xenon test stand (LXTS) that will burn down one of the largest risks to the nEXO project. Lastly, LLNL is leading the pre-conceptual R&D effort and managing the funds for the nEXO collaboration. LLNL continues to build the best scientific team for nEXO and this year that includes adding Ethan Bernard to lead the efforts on the LXTS. We will also soon add a new postoc, Samuel Hedges, in the fall to the LLNL nEXO team. The effort this year was influenced by the portfolio review, and there were a number of scientific activities led by LLNL to prepare for this review. In addition, we again took a lead role on the new sensitivity paper as well as publishing a paper based analyzing the effects of skin xenon in nEXO. LLNL leads the software and analysis for the project and we continued work in this area as well. High voltage remains a significant risk for the project and we continue to make progress on the LXTS that will mitigate this risk. Lastly we remain active in looking at how to scale the technology to larger scales, and expect to produce a paper on this topic in the near future.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Short-wavelength-sensitive 2 (Sws2) visual photopigment models combined with atomistic molecular simulations to predict spectral peaks of absorbance

For many species, vision is one of the most important sensory modalities for mediating essential tasks that include navigation, predation and foraging, predator avoidance, and numerous social behaviors. The vertebrate visual process begins when photons of the light interact with rod and cone photoreceptors that are present in the neural retina. Vertebrate visual photopigments are housed within these photoreceptor cells and are sensitive to a wide range of wavelengths that peak within the light spectrum, the latter of which is a function of the type of chromophore used and how it interacts with specific amino acid residues found within the opsin protein sequence. Minor differences in the amino acid sequences of the opsins are known to lead to large differences in the spectral peak of absorbance (i.e. the λ max value). In our prior studies, we developed a new approach that combined homology modeling and molecular dynamics simulations to gather structural information associated with chromophore conformation, then used it to generate statistical models for the accurate prediction of λ max values for photopigments derived from Rh1 and Rh2 amino acid sequences. In the present study, we test our novel approach to predict the λ max of phylogenetically distant Sws2 cone opsins. To build a model that can predict the λ max using our approach presented in our prior studies, we selected a spectrally-diverse set of 11 teleost Sws2 photopigments for which both amino acid sequence information and experimentally measured λ max values are known. The final first-order regression model, consisting of three terms associated with chromophore conformation, was sufficient to predict the λ max of Sws2 photopigments with high accuracy. This study further highlights the breadth of our approach in reliably predicting λ max values of Sws2 cone photopigments, evolutionary-more distant from template bovine RH1, and provided mechanistic insights into the role of known spectral tuning sites.

59 BASIC BIOLOGICAL SCIENCES↗

Thermal Behavior During the Selective Laser Melting Process of Ti-6Al-4V Powder in the Point Exposure Scan Pattern

Currently, there are two main scan patterns, including the continuous exposure scan pattern and the point exposure scan pattern, during the selective laser melting (SLM) process. The point exposure scan pattern allows a three-dimensional (3-D) printer to build finer detail features as a static molten pool that is more stable than a dynamic one. However, there has been limited theoretical research on the thermal behavior characteristics during the process in the point exposure scan pattern. Therefore, in this study, the simulation of thermal behavior during SLM of Ti-6Al-4V powder in the point exposure scan pattern was performed. The temperature evolution behavior of different positions and the effects of exposure time on the temperature evolution behavior of different positions, temperature distributions, and dimensions of the molten pool were investigated. The results showed that the direct exposure position and unexposed position had significantly different temperature evolution behaviors under a given condition, and the changed exposure time had the greatest influence on the direct exposure position compared with unexposed position. Moreover, the thermal accumulation effect of a former exposure point on a later one decreased with increasing exposure time. In addition, with the increase of exposure time, the maximum temperature of the molten pool was enhanced and the surface morphology of the molten pool changed from an approximate ellipse to an approximate circle. Besides, the molten pool dimensions were found to increase with exposure time, which indicated that the exposure time played an important role in the stability of the molten pool and the metallurgical bonding in the process. Furthermore, the dimensions of the molten pool and metallurgical bonding in the cross-sectional view were obtained through experiments. Good agreement was obtained when comparing the simulated results with the experimental ones.

36 MATERIALS SCIENCE↗

Critical pitting temperature of selective laser melted 316L stainless steel: A mechanistic approach

In this work, the critical pitting temperature (CPT) of selective laser melted (SLM) 316 L stainless steel in 1.0 M NaCl was measured and compared with a commercial wrought alloy. Potentiostatic measurements determined a mean CPT value of 16 ± 0.7 °C, 27.5 ± 0.8 °C and 31 ± 1 °C for the wrought alloy, the SLM alloy normal to the build direction and parallel to the build direction, respectively. The lead-in pencil electrode technique was used to study the pit chemistry of the two alloys and to explain the higher CPT values observed for the SLM alloy. A lower critical current density required for passivation in a simulated pit solution was measured for the SLM alloy. Moreover, the ratio of the critical concentration to saturated concentration of dissolving metal cations was found to be higher for the SLM alloy, which was related to its different salt film properties, possibly as a result of the SLM’s distinct microstructure.

36 MATERIALS SCIENCE↗

The cosmic web around the Coma cluster from constrained cosmological simulations

Galaxy clusters in the Universe occupy the important position of nodes of the cosmic web. They are connected among them by filaments, elongated structures composed of dark matter, galaxies, and gas. The connection of galaxy clusters to filaments is important, as it is related to the process of matter accretion onto the former. For this reason, investigating the connections to the cosmic web of massive clusters, especially well-known ones for which a lot of information is available, is a hot topic in astrophysics. In a previous work, we performed an analysis of the filament connections of the Coma cluster of galaxies, as detected from the observed galaxy distribution. In this work we resort to a numerical simulation whose initial conditions are constrained to reproduce the local Universe, including the region of the Coma cluster to interpret our observations in an evolutionary context. We detect the filaments connected to the simulated Coma cluster and perform an accurate comparison with the cosmic web configuration we detect in observations. We perform an analysis of the halos’ spatial and velocity distributions close to the filaments in the cluster outskirts. We conclude that, although not significantly larger than the average, the flux of accreting matter on the simulated Coma cluster is significantly more collimated close to the filaments with respect to the general isotropic accretion flux. This paper is the first example of such a result and the first installment in a series of publications which will explore the build-up of the Coma cluster system in connection to the filaments of the cosmic web as a function of redshift.

79 ASTRONOMY AND ASTROPHYSICS↗

Evolution of DUNE’s Production System

The DUNE experiment will start running in 2029 and record 30 PB/year of raw waveforms from Liquid Argon TPCs and photon detectors. The size of individual readouts can range from 100 MB to a typical 8 GB full readout of the detector, and even 100 TB for extended readouts from supernova candidates. These data then need to be cataloged, stored and distributed for processing worldwide. This massive amount of data and a heterogeneous computing environment necessitates a powerful and robust distributed computing infrastructure. In the process of building up that infrastructure, DUNE’s production system has recently undergone an overhaul, in which it has integrated 1) a new workflow management system (justIN) 2) a new data catalog (MetaCat) and 3) a state-of-the-art data management system (Rucio). Simulations of DUNE’s Far Detector and its prototypes ProtoDUNE Horizontal Drift (ProtoDUNE-HD) and ProtoDUNE Vertical Drift (ProtoDUNE-VD), as well as data from ProtoDUNE-HD serve as the first tests of this infrastructure.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

A plano–convex thick-lens velocity map imaging apparatus for direct, high resolution 3D momentum measurements of photoelectrons with ion time-of-flight coincidence

Since their inception, velocity map imaging (VMI) techniques have received continued interest in their expansion from 2D to 3D momentum measurements through either reconstructive or direct methods. Recently, much work has been devoted to the latter of these by relating electron time-of-flight (TOF) to the third momentum component. The challenge is having a timing resolution sufficient to resolve the structure in the narrow (<10 ns) electron TOF spread. Here, we build upon the work in VMI lens design and 3D VMI measurement by using a plano–convex thick-lens (PCTL) VMI in conjunction with an event-driven camera (TPX3CAM) providing TOF information for high resolution 3D electron momentum measurements. We perform simulations to show that, with the addition of a mesh electrode to the thick-lens geometry, the resulting plano–convex electrostatic field extends the detectable electron cutoff energy range while retaining the high resolution. This design also extends the electron TOF range, allowing for a better momentum resolution along this axis. We experimentally demonstrate these capabilities by examining above-threshold ionization in xenon, where the apparatus is shown to collect electrons of energy up to ∼7 eV with a TOF spread of ∼30 ns, both of which are improved compared to a previous work by factors of ∼1.4 and ∼3.75, respectively. Finally, the PCTL-VMI is equipped with a coincident ion TOF spectrometer, which is shown to effectively extract unique 3D momentum distributions for different ionic species in a gas mixture. These techniques have the potential to lend themselves to more advanced measurements involving systems where the electron momentum distributions possess non-trivial symmetries.

Instruments & Instrumentation↗

Ferromagnetic resonance in single vertices and 2D lattices macro-dipoles of elongated nanoelements: measurements and simulations

We report broadband ferromagnetic resonance measurements of the in-plane magnetic field response of three- and four-fold symmetric vertices formed by non-contacting permalloy nano-ellipses together with extended lattices constructed from them. Complementing the experimental data with simulations, we are able to show that, as far as the most intense FMR responses are concerned, the spectra of vertices and lattices can largely be interpreted in terms of a superposition of the underlying hysteretic responses of the individual ellipses, as elemental building blocks of the system. Here, this property suggest that it is possible to understand the orientation of the individual magnetic dipole moments in a dipole network in terms of dynamic measurements alone, thereby offering a powerful tool to analyze the alignment statistics in frustrated systems that are exposed to various magnetic histories.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

CryoTEN: efficiently enhancing cryo-EM density maps using transformers

Abstract Motivation Cryogenic electron microscopy (cryo-EM) is a core experimental technique used to determine the structure of macromolecules such as proteins. However, the effectiveness of cryo-EM is often hindered by the noise and missing density values in cryo-EM density maps caused by experimental conditions such as low contrast and conformational heterogeneity. Although various global and local map-sharpening techniques are widely employed to improve cryo-EM density maps, it is still challenging to efficiently improve their quality for building better protein structures from them. Results In this study, we introduce CryoTEN—a 3D UNETR++ style transformer to improve cryo-EM maps effectively. CryoTEN is trained using a diverse set of 1295 cryo-EM maps as inputs and their corresponding simulated maps generated from known protein structures as targets. An independent test set containing 150 maps is used to evaluate CryoTEN, and the results demonstrate that it can robustly enhance the quality of cryo-EM density maps. In addition, automatic de novo protein structure modeling shows that protein structures built from the density maps processed by CryoTEN have substantially better quality than those built from the original maps. Compared to the existing state-of-the-art deep learning methods for enhancing cryo-EM density maps, CryoTEN ranks second in improving the quality of density maps, while running >10 times faster and requiring much less GPU memory than them. Availability and implementation The source code and data are freely available at https://github.com/jianlin-cheng/cryoten.

Biochemistry & Molecular Biology↗

Establishing Models for Digital Twin of Hydropower Systems Using Probability Density Function Shaping

This paper introduces a digital twin modeling method for hydropower systems with Kaplan turbines using probability density function (PDF) shaping. We first use multilayer perceptron (MLP) model to build the discretized openloop Kaplan unit, where the MLP is trained by historical data. Then we use a proportional integral double derivative (PIDD) controller and a lead-lag exciter to test the obtained digital twin model in a closed-loop fashion. Simulation results show that the proposed digital twin modeling method can accurately capture the dynamics of the Kaplan hydropower unit. Finally, we show that the obtained digital twin can help to optimize the PIDD parameters. Compared with the original PIDD controller, the optimized one can achieve an over 90% improvement on the mean square tracking error.

Yin, Zhun [New York University]↗

Cabana: A Performance Portable Library for Particle-Based Simulations

Particle-based simulations are ubiquitous throughout many fields of computational science and engineering, spanning the atomistic level with molecular dynamics (MD), to mesoscale particle-in-cell (PIC) simulations for solid mechanics, device-scale modeling with PIC methods for plasma physics, and massive N-body cosmology simulations of galaxy structures, with many other methods in between (Hockney & Eastwood, 1989). While these methods use particles to represent significantly different entities with completely different physical models, many low-level details are shared including performant algorithms for short- and/or long-range particle interactions, multi-node particle communication patterns, and other data management tasks such as particle sorting and neighbor list construction. Cabana is a performance portable library for particle-based simulations, developed as part of the Co-Design Center for Particle Applications (CoPA) within the Exascale Computing Project (ECP) (Alexander et al., 2020). The CoPA project and its full development scope, including ECP partner applications, algorithm development, and similar software libraries for quantum MD, is described in (Mniszewski et al., 2021). Cabana uses the Kokkos library for on-node parallelism (Edwards et al., 2014; Trott et al., 2022), enabling simulation on multi-core CPU and GPU architectures, and MPI for GPU-aware, multi-node communication. Cabana provides particle simulation capabilities on almost all current Kokkos backends, including serial execution, OpenMP (including OpenMP-Target for GPUs), CUDA (NVIDIA GPUs), HIP (AMD GPUs), and SYCL (Intel GPUs), providing a clear path for the coming generation of accelerator-based exascale hardware. Cabana builds on Kokkos by providing new particle data structures and particle algorithms resulting in a similar execution policy-based, node-level programming model that is intended to be used in addition to the core Kokkos library within an application. Cabana is designed as an application and physics agnostic, but particle-specific toolkit which can either be used to generate a new application, or to be used as needed in existing applications at various levels of invasiveness including through interfaces that wrap user memory in existing data structures.

97 MATHEMATICS AND COMPUTING↗

pynucastro: A Python Library for Nuclear Astrophysics

We describe pynucastro 2.0, an open-source library for interactively creating and exploring astrophysical nuclear reaction networks. We demonstrate new methods for approximating rates and use detailed balance to create reverse rates, show how to build networks and determine whether they are appropriate for a particular science application, and discuss the changes made to the library over the past few years. Finally, we demonstrate the validity of the networks produced and share how we use pynucastro networks in simulation codes.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Infrastructure improvements in the National Reactor Innovation Center Virtual Test Bed

The National Reactor Innovation Center’s (NRIC) mission is to support deployment of novel reactor concepts. This is achieved by providing physical and virtual spaces for building and testing various components, systems, and complete pilot plants. The Virtual Test Bed (VTB) represents the virtual counterpart to the physical test bed. The VTB is being developed in collaboration with the Department of Energy’s (DOE) Nuclear Energy Advanced Modeling and Simulation (NEAMS) program. The mission of the VTB is to accelerate the deployment and licensing of advanced reactors by leveraging state-of-the-art modeling and simulation (M&S) tools developed by the DOE NEAMS program. This is accomplished via three primary means: (1) openly hosting simulations that showcase analysis capabilities, (2) continuously testing the models hosted against code updates to avoid deprecation, and (3) filling key M&S gaps that are relevant for the physical NRIC test beds. The VTB repository consists of two sub-entities: • A documentation website detailing the models: https://mooseframework.inl.gov/virtual_test_bed • A GitHub repository that hosts the corresponding files: https://github.com/idaholab/virtual_test_bed. This paper presents the infrastructure added to the VTB in the last two fiscal years. Additional information about the VTB can be found in various publications [1, 2, 3, 4, 5, 6, 7, 8].

22 - GENERAL STUDIES OF NUCLEAR REACTORS↗