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At least 1,621 records · Page 90

Investigating the Present Day Cosmic Dust Flux at the Earth's Surface: Initial Results from the Kwajalein Micrometeorite Collection

Examination of impact craters on the Long Duration Exposure Facility satellite indicate a present day micrometeoroid flux of approx. 30,000 tonnes [1 after 2]. But what portion of this material arrives at the Earth's surface as micrometeorites? Studies of available micrometeorite collections from deep sea sediments [e.g. 3], Greenland blue ice [e.g. 4] and the South Pole water well [e.g. 1] may be complicated by terrestrial weathering and, in some cases, collection bias (magnetic separation for deep sea sediments) and poorly constrained ages. We have recently set up a micrometeorite collection station on Kwajalein Island in the Republic of the Marshall Islands in the Pacific Ocean, using high volume air samplers to collect particles directly from the atmosphere. By collecting in this way, the terrestrial age of the particles is known, the weathering they experience is minimal, and we are able to constrain particle arrival times. Collecting at this location also exploits the considerably reduced anthropogenic background [5]. Method: High volume air samplers were installed on top of the two-story airport building on Kwajalein. These were fitted with polycarbonate membrane filters with 5μm diameter perforations. The flow rates were set to 0.5m3/min, and filters were changed once a week. After collection, filters were washed to remove salt and concentrate particles [see 5] in preparation for analysis by SEM. Results and Discussion: A selection of filters have been prepared and surveyed. Due to their ease of identification our initial investigations have focused on particles resembling cosmic spherules. The spheres can be divided into three main groups: 1. Silicate spherules rich in Al, Ca, K and Na (to varying degrees), 2. Silicate spherules rich in Mg and Fe and 3. Fe-rich spherules. Group 1 spherules are often vesiculated and can occur as aggregates. They are similar in appearance and composition to volcanic microspheres [e.g. 6] and are thus likely terrestrial in origin (volcanic). Those of groups 2 and 3, however, typically exhibit quenched surface textures consistent with cosmic spherules. Initial results suggest there is significant variation in the abundance of these groups from filter to filter. Work is ongoing to fully characterize these spherules and to constrain their flux with time.

Wozniakiewicz, P. J.↗

Automated Testcase Generation for Numerical Support Functions in Embedded Systems

We present a tool for the automatic generation of test stimuli for small numerical support functions, e.g., code for trigonometric functions, quaternions, filters, or table lookup. Our tool is based on KLEE to produce a set of test stimuli for full path coverage. We use a method of iterative deepening over abstractions to deal with floating-point values. During actual testing the stimuli exercise the code against a reference implementation. We illustrate our approach with results of experiments with low-level trigonometric functions, interpolation routines, and mathematical support functions from an open source UAS autopilot.

Metrics↗

Application of Swept-Sine Excitation for Acoustic Impedance Education

The NASA Langley Normal Incidence Tube (NIT) and Grazing Flow Impedance Tube (GFIT) are regularly employed to characterize the frequency response of acoustic liners through the eduction of their specific acoustic impedance. Both test rigs typically use an acoustic source that produces sine wave signals at discrete frequencies (Stepped-Sine) to educe the impedance. The current work details a novel approach using frequency-swept sine waveforms normalized to a constant sound pressure level for excitation. Determination of the sound pressure level and phase from microphone measurements acquired using swept-sine excitation is performed using a modified Vold-Kalman order tracking filter. Four acoustic liners are evaluated in the NIT and GFIT with both stepped-sine and swept-sine sources. Using these two methods, the educed impedance spectra are shown to compare favorably. However, the new (Swept-Sine) approach provides much greater frequency resolution in less time, allowing the acoustic liner properties to be studied in much greater detail.

Howerton, Brian M.↗

Method Development for In-situ Detection of Latent Herpesvirus DNA from Saliva using Nanopore Sequencing

Research toward latent herpesvirus reactivation has been intensively addressed through Space Shuttle and International Space Station (ISS) investigations. This work has provided the understanding that persistent reactivation of herpesviruses from asymptomatic crew can be detected through viral shedding in saliva, urine, and blood. Occasionally, viral reactivation from the latency stage can pose a threat to crew health (clinical manifestation) before, during, and after flight missions. Furthermore, previous work detailing correlations with immunity indicate that monitoring viral reactivation could be implemented to assess potential immune dysfunction. While in-flight monitoring is desirable, there is no well-established procedure or method for real-time evaluations, and research to date has relied on postflight, ground-based analysis. The development of portable molecular technologies like the miniPCR™ (miniPCR Bio) thermal cycler and the MinION™ sequencer (Oxford Nanopore Technologies) have confirmed that real-time monitoring is possible in extreme and low resource environments. These devices, combined with simple sample preparation methods, have been used to demonstrate bacterial identification onboard the ISS, as well as rapid viral detection in remote locations on Earth. The work here builds upon previous molecular advancements onboard the ISS toward the development and validation of a spaceflight-compatible method for viral detection from crew samples. Several herpesviruses can be detected in saliva, which provides a non-invasive means to collect samples for monitoring. While the basis for this method lies in previous spaceflight investigations, key points for method optimization include DNA extraction from saliva, viral primer selection, and bioinformatic processes for data analysis. To increase viral yield, numerous DNA extraction methods have been evaluated and will be discussed in detail. For initial development and testing, varicella-zoster virus (VZV) is being targeted though open reading frame 51 and 63 (ORF51, ORF63), as the replication origin-binding protein is highly expressed during latency. Optimization of the thermal cycling parameters has resulted in the ability to test the entire process. The full method has been tested with both viral VZV DNA standards and saliva spiked with varying concentrations of VZV. Viral sequence data were mapped to the reference sequence using minimap2. Prior to mapping, DNA sequencing reads were filtered for length and quality, barcodes were removed, and alignment identity calculated. Following further assessments, statistics were compared across multiple sequencing experiments and are being used to determine the success of the protocols. Forward work will include the incorporation of herpes simplex virus 1 (HSV-1) and Epstein-Barr virus (EBV) primers as well as the validation of results to the terrestrial qPCR standard assay. Upon full validation of the developed method, saliva will be collected from 20 healthy subjects and spiked with viral DNA. These samples will be split and assayed with the MinION and standard qPCR assay.

Hang N Nguyen↗

Gust Load Alleviation Control and Gust Estimation for a High Aspect Ratio Wing Wind Tunnel Model

This paper presents the gust load alleviation (GLA) study of the aspect ratio 13.5 Common Research Model (CRM) wind-tunnel model. This study details the design of the GLA controller in preparation for wind-tunnel testing in the Transonic Dynamics Tunnel at NASA Langley Research Center. An aeroservolastic (ASE) model was first reduced using a model reduction method that takes advantage of the sinusoidal steady-state response. Then, the reduced model was used to design an extended-state Kalman filter which estimates the states and the sinusoidal gust input. The GLA control was then derived using the optimal control solution to a multi-objective cost function. The results of the GLA controller indicate a 75.6% reduction in wing-root strain while maintaining robust stability margins. The final paper will include performance under sub-optimal conditions, e.g., sensor noise, uncertainty in gust frequency, etc..

Christopher Forte↗

Gust Load Alleviation Control and Gust Estimation for a High Aspect Ratio Wing Wind Tunnel Model

This paper presents the gust load alleviation (GLA) study of the aspect ratio 13.5 Common Research Model (CRM) wind-tunnel model. This study details the design of the GLA controller in preparation for wind-tunnel testing in the Transonic Dynamics Tunnel at NASA Langley Research Center. An aeroservolastic (ASE) model is first reduced using a model reduction method that takes advantage of the sinusoidal steady-state response. Then, the reduced model is used to design an extended-state Kalman filter which estimates the states and the sinusoidal gust input. The GLA control is then derived using the optimal control solution to a multi-objective cost function. The results of the GLA controller indicate a 69.07% reduction in wing-root strain without sensor noise and 68.45% reduction with sensor noise, while maintaining robust stability margins. An adaptive GLA controller is developed for uncertain gust frequency and shows a 71.03% reduction in wing root strain compared to the non-adaptive control reduction of just 39.19%.

Christopher Forte↗

Mass Spectrometer Observing Lunar Operations (MSoLo)

Introduction: In 2019, the National Aeronautics and Space Administration (NASA) announced that it would seek to have humans return to the moon by 2024 in the hopes of establishing a more sustainable lunar presence by 2028. This goal comes with many challenges, one of upmost importance will be to utilize resources that can be found on the moon. Water, which has been identified in the lunar Polar Regions, will be a key resource for in-situ resource utilization (ISRU), as it is capable of being processed for vehicular fuel, as well as life support systems materials such as oxygen. Upcoming Commercial Lunar Payload Services (CLPS) missions will be critical for these resource assessments. Methods: A modified commercial off-the-shelf (COTS) mass spectrometer developed at Kennedy Space Center known as MSolo, consisting of a quadrupole mass filter and space rated electronics undergoes testing and modifications in order to study operational parameters to unconventional approaches needed in flight situations. In general, MSolo operates in the 0-100 m/z range with the ability to detect with a faraday cup (FC) or an electron multiplier (EM) for enhanced detection. A crossbeam (XB) ionization source is used. Preliminary Data: Prior to construction, little information was available on how the MSolo system would perform at lunar like environments, factors such as temperatures (possible fluctuations from 70 to -45 °C), vibrations from launch and their side effects, the general ability to operate while the entire system (hardware and electronic components) were in a vacuum environment, were factors that while know to flight instruments, were something new to a modified COTS system. As components start to warm up, temperature becomes a key factor (ie. heat can no longer escape the electronics as no atmosphere is present), therefore it becomes crucial to find new ways to maintain stable signals and keep the instrument tuned. Calibration itself becomes an important parameter that needs to be performed while maintaining all flight like characteristics. Even the structure itself of MSolo’s sensor needed to be changed to survive the verification parameters needed to be approved for flight. Most important, all the modifications made to the COTS system have to keep the instrument working at the same specifications of the standard commercial systems. Novel Aspect: Results gathered provide key parameters that will assist to the unconventional mass spectrometry approaches of the upcoming CLPS missions to which MSolo has been selected to.

MSolo↗

ZTF-SEDm Type Ia supernova sample for Twins Embedding spectrophotometric standardization

Aims. This paper has two aims: the first aim is to build a large homogeneous spectrophotometric sample of Type Ia supernovae (SNe Ia) from the second data release of the Zwicky Transient Facility (ZTF DR2). We used the spectrum sample from the low-resolution ( R ∼ 100) SEDmachine (SEDm) Integral Field Spectrograph (IFS) that gathered 3069 spectra. This is one of the largest samples of such collections that can attempt to reproduce the Twins Embedding (TE) spectrophotometric standardization method. This is our second objective. The method was developed based on high-quality spectra from 200 SNe Ia of the Nearby Supernova factory (SNfactory) and led to an exceptionally low value of 0.073 mag for the intrinsic scatter. Methods. As the SEDm is not designed as a spectrophotometric instrument, we first improved the flux-calibration accuracy of the SN Ia spectrum sample using the ZTF photometric data, which were calibrated at the percent level. We corrected the spectra for second-order polynomials, fitted by comparing the synthetic photometry in the ZTF g , r , i filters with the light-curve (LC) data. We then applied the three steps of the TE parameterization to a subset of 783 ZTF SN spectra near maximum light while comparing results from SNfactory and ZTF. We finally analyzed the standardization methods based on the TE parameters. Results. The precision of the phase-correction model, which is the first step of the TE, is estimated at 0.01 mag in g band based on ZTF data. Despite the challenge posed by the spectrum-extraction pipeline associated with the SEDm (flux calibration, leftover host signal, low signal-to-noise ratio, and low resolution), we applied a first standardization in color based on the second step of the TE, called read between the lines (RBTL), to the ZTF sample. We reached a Hubble residual scatter of 0.153 mag, all in normalized median absolute deviation, which is to be compared to the ∼0.11 mag obtained with the SNfactory data. The SALT color and stretch standardization reaches a scatter of 0.164 mag for the same ZTF SN Ia sample, and its host steps are ∼0.1 mag and zero for RBTL. When considering the scatter due to the redshift error and flux calibration error, we estimated a RBTL scatter of ∼0.129 mag for this ZTF sample as an upper limit because we identified an additional contribution from a systematic error in color. We tested the standardization based on the nonlinear TE parameters, and, as expected from the low spectrum quality, it did not improve the overall dispersion. Conclusions. We release 1897 flux calibrated spectra of 1607 SNe Ia with an estimated photometric accuracy of 0.07 mag. We further demonstrate that some amount of spectrophotometric SN Ia standardization can be done with limited-quality spectra. The RBTL standardization is more efficient than that of SALT with one parameter less, and the resulting host steps are consistent with zero. This makes it less prone to astrophysical bias. For future spectroscopic surveys, targeting the extraction pipeline for a thorough flux calibration and good signal-to-noise ratio would enable us to compute the full TE standardization, which would further reduce the scatter in the distance estimate.

Ganot, C↗

Multifrequency Ultra-High Resolution Miniature Scanning Microscope Using Microchannel And Solid-State Sensor Technologies And Method For Scanning Samples

A miniature, ultra-high resolution, and color scanning microscope using microchannel and solid-state technology that does not require focus adjustment. One embodiment includes a source of collimated radiant energy for illuminating a sample, a plurality of narrow angle filters comprising a microchannel structure to permit the passage of only unscattered radiant energy through the microchannels with some portion of the radiant energy entering the microchannels from the sample, a solid-state sensor array attached to the microchannel structure, the microchannels being aligned with an element of the solid-state sensor array, that portion of the radiant energy entering the microchannels parallel to the microchannel walls travels to the sensor element generating an electrical signal from which an image is reconstructed by an external device, and a moving element for movement of the microchannel structure relative to the sample. Discloses a method for scanning samples whereby the sensor array elements trace parallel paths that are arbitrarily close to the parallel paths traced by other elements of the array.

Wang, Yu↗

Sampling Microbial Dynamics in the Salish Sea Estuary: Evaluating Methods to Capture Cyanobacteria and Cyanophage

Introduction: Picocyanobacteria from the genera Prochlorococcus and Synechococcus thrive across the globe in aquatic environments, have relatively small genomes, and have growth dynamics regulated by both viral interactions and abiotic conditions, making them excellent model organisms for exploring host-pathogencoevolution. Methods: We developed and refined methods to sample and sequence cyanobacteria, cyanophages, and measured features of their abiotic environment. Results: The protocol described herein can successfully discriminate large-cell eukaryotic organisms, but size fractionation of picocyanobacteria appears to be affected by the presence of free DNA, multicellular structures, and abundant tycheposons. Our preferred final protocol from this exploratory effort included a combination of in-line and single vacuum flask filtrations, which reduced filtration processing time by over threefold in some cases compared to other tested methods, such as a fully in-line sequence or in-site filtrations. We successfully extracted an average of approximately 400–1200 ng for all filter fractions, with some variations between kits. Discussion: The protocol described herein can successfully discriminate large-cell eukaryotic organisms, but size fractionation of picocyanobacteria appears to be affected by the presence of free DNA, multicellular structures, and abundant tycheposons.

Salish Sea↗

Vibration analysis using digital correlation

This paper demonstrates the use of a computer-based optical method for locating the positions of nodes and antinodes in vibrating members. Structured light patterns are projected at an angle onto the vibrating surface using a 35 mm slide projector. The vibrating surface and the projected images are captured in a time averaged photograph which is subsequently digitized. The inherent fringe patterns are filtered to determine amplitudes of vibration, and computer programs are used to compare the time averaged images to images recorded prior to excitation to locate nodes and antinodes. Some of the influences of pattern regularity on digital correlation are demonstrated, and a speckle-based method for determining the mode shapes and the amplitudes of vibration with variable sensitivity is suggested.

Gilbert, John A.↗

MVP: a modular viromics pipeline to identify, filter, cluster, annotate, and bin viruses from metagenomes

While numerous computational frameworks and workflows are available for recovering prokaryote and eukaryote genomes from metagenome data, only a limited number of pipelines are designed specifically for viromics analysis. With many viromics tools developed in the last few years alone, it can be challenging for scientists with limited bioinformatics experience to easily recover, evaluate quality, annotate genes, dereplicate, assign taxonomy, and calculate relative abundance and coverage of viral genomes using state-of-the-art methods and standards. Here, we describe Modular Viromics Pipeline (MVP) v.1.0, a user-friendly pipeline written in Python and providing a simple framework to perform standard viromics analyses. MVP combines multiple tools to enable viral genome identification, characterization of genome quality, filtering, clustering, taxonomic and functional annotation, genome binning, and comprehensive summaries of results that can be used for downstream ecological analyses. Overall, MVP provides a standardized and reproducible pipeline for both extensive and robust characterization of viruses from large-scale sequencing data including metagenomes, metatranscriptomes, viromes, and isolate genomes. As a typical use case, we show how the entire MVP pipeline can be applied to a set of 20 metagenomes from wetland sediments using only 10 modules executed via command lines, leading to the identification of 11,656 viral contigs and 8,145 viral operational taxonomic units (vOTUs) displaying a clear beta-diversity pattern. Further, acting as a dynamic wrapper, MVP is designed to continuously incorporate updates and integrate new tools, ensuring its ongoing relevance in the rapidly evolving field of viromics. MVP is available at https://gitlab.com/ccoclet/mvp and as versioned packages in PyPi and Conda.

59 BASIC BIOLOGICAL SCIENCES↗

Remote sensing detection enhancement

Big Data in the area of Remote Sensing has been growing rapidly. Remote sensors are used in surveillance, security, traffic, environmental monitoring, and autonomous sensing. Real-time detection of small moving targets using a remote sensor is an ongoing, challenging problem. Since the object is located far away from the sensor, the object often appears too small. The object’s signal-to-noise-ratio (SNR) is often very low. Occurrences such as camera motion, moving backgrounds (e.g., rustling leaves), low contrast and resolution of foreground objects makes it difficult to segment out the targeted moving objects of interest. Due to the limited appearance of the target, it is tough to obtain the target’s characteristics such as its shape and texture. Without these characteristics, filtering out false detections can be a difficult task. Detecting these targets, would often require the detector to operate under a low detection threshold. However, lowering the detection threshold could lead to an increase of false alarms. In this paper, the author will introduce a new method that improves the probability to detect low SNR objects, while decreasing the number of false alarms as compared to using the traditional baseline detection technique.

47 OTHER INSTRUMENTATION↗

Mathematical Characterization of Battery Models

The purpose of this document is to demonstrate the use of the Extended Kalman Filter as a tool for battery state estimation and the estimation of battery state of charge. The mathematical details based on the equivalent circuit model are presented followed by an electrochemical engineering model. A simplified first-order model is used to demonstrate the procedure followed by second and third-order models. Next a simplified electrochemistry model is presented along with observer development. State observability is calculated for the simpler equivalent circuit models and the simplified electrochemistry model. An outline of the battery model parameter identification method is presented, and model performance based on experimental and flight data is demonstrated.

Battery↗

Comparison of TOPEX/Poseidon orbit determination solutions obtained by the Goddard Space Flight Center Flight Dynamics Division and Precision Orbit Determination Teams

Orbit determination results are obtained by the Goddard Space Flight Center (GSFC) Flight Dynamics Division (FDD) using the Goddard Trajectory Determination System (GTDS) and a real-time extended Kalman filter estimation system to process Tracking Data and Relay Satellite (TDRS) System (TDRSS) measurements in support of the Ocean Topography Experiment (TOPEX)/Poseidon spacecraft navigation and health and safety operations. GTDS is the operational orbit determination system used by the FDD, and the extended Kalman fliter was implemented in an analysis prototype system, the Real-Time Orbit Determination System/Enhanced (RTOD/E). The Precision Orbit Determination (POD) team within the GSFC Space Geodesy Branch generates an independent set of high-accuracy trajectories to support the TOPEX/Poseidon scientific data. These latter solutions use the Geodynamics (GEODYN) orbit determination system with laser ranging tracking data. The TOPEX/Poseidon trajectories were estimated for the October 22 - November 1, 1992, timeframe, for which the latest preliminary POD results were available. Independent assessments were made of the consistencies of solutions produced by the batch and sequential methods. The batch cases were assessed using overlap comparisons, while the sequential cases were assessed with covariances and the first measurement residuals. The batch least-squares and forward-filtered RTOD/E orbit solutions were compared with the definitive POD orbit solutions. The solution differences were generally less than 10 meters (m) for the batch least squares and less than 18 m for the sequential estimation solutions. The differences among the POD, GTDS, and RTOD/E solutions can be traced to differences in modeling and tracking data types, which are being analyzed in detail.

Doll, C.↗

Analysis of filter tuning techniques for sequential orbit determination

This paper examines filter tuning techniques for a sequential orbit determination (OD) covariance analysis. Recently, there has been a renewed interest in sequential OD, primarily due to the successful flight qualification of the Tracking and Data Relay Satellite System (TDRSS) Onboard Navigation System (TONS) using Doppler data extracted onboard the Extreme Ultraviolet Explorer (EUVE) spacecraft. TONS computes highly accurate orbit solutions onboard the spacecraft in realtime using a sequential filter. As the result of the successful TONS-EUVE flight qualification experiment, the Earth Observing System (EOS) AM-1 Project has selected TONS as the prime navigation system. In addition, sequential OD methods can be used successfully for ground OD. Whether data are processed onboard or on the ground, a sequential OD procedure is generally favored over a batch technique when a realtime automated OD system is desired. Recently, OD covariance analyses were performed for the TONS-EUVE and TONS-EOS missions using the sequential processing options of the Orbit Determination Error Analysis System (ODEAS). ODEAS is the primary covariance analysis system used by the Goddard Space Flight Center (GSFC) Flight Dynamics Division (FDD). The results of these analyses revealed a high sensitivity of the OD solutions to the state process noise filter tuning parameters. The covariance analysis results show that the state estimate error contributions from measurement-related error sources, especially those due to the random noise and satellite-to-satellite ionospheric refraction correction errors, increase rapidly as the state process noise increases. These results prompted an in-depth investigation of the role of the filter tuning parameters in sequential OD covariance analysis. This paper analyzes how the spacecraft state estimate errors due to dynamic and measurement-related error sources are affected by the process noise level used. This information is then used to establish guidelines for determining optimal filter tuning parameters in a given sequential OD scenario for both covariance analysis and actual OD. Comparisons are also made with corresponding definitive OD results available from the TONS-EUVE analysis.

Lee, T.↗

Central Compact Finite‐Difference Scheme With High Spectral Resolution for KdV Equation

This work presents a combination of cell‐node and cell‐centered compact finite difference scheme for the approximation of third derivatives involved in Korteweg–de Vries (KdV) equations. This approach employs a half‐shifted derivative construction at cell centers, avoiding the need for compact interpolation, thereby removing transfer errors; hence, it improves spectral resolution and maintains high‐order accuracy. Fourier analysis is performed to show the spectral properties of the proposed formulation, which provides higher spectral resolutions as compared to node‐based compact schemes. A filtering strategy is incorporated to suppress high‐frequency oscillations without compromising the accuracy of the numerical scheme, and the total variation diminishing Runge Kutta (TVDRK3) method is applied for time integration. Numerical experiments on linear, nonlinear, and coupled KdV systems are conducted, and a comparative analysis with cell‐node compact schemes confirms that the proposed scheme consistently reduces errors by up to an order of magnitude and achieves high spectral resolution properties.

97 MATHEMATICS AND COMPUTING↗