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NASA NTRSDate not supplied

Graph Convolutional Network-Strengthened Topic Modeling for Scientific Papers

Machine learning has been woven into statistics to modernize topic modeling over textual documents written in natural language, and scientific paper search and recommendation can consequently offer higher accuracy instead of counting on traditional keyword-based search. However, topic distribution of a paper resulted from existing topic modeling techniques only relies on the statistics of words contained in the paper itself. We argue that community users’ views of a paper may also provide insights at the time of recommendation. For example, if a paper on fake image detection has been cited heavily by machine learning papers, such a feature should be absorbed in the embedding of this paper, so that it can be recommended for future query on machine learning. In this paper, we present a Graph Convolutional Network-strengthened Topic Modeling (GCN-TM) method, which employs GCN technique to refine topic modeling of scientific papers. A citation-oriented knowledge graph is constructed, and topic modeling is mapped to feature embedding of the comprising papers. On top of its own topics carried in its content, each paper learns topics from its neighbors and revise its embedding accordingly. Our empirical studies over real-life scientific literature has proved the necessity and effectiveness of our proposed approach.

Jia Zhang↗

NASA NTRS2024

Eddy-Mediated Turbulent Mixing of Oxygen in the Equatorial Pacific

In the tropical Pacific, weak ventilation and intense microbial respiration at depth give rise to a low dissolved oxygen (O 2 ) environment that is thought to be ventilated primarily by the equatorial current system (ECS). The role of mesoscale eddies and vertical mixing as potential pathways of O 2 supply in this region, however, remains poorly known due to sparse observations and coarse model resolution. Using an eddy resolving simulation of ocean circulation and biogeochemistry, we assess the contribution of these processes to the O 2 budget balance and find that vertical mixing of O 2 , which is modulated by the surface wind speed and the vertical shear of the eddying currents, contributes substantially to the replenishment of O 2 in the upper equatorial Pacific thermocline, complementing the advective supply of O 2 by the ECS and meridional circulation at depth. These transport processes vary seasonally in conjunction with the wind: mixing of O 2 into the upper thermocline is strongest during boreal summer and fall when the vertical shear and eddy kinetic energy are intensified. The relationship between eddy activity and the downward mixing of O 2 arises from the modulation of equatorial turbulence by Tropical Instability Waves via their impacts on the vertical shear. This interaction of processes across scales sustains a local pathway of O 2 delivery into the equatorial Pacific interior and highlights the need for adequate observations and models of turbulent mixing and mesoscale processes for understanding and predicting the fate of the tropical Pacific O 2 content in a warmer and more stratified ocean.

Eddy-Mediated↗

DOE OSTI2022

Recent MOOSE Update Slides for a DOE CI visit

This is an updated slide deck for which much of the content has been previously cleared. This slide deck incorporates recent NRIC Virtual Test Bed work with several updates on modeling and simulation of benchmark advanced reactor problems. Note that none of the models or results contained within these slides is proprietary. Many of these have been openly published on the Virtual Test Bed.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

NASA NTRS1981

Remote sensing of soil moisture content over bare field at 1.4 GHz frequency

An algorithm for estimating moisture content of a bare soil from the observed brightness temperature at 1.4 GHz is discussed and applied to a limited data base. The method is based on a radiative transfer model calculation, which has been successfully used in the past to account for many observational results, with some modifications to take into account the effect of surface roughness. Besides the measured brightness temperatures, the three additional inputs required by the method are the effective soil thermodynamic temperature, the precise relation between moisture content and the smooth field brightness temperatures and a pair of parameters related to surface roughness. The procedures of estimating surface roughness parameters and of obtaining moisture content from observed brightness temperature are discussed. The algorithm is applied to observations from truck mounted and airborne radiometers. The estimated moisture contents compare favorably with the observations in the top 2 cm layer.

Wang, J. R.↗

DOE OSTI2025

Smart culture medium optimization for recombinant protein production: Experimental, modeling, and AI/ML-driven strategies

Recombinant protein production (RPP) is central to biotechnology, where recombinant proteins are used as either end products or catalysts in the synthesis of chemicals, fuels, and materials. Among the major cost drivers, culture medium plays a pivotal role in determining protein yield and quality. This review presents a comprehensive perspective on the critical stages of “smart” culture medium optimization: planning, screening, modeling, optimization, and validation. In the planning stage, we examine the nutritional and energetic roles of medium components, including carbon, nitrogen, amino acids, salts, and trace metals, and their impacts on culture parameters such as pH, oxidative state, and osmolality. We highlight the variability in trace metal content due to water sources, culture vessels, and raw materials, which can substantially influence RPP. The screening stage covers Design of Experiments (DoE) approaches, assessing their theoretical basis, implementation, and limitations. For modeling, we describe methods that integrate experimental data to develop predictive models for smart medium formulation. Model-based optimization strategies can then be employed to select optimal media compositions for a given application. The validation stage aims to evaluate model predictions and provide feedback for model training and refinement. Finally, we survey mechanistic and artificial intelligence/machine learning (AI/ML)-driven models as integrated, transformational tools for predictive modeling of bioprocess conditions, nutrient availability, cellular metabolism, and protein quality, with the goal of optimizing culture media to enhance protein yields while reducing costs and environmental impact. We conclude by addressing the challenges of translating laboratory-scale medium optimization to industrial-scale settings and exploring future AI/ML-driven approaches that may overcome current bottlenecks and accelerate medium design for RPP. Overall, this review provides a unified framework for advancing smart medium design in RPP.

Artificial Intelligence/Machine Learning (AI/ML)↗

NASA NTRS2018

Satellite and In Situ Observations for Advancing Global Earth Surface Modelling: A Review

In this paper we review the use of satellite-based remote sensing in combination with in situ data to inform Earth surface modelling. This involves verification and optimization methods that can handle both random and systematic errors and result in effective model improvement for both surface monitoring and prediction applications. The reasons for diverse remote sensing data and products include (i) their complementary areal and temporal coverage, (ii) their diverse and covariant information content, and (iii) their ability to complement in situ observations, which are often sparse and only locally representative. To improve our understanding of the complex behavior of the Earth system at the surface and sub-surface, we need large volumes of data from high-resolution modelling and remote sensing, since the Earth surface exhibits a high degree of heterogeneity and discontinuities in space and time. The spatial and temporal variability of the biosphere, hydrosphere, cryosphere and anthroposphere calls for an increased use of Earth observation (EO) data attaining volumes previously considered prohibitive. We review data availability and discuss recent examples where satellite remote sensing is used to infer observable surface quantities directly or indirectly, with particular emphasis on key parameters necessary for weather and climate prediction. Coordinated high-resolution remote-sensing and modelling/assimilation capabilities for the Earth surface are required to support an international application-focused effort.

Earth observations↗

NASA NTRS1999

Statistics of Cirrus Horizontal Inhomogeneity in the Southern Great Plains

Variability of cloud properties on scales smaller than that of a GCM grid is potentially important both for realistic parameterizations of microphysical processes and for the prediction of the large-scale radiative effects of clouds, have suggested that a simple model of marine stratocumulus variability, based on the assumption of Gaussian variation statistics of cloud depth, can explain the liquid water path histogram shapes observed in Landsat data. In advance of ARM SGP MMCR ice water path climatologies, we have examined aircraft ice water content statistics for cirrus clouds observed over Coffeyville, Kansas during FIRE 2. We find similar associations of histogram shape and cloud cover for these clouds, and we show that a simple modification of the model for cirrus combined with observed mean cloud depths, their standard deviations, and ambient thermodynamic conditions predicts both the histogram shape and cirrus cloud cover fairly well. This suggests that subgrid variability of cloud properties may be similar for vastly different cloud types, and that a universal parameterization of the effects of subgrid variability in GCMs as a function of only a few parameters may be a realistic goal.

Smith, S. A.↗

NASA NTRS2019

The Influence of Redox Conditions on the Seismic Properties of Polycrystalline Olivine

Eight olivine specimens were fabricated by use of a solgel method and hot-pressing at 1200 degrees Centigrade and 300 megapascals (MPa) inside of welded Pt capsules. Each hot-pressed specimen was then recovered, precision ground, and wrapped in Pt, Ni or NiFe foil to vary oxygen fugacity (fO2) during the subsequent forced torsional oscillation measurements. Mechanical testing was conducted at 10 oscillation periods between 1 and 1000 seconds, at a confining pressure of 200 MPa, during a slow staged-cooling from a maximum temperature of 1200 degrees Centigrade down to room temperature. After mechanical testing, each specimen was axially sectioned and EBSD (Electron BackScatter Diffraction) was used for the determination of the representative grain size, and grain size distribution of each sample. In addition, each longitudinal section was mapped via FTIR (Fourier Transform Infrared Spectroscopy) to determine the spatial distribution and concentrations of chemically bound and molecular water. Amongst these eight specimens, chemically bound ‘water’ contents were observed to vary between 0 and 1150 atom parts per million (ppm) H/Si, and molecular water concentrations varied between 0 and 245 atom ppm H/Si. Our forced-oscillation results demonstrate that the measured magnitude of anelastic relaxation within the experimental ‘window’ of oscillation periods is unrelated to the water content. Rather, a relationship was observed between the magnitude of anelastic relaxation and the prevailing redox conditions, which is influenced by the choice of metal sleeving used during the mechanical test. Further, regardless of water content or metal sleeving, each specimen exhibits coupled variations in shear modulus and dissipation within the observational window, indicative of ‘high-temperature background’ behavior, that can be described by a Burgers-type model. During initial fitting of the Burgers models, the unrelaxed shear modulus at a reference temperature of 900°C (elastic unloading/reloading shear modulus G (sub UR)) and the temperature derivative of the unrelaxed shear modulus (dGU/dT), were treated as adjustable parameters. For all Fe-bearing olivine samples we observe deficits of G (sub UR) and increased values of dGU/dT, relative to the expected elastic (anharmonic) behavior for Fo (Forsterite content percentage) (sub 90) olivine. This behavior is indicative of anelastic relaxation occurring at shorter periods than observable within the ‘window’ of oscillation periods used in the mechanical test. Moving towards a comprehensive and seismologically applicable Burgers model, which includes this newly observed effect of redox conditions on anelastic relaxation, we will present our progress on reconciling truly anharmonic and elastic behavior of Fo (sub 90) olivine with our observed forced-oscillation data.

Cline, C. J., II↗

DOE OSTI2025

Dynamic and static corrosion of chromium-alumina refractory in simulated nuclear waste glass

Monofrax® K-3, a chromium–alumina refractory, is widely used in nuclear waste glass melters due to its high durability. However, aggressive vitrification conditions still lead to corrosion that limits melter lifespan. Here, this study investigates two key corrosion modes, subsurface and melt-line corrosion, under static and dynamic conditions, using a custom setup enabling precise control of melt velocity and temperature. Experimental results, interpreted using diffusion-limited dissolution models, show that (i) subsurface corrosion increases by approximately 10% per mm/s increase in melt velocity, while melt-line corrosion remains virtually unaffected, (ii) corrosion rate dependence on temperature is inversely proportional to melt viscosity, and (iii) glass composition affects both corrosion modes similarly, based on Cr 2 O 3 , Al 2 O 3 , and alkali contents. The experimental data also allowed the determination of diffusion coefficients of major dissolving species, which were found to be consistent between the melt-line and subsurface corrosion models, indicating their suitability for future CFD studies.

12 - MGMT OF RADIOACTIVE AND NON-RADIOACTIVE WASTE↗

NASA NTRS2021

Hydrogen Abundance and Distribution on (101955) Bennu

Asteroids were likely a major source of volatiles and water to early Earth. Quantifying the hydration of asteroids is necessary to constrain models of the formation and evolution of the Solar System and the origin of Life on Earth. The OSIRIS-REx (Origins, Spectral Interpretation, Resource Identification, and Security–Regolith Explorer) mission showed that near-Earth asteroid (101955) Bennu contains widespread, abundant hydrated phyllosilicates, indicated by a ubiquitous absorption at ~ 2.7 μm. The objective of this work is to quantify the hydration—that is, the hydrogen content—of phyllosilicates on Bennu's surface and investigate how this hydration varies spatially. We analyse spectral parameters (normalized optical path length, NOPL; effective single-scattering albedo, ESPAT; and Gaussian modeling) computed from the hydrated phyllosilicate absorption band of spatially resolved visible–near-infrared spectra acquired by OVIRS (the OSIRIS-REx Visible and InfraRed Spectrometer). We also computed the same spectral parameters using laboratory-measured spectra of meteorites including CMs, CIs, and the ungrouped C2 Tagish Lake. We estimate the mean hydrogen content of water and hydroxyl groups in hydrated phyllosilicates on Bennu's surface to be 0.71 ± 0.16 wt%. This value is consistent with the hydration range of some aqueously altered meteorites (CMs, C2 Tagish Lake), but not the most aqueously altered group (CIs). The sample collection site of the OSIRIS-REx mission has slightly higher hydrogen content than average. Spatial variations in hydrogen content on Bennu's surface are linked to geomorphology, and may have been partially inherited from its parent body.

A. Praet↗

NASA NTRSDate not supplied

Evaluation of Preliminary Buffet Forcing Function Development based on Wind-Tunnel Tests of Geometrically-similar Models

The current state-of-the-art for launch vehicle buffet load estimation involves wind tunnel testing of highly instrumented rigid models and data processing of experimental unsteady pressure measurements to estimate the fluctuating aerodynamic loads. The model and instrumentation requirements to accomplish this type of testing are significant. The rigid model, in particular, must be built with relatively high geometric fidelity to approximate similar aerodynamic phenomena that will occur during the full-scale vehicle flight. Due to this requirement, several iterative wind tunnel tests are often required during the design maturation of the vehicle. For preliminary buffet load estimation, however, data from previous launch vehicle wind tunnel tests of geometrically similar models can be used to provide initial buffet environment estimates before a high geometric fidelity wind tunnel test has been conducted. In this paper, two components of this preliminary buffet estimation process are described: (1) assembly of buffet forcing functions from multiple data sources and (2) scaling of these buffet forcing functions to geometrically-similar components of a target vehicle configuration. The impacts of these estimation methods on the full-vehicle buffet forcing functions, including their longitudinal distribution along the vehicle, frequency-content at individual stations, and station-to-station coherence, are investigated. Considerations for using these methods to extrapolate wind tunnel data to geometrically similar models are also discussed.

Patrick S Heaney↗

NASA NTRS1995

Hubble Space Telescope far-ultraviolet imaging of M31, M32, and NGC 205

Hubble Space Telescope (HST) Faint Object Camera (FOC) f/48 images of M31, M32, and NGC 205 (field of view 23 sec x 23 sec with 0.45 sec pixel size) are analyzed as observed through the combined UV filters F150W and F130LP. The absolute calibration of the data and the internal disagreement between observed and expected count rates in the UV region lead us to suggest that the filter combination F150W+F130LP suffers from a 5 times degraded UV sensitivity. A corrected efficiency curve is construced using the UV/optical spectral energy distributions of these three galaxies, which is consistent with all of the data analyzed here. Eighty-one individual stars are detected in M31, 10 stars in M32, and 78 stars in NGC 205. Comparisons with other UV images and optical images indicates that these stars are hot, UV-bright stars, even though our corrected efficiency curve suggests that flux from 1200-2450 A contributes only 7% of the counts in M32, 19% in M31, and 60% in NGC 205. The complex nucleus of M31 as seen by Lauer et al. (1993) is confirmed; M32 has a generally smooth appearance and NGC 205 is dominated by a UV-bright, somewhat resolved nucleus. Analysis of these data is done through the new, extensive stellar isochrones of Bertelli et al. (1994) and the population synthesis models of Bressan, Chiosi, and Fagotto (1994). This analysis shows that high-metal stars (Z greater than 0.05) evolve into UV-bright stars (P-EAGB, H-HB, and AGB-manque stars) that are less luminous and cooler but are significantly longer lived than the P-AGB stars produced by stars with Z less than 0.05. Moreover, the proportion of P-EAGB, H-HB, and AGB-manque stars is also a function of age, with older stars of fixed mean metallicity having a higher proportion than younger stars. Hence, with either metallicity or age differences as an interpretation of the line-strength luminosity correlation for ellipticals, the high-metallicity 'tail' of the stellar content of a galaxy can produce far-UV flux in much greater proportion than its actual proportion of galaxy mass. The resulting model of the sources of far-UV flux is inherently composite, with the total UV flux from a stellar population both rapidly increasing and changing its mean spectrum with increasing mean metallicity (or mean age). This model is consistent with several pieces of observational evidence.

Bertola, F.↗

DOE OSTI2023

Organic carbon enables the biotic engineering of beneficial soil structure in Profundihumic and Haplic Ferralsols

We investigated how organic matter may, directly and indirectly, modify the porosity of Ferralsols, that is, deeply weathered soils of the tropics and subtropics. Although empirical and anecdotal evidence suggests that organic matter accumulation may increase porosity, a mechanistic understanding of the processes underlying this beneficial effect is lacking, especially so for Ferralsols. To achieve our end, we leveraged the fact that the Profundihumic qualifier of Ferralsols (PF) is distinguished from Haplic Ferralsols (HF) by both a much larger average carbon content in the first 1 m of soil depth (19 kg C m -3 in PF vs. 10 kg C m -3 in HF) and a significantly lower bulk density (1.05 ± 0.08 kg L -1 in PF vs. 1.21 ± 0.05 kg L -1 in HF). Through exhaustive modelling of carbon – bulk density relationships, we demonstrate that the lower bulk density of PF cannot be satisfactorily explained by a simple dilution effect. Rather, we found that bulk density correlated with carbon content when combined with carbon: nitrogen ratio (r 2 = 0.51), black carbon content (r 2 = 0.75), and Δ 14 C (r 2 =0.81). Total pore space was greater in PF (61± 3%) than in HF (55 ± 2%), but x-ray computed tomography revealed that pore space inside soil aggregates of 4–5 mm diameter does not vary between the studied Ferralsols. We further observed nearly twice as many roots and burrows in PF compared with HF. We thus infer that the mechanism responsible for the increase in porosity is most likely an enhancement of resource availability (e.g., energy, carbon, and nutrients) for the organisms (earthworms, ants, termites, etc.) that physically displace soil particles and promote soil aggregation. As a result of increased resource availability, soil organisms can create especially the mesoscale structural soil features necessary for unrestricted water flow and rapid gas exchange. In conclusion, this insight paves the way for the development of land management technologies to optimize the physical shape and capacity of the soil bioreactor.

54 ENVIRONMENTAL SCIENCES↗

NASA NTRS1994

Relationship between ice water path and downward longwave radiation for clouds optically thin in the infrared: Observations and model calculations

A vertically pointing 3.2-cm radar is used to observe altostratus and cirrus clouds as they pass overhead. Radar reflectivities are used in combination with an empirical Z(sub i)-IWC (ice water content) relationship developed by Sassen (1987) to parameterize IWC, which is then integrated to obtain estimates of ice water path (IWP). The observed dataset is segregated into all-ice and mixed-phase periods using measurements of integrated liquid water paths (LWP) detected by a collocated, dual-channel microwave radiometer. The IWP values for the all ice periods are compared to measurements of infrared (IR) downward fluxes measured by a collocated narrowband (9.95-11.43 microns) IR radiometer, which results in scattergrams representing the observed dependence of IR fluxes on IWP. A two-stream model is used to calculate the infrared fluxes expected from ice clouds with boundary conditions specified by the actual clouds, and similar curves relating IWP and infrared fluxes are obtained. The model and observational results suggest that IWP is one of the primary controls on infrared thermal fluxes for ice clouds.

Uttal, Taneil↗

DOE OSTI2023

Numerical investigations to identify environmental factors for field-scale reactive transport of pathogens at riverbank filtration sites

While induced bank filtration is a proven method for facilitating sustainable drinking water production, it is at risk from surface water contaminations (e.g., pathogens). Induced bank filtration and pathogen transport in groundwater have been studied extensively. However, long-term studies that consider real-world conditions are missing. These conditions include seasonal changes to environmental conditions and waterworks operations. Therefore, to analyze the effect of seasonal changes on the transport of human pathogenic viruses and their indicators in induced bank filtration, concentrations of adenoviruses and pathogen indicators were monitored over 16 months at an active bank filtration plant at the Rhine River, in Düsseldorf (Germany). Based on this data, a 2D groundwater model was created in PFLOTRAN that simulated flow, heat transport, conservative transport of chloride and the resulting electrical conductivity, reactive transport of oxygen and nitrate, and colloid-based transport of coliforms, somatic coliphages, and adenoviruses. The results show that reduced travel time was the key factor determining periods with a low removal of coliforms and somatic coliphages in the aquifer. Travel time was controlled by river level variations during rainy seasons, and the waterworks extraction rates during dry seasons. Further, for adenovirus transport, travel distance in the subsurface appeared to be the key factor, while travel time had no significant impact. Coliform removal increased when the colmation layer permeability decreased, while coliphage and adenovirus removal was unaffected by the colmation layer permeability. Seasonal changes in temperature and oxygen content did not significantly impact the removal of coliphages and adenoviruses in groundwater. Denitrifying conditions correlated with a lowered coliform removal, but the modelling could not establish a connection between denitrifying conditions and coliform removal. Our study showed that removal of pathogens and pathogen indicators at induced bank filtration plants varies greatly in time and space (e.g., for coliforms from 1 to 4 log-levels at 20m travel distance), and that adenovirus transport differs considerably from transport of coliforms and somatic coliphages.

59 BASIC BIOLOGICAL SCIENCES↗

NASA NTRS2006

Observing Ice in Clouds from Space

There are many satellite observations of cloud top properties and the liquid and rain content of clouds, however, we do not yet quantitatively understand the processes that control the water budget of the upper troposphere where ice is the predominant phase, and how these processes are linked to precipitation processes and the radiative energy budget. The ice in clouds in the upper troposphere either melts into rain or is detrained, and persists, as cirrus clouds affecting the hydrological and energy cycle, respectively. Fully modeling the Earth's climate and improving weather and climate forecasts requires accurate satellite measurements of various cloud properties at the temporal and spatial scales of cloud processes. These properties include cloud horizontal and vertical structure, cloud water content and some measure of particle sizes and shapes. The uncertainty in knowledge of these ice characteristics is reflected in the large discrepancies in model simulations of the upper tropospheric water budget. Model simulations are sensitive to the partition of ice between precipitation and outflow processes, i.e., to the parameterization of ice clouds and ice processes. One barrier to achieving accurate global ice cloud properties is the lack of adequate observations at millimeter and submillimeter wavelengths (183-874 GHz). Recent advances in instrumentation have allowed for the development and implementation of an airborne submillimeter-wave radiometer. The brightness temperatures at these frequencies are especially sensitive to cirrus ice particle sizes (because they are comparable to the wavelength). This allows for more accurate ice water path estimates when multiple channels are used to probe into the cloud layers. Further, submillimeter wavelengths offer simplicity in the retrieval algorithms because they do not probe into the liquid and near surface portions of clouds, thus requiring only one term of the radiative transfer equation (ice scattering) to relate brightness temperatures to ice. The next step is a satellite mission designed to acquire global Earth radiance measurements in the submillimeter-wave region, thus bridging the measurement gap between microwave sounders and shorter-wavelength infrared and visible sensors. This presentation provides scientific justification and an approach to measuring ice water path and particle size from a satellite platform that spans a range encompassing both the hydrologically active and radiatively active components of cloud systems.

Ackerman, S.↗

NASA NTRS2007

Current Status and Future Development of Structuring and Modeling Intelligent Appearing Motion

The two topics covered by this symposium were intelligent appearing motion and Virtual Environments (VE). Both of these are broad research areas with enough content to fill large conferences. Their intersection has become important due to conceptual and technological advances enabling the introduction of intelligent appearing motion into Virtual Environments. This union brings new integration challenges and opportunities, some of which were examined at this symposium. This chapter was inspired by the contributions of several of the conference participants, but is not a complete review of all presentations. It will hopefully serve as a basis for formulating a new approach to the understanding of motion within VE

Alexander, Thomas↗

DOE OSTI2023

Biomass Feedstock Flow Modeling at Exascale

Variable biomass feedstock handling in hoppers and screw conveyors can cause upstream failures and disrupt downstream conversion operations. Understanding how particle size, shape, and moisture content affect feedstock flowability is important for efficient biorefinery operation. We present the use of our open-source discrete element method (DEM) solver for predicting flows in large scale hoppers and assess its performance on state-of-the-art high performance computing platforms that use heterogenous computing architectures.

bioenergy↗